HEADER LIGASE 25-SEP-23 8UBV TITLE CRYO-EM STRUCTURE OF DIMERIC FBXL17-BACH1BTB E3 UBIQUITIN LIGASE TITLE 2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: F-BOX/LRR-REPEAT PROTEIN 17; COMPND 3 CHAIN: B, H; COMPND 4 FRAGMENT: UNP RESIDUES 310-701; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TRANSCRIPTION REGULATOR PROTEIN BACH1; COMPND 8 CHAIN: C, I; COMPND 9 FRAGMENT: BTB DOMAIN (UNP RESIDUES 7-128); COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FBXL17; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: BL21; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: BACH1; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS FBXL17, BACH1, F-BOX PROTEIN, CULLIN, E3 LIGASE, LIGASE EXPDTA ELECTRON MICROSCOPY AUTHOR H.SHI,S.CAO,N.ZHENG REVDAT 1 06-NOV-24 8UBV 0 JRNL AUTH S.CAO,H.SHI,S.F.GARCIA,Y.KITO,H.SHI,H.V.GOLDBERG,J.PONCE, JRNL AUTH 2 B.UEBERHEIDE,L.LIGNITTO,M.PAGANO,N.ZHENG JRNL TITL DISTINCT PERCEPTION MECHANISMS OF BACH1 QUATERNARY STRUCTURE JRNL TITL 2 DEGRONS BY TWO F-BOX PROTEINS UNDER OXIDATIVE STRESS. JRNL REF BIORXIV 2024 JRNL REFN ISSN 2692-8205 JRNL PMID 38895309 JRNL DOI 10.1101/2024.06.03.594717 REMARK 2 REMARK 2 RESOLUTION. 4.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SERIALEM, UCSF CHIMERA, PHENIX, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : BACK PROJECTION REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 6WCQ REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.100 REMARK 3 NUMBER OF PARTICLES : 71155 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8UBV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1000277771. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : THE STRUCTURE OF DIMERIC BFXL17 REMARK 245 -BACH1BTB REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 5000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 25000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS B 310 REMARK 465 HIS B 311 REMARK 465 ARG B 312 REMARK 465 GLU B 313 REMARK 465 PRO B 314 REMARK 465 PRO B 315 REMARK 465 PRO B 316 REMARK 465 GLU B 317 REMARK 465 THR B 318 REMARK 465 PRO B 319 REMARK 465 ASP B 320 REMARK 465 ILE B 321 REMARK 465 ASN B 322 REMARK 465 GLN B 323 REMARK 465 LEU B 324 REMARK 465 PRO B 325 REMARK 465 PRO B 326 REMARK 465 SER B 327 REMARK 465 ILE B 328 REMARK 465 LEU B 329 REMARK 465 LEU B 330 REMARK 465 LYS B 331 REMARK 465 ILE B 332 REMARK 465 PHE B 333 REMARK 465 SER B 334 REMARK 465 ASN B 335 REMARK 465 LEU B 336 REMARK 465 SER B 337 REMARK 465 LEU B 338 REMARK 465 ASP B 339 REMARK 465 GLU B 340 REMARK 465 ARG B 341 REMARK 465 CYS B 342 REMARK 465 LEU B 343 REMARK 465 SER B 344 REMARK 465 ALA B 345 REMARK 465 SER B 346 REMARK 465 LEU B 347 REMARK 465 VAL B 348 REMARK 465 CYS B 349 REMARK 465 LYS B 350 REMARK 465 TYR B 351 REMARK 465 TRP B 352 REMARK 465 ARG B 353 REMARK 465 ASP B 354 REMARK 465 LEU B 355 REMARK 465 CYS B 356 REMARK 465 LEU B 357 REMARK 465 ASP B 358 REMARK 465 PHE B 359 REMARK 465 GLN B 360 REMARK 465 PHE B 361 REMARK 465 TRP B 362 REMARK 465 ALA B 687 REMARK 465 TYR B 688 REMARK 465 GLN B 689 REMARK 465 MET B 690 REMARK 465 GLY B 691 REMARK 465 TRP B 692 REMARK 465 THR B 693 REMARK 465 PRO B 694 REMARK 465 ASN B 695 REMARK 465 MET B 696 REMARK 465 SER B 697 REMARK 465 ALA B 698 REMARK 465 ALA B 699 REMARK 465 SER B 700 REMARK 465 SER B 701 REMARK 465 SER C 7 REMARK 465 VAL C 8 REMARK 465 PHE C 9 REMARK 465 ALA C 10 REMARK 465 TYR C 11 REMARK 465 GLU C 12 REMARK 465 SER C 13 REMARK 465 SER C 14 REMARK 465 VAL C 15 REMARK 465 HIS C 16 REMARK 465 GLU C 119 REMARK 465 GLU C 120 REMARK 465 SER C 121 REMARK 465 CYS C 122 REMARK 465 PHE C 123 REMARK 465 GLN C 124 REMARK 465 PHE C 125 REMARK 465 LEU C 126 REMARK 465 LYS C 127 REMARK 465 PHE C 128 REMARK 465 CYS H 310 REMARK 465 HIS H 311 REMARK 465 ARG H 312 REMARK 465 GLU H 313 REMARK 465 PRO H 314 REMARK 465 PRO H 315 REMARK 465 PRO H 316 REMARK 465 GLU H 317 REMARK 465 THR H 318 REMARK 465 PRO H 319 REMARK 465 ASP H 320 REMARK 465 ILE H 321 REMARK 465 ASN H 322 REMARK 465 GLN H 323 REMARK 465 LEU H 324 REMARK 465 PRO H 325 REMARK 465 PRO H 326 REMARK 465 SER H 327 REMARK 465 ILE H 328 REMARK 465 LEU H 329 REMARK 465 LEU H 330 REMARK 465 LYS H 331 REMARK 465 ILE H 332 REMARK 465 PHE H 333 REMARK 465 SER H 334 REMARK 465 ASN H 335 REMARK 465 LEU H 336 REMARK 465 SER H 337 REMARK 465 LEU H 338 REMARK 465 ASP H 339 REMARK 465 GLU H 340 REMARK 465 ARG H 341 REMARK 465 CYS H 342 REMARK 465 LEU H 343 REMARK 465 SER H 344 REMARK 465 ALA H 345 REMARK 465 SER H 346 REMARK 465 LEU H 347 REMARK 465 VAL H 348 REMARK 465 CYS H 349 REMARK 465 LYS H 350 REMARK 465 TYR H 351 REMARK 465 TRP H 352 REMARK 465 ARG H 353 REMARK 465 ASP H 354 REMARK 465 LEU H 355 REMARK 465 CYS H 356 REMARK 465 LEU H 357 REMARK 465 ASP H 358 REMARK 465 PHE H 359 REMARK 465 GLN H 360 REMARK 465 PHE H 361 REMARK 465 TRP H 362 REMARK 465 ARG H 686 REMARK 465 ALA H 687 REMARK 465 TYR H 688 REMARK 465 GLN H 689 REMARK 465 MET H 690 REMARK 465 GLY H 691 REMARK 465 TRP H 692 REMARK 465 THR H 693 REMARK 465 PRO H 694 REMARK 465 ASN H 695 REMARK 465 MET H 696 REMARK 465 SER H 697 REMARK 465 ALA H 698 REMARK 465 ALA H 699 REMARK 465 SER H 700 REMARK 465 SER H 701 REMARK 465 SER I 7 REMARK 465 VAL I 8 REMARK 465 PHE I 9 REMARK 465 ALA I 10 REMARK 465 TYR I 11 REMARK 465 GLU I 12 REMARK 465 SER I 13 REMARK 465 SER I 14 REMARK 465 VAL I 15 REMARK 465 GLU I 119 REMARK 465 GLU I 120 REMARK 465 SER I 121 REMARK 465 CYS I 122 REMARK 465 PHE I 123 REMARK 465 GLN I 124 REMARK 465 PHE I 125 REMARK 465 LEU I 126 REMARK 465 LYS I 127 REMARK 465 PHE I 128 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 370 NH1 NH2 REMARK 470 ARG B 384 NH1 NH2 REMARK 470 ARG B 397 NH1 NH2 REMARK 470 ARG B 416 NH1 NH2 REMARK 470 TYR B 417 OH REMARK 470 TYR B 420 OH REMARK 470 ARG B 421 NH1 NH2 REMARK 470 ARG B 464 NH1 NH2 REMARK 470 TYR B 475 OH REMARK 470 ARG B 494 NH1 NH2 REMARK 470 TYR B 496 OH REMARK 470 TYR B 520 OH REMARK 470 ARG B 540 NH1 NH2 REMARK 470 ARG B 548 NH1 NH2 REMARK 470 ARG B 564 NH1 NH2 REMARK 470 TRP B 577 CH2 REMARK 470 ARG B 582 NH1 NH2 REMARK 470 TYR B 598 OH REMARK 470 TYR B 607 OH REMARK 470 ARG B 614 NH1 NH2 REMARK 470 TYR B 615 OH REMARK 470 TRP B 626 CH2 REMARK 470 ARG B 646 NH1 NH2 REMARK 470 TYR B 647 OH REMARK 470 ARG B 652 NH1 NH2 REMARK 470 TYR B 668 OH REMARK 470 ARG B 682 NH1 NH2 REMARK 470 ARG B 686 NH1 NH2 REMARK 470 ARG C 28 NH1 NH2 REMARK 470 ARG C 44 NH1 NH2 REMARK 470 ARG C 46 NH1 NH2 REMARK 470 ARG C 49 NH1 NH2 REMARK 470 TYR C 58 OH REMARK 470 ARG C 62 NH1 NH2 REMARK 470 TYR C 92 OH REMARK 470 ARG H 370 NH1 NH2 REMARK 470 ARG H 384 NH1 NH2 REMARK 470 ARG H 397 NH1 NH2 REMARK 470 ARG H 416 NH1 NH2 REMARK 470 TYR H 417 OH REMARK 470 TYR H 420 OH REMARK 470 ARG H 421 NH1 NH2 REMARK 470 ARG H 464 NH1 NH2 REMARK 470 TYR H 475 OH REMARK 470 ARG H 494 NH1 NH2 REMARK 470 TYR H 496 OH REMARK 470 TYR H 520 OH REMARK 470 ARG H 540 NH1 NH2 REMARK 470 ARG H 548 NH1 NH2 REMARK 470 ARG H 564 NH1 NH2 REMARK 470 TRP H 577 CH2 REMARK 470 ARG H 582 NH1 NH2 REMARK 470 TYR H 598 OH REMARK 470 TYR H 607 OH REMARK 470 ARG H 614 NH1 NH2 REMARK 470 TYR H 615 OH REMARK 470 TRP H 626 CH2 REMARK 470 ARG H 646 NH1 NH2 REMARK 470 TYR H 647 OH REMARK 470 ARG H 652 NH1 NH2 REMARK 470 TYR H 668 OH REMARK 470 ARG H 682 NH1 NH2 REMARK 470 ARG I 28 NH1 NH2 REMARK 470 ARG I 44 NH1 NH2 REMARK 470 ARG I 46 NH1 NH2 REMARK 470 ARG I 49 NH1 NH2 REMARK 470 TYR I 58 OH REMARK 470 ARG I 62 NH1 NH2 REMARK 470 TYR I 92 OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN H 592 OG1 THR H 618 1.96 REMARK 500 O ILE B 619 OG SER B 644 2.08 REMARK 500 OD1 ASN C 25 NZ LYS C 29 2.09 REMARK 500 OG1 THR H 452 OE1 GLU H 454 2.11 REMARK 500 O LYS H 566 ND2 ASN H 593 2.12 REMARK 500 O TYR C 58 OG SER C 61 2.14 REMARK 500 O GLN B 592 OG1 THR B 618 2.17 REMARK 500 OD1 ASP B 401 OG1 THR B 428 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS C 109 CA - CB - SG ANGL. DEV. = 7.1 DEGREES REMARK 500 HIS C 116 C - N - CA ANGL. DEV. = 20.4 DEGREES REMARK 500 LEU H 367 CA - CB - CG ANGL. DEV. = 14.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN B 371 -135.01 43.55 REMARK 500 GLN B 372 58.90 -93.71 REMARK 500 LEU B 378 -5.19 -55.30 REMARK 500 ALA B 382 59.81 -100.84 REMARK 500 ASN B 387 46.56 -145.09 REMARK 500 ARG B 397 14.57 -142.38 REMARK 500 SER B 400 -169.87 -123.80 REMARK 500 CYS B 411 70.04 51.58 REMARK 500 HIS B 444 79.88 -68.53 REMARK 500 THR B 452 -177.36 -68.40 REMARK 500 ARG B 464 48.97 -93.74 REMARK 500 ASP B 479 -40.02 -130.24 REMARK 500 LYS B 487 -77.03 -68.64 REMARK 500 GLU B 499 69.27 -68.75 REMARK 500 LEU B 502 -4.63 65.36 REMARK 500 VAL B 508 -53.16 -124.52 REMARK 500 HIS B 514 -62.83 -103.28 REMARK 500 SER B 527 41.06 -98.78 REMARK 500 LYS B 538 -70.72 -64.80 REMARK 500 HIS B 549 70.84 61.16 REMARK 500 GLU B 552 72.14 52.13 REMARK 500 ASN B 572 -63.92 -94.99 REMARK 500 LEU B 573 41.70 38.52 REMARK 500 SER B 601 18.97 59.08 REMARK 500 PHE B 673 153.48 65.33 REMARK 500 SER B 674 26.22 -143.98 REMARK 500 ASP B 679 48.89 -80.28 REMARK 500 CYS B 680 -40.49 -131.58 REMARK 500 LYS C 29 43.77 -85.77 REMARK 500 ASP C 35 -64.35 -92.48 REMARK 500 CYS C 107 57.39 -95.87 REMARK 500 LYS C 108 -11.88 -143.71 REMARK 500 GLU C 111 -8.84 66.89 REMARK 500 PHE C 112 46.81 38.67 REMARK 500 SER C 114 -85.42 72.66 REMARK 500 HIS C 116 38.13 -144.24 REMARK 500 GLN H 371 -136.02 42.53 REMARK 500 ARG H 397 14.47 -141.61 REMARK 500 SER H 400 -164.23 -128.62 REMARK 500 HIS H 444 82.71 -67.48 REMARK 500 ARG H 464 55.20 -96.05 REMARK 500 PHE H 471 50.44 -116.66 REMARK 500 TYR H 475 47.72 -85.87 REMARK 500 LYS H 476 18.79 -145.01 REMARK 500 GLN H 498 -156.19 -145.17 REMARK 500 GLU H 499 63.65 -67.08 REMARK 500 VAL H 508 -57.56 -129.07 REMARK 500 GLN H 519 -45.76 -130.68 REMARK 500 PHE H 523 44.17 -144.67 REMARK 500 SER H 527 43.49 -100.61 REMARK 500 REMARK 500 THIS ENTRY HAS 66 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE B 485 ALA B 486 145.21 REMARK 500 VAL C 115 HIS C 116 -31.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-42105 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-42106 RELATED DB: EMDB REMARK 900 STRUCTURE OF DIMERIC FBXL17-BACH1BTB E3 LIGASE COMPLEX REMARK 900 RELATED ID: EMD-42102 RELATED DB: EMDB DBREF 8UBV B 310 701 UNP Q9UF56 FXL17_HUMAN 310 701 DBREF 8UBV C 7 128 UNP O14867 BACH1_HUMAN 7 128 DBREF 8UBV H 310 701 UNP Q9UF56 FXL17_HUMAN 310 701 DBREF 8UBV I 7 128 UNP O14867 BACH1_HUMAN 7 128 SEQRES 1 B 392 CYS HIS ARG GLU PRO PRO PRO GLU THR PRO ASP ILE ASN SEQRES 2 B 392 GLN LEU PRO PRO SER ILE LEU LEU LYS ILE PHE SER ASN SEQRES 3 B 392 LEU SER LEU ASP GLU ARG CYS LEU SER ALA SER LEU VAL SEQRES 4 B 392 CYS LYS TYR TRP ARG ASP LEU CYS LEU ASP PHE GLN PHE SEQRES 5 B 392 TRP LYS GLN LEU ASP LEU SER SER ARG GLN GLN VAL THR SEQRES 6 B 392 ASP GLU LEU LEU GLU LYS ILE ALA SER ARG SER GLN ASN SEQRES 7 B 392 ILE ILE GLU ILE ASN ILE SER ASP CYS ARG SER MET SER SEQRES 8 B 392 ASP ASN GLY VAL CYS VAL LEU ALA PHE LYS CYS PRO GLY SEQRES 9 B 392 LEU LEU ARG TYR THR ALA TYR ARG CYS LYS GLN LEU SER SEQRES 10 B 392 ASP THR SER ILE ILE ALA VAL ALA SER HIS CYS PRO LEU SEQRES 11 B 392 LEU GLN LYS VAL HIS VAL GLY ASN GLN ASP LYS LEU THR SEQRES 12 B 392 ASP GLU GLY LEU LYS GLN LEU GLY SER LYS CYS ARG GLU SEQRES 13 B 392 LEU LYS ASP ILE HIS PHE GLY GLN CYS TYR LYS ILE SER SEQRES 14 B 392 ASP GLU GLY MET ILE VAL ILE ALA LYS GLY CYS LEU LYS SEQRES 15 B 392 LEU GLN ARG ILE TYR MET GLN GLU ASN LYS LEU VAL THR SEQRES 16 B 392 ASP GLN SER VAL LYS ALA PHE ALA GLU HIS CYS PRO GLU SEQRES 17 B 392 LEU GLN TYR VAL GLY PHE MET GLY CYS SER VAL THR SER SEQRES 18 B 392 LYS GLY VAL ILE HIS LEU THR LYS LEU ARG ASN LEU SER SEQRES 19 B 392 SER LEU ASP LEU ARG HIS ILE THR GLU LEU ASP ASN GLU SEQRES 20 B 392 THR VAL MET GLU ILE VAL LYS ARG CYS LYS ASN LEU SER SEQRES 21 B 392 SER LEU ASN LEU CYS LEU ASN TRP ILE ILE ASN ASP ARG SEQRES 22 B 392 CYS VAL GLU VAL ILE ALA LYS GLU GLY GLN ASN LEU LYS SEQRES 23 B 392 GLU LEU TYR LEU VAL SER CYS LYS ILE THR ASP TYR ALA SEQRES 24 B 392 LEU ILE ALA ILE GLY ARG TYR SER MET THR ILE GLU THR SEQRES 25 B 392 VAL ASP VAL GLY TRP CYS LYS GLU ILE THR ASP GLN GLY SEQRES 26 B 392 ALA THR LEU ILE ALA GLN SER SER LYS SER LEU ARG TYR SEQRES 27 B 392 LEU GLY LEU MET ARG CYS ASP LYS VAL ASN GLU VAL THR SEQRES 28 B 392 VAL GLU GLN LEU VAL GLN GLN TYR PRO HIS ILE THR PHE SEQRES 29 B 392 SER THR VAL LEU GLN ASP CYS LYS ARG THR LEU GLU ARG SEQRES 30 B 392 ALA TYR GLN MET GLY TRP THR PRO ASN MET SER ALA ALA SEQRES 31 B 392 SER SER SEQRES 1 C 122 SER VAL PHE ALA TYR GLU SER SER VAL HIS SER THR ASN SEQRES 2 C 122 VAL LEU LEU SER LEU ASN ASP GLN ARG LYS LYS ASP VAL SEQRES 3 C 122 LEU CYS ASP VAL THR ILE PHE VAL GLU GLY GLN ARG PHE SEQRES 4 C 122 ARG ALA HIS ARG SER VAL LEU ALA ALA CYS SER SER TYR SEQRES 5 C 122 PHE HIS SER ARG ILE VAL GLY GLN ALA ASP GLY GLU LEU SEQRES 6 C 122 ASN ILE THR LEU PRO GLU GLU VAL THR VAL LYS GLY PHE SEQRES 7 C 122 GLU PRO LEU ILE GLN PHE ALA TYR THR ALA LYS LEU ILE SEQRES 8 C 122 LEU SER LYS GLU ASN VAL ASP GLU VAL CYS LYS CYS VAL SEQRES 9 C 122 GLU PHE LEU SER VAL HIS ASN ILE GLU GLU SER CYS PHE SEQRES 10 C 122 GLN PHE LEU LYS PHE SEQRES 1 H 392 CYS HIS ARG GLU PRO PRO PRO GLU THR PRO ASP ILE ASN SEQRES 2 H 392 GLN LEU PRO PRO SER ILE LEU LEU LYS ILE PHE SER ASN SEQRES 3 H 392 LEU SER LEU ASP GLU ARG CYS LEU SER ALA SER LEU VAL SEQRES 4 H 392 CYS LYS TYR TRP ARG ASP LEU CYS LEU ASP PHE GLN PHE SEQRES 5 H 392 TRP LYS GLN LEU ASP LEU SER SER ARG GLN GLN VAL THR SEQRES 6 H 392 ASP GLU LEU LEU GLU LYS ILE ALA SER ARG SER GLN ASN SEQRES 7 H 392 ILE ILE GLU ILE ASN ILE SER ASP CYS ARG SER MET SER SEQRES 8 H 392 ASP ASN GLY VAL CYS VAL LEU ALA PHE LYS CYS PRO GLY SEQRES 9 H 392 LEU LEU ARG TYR THR ALA TYR ARG CYS LYS GLN LEU SER SEQRES 10 H 392 ASP THR SER ILE ILE ALA VAL ALA SER HIS CYS PRO LEU SEQRES 11 H 392 LEU GLN LYS VAL HIS VAL GLY ASN GLN ASP LYS LEU THR SEQRES 12 H 392 ASP GLU GLY LEU LYS GLN LEU GLY SER LYS CYS ARG GLU SEQRES 13 H 392 LEU LYS ASP ILE HIS PHE GLY GLN CYS TYR LYS ILE SER SEQRES 14 H 392 ASP GLU GLY MET ILE VAL ILE ALA LYS GLY CYS LEU LYS SEQRES 15 H 392 LEU GLN ARG ILE TYR MET GLN GLU ASN LYS LEU VAL THR SEQRES 16 H 392 ASP GLN SER VAL LYS ALA PHE ALA GLU HIS CYS PRO GLU SEQRES 17 H 392 LEU GLN TYR VAL GLY PHE MET GLY CYS SER VAL THR SER SEQRES 18 H 392 LYS GLY VAL ILE HIS LEU THR LYS LEU ARG ASN LEU SER SEQRES 19 H 392 SER LEU ASP LEU ARG HIS ILE THR GLU LEU ASP ASN GLU SEQRES 20 H 392 THR VAL MET GLU ILE VAL LYS ARG CYS LYS ASN LEU SER SEQRES 21 H 392 SER LEU ASN LEU CYS LEU ASN TRP ILE ILE ASN ASP ARG SEQRES 22 H 392 CYS VAL GLU VAL ILE ALA LYS GLU GLY GLN ASN LEU LYS SEQRES 23 H 392 GLU LEU TYR LEU VAL SER CYS LYS ILE THR ASP TYR ALA SEQRES 24 H 392 LEU ILE ALA ILE GLY ARG TYR SER MET THR ILE GLU THR SEQRES 25 H 392 VAL ASP VAL GLY TRP CYS LYS GLU ILE THR ASP GLN GLY SEQRES 26 H 392 ALA THR LEU ILE ALA GLN SER SER LYS SER LEU ARG TYR SEQRES 27 H 392 LEU GLY LEU MET ARG CYS ASP LYS VAL ASN GLU VAL THR SEQRES 28 H 392 VAL GLU GLN LEU VAL GLN GLN TYR PRO HIS ILE THR PHE SEQRES 29 H 392 SER THR VAL LEU GLN ASP CYS LYS ARG THR LEU GLU ARG SEQRES 30 H 392 ALA TYR GLN MET GLY TRP THR PRO ASN MET SER ALA ALA SEQRES 31 H 392 SER SER SEQRES 1 I 122 SER VAL PHE ALA TYR GLU SER SER VAL HIS SER THR ASN SEQRES 2 I 122 VAL LEU LEU SER LEU ASN ASP GLN ARG LYS LYS ASP VAL SEQRES 3 I 122 LEU CYS ASP VAL THR ILE PHE VAL GLU GLY GLN ARG PHE SEQRES 4 I 122 ARG ALA HIS ARG SER VAL LEU ALA ALA CYS SER SER TYR SEQRES 5 I 122 PHE HIS SER ARG ILE VAL GLY GLN ALA ASP GLY GLU LEU SEQRES 6 I 122 ASN ILE THR LEU PRO GLU GLU VAL THR VAL LYS GLY PHE SEQRES 7 I 122 GLU PRO LEU ILE GLN PHE ALA TYR THR ALA LYS LEU ILE SEQRES 8 I 122 LEU SER LYS GLU ASN VAL ASP GLU VAL CYS LYS CYS VAL SEQRES 9 I 122 GLU PHE LEU SER VAL HIS ASN ILE GLU GLU SER CYS PHE SEQRES 10 I 122 GLN PHE LEU LYS PHE HELIX 1 AA1 LEU B 377 ALA B 382 1 6 HELIX 2 AA2 SER B 400 PHE B 409 1 10 HELIX 3 AA3 SER B 426 HIS B 436 1 11 HELIX 4 AA4 ASP B 453 CYS B 463 1 11 HELIX 5 AA5 ASP B 479 GLY B 488 1 10 HELIX 6 AA6 ASP B 505 ALA B 510 1 6 HELIX 7 AA7 THR B 529 ILE B 534 1 6 HELIX 8 AA8 HIS B 535 LYS B 538 5 4 HELIX 9 AA9 ASP B 554 CYS B 565 1 12 HELIX 10 AB1 ASN B 580 ALA B 588 1 9 HELIX 11 AB2 TYR B 607 SER B 616 1 10 HELIX 12 AB3 THR B 631 SER B 642 1 12 HELIX 13 AB4 VAL B 659 TYR B 668 1 10 HELIX 14 AB5 CYS B 680 ARG B 686 1 7 HELIX 15 AB6 THR C 18 LYS C 29 1 12 HELIX 16 AB7 ARG C 49 SER C 56 1 8 HELIX 17 AB8 SER C 56 VAL C 64 1 9 HELIX 18 AB9 THR C 80 ALA C 94 1 15 HELIX 19 AC1 VAL C 103 CYS C 107 5 5 HELIX 20 AC2 LEU H 377 ALA H 382 1 6 HELIX 21 AC3 SER H 400 PHE H 409 1 10 HELIX 22 AC4 ASP H 427 HIS H 436 1 10 HELIX 23 AC5 THR H 452 CYS H 463 1 12 HELIX 24 AC6 ASP H 479 GLY H 488 1 10 HELIX 25 AC7 THR H 504 VAL H 508 5 5 HELIX 26 AC8 THR H 529 LEU H 536 1 8 HELIX 27 AC9 ASP H 554 CYS H 565 1 12 HELIX 28 AD1 ASN H 580 GLY H 591 1 12 HELIX 29 AD2 TYR H 607 SER H 616 1 10 HELIX 30 AD3 THR H 631 SER H 642 1 12 HELIX 31 AD4 VAL H 659 TYR H 668 1 10 HELIX 32 AD5 SER I 17 LYS I 29 1 13 HELIX 33 AD6 ARG I 49 SER I 56 1 8 HELIX 34 AD7 SER I 56 GLY I 65 1 10 HELIX 35 AD8 THR I 80 ALA I 94 1 15 HELIX 36 AD9 VAL I 103 CYS I 107 5 5 SHEET 1 AA1 3 SER B 570 LEU B 571 0 SHEET 2 AA1 3 GLU B 596 LEU B 599 1 O GLU B 596 N LEU B 571 SHEET 3 AA1 3 THR B 621 VAL B 624 1 O ASP B 623 N LEU B 599 SHEET 1 AA2 3 GLN C 43 ALA C 47 0 SHEET 2 AA2 3 VAL C 36 VAL C 40 -1 N VAL C 36 O ALA C 47 SHEET 3 AA2 3 ILE C 73 THR C 74 1 O ILE C 73 N PHE C 39 SHEET 1 AA3 2 LYS C 95 LEU C 96 0 SHEET 2 AA3 2 LEU I 98 SER I 99 -1 O LEU I 98 N LEU C 96 SHEET 1 AA4 2 VAL H 443 HIS H 444 0 SHEET 2 AA4 2 ILE H 469 HIS H 470 1 N HIS H 470 O VAL H 443 SHEET 1 AA5 6 ARG H 494 TYR H 496 0 SHEET 2 AA5 6 TYR H 520 GLY H 522 1 O GLY H 522 N ILE H 495 SHEET 3 AA5 6 SER H 544 ASP H 546 1 O SER H 544 N VAL H 521 SHEET 4 AA5 6 SER H 570 LEU H 571 1 O SER H 570 N LEU H 545 SHEET 5 AA5 6 GLU H 596 LEU H 599 1 O GLU H 596 N LEU H 571 SHEET 6 AA5 6 THR H 621 VAL H 624 1 O ASP H 623 N LEU H 597 SHEET 1 AA6 3 GLN I 43 ALA I 47 0 SHEET 2 AA6 3 VAL I 36 VAL I 40 -1 N ILE I 38 O PHE I 45 SHEET 3 AA6 3 LEU I 71 THR I 74 1 O ILE I 73 N PHE I 39 SSBOND 1 CYS B 396 CYS B 422 1555 1555 2.03 SSBOND 2 CYS C 107 CYS I 109 1555 1555 2.03 SSBOND 3 CYS C 109 CYS I 107 1555 1555 2.05 SSBOND 4 CYS H 396 CYS H 422 1555 1555 2.03 CISPEP 1 VAL I 115 HIS I 116 0 -7.42 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000