HEADER LIGASE 06-SEP-23 8U2T TITLE CRYSTAL STRUCTURE OF ACETYL-COENZYME A SYNTHETASE FROM LEISHMANIA TITLE 2 INFANTUM (COA AND AMP BOUND) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYL-COENZYME A SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA INFANTUM; SOURCE 3 ORGANISM_TAXID: 5671; SOURCE 4 GENE: LINJ_23_0580; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: LEINA.00629.B.B1 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, LIGASE, ACETYL-COENZYME A SYNTHETASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE,SEATTLE AUTHOR 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 15-NOV-23 8U2T 1 REMARK REVDAT 1 13-SEP-23 8U2T 0 JRNL AUTH S.LOVELL,L.LIU,K.P.BATTAILE JRNL TITL CRYSTAL STRUCTURE OF ACETYL-COENZYME A SYNTHETASE FROM JRNL TITL 2 LEISHMANIA INFANTUM (COA AND AMP BOUND) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21RC1_4933: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 75869 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3795 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1200 - 4.9500 0.99 2870 155 0.1793 0.1744 REMARK 3 2 4.9500 - 3.9300 1.00 2768 139 0.1157 0.1175 REMARK 3 3 3.9300 - 3.4300 1.00 2737 137 0.1317 0.1544 REMARK 3 4 3.4300 - 3.1200 1.00 2691 146 0.1517 0.1730 REMARK 3 5 3.1200 - 2.8900 1.00 2734 114 0.1645 0.1823 REMARK 3 6 2.8900 - 2.7200 1.00 2682 142 0.1557 0.1930 REMARK 3 7 2.7200 - 2.5900 1.00 2679 125 0.1534 0.1908 REMARK 3 8 2.5900 - 2.4700 1.00 2694 123 0.1438 0.1778 REMARK 3 9 2.4700 - 2.3800 1.00 2678 149 0.1465 0.1827 REMARK 3 10 2.3800 - 2.3000 1.00 2668 145 0.1382 0.1935 REMARK 3 11 2.3000 - 2.2300 1.00 2670 126 0.1379 0.1868 REMARK 3 12 2.2300 - 2.1600 1.00 2665 143 0.1377 0.1964 REMARK 3 13 2.1600 - 2.1100 1.00 2631 141 0.1413 0.1627 REMARK 3 14 2.1100 - 2.0500 1.00 2644 154 0.1511 0.2114 REMARK 3 15 2.0500 - 2.0100 1.00 2626 157 0.1579 0.2231 REMARK 3 16 2.0100 - 1.9600 1.00 2646 141 0.1691 0.2099 REMARK 3 17 1.9600 - 1.9300 1.00 2634 159 0.1726 0.2074 REMARK 3 18 1.9300 - 1.8900 1.00 2648 129 0.1682 0.2109 REMARK 3 19 1.8900 - 1.8600 1.00 2633 138 0.1744 0.2563 REMARK 3 20 1.8600 - 1.8200 1.00 2667 140 0.1805 0.2393 REMARK 3 21 1.8200 - 1.7900 1.00 2610 128 0.1860 0.2293 REMARK 3 22 1.7900 - 1.7700 1.00 2659 147 0.1903 0.2124 REMARK 3 23 1.7700 - 1.7400 1.00 2621 137 0.1917 0.2274 REMARK 3 24 1.7400 - 1.7200 1.00 2635 161 0.2095 0.2707 REMARK 3 25 1.7200 - 1.6900 1.00 2611 137 0.2265 0.2391 REMARK 3 26 1.6900 - 1.6700 1.00 2633 126 0.2441 0.2634 REMARK 3 27 1.6700 - 1.6500 1.00 2640 156 0.2577 0.2872 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5422 REMARK 3 ANGLE : 0.997 7413 REMARK 3 CHIRALITY : 0.060 809 REMARK 3 PLANARITY : 0.010 943 REMARK 3 DIHEDRAL : 13.477 1947 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.5012 1.8771 34.4453 REMARK 3 T TENSOR REMARK 3 T11: 0.1610 T22: 0.2337 REMARK 3 T33: 0.1560 T12: 0.0240 REMARK 3 T13: 0.0360 T23: -0.0338 REMARK 3 L TENSOR REMARK 3 L11: 2.1873 L22: 2.0207 REMARK 3 L33: 1.7016 L12: 1.3041 REMARK 3 L13: 0.6994 L23: 0.6502 REMARK 3 S TENSOR REMARK 3 S11: 0.0301 S12: -0.2649 S13: 0.1972 REMARK 3 S21: 0.1477 S22: -0.0706 S23: 0.2426 REMARK 3 S31: -0.0999 S32: -0.1937 S33: 0.0449 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 257 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2487 -6.7410 22.3779 REMARK 3 T TENSOR REMARK 3 T11: 0.1101 T22: 0.1371 REMARK 3 T33: 0.1235 T12: -0.0136 REMARK 3 T13: -0.0117 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.2184 L22: 0.7171 REMARK 3 L33: 0.8293 L12: -0.1199 REMARK 3 L13: 0.0961 L23: -0.1119 REMARK 3 S TENSOR REMARK 3 S11: 0.0166 S12: -0.0115 S13: -0.0331 REMARK 3 S21: -0.0108 S22: -0.0170 S23: -0.0864 REMARK 3 S31: -0.0049 S32: 0.1014 S33: -0.0020 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 258 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4368 -11.3616 18.9205 REMARK 3 T TENSOR REMARK 3 T11: 0.1760 T22: 0.1377 REMARK 3 T33: 0.1396 T12: -0.0019 REMARK 3 T13: -0.0006 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.4338 L22: 0.4921 REMARK 3 L33: 0.5588 L12: 0.1773 REMARK 3 L13: 0.1649 L23: 0.0324 REMARK 3 S TENSOR REMARK 3 S11: 0.0057 S12: -0.0170 S13: -0.0918 REMARK 3 S21: -0.0181 S22: 0.0003 S23: -0.0396 REMARK 3 S31: 0.0575 S32: 0.0187 S33: -0.0031 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 460 THROUGH 551 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.6484 10.6840 20.0223 REMARK 3 T TENSOR REMARK 3 T11: 0.1940 T22: 0.1369 REMARK 3 T33: 0.1978 T12: 0.0157 REMARK 3 T13: -0.0136 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 1.7618 L22: 1.3573 REMARK 3 L33: 0.7272 L12: 0.6464 REMARK 3 L13: 0.0807 L23: 0.0750 REMARK 3 S TENSOR REMARK 3 S11: -0.0578 S12: -0.0185 S13: 0.3487 REMARK 3 S21: -0.0729 S22: 0.0161 S23: 0.1815 REMARK 3 S31: -0.1909 S32: -0.0697 S33: 0.0221 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 552 THROUGH 604 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.2804 5.8254 3.2482 REMARK 3 T TENSOR REMARK 3 T11: 0.2677 T22: 0.2167 REMARK 3 T33: 0.2670 T12: 0.0248 REMARK 3 T13: -0.0082 T23: 0.0487 REMARK 3 L TENSOR REMARK 3 L11: 2.9537 L22: 0.6566 REMARK 3 L33: 2.2232 L12: -0.7042 REMARK 3 L13: -2.3061 L23: 0.7017 REMARK 3 S TENSOR REMARK 3 S11: 0.0608 S12: 0.0642 S13: 0.2947 REMARK 3 S21: -0.1663 S22: 0.0276 S23: -0.0972 REMARK 3 S31: -0.0448 S32: 0.0267 S33: -0.0965 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 605 THROUGH 664 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.4265 1.9308 -11.1492 REMARK 3 T TENSOR REMARK 3 T11: 0.2976 T22: 0.2306 REMARK 3 T33: 0.1793 T12: 0.0475 REMARK 3 T13: 0.0057 T23: 0.0305 REMARK 3 L TENSOR REMARK 3 L11: 1.8269 L22: 1.7215 REMARK 3 L33: 1.0256 L12: -0.8003 REMARK 3 L13: 0.6067 L23: 0.3113 REMARK 3 S TENSOR REMARK 3 S11: 0.3299 S12: 0.4399 S13: 0.1569 REMARK 3 S21: -0.5925 S22: -0.2064 S23: 0.0478 REMARK 3 S31: 0.1366 S32: 0.1198 S33: -0.1007 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 665 THROUGH 703 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.8477 10.6314 -13.7176 REMARK 3 T TENSOR REMARK 3 T11: 0.4043 T22: 0.2826 REMARK 3 T33: 0.3836 T12: 0.0793 REMARK 3 T13: -0.0618 T23: 0.0774 REMARK 3 L TENSOR REMARK 3 L11: 4.1979 L22: 2.1257 REMARK 3 L33: 2.8824 L12: 1.3612 REMARK 3 L13: -0.2186 L23: -0.6614 REMARK 3 S TENSOR REMARK 3 S11: 0.3026 S12: 0.1315 S13: 0.0263 REMARK 3 S21: -0.2962 S22: 0.0298 S23: 0.3732 REMARK 3 S31: 0.3216 S32: -0.0736 S33: -0.3091 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8U2T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1000277129. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75992 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 46.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.50 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 13.90 REMARK 200 R MERGE FOR SHELL (I) : 1.73100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: JCSG+ E4: 1.26M AMMONIUM SULFATE, 0.2M REMARK 280 LITHIUM SULFATE, 100MM TRIS PH 8.5. LEINA.00629.B.B1.PW39174 AT REMARK 280 20 MG/ML. PLATE 13157 WELL E4 DROP 2. PUCK: PSL-1315, CRYO: 2.5M REMARK 280 LITHIUM SULFATE. 2MM COA AND AMP ADDED PRIOR TO CRYSTALLIZATION., REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.53400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.35900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.96150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.35900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.53400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.96150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 ASN A 4 REMARK 465 PRO A 5 REMARK 465 HIS A 6 REMARK 465 SER A 7 REMARK 465 LEU A 8 REMARK 465 HIS A 9 REMARK 465 PRO A 10 REMARK 465 LEU A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 ASP A 14 REMARK 465 SER A 15 REMARK 465 THR A 16 REMARK 465 SER A 17 REMARK 465 GLN A 18 REMARK 465 ALA A 19 REMARK 465 LEU A 20 REMARK 465 HIS A 21 REMARK 465 SER A 22 REMARK 465 SER A 23 REMARK 465 THR A 24 REMARK 465 LYS A 25 REMARK 465 PRO A 26 REMARK 465 PRO A 27 REMARK 465 ALA A 28 REMARK 465 THR A 29 REMARK 465 PRO A 30 REMARK 465 HIS A 31 REMARK 465 GLU A 32 REMARK 465 GLY A 33 REMARK 465 GLU A 34 REMARK 465 PHE A 35 REMARK 465 HIS A 36 REMARK 465 SER A 37 REMARK 465 VAL A 38 REMARK 465 ARG A 39 REMARK 465 ASN A 271 REMARK 465 ARG A 272 REMARK 465 GLN A 273 REMARK 465 GLN A 704 REMARK 465 ASN A 705 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 LYS A 322 CG CD CE NZ REMARK 470 LYS A 324 CG CD CE NZ REMARK 470 ASP A 570 CG OD1 OD2 REMARK 470 ARG A 618 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 619 CG CD OE1 NE2 REMARK 470 GLU A 622 CG CD OE1 OE2 REMARK 470 ARG A 652 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 662 CG CD CE NZ REMARK 470 ASP A 689 CG OD1 OD2 REMARK 470 GLU A 692 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 97 75.07 -151.60 REMARK 500 LEU A 127 -75.92 -142.15 REMARK 500 THR A 330 -63.73 -97.21 REMARK 500 VAL A 369 -67.60 -95.83 REMARK 500 TYR A 391 0.78 -69.87 REMARK 500 VAL A 453 -63.90 -103.87 REMARK 500 TRP A 466 -176.99 -172.86 REMARK 500 THR A 490 -119.19 71.84 REMARK 500 ASP A 533 66.94 -155.15 REMARK 500 ASP A 569 -166.97 -107.17 REMARK 500 ASP A 570 38.84 -99.03 REMARK 500 CYS A 702 -72.75 70.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 COA A 808 DBREF 8U2T A 1 705 UNP A4I093 A4I093_LEIIN 1 705 SEQADV 8U2T MET A -7 UNP A4I093 INITIATING METHIONINE SEQADV 8U2T ALA A -6 UNP A4I093 EXPRESSION TAG SEQADV 8U2T HIS A -5 UNP A4I093 EXPRESSION TAG SEQADV 8U2T HIS A -4 UNP A4I093 EXPRESSION TAG SEQADV 8U2T HIS A -3 UNP A4I093 EXPRESSION TAG SEQADV 8U2T HIS A -2 UNP A4I093 EXPRESSION TAG SEQADV 8U2T HIS A -1 UNP A4I093 EXPRESSION TAG SEQADV 8U2T HIS A 0 UNP A4I093 EXPRESSION TAG SEQRES 1 A 713 MET ALA HIS HIS HIS HIS HIS HIS MET SER ASP ASN PRO SEQRES 2 A 713 HIS SER LEU HIS PRO LEU SER SER ASP SER THR SER GLN SEQRES 3 A 713 ALA LEU HIS SER SER THR LYS PRO PRO ALA THR PRO HIS SEQRES 4 A 713 GLU GLY GLU PHE HIS SER VAL ARG ASP SER ASN VAL VAL SEQRES 5 A 713 GLU PRO THR GLU ALA ASN GLY LYS LYS SER HIS VAL GLY SEQRES 6 A 713 PRO HIS LEU GLY SER ARG MET ARG ILE TYR GLU TYR SER SEQRES 7 A 713 ILE GLU HIS ASN ASP ALA PHE TRP ALA GLU ILE ALA ARG SEQRES 8 A 713 ARG ASP PHE TYR TRP LYS THR THR TRP PRO ASP ASP GLN SEQRES 9 A 713 HIS VAL LYS SER TYR ASN PHE ASP LYS SER LYS GLY PRO SEQRES 10 A 713 ILE PHE VAL LYS TRP PHE GLU GLY ALA VAL THR ASN VAL SEQRES 11 A 713 CYS TYR ASN ALA LEU ASP ARG HIS LEU PRO ALA HIS LYS SEQRES 12 A 713 ASP ARG VAL CYS PHE TYR PHE GLU GLY ASN ASP PRO SER SEQRES 13 A 713 VAL THR GLU ALA VAL THR TYR GLY SER MET TYR THR ARG SEQRES 14 A 713 VAL VAL GLU LEU ALA ASN VAL LEU LYS TYR GLN TYR GLY SEQRES 15 A 713 ILE ALA LYS GLY ASP ARG VAL GLY LEU TYR LEU PRO MET SEQRES 16 A 713 ILE PRO PHE ALA ALA VAL ALA MET LEU ALA CYS ALA ARG SEQRES 17 A 713 ILE GLY ALA VAL ILE THR VAL ILE PHE GLY GLY PHE SER SEQRES 18 A 713 ALA GLN ALA LEU SER SER ARG LEU LYS ASP ALA GLN THR SEQRES 19 A 713 LYS LEU LEU ILE THR ALA ASP ALA SER ALA ARG GLY THR SEQRES 20 A 713 LYS PRO ILE PRO LEU LYS ASP VAL ALA ASP GLU ALA LEU SEQRES 21 A 713 LYS GLU CYS GLU GLU GLU GLY MET SER ILE ALA CYS LEU SEQRES 22 A 713 VAL ALA GLU ASN MET ASN ARG GLN SER CSO LYS MET LYS SEQRES 23 A 713 GLU GLY ARG ASP THR TRP TYR GLY ASP ALA LEU ALA ARG SEQRES 24 A 713 LEU THR PRO GLU GLN HIS GLU GLU CYS PRO VAL GLU TRP SEQRES 25 A 713 MET ASP ALA GLU ASP VAL LEU PHE LEU LEU TYR THR SER SEQRES 26 A 713 GLY SER THR GLY LYS PRO LYS ALA ILE VAL HIS THR THR SEQRES 27 A 713 ALA GLY TYR MET VAL TYR ALA SER THR THR PHE MET TYR SEQRES 28 A 713 SER PHE ASP TYR HIS MET ASP ASP VAL TYR PHE CYS THR SEQRES 29 A 713 ALA ASP ILE GLY TRP ILE THR GLY HIS SER TYR VAL VAL SEQRES 30 A 713 TYR GLY PRO MET ILE HIS CYS ALA THR SER VAL LEU PHE SEQRES 31 A 713 GLU GLY VAL PRO ASN TYR PRO ASP TYR SER ARG TRP TRP SEQRES 32 A 713 GLN LEU VAL GLU LYS TYR LYS VAL SER ILE LEU TYR THR SEQRES 33 A 713 ALA PRO THR ALA ILE ARG SER LEU MET GLN ALA GLY ASP SEQRES 34 A 713 ASP TYR VAL LYS VAL GLY ASN ARG SER THR LEU ARG VAL SEQRES 35 A 713 LEU GLY SER VAL GLY GLU PRO ILE ASN VAL GLU ALA TRP SEQRES 36 A 713 LYS TRP LEU ARG ASP VAL GLY GLY GLU GLY HIS CYS ASP SEQRES 37 A 713 VAL SER ASP THR TRP TRP GLN THR GLU THR GLY GLY HIS SEQRES 38 A 713 MET ILE THR PRO MET PRO GLY CYS THR PRO MET LYS PRO SEQRES 39 A 713 GLY SER ALA THR LEU PRO PHE PHE GLY VAL GLN PRO VAL SEQRES 40 A 713 ILE LEU ASP PRO MET LYS LEU HIS GLU LYS GLN GLY PRO SEQRES 41 A 713 ALA GLU GLY LEU LEU ALA ILE ARG ALA PRO TRP PRO GLY SEQRES 42 A 713 MET ALA ARG THR ILE TYR GLY ASP HIS ALA ARG PHE GLU SEQRES 43 A 713 LYS THR TYR PHE GLY VAL ASP GLY TYR TYR MET THR GLY SEQRES 44 A 713 ASP GLY ALA ARG ARG ASP SER ASP GLY TYR TYR TRP ILE SEQRES 45 A 713 THR GLY ARG VAL ASP ASP VAL LEU ASN VAL SER GLY HIS SEQRES 46 A 713 ARG ILE GLY THR SER GLU ILE GLU ASP ALA VAL ASN THR SEQRES 47 A 713 HIS PRO ALA VAL VAL GLU SER ALA VAL VAL GLY PHE PRO SEQRES 48 A 713 HIS ASN ILE LYS GLY GLU GLY ILE TYR VAL PHE LEU THR SEQRES 49 A 713 PHE ARG GLN GLY THR GLU VAL THR PRO GLU LEU LEU ALA SEQRES 50 A 713 ALA VAL LYS ALA THR VAL ARG LYS VAL ILE GLY PRO LEU SEQRES 51 A 713 ALA THR PRO ASP VAL MET GLN VAL ALA ARG VAL GLY LEU SEQRES 52 A 713 PRO LYS THR ARG SER GLY LYS ILE VAL ARG ARG ILE LEU SEQRES 53 A 713 ARG LYS VAL SER ALA GLY GLN TYR THR GLU LEU GLY ASP SEQRES 54 A 713 THR SER THR LEU ALA ASN PRO ASP VAL VAL GLU ASP LEU SEQRES 55 A 713 ILE ALA GLU HIS GLN ARG LEU CYS SER GLN ASN MODRES 8U2T CSO A 275 CYS MODIFIED RESIDUE HET CSO A 275 7 HET SO4 A 801 5 HET SO4 A 802 5 HET SO4 A 803 5 HET SO4 A 804 5 HET SO4 A 805 5 HET CL A 806 1 HET AMP A 807 23 HET COA A 808 31 HETNAM CSO S-HYDROXYCYSTEINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM COA COENZYME A FORMUL 1 CSO C3 H7 N O3 S FORMUL 2 SO4 5(O4 S 2-) FORMUL 7 CL CL 1- FORMUL 8 AMP C10 H14 N5 O7 P FORMUL 9 COA C21 H36 N7 O16 P3 S FORMUL 10 HOH *476(H2 O) HELIX 1 AA1 THR A 47 SER A 54 1 8 HELIX 2 AA2 HIS A 59 HIS A 73 1 15 HELIX 3 AA3 HIS A 73 PHE A 86 1 14 HELIX 4 AA4 ASP A 104 GLY A 108 5 5 HELIX 5 AA5 ASN A 121 LEU A 127 1 7 HELIX 6 AA6 ASP A 128 LEU A 131 5 4 HELIX 7 AA7 TYR A 155 GLN A 172 1 18 HELIX 8 AA8 ILE A 188 GLY A 202 1 15 HELIX 9 AA9 SER A 213 GLN A 225 1 13 HELIX 10 AB1 LEU A 244 GLU A 258 1 15 HELIX 11 AB2 TYR A 285 ARG A 291 1 7 HELIX 12 AB3 LEU A 292 GLU A 298 5 7 HELIX 13 AB4 THR A 330 PHE A 345 1 16 HELIX 14 AB5 TRP A 361 VAL A 368 1 8 HELIX 15 AB6 VAL A 369 HIS A 375 1 7 HELIX 16 AB7 SER A 392 LYS A 402 1 11 HELIX 17 AB8 ALA A 409 GLY A 420 1 12 HELIX 18 AB9 ASP A 421 VAL A 426 1 6 HELIX 19 AC1 ASN A 443 VAL A 453 1 11 HELIX 20 AC2 GLN A 467 GLY A 471 5 5 HELIX 21 AC3 ASP A 533 PHE A 542 1 10 HELIX 22 AC4 THR A 581 THR A 590 1 10 HELIX 23 AC5 THR A 624 ILE A 639 1 16 HELIX 24 AC6 GLY A 640 THR A 644 5 5 HELIX 25 AC7 VAL A 664 ALA A 673 1 10 HELIX 26 AC8 GLN A 675 LEU A 679 5 5 HELIX 27 AC9 ASP A 689 CYS A 702 1 14 SHEET 1 AA1 2 LYS A 99 ASN A 102 0 SHEET 2 AA1 2 PHE A 111 TRP A 114 -1 O PHE A 111 N ASN A 102 SHEET 1 AA2 2 VAL A 119 THR A 120 0 SHEET 2 AA2 2 MET A 305 ASP A 306 -1 O MET A 305 N THR A 120 SHEET 1 AA3 7 THR A 150 THR A 154 0 SHEET 2 AA3 7 VAL A 138 GLU A 143 -1 N CYS A 139 O VAL A 153 SHEET 3 AA3 7 THR A 378 PHE A 382 1 O SER A 379 N TYR A 141 SHEET 4 AA3 7 VAL A 352 CYS A 355 1 N TYR A 353 O THR A 378 SHEET 5 AA3 7 ILE A 405 THR A 408 1 O TYR A 407 N PHE A 354 SHEET 6 AA3 7 VAL A 434 VAL A 438 1 O GLY A 436 N LEU A 406 SHEET 7 AA3 7 ASP A 460 THR A 464 1 O SER A 462 N LEU A 435 SHEET 1 AA4 8 ASP A 282 TRP A 284 0 SHEET 2 AA4 8 ALA A 263 ALA A 267 1 N VAL A 266 O THR A 283 SHEET 3 AA4 8 LEU A 228 ALA A 232 1 N THR A 231 O ALA A 267 SHEET 4 AA4 8 ARG A 180 TYR A 184 1 N GLY A 182 O ILE A 230 SHEET 5 AA4 8 VAL A 204 VAL A 207 1 O VAL A 204 N VAL A 181 SHEET 6 AA4 8 VAL A 310 THR A 316 1 O LEU A 313 N ILE A 205 SHEET 7 AA4 8 LYS A 324 THR A 329 -1 O HIS A 328 N LEU A 311 SHEET 8 AA4 8 THR A 529 ILE A 530 -1 O THR A 529 N VAL A 327 SHEET 1 AA5 2 ALA A 234 ARG A 237 0 SHEET 2 AA5 2 LYS A 240 PRO A 243 -1 O ILE A 242 N SER A 235 SHEET 1 AA6 4 PRO A 498 LEU A 501 0 SHEET 2 AA6 4 ALA A 513 ILE A 519 -1 O LEU A 516 N LEU A 501 SHEET 3 AA6 4 TYR A 548 ARG A 556 -1 O ARG A 556 N ALA A 513 SHEET 4 AA6 4 TYR A 562 ARG A 567 -1 O GLY A 566 N GLY A 553 SHEET 1 AA7 2 VAL A 571 VAL A 574 0 SHEET 2 AA7 2 HIS A 577 GLY A 580 -1 O HIS A 577 N VAL A 574 SHEET 1 AA8 3 VAL A 594 HIS A 604 0 SHEET 2 AA8 3 GLY A 608 PHE A 617 -1 O GLY A 610 N PHE A 602 SHEET 3 AA8 3 VAL A 647 VAL A 650 1 O GLN A 649 N VAL A 613 LINK C SER A 274 N CSO A 275 1555 1555 1.33 LINK C CSO A 275 N LYS A 276 1555 1555 1.33 CISPEP 1 LEU A 131 PRO A 132 0 5.19 CISPEP 2 TYR A 388 PRO A 389 0 3.90 CRYST1 59.068 69.923 150.718 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016930 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014301 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006635 0.00000