HEADER LIGASE 06-SEP-23 8U2R TITLE CRYSTAL STRUCTURE OF ACETYL-COENZYME A SYNTHETASE FROM LEISHMANIA TITLE 2 INFANTUM (ETHYL AMP BOUND) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYL-COENZYME A SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 2,3-DIHYDRO-2,3-DIHYDROXYBENZOATE DEHYDROGENASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA INFANTUM; SOURCE 3 ORGANISM_TAXID: 5671; SOURCE 4 GENE: LINJ_23_0580; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: LEINA.00629.B.B1 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, LIGASE, ACETYL-COENZYME A SYNTHETASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE,SEATTLE AUTHOR 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 1 13-SEP-23 8U2R 0 JRNL AUTH E.L.WOODWARD,S.LOVELL,L.LIU,K.P.BATTAILE JRNL TITL CRYSTAL STRUCTURE OF ACETYL-COENZYME A SYNTHETASE FROM JRNL TITL 2 LEISHMANIA INFANTUM (ETHYL AMP BOUND) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21RC1_4933: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.050 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 96681 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 4819 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.8400 - 4.8000 1.00 3315 168 0.1626 0.1571 REMARK 3 2 4.8000 - 3.8200 1.00 3173 166 0.1221 0.1655 REMARK 3 3 3.8200 - 3.3400 1.00 3130 168 0.1410 0.1743 REMARK 3 4 3.3400 - 3.0300 1.00 3131 143 0.1573 0.1669 REMARK 3 5 3.0300 - 2.8200 1.00 3077 163 0.1545 0.1584 REMARK 3 6 2.8200 - 2.6500 1.00 3072 170 0.1478 0.1571 REMARK 3 7 2.6500 - 2.5200 1.00 3088 173 0.1485 0.1818 REMARK 3 8 2.5200 - 2.4100 1.00 3055 183 0.1421 0.1659 REMARK 3 9 2.4100 - 2.3100 1.00 3017 171 0.1401 0.1837 REMARK 3 10 2.3100 - 2.2400 1.00 3107 151 0.1409 0.1613 REMARK 3 11 2.2400 - 2.1700 1.00 3060 160 0.1433 0.1494 REMARK 3 12 2.1700 - 2.1000 1.00 3012 161 0.1399 0.1666 REMARK 3 13 2.1000 - 2.0500 1.00 3095 140 0.1549 0.1819 REMARK 3 14 2.0500 - 2.0000 1.00 3047 155 0.1526 0.1997 REMARK 3 15 2.0000 - 1.9500 1.00 3040 149 0.1485 0.1669 REMARK 3 16 1.9500 - 1.9100 1.00 3052 166 0.1451 0.1724 REMARK 3 17 1.9100 - 1.8700 1.00 3057 159 0.1557 0.1990 REMARK 3 18 1.8700 - 1.8400 1.00 3023 161 0.1513 0.1982 REMARK 3 19 1.8400 - 1.8000 1.00 3036 173 0.1587 0.1914 REMARK 3 20 1.8000 - 1.7700 1.00 3009 178 0.1613 0.1802 REMARK 3 21 1.7700 - 1.7500 1.00 3049 147 0.1723 0.1892 REMARK 3 22 1.7500 - 1.7200 1.00 3038 148 0.1797 0.1955 REMARK 3 23 1.7200 - 1.6900 1.00 3022 150 0.1895 0.2395 REMARK 3 24 1.6900 - 1.6700 1.00 3039 169 0.1921 0.2283 REMARK 3 25 1.6700 - 1.6500 1.00 3036 145 0.2013 0.2241 REMARK 3 26 1.6500 - 1.6300 1.00 3005 183 0.2027 0.2147 REMARK 3 27 1.6300 - 1.6100 1.00 3017 140 0.2121 0.2378 REMARK 3 28 1.6100 - 1.5900 1.00 3064 160 0.2235 0.2618 REMARK 3 29 1.5900 - 1.5700 1.00 3053 141 0.2324 0.3230 REMARK 3 30 1.5700 - 1.5500 1.00 2943 178 0.2417 0.2852 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5387 REMARK 3 ANGLE : 0.942 7343 REMARK 3 CHIRALITY : 0.059 803 REMARK 3 PLANARITY : 0.010 942 REMARK 3 DIHEDRAL : 14.064 1944 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.2330 -8.6258 -28.2386 REMARK 3 T TENSOR REMARK 3 T11: 0.2834 T22: 0.2799 REMARK 3 T33: 0.2953 T12: 0.0764 REMARK 3 T13: 0.0436 T23: -0.0661 REMARK 3 L TENSOR REMARK 3 L11: 1.7314 L22: 1.6050 REMARK 3 L33: 1.6974 L12: 0.4146 REMARK 3 L13: 0.5817 L23: 0.1586 REMARK 3 S TENSOR REMARK 3 S11: -0.0530 S12: 0.0788 S13: -0.0982 REMARK 3 S21: -0.1941 S22: -0.0320 S23: -0.2160 REMARK 3 S31: 0.1853 S32: 0.1589 S33: 0.0514 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 257 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.0127 -0.0671 -16.3797 REMARK 3 T TENSOR REMARK 3 T11: 0.1740 T22: 0.2222 REMARK 3 T33: 0.2346 T12: -0.0040 REMARK 3 T13: -0.0122 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 0.9616 L22: 0.7461 REMARK 3 L33: 0.8732 L12: 0.0465 REMARK 3 L13: -0.1102 L23: 0.0229 REMARK 3 S TENSOR REMARK 3 S11: 0.0338 S12: 0.0868 S13: 0.0005 REMARK 3 S21: -0.0600 S22: -0.0113 S23: 0.1341 REMARK 3 S31: 0.0186 S32: -0.1591 S33: -0.0167 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 258 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3925 2.0816 -10.7886 REMARK 3 T TENSOR REMARK 3 T11: 0.1662 T22: 0.1525 REMARK 3 T33: 0.1751 T12: 0.0000 REMARK 3 T13: 0.0040 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 1.0476 L22: 0.7596 REMARK 3 L33: 0.8187 L12: 0.0670 REMARK 3 L13: 0.0291 L23: 0.0844 REMARK 3 S TENSOR REMARK 3 S11: 0.0378 S12: -0.0068 S13: 0.0121 REMARK 3 S21: 0.0367 S22: -0.0182 S23: 0.0297 REMARK 3 S31: 0.0187 S32: -0.0283 S33: -0.0207 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 460 THROUGH 551 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.8332 7.6482 -32.3838 REMARK 3 T TENSOR REMARK 3 T11: 0.2603 T22: 0.2299 REMARK 3 T33: 0.1966 T12: 0.0237 REMARK 3 T13: 0.0242 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 1.4053 L22: 0.9100 REMARK 3 L33: 1.5949 L12: -0.0149 REMARK 3 L13: 0.4030 L23: -0.1535 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: 0.1838 S13: 0.0867 REMARK 3 S21: -0.2399 S22: 0.0089 S23: -0.0584 REMARK 3 S31: -0.1574 S32: 0.0214 S33: -0.0158 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 552 THROUGH 604 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.6350 21.8447 -22.9699 REMARK 3 T TENSOR REMARK 3 T11: 0.3279 T22: 0.2268 REMARK 3 T33: 0.2367 T12: 0.0269 REMARK 3 T13: 0.0071 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 1.4504 L22: 1.9960 REMARK 3 L33: 1.1658 L12: -1.0499 REMARK 3 L13: -0.8701 L23: 1.5346 REMARK 3 S TENSOR REMARK 3 S11: 0.1806 S12: 0.1534 S13: 0.0980 REMARK 3 S21: -0.3646 S22: -0.1944 S23: -0.0060 REMARK 3 S31: -0.3259 S32: 0.0009 S33: 0.0033 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 605 THROUGH 664 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.4991 34.7686 -15.8239 REMARK 3 T TENSOR REMARK 3 T11: 0.3612 T22: 0.2186 REMARK 3 T33: 0.2238 T12: -0.0068 REMARK 3 T13: 0.0023 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 2.5611 L22: 2.2514 REMARK 3 L33: 2.2190 L12: 0.0981 REMARK 3 L13: -0.2880 L23: 0.2706 REMARK 3 S TENSOR REMARK 3 S11: 0.1392 S12: 0.2233 S13: 0.1884 REMARK 3 S21: -0.2945 S22: -0.2008 S23: 0.1670 REMARK 3 S31: -0.5072 S32: 0.1889 S33: 0.0623 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 665 THROUGH 703 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0449 39.8055 -24.9848 REMARK 3 T TENSOR REMARK 3 T11: 0.7700 T22: 0.6232 REMARK 3 T33: 0.4824 T12: -0.1032 REMARK 3 T13: 0.2417 T23: -0.0271 REMARK 3 L TENSOR REMARK 3 L11: 1.8652 L22: 2.1827 REMARK 3 L33: 4.4736 L12: 0.1075 REMARK 3 L13: -0.5724 L23: 0.2099 REMARK 3 S TENSOR REMARK 3 S11: 0.4539 S12: 0.2668 S13: 0.4134 REMARK 3 S21: -0.9520 S22: -0.0179 S23: -0.5291 REMARK 3 S31: -0.5943 S32: 0.6034 S33: -0.2886 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8U2R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1000277128. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 96781 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 46.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 13.60 REMARK 200 R MERGE FOR SHELL (I) : 1.64200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: JCSG+ B4: 10% (W/V) PEG 8000, 8% (V/V) REMARK 280 ETHYLENE GLYCOL, 100 MM HEPES PH 7.5. LEINA.00629.B.B1.PW39174 REMARK 280 AT 20 MG/ML. PLATE 13157 WELL B4 DROP 3. PUCK: PSL-1311, CRYO: REMARK 280 20% PEG 200 + 80% CRYSTALLANT. 2MM ETHYL AMP ADDED PRIOR TO REMARK 280 CRYSTALLIZATION., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.46300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.52800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.07700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.52800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.46300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.07700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 ASN A 4 REMARK 465 PRO A 5 REMARK 465 HIS A 6 REMARK 465 SER A 7 REMARK 465 LEU A 8 REMARK 465 HIS A 9 REMARK 465 PRO A 10 REMARK 465 LEU A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 ASP A 14 REMARK 465 SER A 15 REMARK 465 THR A 16 REMARK 465 SER A 17 REMARK 465 GLN A 18 REMARK 465 ALA A 19 REMARK 465 LEU A 20 REMARK 465 HIS A 21 REMARK 465 SER A 22 REMARK 465 SER A 23 REMARK 465 THR A 24 REMARK 465 LYS A 25 REMARK 465 PRO A 26 REMARK 465 PRO A 27 REMARK 465 ALA A 28 REMARK 465 THR A 29 REMARK 465 PRO A 30 REMARK 465 HIS A 31 REMARK 465 GLU A 32 REMARK 465 GLY A 33 REMARK 465 GLU A 34 REMARK 465 PHE A 35 REMARK 465 HIS A 36 REMARK 465 SER A 37 REMARK 465 VAL A 38 REMARK 465 ARG A 39 REMARK 465 GLN A 704 REMARK 465 ASN A 705 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 40 CG OD1 OD2 REMARK 470 ARG A 659 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 676 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 692 CG CD OE1 OE2 REMARK 470 GLN A 699 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 127 -75.53 -146.95 REMARK 500 MET A 270 -123.51 -110.53 REMARK 500 ARG A 272 -20.18 76.06 REMARK 500 THR A 330 -62.70 -97.58 REMARK 500 VAL A 369 -66.46 -95.35 REMARK 500 VAL A 453 -63.58 -100.65 REMARK 500 TRP A 466 -174.64 -175.56 REMARK 500 THR A 490 -116.71 69.83 REMARK 500 ASP A 533 68.78 -154.80 REMARK 500 ASP A 569 -165.73 -104.19 REMARK 500 GLN A 675 85.38 -68.90 REMARK 500 REMARK 500 REMARK: NULL DBREF 8U2R A 1 705 UNP A4I093 A4I093_LEIIN 1 705 SEQADV 8U2R MET A -7 UNP A4I093 INITIATING METHIONINE SEQADV 8U2R ALA A -6 UNP A4I093 EXPRESSION TAG SEQADV 8U2R HIS A -5 UNP A4I093 EXPRESSION TAG SEQADV 8U2R HIS A -4 UNP A4I093 EXPRESSION TAG SEQADV 8U2R HIS A -3 UNP A4I093 EXPRESSION TAG SEQADV 8U2R HIS A -2 UNP A4I093 EXPRESSION TAG SEQADV 8U2R HIS A -1 UNP A4I093 EXPRESSION TAG SEQADV 8U2R HIS A 0 UNP A4I093 EXPRESSION TAG SEQRES 1 A 713 MET ALA HIS HIS HIS HIS HIS HIS MET SER ASP ASN PRO SEQRES 2 A 713 HIS SER LEU HIS PRO LEU SER SER ASP SER THR SER GLN SEQRES 3 A 713 ALA LEU HIS SER SER THR LYS PRO PRO ALA THR PRO HIS SEQRES 4 A 713 GLU GLY GLU PHE HIS SER VAL ARG ASP SER ASN VAL VAL SEQRES 5 A 713 GLU PRO THR GLU ALA ASN GLY LYS LYS SER HIS VAL GLY SEQRES 6 A 713 PRO HIS LEU GLY SER ARG MET ARG ILE TYR GLU TYR SER SEQRES 7 A 713 ILE GLU HIS ASN ASP ALA PHE TRP ALA GLU ILE ALA ARG SEQRES 8 A 713 ARG ASP PHE TYR TRP LYS THR THR TRP PRO ASP ASP GLN SEQRES 9 A 713 HIS VAL LYS SER TYR ASN PHE ASP LYS SER LYS GLY PRO SEQRES 10 A 713 ILE PHE VAL LYS TRP PHE GLU GLY ALA VAL THR ASN VAL SEQRES 11 A 713 CYS TYR ASN ALA LEU ASP ARG HIS LEU PRO ALA HIS LYS SEQRES 12 A 713 ASP ARG VAL CYS PHE TYR PHE GLU GLY ASN ASP PRO SER SEQRES 13 A 713 VAL THR GLU ALA VAL THR TYR GLY SER MET TYR THR ARG SEQRES 14 A 713 VAL VAL GLU LEU ALA ASN VAL LEU LYS TYR GLN TYR GLY SEQRES 15 A 713 ILE ALA LYS GLY ASP ARG VAL GLY LEU TYR LEU PRO MET SEQRES 16 A 713 ILE PRO PHE ALA ALA VAL ALA MET LEU ALA CYS ALA ARG SEQRES 17 A 713 ILE GLY ALA VAL ILE THR VAL ILE PHE GLY GLY PHE SER SEQRES 18 A 713 ALA GLN ALA LEU SER SER ARG LEU LYS ASP ALA GLN THR SEQRES 19 A 713 LYS LEU LEU ILE THR ALA ASP ALA SER ALA ARG GLY THR SEQRES 20 A 713 LYS PRO ILE PRO LEU LYS ASP VAL ALA ASP GLU ALA LEU SEQRES 21 A 713 LYS GLU CYS GLU GLU GLU GLY MET SER ILE ALA CYS LEU SEQRES 22 A 713 VAL ALA GLU ASN MET ASN ARG GLN SER CYS LYS MET LYS SEQRES 23 A 713 GLU GLY ARG ASP THR TRP TYR GLY ASP ALA LEU ALA ARG SEQRES 24 A 713 LEU THR PRO GLU GLN HIS GLU GLU CYS PRO VAL GLU TRP SEQRES 25 A 713 MET ASP ALA GLU ASP VAL LEU PHE LEU LEU TYR THR SER SEQRES 26 A 713 GLY SER THR GLY LYS PRO LYS ALA ILE VAL HIS THR THR SEQRES 27 A 713 ALA GLY TYR MET VAL TYR ALA SER THR THR PHE MET TYR SEQRES 28 A 713 SER PHE ASP TYR HIS MET ASP ASP VAL TYR PHE CYS THR SEQRES 29 A 713 ALA ASP ILE GLY TRP ILE THR GLY HIS SER TYR VAL VAL SEQRES 30 A 713 TYR GLY PRO MET ILE HIS CYS ALA THR SER VAL LEU PHE SEQRES 31 A 713 GLU GLY VAL PRO ASN TYR PRO ASP TYR SER ARG TRP TRP SEQRES 32 A 713 GLN LEU VAL GLU LYS TYR LYS VAL SER ILE LEU TYR THR SEQRES 33 A 713 ALA PRO THR ALA ILE ARG SER LEU MET GLN ALA GLY ASP SEQRES 34 A 713 ASP TYR VAL LYS VAL GLY ASN ARG SER THR LEU ARG VAL SEQRES 35 A 713 LEU GLY SER VAL GLY GLU PRO ILE ASN VAL GLU ALA TRP SEQRES 36 A 713 LYS TRP LEU ARG ASP VAL GLY GLY GLU GLY HIS CYS ASP SEQRES 37 A 713 VAL SER ASP THR TRP TRP GLN THR GLU THR GLY GLY HIS SEQRES 38 A 713 MET ILE THR PRO MET PRO GLY CYS THR PRO MET LYS PRO SEQRES 39 A 713 GLY SER ALA THR LEU PRO PHE PHE GLY VAL GLN PRO VAL SEQRES 40 A 713 ILE LEU ASP PRO MET LYS LEU HIS GLU LYS GLN GLY PRO SEQRES 41 A 713 ALA GLU GLY LEU LEU ALA ILE ARG ALA PRO TRP PRO GLY SEQRES 42 A 713 MET ALA ARG THR ILE TYR GLY ASP HIS ALA ARG PHE GLU SEQRES 43 A 713 LYS THR TYR PHE GLY VAL ASP GLY TYR TYR MET THR GLY SEQRES 44 A 713 ASP GLY ALA ARG ARG ASP SER ASP GLY TYR TYR TRP ILE SEQRES 45 A 713 THR GLY ARG VAL ASP ASP VAL LEU ASN VAL SER GLY HIS SEQRES 46 A 713 ARG ILE GLY THR SER GLU ILE GLU ASP ALA VAL ASN THR SEQRES 47 A 713 HIS PRO ALA VAL VAL GLU SER ALA VAL VAL GLY PHE PRO SEQRES 48 A 713 HIS ASN ILE LYS GLY GLU GLY ILE TYR VAL PHE LEU THR SEQRES 49 A 713 PHE ARG GLN GLY THR GLU VAL THR PRO GLU LEU LEU ALA SEQRES 50 A 713 ALA VAL LYS ALA THR VAL ARG LYS VAL ILE GLY PRO LEU SEQRES 51 A 713 ALA THR PRO ASP VAL MET GLN VAL ALA ARG VAL GLY LEU SEQRES 52 A 713 PRO LYS THR ARG SER GLY LYS ILE VAL ARG ARG ILE LEU SEQRES 53 A 713 ARG LYS VAL SER ALA GLY GLN TYR THR GLU LEU GLY ASP SEQRES 54 A 713 THR SER THR LEU ALA ASN PRO ASP VAL VAL GLU ASP LEU SEQRES 55 A 713 ILE ALA GLU HIS GLN ARG LEU CYS SER GLN ASN HET PEG A 801 7 HET WTA A 802 25 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM WTA 5'-O-[(S)-ETHOXY(HYDROXY)PHOSPHORYL]ADENOSINE FORMUL 2 PEG C4 H10 O3 FORMUL 3 WTA C12 H18 N5 O7 P FORMUL 4 HOH *503(H2 O) HELIX 1 AA1 THR A 47 SER A 54 1 8 HELIX 2 AA2 HIS A 59 HIS A 73 1 15 HELIX 3 AA3 HIS A 73 PHE A 86 1 14 HELIX 4 AA4 ASP A 104 GLY A 108 5 5 HELIX 5 AA5 ASN A 121 LEU A 127 1 7 HELIX 6 AA6 ASP A 128 LEU A 131 5 4 HELIX 7 AA7 TYR A 155 GLN A 172 1 18 HELIX 8 AA8 ILE A 188 GLY A 202 1 15 HELIX 9 AA9 SER A 213 GLN A 225 1 13 HELIX 10 AB1 PRO A 243 GLU A 258 1 16 HELIX 11 AB2 TYR A 285 ARG A 291 1 7 HELIX 12 AB3 LEU A 292 GLU A 298 5 7 HELIX 13 AB4 THR A 330 ASP A 346 1 17 HELIX 14 AB5 TRP A 361 VAL A 368 1 8 HELIX 15 AB6 VAL A 369 HIS A 375 1 7 HELIX 16 AB7 SER A 392 LYS A 402 1 11 HELIX 17 AB8 ALA A 409 GLY A 420 1 12 HELIX 18 AB9 GLY A 420 VAL A 426 1 7 HELIX 19 AC1 ASN A 443 VAL A 453 1 11 HELIX 20 AC2 GLN A 467 GLY A 471 5 5 HELIX 21 AC3 ASP A 533 PHE A 542 1 10 HELIX 22 AC4 THR A 581 THR A 590 1 10 HELIX 23 AC5 THR A 624 ILE A 639 1 16 HELIX 24 AC6 GLY A 640 THR A 644 5 5 HELIX 25 AC7 VAL A 664 ALA A 673 1 10 HELIX 26 AC8 ASP A 689 CYS A 702 1 14 SHEET 1 AA1 2 LYS A 99 ASN A 102 0 SHEET 2 AA1 2 PHE A 111 TRP A 114 -1 O PHE A 111 N ASN A 102 SHEET 1 AA2 2 VAL A 119 THR A 120 0 SHEET 2 AA2 2 MET A 305 ASP A 306 -1 O MET A 305 N THR A 120 SHEET 1 AA3 7 THR A 150 THR A 154 0 SHEET 2 AA3 7 VAL A 138 GLU A 143 -1 N PHE A 140 O VAL A 153 SHEET 3 AA3 7 THR A 378 PHE A 382 1 O SER A 379 N TYR A 141 SHEET 4 AA3 7 VAL A 352 CYS A 355 1 N TYR A 353 O THR A 378 SHEET 5 AA3 7 ILE A 405 THR A 408 1 O TYR A 407 N PHE A 354 SHEET 6 AA3 7 VAL A 434 VAL A 438 1 O GLY A 436 N LEU A 406 SHEET 7 AA3 7 ASP A 460 THR A 464 1 O SER A 462 N LEU A 435 SHEET 1 AA4 8 ASP A 282 TRP A 284 0 SHEET 2 AA4 8 ALA A 263 ALA A 267 1 N VAL A 266 O THR A 283 SHEET 3 AA4 8 LEU A 228 ALA A 232 1 N THR A 231 O ALA A 267 SHEET 4 AA4 8 ARG A 180 TYR A 184 1 N GLY A 182 O ILE A 230 SHEET 5 AA4 8 VAL A 204 VAL A 207 1 O VAL A 204 N VAL A 181 SHEET 6 AA4 8 VAL A 310 THR A 316 1 O LEU A 313 N ILE A 205 SHEET 7 AA4 8 LYS A 324 THR A 329 -1 O HIS A 328 N LEU A 311 SHEET 8 AA4 8 THR A 529 ILE A 530 -1 O THR A 529 N VAL A 327 SHEET 1 AA5 2 SER A 235 ARG A 237 0 SHEET 2 AA5 2 LYS A 240 ILE A 242 -1 O LYS A 240 N ARG A 237 SHEET 1 AA6 4 PRO A 498 LEU A 501 0 SHEET 2 AA6 4 ALA A 513 ILE A 519 -1 O LEU A 516 N LEU A 501 SHEET 3 AA6 4 TYR A 548 ARG A 556 -1 O ARG A 556 N ALA A 513 SHEET 4 AA6 4 TYR A 562 ARG A 567 -1 O TRP A 563 N ARG A 555 SHEET 1 AA7 2 VAL A 571 VAL A 574 0 SHEET 2 AA7 2 HIS A 577 GLY A 580 -1 O ILE A 579 N LEU A 572 SHEET 1 AA8 3 VAL A 594 HIS A 604 0 SHEET 2 AA8 3 GLY A 608 PHE A 617 -1 O GLY A 610 N PHE A 602 SHEET 3 AA8 3 VAL A 647 VAL A 650 1 O GLN A 649 N VAL A 613 CISPEP 1 LEU A 131 PRO A 132 0 2.11 CISPEP 2 TYR A 388 PRO A 389 0 4.04 CRYST1 58.926 74.154 151.056 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016970 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013485 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006620 0.00000