HEADER VIRAL PROTEIN 03-SEP-23 8U1V TITLE STRUCTURE OF NOROVIRUS (HU/GII.4/SYDNEY/NSW0514/2012/AU) PROTEASE IN TITLE 2 THE LIGAND-FREE STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDASE C37; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 3.4.22.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOROVIRUS HU/GII.4/SYDNEY/NSW0514/2012/AU; SOURCE 3 ORGANISM_TAXID: 1241973; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEASE, 3-CHYMOTRYPSIN-LIKE PROTEASE, 3CL-PRO, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.R.ERUERA,A.C.CAMPBELL,K.L.KRAUSE REVDAT 1 31-JAN-24 8U1V 0 JRNL AUTH A.R.ERUERA,A.M.MCSWEENEY,G.M.MCKENZIE-GOLDSMITH, JRNL AUTH 2 H.K.OPEL-READING,S.X.THOMAS,A.C.CAMPBELL,L.STUBBING,A.SIOW, JRNL AUTH 3 J.G.HUBERT,M.A.BRIMBLE,V.K.WARD,K.L.KRAUSE JRNL TITL CRYSTAL STRUCTURE OF INHIBITOR-BOUND GII.4 SYDNEY 2012 JRNL TITL 2 NOROVIRUS 3C-LIKE PROTEASE. JRNL REF VIRUSES V. 15 2023 JRNL REFN ESSN 1999-4915 JRNL PMID 38005879 JRNL DOI 10.3390/V15112202 REMARK 2 REMARK 2 RESOLUTION. 2.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2-3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 21581 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 647 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.5400 - 4.7700 1.00 4398 135 0.1768 0.2058 REMARK 3 2 4.7700 - 3.7900 1.00 4254 132 0.1626 0.1678 REMARK 3 3 3.7900 - 3.3100 1.00 4223 131 0.2015 0.2146 REMARK 3 4 3.3100 - 3.0100 1.00 4212 130 0.2504 0.2816 REMARK 3 5 3.0100 - 2.7900 0.92 3847 119 0.2968 0.3414 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5128 REMARK 3 ANGLE : 0.483 6987 REMARK 3 CHIRALITY : 0.044 809 REMARK 3 PLANARITY : 0.005 892 REMARK 3 DIHEDRAL : 12.961 1772 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 3 THROUGH 181) REMARK 3 ORIGIN FOR THE GROUP (A): 15.0490 10.3514 9.2668 REMARK 3 T TENSOR REMARK 3 T11: 0.3633 T22: 0.3144 REMARK 3 T33: 0.2922 T12: 0.0096 REMARK 3 T13: -0.0215 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.6739 L22: 0.5320 REMARK 3 L33: 0.2850 L12: -0.2587 REMARK 3 L13: 0.3621 L23: 0.0441 REMARK 3 S TENSOR REMARK 3 S11: 0.0631 S12: 0.0466 S13: 0.0011 REMARK 3 S21: 0.0540 S22: -0.0531 S23: -0.0835 REMARK 3 S31: 0.0709 S32: -0.0409 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 1 THROUGH 175) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7983 34.4766 -12.0871 REMARK 3 T TENSOR REMARK 3 T11: 0.3145 T22: 0.3710 REMARK 3 T33: 0.3319 T12: -0.0412 REMARK 3 T13: -0.0186 T23: 0.0580 REMARK 3 L TENSOR REMARK 3 L11: 1.1365 L22: 0.3511 REMARK 3 L33: 0.2874 L12: -0.1303 REMARK 3 L13: -0.1282 L23: -0.2728 REMARK 3 S TENSOR REMARK 3 S11: -0.0767 S12: 0.0949 S13: 0.2296 REMARK 3 S21: 0.0797 S22: 0.0337 S23: -0.1433 REMARK 3 S31: 0.1098 S32: -0.0756 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 3 THROUGH 172) REMARK 3 ORIGIN FOR THE GROUP (A): -21.6045 12.2169 9.9942 REMARK 3 T TENSOR REMARK 3 T11: 0.4252 T22: 0.4102 REMARK 3 T33: 0.4048 T12: -0.0132 REMARK 3 T13: 0.0221 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 0.1887 L22: 0.6983 REMARK 3 L33: 0.1866 L12: -0.3593 REMARK 3 L13: 0.0246 L23: -0.0793 REMARK 3 S TENSOR REMARK 3 S11: 0.0927 S12: -0.0251 S13: -0.0420 REMARK 3 S21: 0.0575 S22: 0.0664 S23: 0.1121 REMARK 3 S31: 0.0577 S32: 0.0281 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 1 THROUGH 172) REMARK 3 ORIGIN FOR THE GROUP (A): -15.7462 43.1194 12.6230 REMARK 3 T TENSOR REMARK 3 T11: 0.2817 T22: 0.2488 REMARK 3 T33: 0.3798 T12: 0.0405 REMARK 3 T13: -0.0417 T23: -0.0302 REMARK 3 L TENSOR REMARK 3 L11: 0.6234 L22: 0.6764 REMARK 3 L33: 0.3371 L12: 0.0368 REMARK 3 L13: -0.0470 L23: -0.3449 REMARK 3 S TENSOR REMARK 3 S11: -0.0062 S12: -0.0969 S13: 0.1353 REMARK 3 S21: -0.0633 S22: 0.1099 S23: 0.0251 REMARK 3 S31: -0.0599 S32: 0.1182 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8U1V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1000277158. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95364 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21735 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.790 REMARK 200 RESOLUTION RANGE LOW (A) : 48.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.15600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 1.25700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% W/V PEG 3350, 8% TACSIMATE PH 5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.64650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.64650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 56.41350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 80.43450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 56.41350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 80.43450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.64650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 56.41350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 80.43450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 47.64650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 56.41350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 80.43450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 202 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 PRO A 2 REMARK 465 GLY B 176 REMARK 465 GLU B 177 REMARK 465 ALA B 178 REMARK 465 THR B 179 REMARK 465 LEU B 180 REMARK 465 GLU B 181 REMARK 465 ALA C 1 REMARK 465 PRO C 2 REMARK 465 GLY C 173 REMARK 465 SER C 174 REMARK 465 GLU C 175 REMARK 465 GLY C 176 REMARK 465 GLU C 177 REMARK 465 ALA C 178 REMARK 465 THR C 179 REMARK 465 LEU C 180 REMARK 465 GLU C 181 REMARK 465 GLY D 173 REMARK 465 SER D 174 REMARK 465 GLU D 175 REMARK 465 GLY D 176 REMARK 465 GLU D 177 REMARK 465 ALA D 178 REMARK 465 THR D 179 REMARK 465 LEU D 180 REMARK 465 GLU D 181 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 34 CG CD OE1 NE2 REMARK 470 LYS A 37 CG CD CE NZ REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 GLN A 48 CG CD OE1 NE2 REMARK 470 LYS A 62 CG CD CE NZ REMARK 470 GLU A 74 CG CD OE1 OE2 REMARK 470 LYS A 128 CG CD CE NZ REMARK 470 LYS A 146 CG CD CE NZ REMARK 470 ARG A 147 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 149 CG OD1 ND2 REMARK 470 ASP A 150 CG OD1 OD2 REMARK 470 GLU A 175 CG CD OE1 OE2 REMARK 470 LYS B 37 CG CD CE NZ REMARK 470 GLU B 38 CG CD OE1 OE2 REMARK 470 LYS B 45 CG CD CE NZ REMARK 470 ARG B 57 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 62 CG CD CE NZ REMARK 470 GLU B 75 CG CD OE1 OE2 REMARK 470 GLU B 79 CG CD OE1 OE2 REMARK 470 GLU B 93 CG CD OE1 OE2 REMARK 470 LYS B 108 CG CD CE NZ REMARK 470 GLN B 110 CG CD OE1 NE2 REMARK 470 LYS B 128 CG CD CE NZ REMARK 470 ARG B 147 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 162 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 175 CG CD OE1 OE2 REMARK 470 GLN C 34 CG CD OE1 NE2 REMARK 470 SER C 35 OG REMARK 470 LYS C 37 CG CD CE NZ REMARK 470 LYS C 45 CG CD CE NZ REMARK 470 LYS C 62 CG CD CE NZ REMARK 470 ASP C 67 CG OD1 OD2 REMARK 470 ILE C 72 CG1 CG2 CD1 REMARK 470 GLU C 74 CG CD OE1 OE2 REMARK 470 GLU C 75 CG CD OE1 OE2 REMARK 470 ASN C 126 CG OD1 ND2 REMARK 470 LYS C 128 CG CD CE NZ REMARK 470 MET C 130 CG SD CE REMARK 470 ASP C 131 CG OD1 OD2 REMARK 470 LYS C 146 CG CD CE NZ REMARK 470 ASN C 149 CG OD1 ND2 REMARK 470 ASP C 150 CG OD1 OD2 REMARK 470 SER D 4 O REMARK 470 SER D 23 OG REMARK 470 GLN D 34 CG CD OE1 NE2 REMARK 470 GLU D 38 CG CD OE1 OE2 REMARK 470 LYS D 45 CG CD CE NZ REMARK 470 ARG D 59 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 62 CG CD CE NZ REMARK 470 ILE D 64 CG1 CG2 CD1 REMARK 470 GLU D 75 CG CD OE1 OE2 REMARK 470 LYS D 108 CG CD CE NZ REMARK 470 GLN D 110 CG CD OE1 NE2 REMARK 470 ASN D 126 CG OD1 ND2 REMARK 470 ASN D 149 CG OD1 ND2 REMARK 470 ARG D 162 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 110 -144.21 50.77 REMARK 500 ARG A 112 -167.31 -128.50 REMARK 500 ASN A 126 1.17 -68.70 REMARK 500 THR A 158 -30.90 -132.53 REMARK 500 LEU B 122 44.57 -99.94 REMARK 500 LYS C 37 -34.18 -132.60 REMARK 500 SER C 125 -147.46 59.26 REMARK 500 ASP C 131 -1.36 65.93 REMARK 500 THR C 171 -168.99 -112.02 REMARK 500 PHE D 12 108.22 -165.23 REMARK 500 PRO D 33 98.30 -69.43 REMARK 500 LEU D 122 47.21 -102.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8U1W RELATED DB: PDB DBREF 8U1V A 1 181 UNP K4L8Z7 K4L8Z7_9CALI 1009 1189 DBREF 8U1V B 1 181 UNP K4L8Z7 K4L8Z7_9CALI 1009 1189 DBREF 8U1V C 1 181 UNP K4L8Z7 K4L8Z7_9CALI 1009 1189 DBREF 8U1V D 1 181 UNP K4L8Z7 K4L8Z7_9CALI 1009 1189 SEQRES 1 A 181 ALA PRO PRO SER ILE TRP SER ARG ILE VAL ASN PHE GLY SEQRES 2 A 181 SER GLY TRP GLY PHE TRP VAL SER PRO SER LEU PHE ILE SEQRES 3 A 181 THR SER THR HIS VAL ILE PRO GLN SER ALA LYS GLU PHE SEQRES 4 A 181 PHE GLY VAL PRO ILE LYS GLN ILE GLN ILE HIS LYS SER SEQRES 5 A 181 GLY GLU PHE CYS ARG LEU ARG PHE PRO LYS PRO ILE ARG SEQRES 6 A 181 THR ASP VAL THR GLY MET ILE LEU GLU GLU GLY ALA PRO SEQRES 7 A 181 GLU GLY THR VAL ALA THR LEU LEU ILE LYS ARG PRO THR SEQRES 8 A 181 GLY GLU LEU MET PRO LEU ALA ALA ARG MET GLY THR HIS SEQRES 9 A 181 ALA THR MET LYS ILE GLN GLY ARG THR VAL GLY GLY GLN SEQRES 10 A 181 MET GLY MET LEU LEU THR GLY SER ASN ALA LYS SER MET SEQRES 11 A 181 ASP LEU GLY THR THR PRO GLY ASP CYS GLY CYS PRO TYR SEQRES 12 A 181 ILE TYR LYS ARG GLY ASN ASP TYR VAL VAL ILE GLY VAL SEQRES 13 A 181 HIS THR ALA ALA ALA ARG GLY GLY ASN THR VAL ILE CYS SEQRES 14 A 181 ALA THR GLN GLY SER GLU GLY GLU ALA THR LEU GLU SEQRES 1 B 181 ALA PRO PRO SER ILE TRP SER ARG ILE VAL ASN PHE GLY SEQRES 2 B 181 SER GLY TRP GLY PHE TRP VAL SER PRO SER LEU PHE ILE SEQRES 3 B 181 THR SER THR HIS VAL ILE PRO GLN SER ALA LYS GLU PHE SEQRES 4 B 181 PHE GLY VAL PRO ILE LYS GLN ILE GLN ILE HIS LYS SER SEQRES 5 B 181 GLY GLU PHE CYS ARG LEU ARG PHE PRO LYS PRO ILE ARG SEQRES 6 B 181 THR ASP VAL THR GLY MET ILE LEU GLU GLU GLY ALA PRO SEQRES 7 B 181 GLU GLY THR VAL ALA THR LEU LEU ILE LYS ARG PRO THR SEQRES 8 B 181 GLY GLU LEU MET PRO LEU ALA ALA ARG MET GLY THR HIS SEQRES 9 B 181 ALA THR MET LYS ILE GLN GLY ARG THR VAL GLY GLY GLN SEQRES 10 B 181 MET GLY MET LEU LEU THR GLY SER ASN ALA LYS SER MET SEQRES 11 B 181 ASP LEU GLY THR THR PRO GLY ASP CYS GLY CYS PRO TYR SEQRES 12 B 181 ILE TYR LYS ARG GLY ASN ASP TYR VAL VAL ILE GLY VAL SEQRES 13 B 181 HIS THR ALA ALA ALA ARG GLY GLY ASN THR VAL ILE CYS SEQRES 14 B 181 ALA THR GLN GLY SER GLU GLY GLU ALA THR LEU GLU SEQRES 1 C 181 ALA PRO PRO SER ILE TRP SER ARG ILE VAL ASN PHE GLY SEQRES 2 C 181 SER GLY TRP GLY PHE TRP VAL SER PRO SER LEU PHE ILE SEQRES 3 C 181 THR SER THR HIS VAL ILE PRO GLN SER ALA LYS GLU PHE SEQRES 4 C 181 PHE GLY VAL PRO ILE LYS GLN ILE GLN ILE HIS LYS SER SEQRES 5 C 181 GLY GLU PHE CYS ARG LEU ARG PHE PRO LYS PRO ILE ARG SEQRES 6 C 181 THR ASP VAL THR GLY MET ILE LEU GLU GLU GLY ALA PRO SEQRES 7 C 181 GLU GLY THR VAL ALA THR LEU LEU ILE LYS ARG PRO THR SEQRES 8 C 181 GLY GLU LEU MET PRO LEU ALA ALA ARG MET GLY THR HIS SEQRES 9 C 181 ALA THR MET LYS ILE GLN GLY ARG THR VAL GLY GLY GLN SEQRES 10 C 181 MET GLY MET LEU LEU THR GLY SER ASN ALA LYS SER MET SEQRES 11 C 181 ASP LEU GLY THR THR PRO GLY ASP CYS GLY CYS PRO TYR SEQRES 12 C 181 ILE TYR LYS ARG GLY ASN ASP TYR VAL VAL ILE GLY VAL SEQRES 13 C 181 HIS THR ALA ALA ALA ARG GLY GLY ASN THR VAL ILE CYS SEQRES 14 C 181 ALA THR GLN GLY SER GLU GLY GLU ALA THR LEU GLU SEQRES 1 D 181 ALA PRO PRO SER ILE TRP SER ARG ILE VAL ASN PHE GLY SEQRES 2 D 181 SER GLY TRP GLY PHE TRP VAL SER PRO SER LEU PHE ILE SEQRES 3 D 181 THR SER THR HIS VAL ILE PRO GLN SER ALA LYS GLU PHE SEQRES 4 D 181 PHE GLY VAL PRO ILE LYS GLN ILE GLN ILE HIS LYS SER SEQRES 5 D 181 GLY GLU PHE CYS ARG LEU ARG PHE PRO LYS PRO ILE ARG SEQRES 6 D 181 THR ASP VAL THR GLY MET ILE LEU GLU GLU GLY ALA PRO SEQRES 7 D 181 GLU GLY THR VAL ALA THR LEU LEU ILE LYS ARG PRO THR SEQRES 8 D 181 GLY GLU LEU MET PRO LEU ALA ALA ARG MET GLY THR HIS SEQRES 9 D 181 ALA THR MET LYS ILE GLN GLY ARG THR VAL GLY GLY GLN SEQRES 10 D 181 MET GLY MET LEU LEU THR GLY SER ASN ALA LYS SER MET SEQRES 11 D 181 ASP LEU GLY THR THR PRO GLY ASP CYS GLY CYS PRO TYR SEQRES 12 D 181 ILE TYR LYS ARG GLY ASN ASP TYR VAL VAL ILE GLY VAL SEQRES 13 D 181 HIS THR ALA ALA ALA ARG GLY GLY ASN THR VAL ILE CYS SEQRES 14 D 181 ALA THR GLN GLY SER GLU GLY GLU ALA THR LEU GLU FORMUL 5 HOH *9(H2 O) HELIX 1 AA1 SER A 4 SER A 7 5 4 HELIX 2 AA2 HIS A 30 ILE A 32 5 3 HELIX 3 AA3 LYS A 45 ILE A 47 5 3 HELIX 4 AA4 THR A 123 SER A 129 5 7 HELIX 5 AA5 THR A 135 CYS A 139 5 5 HELIX 6 AA6 PRO B 2 ARG B 8 1 7 HELIX 7 AA7 HIS B 30 ILE B 32 5 3 HELIX 8 AA8 LYS B 45 ILE B 47 5 3 HELIX 9 AA9 ILE C 5 SER C 7 5 3 HELIX 10 AB1 HIS C 30 ILE C 32 5 3 HELIX 11 AB2 PRO C 43 ILE C 47 5 5 HELIX 12 AB3 GLY C 124 LYS C 128 5 5 HELIX 13 AB4 PRO D 2 SER D 7 1 6 HELIX 14 AB5 HIS D 30 ILE D 32 5 3 HELIX 15 AB6 LYS D 45 ILE D 47 5 3 SHEET 1 AA1 5 ILE A 9 PHE A 12 0 SHEET 2 AA1 5 GLY A 15 TRP A 19 -1 O GLY A 15 N PHE A 12 SHEET 3 AA1 5 LEU A 24 SER A 28 -1 O ILE A 26 N PHE A 18 SHEET 4 AA1 5 PHE A 55 ARG A 59 -1 O CYS A 56 N THR A 27 SHEET 5 AA1 5 GLN A 48 SER A 52 -1 N HIS A 50 O ARG A 57 SHEET 1 AA2 2 GLU A 38 PHE A 39 0 SHEET 2 AA2 2 VAL A 42 PRO A 43 -1 O VAL A 42 N PHE A 39 SHEET 1 AA3 8 ILE A 72 LEU A 73 0 SHEET 2 AA3 8 ASP A 150 ALA A 160 1 O VAL A 153 N ILE A 72 SHEET 3 AA3 8 THR A 166 ALA A 170 -1 O ALA A 170 N VAL A 156 SHEET 4 AA3 8 ARG A 112 LEU A 121 -1 N GLN A 117 O CYS A 169 SHEET 5 AA3 8 LEU A 94 ILE A 109 -1 N GLY A 102 O MET A 118 SHEET 6 AA3 8 VAL A 82 LYS A 88 -1 N LEU A 85 O LEU A 97 SHEET 7 AA3 8 PRO A 142 ARG A 147 -1 O ILE A 144 N THR A 84 SHEET 8 AA3 8 ASP A 150 ALA A 160 -1 O GLY A 155 N TYR A 143 SHEET 1 AA4 5 ILE B 9 PHE B 12 0 SHEET 2 AA4 5 GLY B 15 TRP B 19 -1 O GLY B 15 N PHE B 12 SHEET 3 AA4 5 LEU B 24 SER B 28 -1 O ILE B 26 N PHE B 18 SHEET 4 AA4 5 PHE B 55 ARG B 59 -1 O CYS B 56 N THR B 27 SHEET 5 AA4 5 GLN B 48 SER B 52 -1 N HIS B 50 O ARG B 57 SHEET 1 AA5 2 GLU B 38 PHE B 39 0 SHEET 2 AA5 2 VAL B 42 PRO B 43 -1 O VAL B 42 N PHE B 39 SHEET 1 AA6 8 ILE B 72 LEU B 73 0 SHEET 2 AA6 8 ASP B 150 ALA B 160 1 O VAL B 153 N ILE B 72 SHEET 3 AA6 8 THR B 166 ALA B 170 -1 O ILE B 168 N ALA B 159 SHEET 4 AA6 8 ARG B 112 LEU B 121 -1 N GLN B 117 O CYS B 169 SHEET 5 AA6 8 LEU B 94 ILE B 109 -1 N GLY B 102 O MET B 118 SHEET 6 AA6 8 VAL B 82 LYS B 88 -1 N LEU B 85 O LEU B 97 SHEET 7 AA6 8 PRO B 142 ARG B 147 -1 O ILE B 144 N THR B 84 SHEET 8 AA6 8 ASP B 150 ALA B 160 -1 O VAL B 152 N TYR B 145 SHEET 1 AA7 5 ILE C 9 PHE C 12 0 SHEET 2 AA7 5 GLY C 15 TRP C 19 -1 O GLY C 15 N PHE C 12 SHEET 3 AA7 5 LEU C 24 SER C 28 -1 O ILE C 26 N PHE C 18 SHEET 4 AA7 5 PHE C 55 ARG C 59 -1 O CYS C 56 N THR C 27 SHEET 5 AA7 5 GLN C 48 SER C 52 -1 N GLN C 48 O ARG C 59 SHEET 1 AA8 8 ILE C 72 LEU C 73 0 SHEET 2 AA8 8 ASP C 150 ALA C 160 1 O VAL C 153 N ILE C 72 SHEET 3 AA8 8 THR C 166 ALA C 170 -1 O ALA C 170 N VAL C 156 SHEET 4 AA8 8 ARG C 112 LEU C 121 -1 N GLY C 119 O VAL C 167 SHEET 5 AA8 8 LEU C 94 ILE C 109 -1 N GLY C 102 O MET C 118 SHEET 6 AA8 8 VAL C 82 LYS C 88 -1 N LEU C 85 O LEU C 97 SHEET 7 AA8 8 PRO C 142 ARG C 147 -1 O ILE C 144 N THR C 84 SHEET 8 AA8 8 ASP C 150 ALA C 160 -1 O ASP C 150 N ARG C 147 SHEET 1 AA9 5 ILE D 9 PHE D 12 0 SHEET 2 AA9 5 GLY D 15 SER D 21 -1 O GLY D 15 N PHE D 12 SHEET 3 AA9 5 LEU D 24 SER D 28 -1 O ILE D 26 N PHE D 18 SHEET 4 AA9 5 PHE D 55 ARG D 59 -1 O LEU D 58 N PHE D 25 SHEET 5 AA9 5 GLN D 48 SER D 52 -1 N HIS D 50 O ARG D 57 SHEET 1 AB1 2 GLU D 38 PHE D 39 0 SHEET 2 AB1 2 VAL D 42 PRO D 43 -1 O VAL D 42 N PHE D 39 SHEET 1 AB2 8 ILE D 72 LEU D 73 0 SHEET 2 AB2 8 ASP D 150 ALA D 160 1 O VAL D 153 N ILE D 72 SHEET 3 AB2 8 THR D 166 ALA D 170 -1 O ILE D 168 N ALA D 159 SHEET 4 AB2 8 ARG D 112 LEU D 121 -1 N GLN D 117 O CYS D 169 SHEET 5 AB2 8 LEU D 94 ILE D 109 -1 N GLY D 102 O MET D 118 SHEET 6 AB2 8 VAL D 82 LYS D 88 -1 N ILE D 87 O MET D 95 SHEET 7 AB2 8 PRO D 142 ARG D 147 -1 O ILE D 144 N THR D 84 SHEET 8 AB2 8 ASP D 150 ALA D 160 -1 O ILE D 154 N TYR D 143 CRYST1 112.827 160.869 95.293 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008863 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006216 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010494 0.00000