HEADER SIGNALING PROTEIN 19-SEP-23 8U9O TITLE SOLUTION STRUCTURE OF RSGI9 CRE DOMAIN FROM C. THERMOCELLUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-SIGMA-I FACTOR RSGI9; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 167-188; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ANTI-SIGMA-I FACTOR RSGI9; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: UNP RESIDUES 189-343; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACETIVIBRIO THERMOCELLUS DSM 1313; SOURCE 3 ORGANISM_TAXID: 637887; SOURCE 4 GENE: RSGI9, CTHE_0260; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ACETIVIBRIO THERMOCELLUS DSM 1313; SOURCE 9 ORGANISM_TAXID: 637887; SOURCE 10 GENE: RSGI9; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS RSGI, CELLULOSOME, ANTI-SIGMA FACTOR, AUTO-PROTEOLYSIS, SIGNALING KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.TAKAYESU,B.J.MAHONEY,R.T.CLUBB REVDAT 3 10-JUL-24 8U9O 1 JRNL REVDAT 2 15-MAY-24 8U9O 1 REMARK REVDAT 1 24-APR-24 8U9O 0 JRNL AUTH A.TAKAYESU,B.J.MAHONEY,A.K.GORING,T.JESSUP, JRNL AUTH 2 R.R.OGORZALEK LOO,J.A.LOO,R.T.CLUBB JRNL TITL INSIGHT INTO THE AUTOPROTEOLYSIS MECHANISM OF THE RSGI9 JRNL TITL 2 ANTI-SIGMA FACTOR FROM CLOSTRIDIUM THERMOCELLUM. JRNL REF PROTEINS V. 92 946 2024 JRNL REFN ESSN 1097-0134 JRNL PMID 38597224 JRNL DOI 10.1002/PROT.26690 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH 3.6, MOLMOL, PROCHECK / PROCHECK-NMR REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X-PLOR REMARK 3 NIH), KORADI, BILLETER AND WUTHRICH (MOLMOL), REMARK 3 LASKOWSKI, MACARTHUR, SMITH, JONES, HUTCHINSON, REMARK 3 MORRIS, MOSS AND THORNTON (PROCHECK / PROCHECK-NMR) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8U9O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1000277571. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 298 REMARK 210 PH : 6.0; 6.0 REMARK 210 IONIC STRENGTH : 200; 200 REMARK 210 PRESSURE : 1 ATM; 1 ATM REMARK 210 SAMPLE CONTENTS : 200 UM [U-13C; U-15N] RSGI9 CRE, REMARK 210 0.03 % SODIUM AZIDE, 50 MM REMARK 210 SODIUM PHOSPHATE, 200 MM SODIUM REMARK 210 CHLORIDE, 8 % [U-2H] D2O, 93% REMARK 210 H2O/7% D2O; 200 UM [U-13C; U-15N] REMARK 210 RSGI9 CRE, 0.03 % SODIUM AZIDE, REMARK 210 50 MM SODIUM PHOSPHATE, 200 MM REMARK 210 SODIUM CHLORIDE, 100 % [U-2H] REMARK 210 D2O, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N TROSY; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 2D 1H-1H TOCSY; 2D 1H- REMARK 210 1H COSY; 3D HNCO; 3D HN(CA)CO; REMARK 210 3D HNCA; 3D HN(COCA)CB; 3D REMARK 210 HNCACB; 3D HCCH-COSY; 3D HNHA; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 1H-15N HETERONOE REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III HD; AVANCE NEO REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XIPP 1.21.7, CARA, TOPSPIN, REMARK 210 NMRPIPE, TALOS-N, UNIO, NMRFAM- REMARK 210 SPARKY REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 167 REMARK 465 ARG A 168 REMARK 465 ASN A 169 REMARK 465 VAL A 170 REMARK 465 MET A 171 REMARK 465 LEU A 172 REMARK 465 ASN A 173 REMARK 465 ASN A 174 REMARK 465 SER A 175 REMARK 465 SER A 176 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU B 220 70.24 171.44 REMARK 500 1 LYS B 246 90.38 65.49 REMARK 500 2 LEU B 220 57.58 166.47 REMARK 500 2 ASP B 245 85.33 -64.42 REMARK 500 2 LYS B 246 80.00 61.60 REMARK 500 3 LEU B 220 47.57 169.23 REMARK 500 3 LYS B 246 87.86 63.38 REMARK 500 4 LEU B 220 51.90 176.37 REMARK 500 5 LEU B 220 42.58 174.58 REMARK 500 6 HIS B 199 2.60 80.54 REMARK 500 6 LEU B 220 59.92 175.61 REMARK 500 6 ASP B 245 88.92 -57.82 REMARK 500 6 LYS B 246 78.95 68.60 REMARK 500 7 LEU B 220 58.16 -168.90 REMARK 500 7 LYS B 246 70.29 50.77 REMARK 500 8 LEU B 220 52.82 170.75 REMARK 500 8 LYS B 246 98.62 66.89 REMARK 500 9 ASN B 196 -168.94 -111.83 REMARK 500 9 LEU B 220 74.29 178.91 REMARK 500 10 LYS B 198 32.95 -79.90 REMARK 500 10 LEU B 220 56.69 178.77 REMARK 500 10 ASP B 245 -72.39 -175.48 REMARK 500 10 ASP B 326 98.13 -62.71 REMARK 500 11 LEU B 220 68.98 173.56 REMARK 500 11 LYS B 246 86.02 58.77 REMARK 500 11 GLU B 308 39.00 39.16 REMARK 500 12 LEU B 220 55.67 175.92 REMARK 500 12 LYS B 246 113.12 -175.11 REMARK 500 13 LEU B 220 72.83 175.55 REMARK 500 13 ASP B 245 83.68 -66.56 REMARK 500 13 LYS B 246 107.81 63.73 REMARK 500 13 ASN B 256 95.81 -66.26 REMARK 500 14 TYR A 180 -51.46 -121.11 REMARK 500 14 LEU B 220 81.74 176.56 REMARK 500 14 LYS B 223 52.52 -149.63 REMARK 500 15 ASN B 196 -163.11 -112.55 REMARK 500 15 LYS B 223 39.76 -151.88 REMARK 500 15 LYS B 246 108.50 176.51 REMARK 500 16 LEU B 220 47.31 179.13 REMARK 500 17 LYS B 223 50.25 -148.45 REMARK 500 17 LYS B 246 72.57 66.87 REMARK 500 18 LEU B 220 52.40 177.37 REMARK 500 18 LYS B 246 90.58 62.49 REMARK 500 18 ASP B 285 61.54 37.26 REMARK 500 19 LEU B 220 63.40 -166.32 REMARK 500 19 LYS B 223 46.74 -152.43 REMARK 500 19 ASP B 245 83.96 -66.50 REMARK 500 19 LYS B 246 75.65 57.90 REMARK 500 20 LEU B 220 56.02 179.35 REMARK 500 20 ASP B 245 80.54 -68.02 REMARK 500 REMARK 500 THIS ENTRY HAS 51 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 52129 RELATED DB: BMRB DBREF 8U9O A 167 188 UNP A3DC20 RSGI9_ACET2 167 188 DBREF 8U9O B 189 343 UNP A3DC20 RSGI9_ACET2 189 343 SEQADV 8U9O GLY A 177 UNP A3DC20 ASP 177 CONFLICT SEQRES 1 A 22 GLY ARG ASN VAL MET LEU ASN ASN SER SER GLY SER GLU SEQRES 2 A 22 TYR ALA TYR VAL SER VAL ASP VAL ASN SEQRES 1 B 155 PRO SER VAL GLU PHE THR ILE ASN SER LYS HIS LYS VAL SEQRES 2 B 155 ILE VAL THR SER ALA ILE ASN GLN ASP ALA SER GLU VAL SEQRES 3 B 155 LEU ASP GLY LEU GLU LEU LYS GLU LYS ASP LEU LYS SER SEQRES 4 B 155 ALA LEU VAL MET VAL LEU GLU LYS ALA GLU SER LEU GLY SEQRES 5 B 155 TYR ILE SER ASP ASP LYS ASN TYR VAL LEU VAL SER MET SEQRES 6 B 155 ALA LEU ASN ASP LYS ASN LYS LYS THR ARG ASP LYS ARG SEQRES 7 B 155 GLU GLU LYS ILE ASP GLU LEU LYS GLU THR ILE GLU GLN SEQRES 8 B 155 GLY ILE GLU ALA LEU ASP ASN ASP THR ILE VAL HIS ARG SEQRES 9 B 155 THR VAL THR VAL ASP LEU GLU GLU ARG ASN LYS ALA LEU SEQRES 10 B 155 GLU ASN GLU LEU SER MET GLY ARG TYR TYR LEU TYR LEU SEQRES 11 B 155 GLU ALA LYS GLU LYS GLY MET ASP ILE THR ILE ASP GLU SEQRES 12 B 155 VAL LYS SER SER LYS ILE SER ASP LEU ILE GLU LYS HELIX 1 AA1 ASN B 208 ASP B 216 1 9 HELIX 2 AA2 LEU B 220 GLU B 222 5 3 HELIX 3 AA3 LYS B 223 GLY B 240 1 18 HELIX 4 AA4 ASN B 259 ASP B 285 1 27 HELIX 5 AA5 ASP B 297 ASN B 307 1 11 HELIX 6 AA6 SER B 310 GLY B 324 1 15 HELIX 7 AA7 THR B 328 SER B 335 1 8 HELIX 8 AA8 LYS B 336 GLU B 342 1 7 SHEET 1 AA1 5 VAL B 201 ALA B 206 0 SHEET 2 AA1 5 SER B 190 ILE B 195 -1 N THR B 194 O ILE B 202 SHEET 3 AA1 5 ALA A 181 ASP A 186 -1 N VAL A 183 O PHE B 193 SHEET 4 AA1 5 ASN B 247 LEU B 255 -1 O LEU B 250 N ASP A 186 SHEET 5 AA1 5 ILE B 289 VAL B 296 1 O ARG B 292 N VAL B 251 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1