HEADER HYDROLASE 10-SEP-23 8U4A TITLE CRYSTAL STRUCTURE OF BLCEL9A FROM GLYCOSIDE HYDROLASE FAMILY 9 IN TITLE 2 COMPLEX WITH CELLOTRIOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOGLUCANASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS LICHENIFORMIS DSM 13 = ATCC 14580; SOURCE 3 ORGANISM_TAXID: 279010; SOURCE 4 STRAIN: ATCC 14580; SOURCE 5 GENE: CELA, BL01232; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS CELLULASE, GH9, BACILLUS LICHENIFORMIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.A.ARAUJO,I.POLIKARPOV REVDAT 1 14-FEB-24 8U4A 0 JRNL AUTH E.A.DE ARAUJO,A.A.CORTEZ,V.O.A.PELLEGRINI,M.M.VACILOTTO, JRNL AUTH 2 A.F.CRUZ,P.R.BATISTA,I.POLIKARPOV JRNL TITL MOLECULAR MECHANISM OF CELLULOSE DEPOLYMERIZATION BY THE JRNL TITL 2 TWO-DOMAIN BLCEL9A ENZYME FROM THE GLYCOSIDE HYDROLASE JRNL TITL 3 FAMILY 9. JRNL REF CARBOHYDR POLYM V. 329 21739 2024 JRNL REFN ESSN 1879-1344 JRNL PMID 38286536 JRNL DOI 10.1016/J.CARBPOL.2023.121739 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 48704 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2435 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.1900 - 5.0700 0.99 2964 156 0.1505 0.1768 REMARK 3 2 5.0600 - 4.0200 1.00 2911 153 0.1066 0.1248 REMARK 3 3 4.0200 - 3.5100 1.00 2889 151 0.1202 0.1406 REMARK 3 4 3.5100 - 3.1900 1.00 2877 152 0.1311 0.1939 REMARK 3 5 3.1900 - 2.9600 1.00 2895 152 0.1407 0.1861 REMARK 3 6 2.9600 - 2.7900 1.00 2892 152 0.1475 0.1796 REMARK 3 7 2.7900 - 2.6500 1.00 2874 151 0.1432 0.1717 REMARK 3 8 2.6500 - 2.5300 0.98 2859 151 0.1363 0.1937 REMARK 3 9 2.5300 - 2.4400 0.99 2839 149 0.1416 0.1871 REMARK 3 10 2.4400 - 2.3500 0.99 2839 150 0.1418 0.1833 REMARK 3 11 2.3500 - 2.2800 0.96 2750 145 0.1574 0.2096 REMARK 3 12 2.2800 - 2.2100 0.89 2548 134 0.2889 0.3519 REMARK 3 13 2.2100 - 2.1500 0.91 2605 137 0.1736 0.2323 REMARK 3 14 2.1500 - 2.1000 0.88 2530 134 0.1759 0.2153 REMARK 3 15 2.1000 - 2.0500 0.84 2405 126 0.2054 0.2444 REMARK 3 16 2.0500 - 2.0100 0.83 2358 124 0.2006 0.2433 REMARK 3 17 2.0100 - 1.9700 0.78 2234 118 0.2591 0.3792 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.214 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.899 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.31 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 5177 REMARK 3 ANGLE : 1.207 7059 REMARK 3 CHIRALITY : 0.068 710 REMARK 3 PLANARITY : 0.011 922 REMARK 3 DIHEDRAL : 13.262 1829 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 4:617) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1614 -0.7375 20.8635 REMARK 3 T TENSOR REMARK 3 T11: 0.0744 T22: 0.0590 REMARK 3 T33: 0.0892 T12: -0.0050 REMARK 3 T13: -0.0187 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.1784 L22: 0.2248 REMARK 3 L33: 0.5231 L12: 0.0326 REMARK 3 L13: -0.0873 L23: -0.1452 REMARK 3 S TENSOR REMARK 3 S11: 0.0177 S12: -0.0050 S13: 0.0092 REMARK 3 S21: -0.0039 S22: -0.0157 S23: 0.0165 REMARK 3 S31: 0.0225 S32: -0.0268 S33: -0.0974 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8U4A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1000277333. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.45867 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48767 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.970 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.07160 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 5.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 16.82 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1JS4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6 MG/ML PROTEIN, 100 MM TRIS, PH 8.5, REMARK 280 15% W/V PEG20000, CRYSTAL GROWTH WITHIN ~5 DAYS, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.55700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.58900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.55700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.58900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1393 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLU A 2 REMARK 465 GLU A 3 REMARK 465 GLY A 618 REMARK 465 TYR A 619 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 933 O HOH A 1412 2.03 REMARK 500 O HOH A 827 O HOH A 1294 2.07 REMARK 500 O HOH A 1479 O HOH A 1485 2.08 REMARK 500 O HOH A 1373 O HOH A 1436 2.08 REMARK 500 O HOH A 1337 O HOH A 1415 2.09 REMARK 500 O HOH A 993 O HOH A 1231 2.11 REMARK 500 O HOH A 1320 O HOH A 1415 2.11 REMARK 500 NH2 ARG A 26 O HOH A 801 2.14 REMARK 500 O HOH A 1179 O HOH A 1342 2.16 REMARK 500 O HOH A 1317 O HOH A 1357 2.17 REMARK 500 O HOH A 1387 O HOH A 1392 2.18 REMARK 500 O HOH A 1401 O HOH A 1405 2.18 REMARK 500 O HOH A 1309 O HOH A 1320 2.19 REMARK 500 O HOH A 1008 O HOH A 1345 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1430 O HOH A 1444 4545 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 30 32.59 -85.52 REMARK 500 ASN A 30 31.91 -85.52 REMARK 500 ALA A 58 -125.20 -149.05 REMARK 500 ASP A 60 -169.07 -114.27 REMARK 500 HIS A 110 67.52 -101.88 REMARK 500 CYS A 149 67.56 -151.43 REMARK 500 ASP A 173 79.34 -154.18 REMARK 500 CYS A 201 -69.31 -92.85 REMARK 500 TYR A 208 -47.03 -132.58 REMARK 500 TRP A 256 -153.35 -106.42 REMARK 500 ASN A 276 17.94 55.34 REMARK 500 SER A 292 -96.11 -108.17 REMARK 500 ASN A 298 -43.07 68.26 REMARK 500 ASN A 373 57.44 38.59 REMARK 500 GLU A 529 36.52 -93.58 REMARK 500 PHE A 552 54.45 -103.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1485 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH A1486 DISTANCE = 7.26 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 702 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 213 OG REMARK 620 2 GLY A 214 O 87.9 REMARK 620 3 ASP A 217 OD1 88.6 79.3 REMARK 620 4 ASP A 217 OD2 100.2 129.5 51.6 REMARK 620 5 GLU A 218 OE1 160.7 77.4 76.5 80.3 REMARK 620 6 GLU A 218 OE2 146.5 119.7 113.5 77.6 52.7 REMARK 620 7 ASP A 261 O 67.2 143.9 123.6 82.3 131.4 79.4 REMARK 620 8 HOH A 894 O 80.8 74.5 152.0 155.9 106.7 88.3 75.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 704 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 396 OD1 REMARK 620 2 ASP A 577 O 37.0 REMARK 620 3 HOH A1054 O 95.0 82.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 703 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 507 O REMARK 620 2 GLU A 510 OE1 77.2 REMARK 620 3 GLU A 510 OE2 98.4 50.9 REMARK 620 4 ASN A 583 O 172.5 101.2 86.0 REMARK 620 5 ASN A 586 OD1 98.3 83.4 125.4 74.2 REMARK 620 6 ASP A 587 OD1 83.4 151.5 154.7 95.2 78.9 REMARK 620 7 HOH A1007 O 96.4 127.4 79.6 90.4 148.3 75.1 REMARK 620 N 1 2 3 4 5 6 DBREF 8U4A A 1 619 UNP Q65JI9 Q65JI9_BACLD 36 654 SEQRES 1 A 619 ALA GLU GLU TYR PRO HIS ASN TYR ALA GLU LEU LEU GLN SEQRES 2 A 619 LYS SER LEU LEU PHE TYR GLU ALA GLN ARG SER GLY ARG SEQRES 3 A 619 LEU PRO GLU ASN SER ARG LEU ASN TRP ARG GLY ASP SER SEQRES 4 A 619 GLY LEU GLU ASP GLY LYS ASP VAL GLY LEU ASP LEU THR SEQRES 5 A 619 GLY GLY TRP TYR ASP ALA GLY ASP HIS VAL LYS PHE GLY SEQRES 6 A 619 LEU PRO MET ALA TYR SER ALA ALA ILE LEU SER TRP SER SEQRES 7 A 619 VAL TYR GLU TYR ARG ASP ALA TYR LYS GLU SER GLY GLN SEQRES 8 A 619 LEU ASP ALA ALA LEU ASP ASN ILE LYS TRP ALA THR ASP SEQRES 9 A 619 TYR PHE LEU LYS ALA HIS THR ALA PRO TYR GLU LEU TRP SEQRES 10 A 619 GLY GLN VAL GLY ASN GLY ALA LEU ASP HIS ALA TRP TRP SEQRES 11 A 619 GLY PRO ALA GLU VAL MET PRO MET LYS ARG PRO ALA TYR SEQRES 12 A 619 LYS ILE ASP ALA GLY CYS PRO GLY SER ASP LEU ALA GLY SEQRES 13 A 619 GLY THR ALA ALA ALA LEU ALA SER ALA SER ILE ILE PHE SEQRES 14 A 619 LYS PRO THR ASP SER SER TYR SER GLU LYS LEU LEU ALA SEQRES 15 A 619 HIS ALA LYS GLN LEU TYR ASP PHE ALA ASP ARG TYR ARG SEQRES 16 A 619 GLY LYS TYR SER ASP CYS ILE THR ASP ALA GLN GLN TYR SEQRES 17 A 619 TYR ASN SER TRP SER GLY TYR LYS ASP GLU LEU THR TRP SEQRES 18 A 619 GLY ALA VAL TRP LEU TYR LEU ALA THR GLU GLU GLN GLN SEQRES 19 A 619 TYR LEU ASP LYS ALA LEU ALA SER VAL SER ASP TRP GLY SEQRES 20 A 619 ASP PRO ALA ASN TRP PRO TYR ARG TRP THR LEU SER TRP SEQRES 21 A 619 ASP ASP VAL THR TYR GLY ALA GLN LEU LEU LEU ALA ARG SEQRES 22 A 619 LEU THR ASN ASP SER ARG PHE VAL LYS SER VAL GLU ARG SEQRES 23 A 619 ASN LEU ASP TYR TRP SER THR GLY TYR SER HIS ASN GLY SEQRES 24 A 619 SER ILE GLU ARG ILE THR TYR THR PRO GLY GLY LEU ALA SEQRES 25 A 619 TRP LEU GLU GLN TRP GLY SER LEU ARG TYR ALA SER ASN SEQRES 26 A 619 ALA ALA PHE LEU ALA PHE VAL TYR SER ASP TRP VAL ASP SEQRES 27 A 619 THR GLU LYS ALA LYS ARG TYR ARG ASP PHE ALA VAL ARG SEQRES 28 A 619 GLN THR GLU TYR MET LEU GLY ASP ASN PRO GLN GLN ARG SEQRES 29 A 619 SER PHE VAL VAL GLY TYR GLY LYS ASN PRO PRO LYS HIS SEQRES 30 A 619 PRO HIS HIS ARG THR ALA HIS GLY SER TRP ALA ASN GLN SEQRES 31 A 619 MET ASN VAL PRO GLU ASN HIS ARG HIS THR LEU TYR GLY SEQRES 32 A 619 ALA LEU VAL GLY GLY PRO GLY ARG ASP ASP SER TYR ARG SEQRES 33 A 619 ASP ASP ILE THR ASP TYR ALA SER ASN GLU VAL ALA ILE SEQRES 34 A 619 ASP TYR ASN ALA ALA PHE THR GLY ASN VAL ALA LYS MET SEQRES 35 A 619 PHE GLN LEU PHE GLY LYS GLY HIS VAL PRO LEU PRO ASP SEQRES 36 A 619 PHE PRO GLU LYS GLU THR PRO GLU ASP GLU TYR PHE ALA SEQRES 37 A 619 GLU ALA SER ILE ASN SER SER GLY ASN SER TYR THR GLU SEQRES 38 A 619 ILE ARG ALA GLN LEU ASN ASN ARG SER GLY TRP PRO ALA SEQRES 39 A 619 LYS LYS THR ASP GLN LEU SER PHE ARG TYR TYR VAL ASP SEQRES 40 A 619 LEU THR GLU ALA VAL GLU ALA GLY TYR SER ALA GLU ASP SEQRES 41 A 619 ILE LYS VAL THR ALA GLY TYR ASN GLU GLY ALA SER VAL SEQRES 42 A 619 SER GLU LEU LYS PRO HIS ASP ALA SER LYS HIS ILE TYR SEQRES 43 A 619 TYR THR GLU VAL SER PHE SER GLY VAL LEU ILE TYR PRO SEQRES 44 A 619 GLY GLY GLN SER ALA HIS LYS LYS GLU VAL GLN PHE ARG SEQRES 45 A 619 LEU SER ALA PRO ASP GLY THR SER PHE TRP ASN PRO GLU SEQRES 46 A 619 ASN ASP HIS SER TYR GLN GLY LEU SER HIS ALA LEU LEU SEQRES 47 A 619 LYS THR ARG TYR ILE PRO VAL TYR ASP ASP GLY ARG LEU SEQRES 48 A 619 VAL PHE GLY HIS GLU PRO GLY TYR HET BGC D 1 12 HET BGC D 2 11 HET BGC D 3 11 HET TRS A 701 8 HET CA A 702 1 HET CA A 703 1 HET NA A 704 1 HET CL A 705 1 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM CA CALCIUM ION HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN TRS TRIS BUFFER FORMUL 2 BGC 3(C6 H12 O6) FORMUL 3 TRS C4 H12 N O3 1+ FORMUL 4 CA 2(CA 2+) FORMUL 6 NA NA 1+ FORMUL 7 CL CL 1- FORMUL 8 HOH *686(H2 O) HELIX 1 AA1 ASN A 7 GLN A 22 1 16 HELIX 2 AA2 GLY A 44 GLY A 48 5 5 HELIX 3 AA3 GLY A 65 SER A 89 1 25 HELIX 4 AA4 GLN A 91 HIS A 110 1 20 HELIX 5 AA5 ASN A 122 ALA A 128 1 7 HELIX 6 AA6 PRO A 132 MET A 136 5 5 HELIX 7 AA7 GLY A 151 LYS A 170 1 20 HELIX 8 AA8 ASP A 173 TYR A 194 1 22 HELIX 9 AA9 LYS A 197 CYS A 201 5 5 HELIX 10 AB1 ILE A 202 TYR A 208 5 7 HELIX 11 AB2 TYR A 215 GLU A 231 1 17 HELIX 12 AB3 GLU A 232 ASP A 245 1 14 HELIX 13 AB4 TRP A 246 GLY A 247 5 2 HELIX 14 AB5 ASP A 248 TRP A 252 5 5 HELIX 15 AB6 VAL A 263 ASN A 276 1 14 HELIX 16 AB7 ASP A 277 SER A 292 1 16 HELIX 17 AB8 GLY A 318 VAL A 337 1 20 HELIX 18 AB9 THR A 339 LEU A 357 1 19 HELIX 19 AC1 HIS A 380 GLY A 385 1 6 HELIX 20 AC2 ASP A 421 GLU A 426 1 6 HELIX 21 AC3 ALA A 428 GLY A 447 1 20 HELIX 22 AC4 LEU A 508 ALA A 514 1 7 HELIX 23 AC5 SER A 517 ILE A 521 5 5 HELIX 24 AC6 ALA A 541 LYS A 543 5 3 HELIX 25 AC7 ASN A 583 GLN A 591 5 9 SHEET 1 AA1 3 LYS A 63 PHE A 64 0 SHEET 2 AA1 3 GLU A 115 VAL A 120 -1 O VAL A 120 N LYS A 63 SHEET 3 AA1 3 ALA A 142 ASP A 146 -1 O TYR A 143 N GLN A 119 SHEET 1 AA2 2 TYR A 295 SER A 296 0 SHEET 2 AA2 2 ILE A 301 GLU A 302 -1 O GLU A 302 N TYR A 295 SHEET 1 AA3 5 LYS A 522 ASN A 528 0 SHEET 2 AA3 5 LYS A 566 SER A 574 -1 O GLN A 570 N GLY A 526 SHEET 3 AA3 5 TYR A 479 ASN A 488 -1 N ILE A 482 O PHE A 571 SHEET 4 AA3 5 TYR A 466 SER A 475 -1 N PHE A 467 O ASN A 487 SHEET 5 AA3 5 LEU A 598 LYS A 599 -1 O LEU A 598 N ALA A 470 SHEET 1 AA4 3 SER A 532 VAL A 533 0 SHEET 2 AA4 3 ILE A 545 SER A 551 -1 O SER A 551 N SER A 532 SHEET 3 AA4 3 LYS A 537 ASP A 540 -1 N HIS A 539 O ILE A 545 SHEET 1 AA5 5 SER A 532 VAL A 533 0 SHEET 2 AA5 5 ILE A 545 SER A 551 -1 O SER A 551 N SER A 532 SHEET 3 AA5 5 LEU A 500 ASP A 507 -1 N VAL A 506 O TYR A 546 SHEET 4 AA5 5 VAL A 605 ASP A 607 -1 O TYR A 606 N SER A 501 SHEET 5 AA5 5 ARG A 610 PHE A 613 -1 O VAL A 612 N VAL A 605 SSBOND 1 CYS A 149 CYS A 201 1555 1555 2.02 LINK O4 BGC D 1 C1 BGC D 2 1555 1555 1.43 LINK O4 BGC D 2 C1 BGC D 3 1555 1555 1.43 LINK OG SER A 213 CA CA A 702 1555 1555 2.44 LINK O GLY A 214 CA CA A 702 1555 1555 2.42 LINK OD1 ASP A 217 CA CA A 702 1555 1555 2.51 LINK OD2 ASP A 217 CA CA A 702 1555 1555 2.53 LINK OE1 GLU A 218 CA CA A 702 1555 1555 2.40 LINK OE2 GLU A 218 CA CA A 702 1555 1555 2.53 LINK O ASP A 261 CA CA A 702 1555 1555 2.46 LINK OD1 ASN A 396 NA NA A 704 1555 1555 2.39 LINK O ASP A 507 CA CA A 703 1555 1555 2.31 LINK OE1 GLU A 510 CA CA A 703 1555 1555 2.70 LINK OE2 GLU A 510 CA CA A 703 1555 1555 2.44 LINK O ASP A 577 NA NA A 704 1555 4546 2.56 LINK O ASN A 583 CA CA A 703 1555 1555 2.37 LINK OD1 ASN A 586 CA CA A 703 1555 1555 2.35 LINK OD1 ASP A 587 CA CA A 703 1555 1555 2.48 LINK CA CA A 702 O HOH A 894 1555 1555 2.45 LINK CA CA A 703 O HOH A1007 1555 1555 2.31 LINK NA NA A 704 O HOH A1054 1555 1555 2.79 CISPEP 1 VAL A 393 PRO A 394 0 -5.23 CISPEP 2 PHE A 456 PRO A 457 0 -3.44 CISPEP 3 TRP A 492 PRO A 493 0 -0.32 CRYST1 133.114 67.178 100.838 90.00 125.00 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007512 0.000000 0.005260 0.00000 SCALE2 0.000000 0.014886 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012106 0.00000