HEADER MEMBRANE PROTEIN 26-SEP-23 8UCJ TITLE CRYOEM STRUCTURE OF KOMAGATAELLA PASTORIS CYTOCHROME C OXIDASE (11 TITLE 2 SUBUNITS) IN COMPLEX WITH HUMAN VMAT2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SYNAPTIC VESICULAR AMINE TRANSPORTER; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 1; COMPND 7 CHAIN: a; COMPND 8 MOL_ID: 3; COMPND 9 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 2; COMPND 10 CHAIN: b; COMPND 11 MOL_ID: 4; COMPND 12 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 3; COMPND 13 CHAIN: c; COMPND 14 MOL_ID: 5; COMPND 15 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 4; COMPND 16 CHAIN: d; COMPND 17 MOL_ID: 6; COMPND 18 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 5; COMPND 19 CHAIN: e; COMPND 20 MOL_ID: 7; COMPND 21 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 6; COMPND 22 CHAIN: f; COMPND 23 MOL_ID: 8; COMPND 24 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 7; COMPND 25 CHAIN: g; COMPND 26 MOL_ID: 9; COMPND 27 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 8; COMPND 28 CHAIN: h; COMPND 29 MOL_ID: 10; COMPND 30 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 9; COMPND 31 CHAIN: i; COMPND 32 MOL_ID: 11; COMPND 33 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 12; COMPND 34 CHAIN: j; COMPND 35 MOL_ID: 12; COMPND 36 MOLECULE: CYTOCHROME C OXIDASE SUBUNIT 13; COMPND 37 CHAIN: k SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SLC18A2; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: KOMAGATAELLA PASTORIS; SOURCE 10 ORGANISM_TAXID: 4922; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: KOMAGATAELLA PASTORIS; SOURCE 13 ORGANISM_TAXID: 4922; SOURCE 14 MOL_ID: 4; SOURCE 15 ORGANISM_SCIENTIFIC: KOMAGATAELLA PASTORIS; SOURCE 16 ORGANISM_TAXID: 4922; SOURCE 17 MOL_ID: 5; SOURCE 18 ORGANISM_SCIENTIFIC: KOMAGATAELLA PASTORIS; SOURCE 19 ORGANISM_TAXID: 4922; SOURCE 20 MOL_ID: 6; SOURCE 21 ORGANISM_SCIENTIFIC: KOMAGATAELLA PASTORIS; SOURCE 22 ORGANISM_TAXID: 4922; SOURCE 23 MOL_ID: 7; SOURCE 24 ORGANISM_SCIENTIFIC: KOMAGATAELLA PASTORIS; SOURCE 25 ORGANISM_TAXID: 4922; SOURCE 26 MOL_ID: 8; SOURCE 27 ORGANISM_SCIENTIFIC: KOMAGATAELLA PASTORIS; SOURCE 28 ORGANISM_TAXID: 4922; SOURCE 29 MOL_ID: 9; SOURCE 30 ORGANISM_SCIENTIFIC: KOMAGATAELLA PASTORIS; SOURCE 31 ORGANISM_TAXID: 4922; SOURCE 32 MOL_ID: 10; SOURCE 33 ORGANISM_SCIENTIFIC: KOMAGATAELLA PASTORIS; SOURCE 34 ORGANISM_TAXID: 4922; SOURCE 35 MOL_ID: 11; SOURCE 36 ORGANISM_SCIENTIFIC: KOMAGATAELLA PASTORIS; SOURCE 37 ORGANISM_TAXID: 4922; SOURCE 38 MOL_ID: 12; SOURCE 39 ORGANISM_SCIENTIFIC: KOMAGATAELLA PASTORIS; SOURCE 40 ORGANISM_TAXID: 4922 KEYWDS VMAT, SLC18, VASCULAR MONOAMINE TRANSPORTER, CYTOCHROME C OXIDASE- KEYWDS 2 VMAT2 COMPLEX, MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR J.YE,B.LIU,W.LI REVDAT 1 09-OCT-24 8UCJ 0 JRNL AUTH J.YE,B.LIU,W.LI JRNL TITL CRYOEM STRUCTURE OF KOMAGATAELLA PASTORIS CYTOCHROME C JRNL TITL 2 OXIDASE (11 SUBUNITS) IN COMPLEX WITH HUMAN VMAT2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, PHENIX, EPU, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.200 REMARK 3 NUMBER OF PARTICLES : 141043 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8UCJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1000277556. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : KOMAGATAELLA PASTORIS REMARK 245 CYTOCHROME C OXIDASE (11 REMARK 245 SUBUNITS) IN COMPLEX WITH HUMAN REMARK 245 VMAT2 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 5.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 4614 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 81000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, a, b, c, d, e, f, g, h, i, REMARK 350 AND CHAINS: j, k REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 3 REMARK 465 SER A 4 REMARK 465 GLU A 5 REMARK 465 LEU A 6 REMARK 465 ALA A 7 REMARK 465 LEU A 8 REMARK 465 VAL A 9 REMARK 465 ARG A 10 REMARK 465 TRP A 11 REMARK 465 LEU A 12 REMARK 465 GLN A 13 REMARK 465 GLU A 14 REMARK 465 SER A 15 REMARK 465 ARG A 16 REMARK 465 ARG A 17 REMARK 465 ILE A 44 REMARK 465 PRO A 45 REMARK 465 SER A 46 REMARK 465 TYR A 47 REMARK 465 LEU A 48 REMARK 465 TYR A 49 REMARK 465 SER A 50 REMARK 465 ILE A 51 REMARK 465 LYS A 52 REMARK 465 HIS A 53 REMARK 465 GLU A 54 REMARK 465 LYS A 55 REMARK 465 ASN A 56 REMARK 465 ALA A 57 REMARK 465 THR A 58 REMARK 465 GLU A 59 REMARK 465 ILE A 60 REMARK 465 GLN A 61 REMARK 465 THR A 62 REMARK 465 ALA A 63 REMARK 465 ARG A 64 REMARK 465 PRO A 65 REMARK 465 VAL A 66 REMARK 465 HIS A 67 REMARK 465 THR A 68 REMARK 465 ALA A 69 REMARK 465 SER A 70 REMARK 465 ILE A 71 REMARK 465 SER A 72 REMARK 465 ASP A 73 REMARK 465 SER A 74 REMARK 465 PHE A 75 REMARK 465 GLN A 76 REMARK 465 SER A 77 REMARK 465 ILE A 78 REMARK 465 PHE A 79 REMARK 465 SER A 80 REMARK 465 TYR A 81 REMARK 465 TYR A 82 REMARK 465 ASP A 83 REMARK 465 ASN A 84 REMARK 465 SER A 85 REMARK 465 THR A 86 REMARK 465 MET A 87 REMARK 465 VAL A 88 REMARK 465 THR A 89 REMARK 465 GLY A 90 REMARK 465 ASN A 91 REMARK 465 ALA A 92 REMARK 465 THR A 93 REMARK 465 ARG A 94 REMARK 465 ASP A 95 REMARK 465 LEU A 96 REMARK 465 THR A 97 REMARK 465 LEU A 98 REMARK 465 HIS A 99 REMARK 465 GLN A 100 REMARK 465 THR A 101 REMARK 465 ALA A 102 REMARK 465 THR A 103 REMARK 465 GLN A 104 REMARK 465 HIS A 105 REMARK 465 MET A 106 REMARK 465 VAL A 107 REMARK 465 THR A 108 REMARK 465 ASN A 109 REMARK 465 ALA A 110 REMARK 465 SER A 111 REMARK 465 ALA A 112 REMARK 465 VAL A 113 REMARK 465 PRO A 114 REMARK 465 SER A 115 REMARK 465 ASP A 116 REMARK 465 CYS A 117 REMARK 465 PRO A 118 REMARK 465 SER A 119 REMARK 465 GLU A 120 REMARK 465 ASP A 121 REMARK 465 LYS A 122 REMARK 465 ASP A 123 REMARK 465 LEU A 124 REMARK 465 LEU A 125 REMARK 465 ASN A 126 REMARK 465 GLU A 127 REMARK 465 ASN A 128 REMARK 465 GLY A 235 REMARK 465 PRO A 236 REMARK 465 PRO A 237 REMARK 465 PHE A 238 REMARK 465 GLY A 239 REMARK 465 SER A 240 REMARK 465 VAL A 241 REMARK 465 LEU A 242 REMARK 465 TYR A 243 REMARK 465 GLU A 244 REMARK 465 PHE A 245 REMARK 465 VAL A 246 REMARK 465 MET A 320 REMARK 465 GLU A 321 REMARK 465 THR A 322 REMARK 465 MET A 323 REMARK 465 CYS A 324 REMARK 465 SER A 325 REMARK 465 ARG A 326 REMARK 465 LYS A 327 REMARK 465 TRP A 328 REMARK 465 GLU A 477 REMARK 465 GLU A 478 REMARK 465 LYS A 479 REMARK 465 MET A 480 REMARK 465 ALA A 481 REMARK 465 ILE A 482 REMARK 465 LEU A 483 REMARK 465 MET A 484 REMARK 465 ASP A 485 REMARK 465 HIS A 486 REMARK 465 ASN A 487 REMARK 465 CYS A 488 REMARK 465 PRO A 489 REMARK 465 ILE A 490 REMARK 465 LYS A 491 REMARK 465 THR A 492 REMARK 465 LYS A 493 REMARK 465 MET A 494 REMARK 465 TYR A 495 REMARK 465 THR A 496 REMARK 465 GLN A 497 REMARK 465 ASN A 498 REMARK 465 ASN A 499 REMARK 465 ILE A 500 REMARK 465 GLN A 501 REMARK 465 SER A 502 REMARK 465 TYR A 503 REMARK 465 PRO A 504 REMARK 465 ILE A 505 REMARK 465 GLY A 506 REMARK 465 GLU A 507 REMARK 465 ASP A 508 REMARK 465 GLU A 509 REMARK 465 GLU A 510 REMARK 465 SER A 511 REMARK 465 GLU A 512 REMARK 465 SER A 513 REMARK 465 ASP A 514 REMARK 465 PRO d 14 REMARK 465 PHE d 15 REMARK 465 MET d 16 REMARK 465 LEU d 17 REMARK 465 ARG d 18 REMARK 465 GLN d 19 REMARK 465 CYS d 20 REMARK 465 LEU d 21 REMARK 465 PRO d 22 REMARK 465 ARG d 23 REMARK 465 VAL d 24 REMARK 465 ARG d 25 REMARK 465 PRO d 26 REMARK 465 ALA d 27 REMARK 465 SER d 28 REMARK 465 ARG d 29 REMARK 465 LEU d 30 REMARK 465 PHE d 31 REMARK 465 SER d 32 REMARK 465 THR d 33 REMARK 465 ALA d 34 REMARK 465 SER d 35 REMARK 465 ILE d 36 REMARK 465 LEU d 37 REMARK 465 ARG d 38 REMARK 465 GLN d 39 REMARK 465 GLN d 40 REMARK 465 THR d 41 REMARK 465 PRO d 42 REMARK 465 LYS d 43 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO a 522 C - N - CD ANGL. DEV. = -22.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 276 75.56 51.80 REMARK 500 ARG a 6 -21.46 -142.36 REMARK 500 GLN a 48 -63.87 -96.66 REMARK 500 GLU a 122 -162.26 161.60 REMARK 500 MET a 181 48.62 -86.33 REMARK 500 THR a 263 -62.82 -97.77 REMARK 500 TRP a 290 -11.50 -142.89 REMARK 500 TRP b 19 73.51 -104.97 REMARK 500 HIS b 75 -70.74 -113.41 REMARK 500 GLN b 77 -40.03 -132.32 REMARK 500 SER b 110 76.26 52.80 REMARK 500 GLU b 137 40.46 -100.60 REMARK 500 SER b 220 -52.05 -120.13 REMARK 500 MET b 226 59.93 -97.32 REMARK 500 MET b 230 71.28 -161.27 REMARK 500 TYR c 44 -14.91 69.16 REMARK 500 ILE c 45 -56.88 -130.86 REMARK 500 THR c 117 -169.63 -76.51 REMARK 500 CYS c 122 97.94 -65.67 REMARK 500 PRO c 125 118.72 -26.13 REMARK 500 GLU c 136 -153.92 -126.16 REMARK 500 LEU c 137 -32.26 -37.90 REMARK 500 SER c 199 -176.10 -175.18 REMARK 500 ALA d 52 -12.89 -141.53 REMARK 500 LYS d 105 -163.50 -78.99 REMARK 500 THR d 126 13.04 -140.73 REMARK 500 ALA d 130 -6.28 74.97 REMARK 500 ASP d 131 30.73 -146.39 REMARK 500 SER d 132 -63.02 -92.81 REMARK 500 ASN d 134 -165.86 -78.01 REMARK 500 CYS d 148 79.31 58.65 REMARK 500 TRP d 149 -18.57 -47.57 REMARK 500 GLU e 141 70.61 50.90 REMARK 500 THR e 144 -115.03 -72.87 REMARK 500 SER e 147 115.08 -163.68 REMARK 500 GLN e 150 22.39 -140.16 REMARK 500 SER f 74 25.57 -143.39 REMARK 500 LEU f 124 55.43 -96.01 REMARK 500 PRO g 27 45.18 -83.03 REMARK 500 ASP j 13 73.25 57.87 REMARK 500 GLN j 21 31.90 -99.45 REMARK 500 HIS k 37 -4.89 70.87 REMARK 500 ASN k 78 47.72 -90.15 REMARK 500 ARG k 79 -33.15 -131.59 REMARK 500 TYR k 92 15.82 51.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE a 121 GLU a 122 133.23 REMARK 500 SER a 521 PRO a 522 106.04 REMARK 500 TRP c 124 PRO c 125 -99.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PTY a 604 REMARK 610 PTY a 605 REMARK 610 PTY c 301 REMARK 610 PTY e 201 REMARK 610 PCF k 201 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU a 601 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS a 243 ND1 REMARK 620 2 HIS a 292 NE2 107.4 REMARK 620 3 HIS a 293 NE2 100.8 100.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEA a 602 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS a 380 NE2 REMARK 620 2 HEA a 602 NA 95.3 REMARK 620 3 HEA a 602 NB 125.1 87.3 REMARK 620 4 HEA a 602 NC 105.1 157.7 88.2 REMARK 620 5 HEA a 602 ND 80.4 86.7 154.3 88.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CUA b 301 CU1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS b 219 SG REMARK 620 2 CUA b 301 CU2 131.8 REMARK 620 3 CYS b 223 SG 125.3 99.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CUA b 301 CU2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET b 230 SD REMARK 620 2 CUA b 301 CU1 135.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN d 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS d 125 SG REMARK 620 2 HIS d 133 ND1 137.5 REMARK 620 3 HIS d 133 NE2 107.1 57.9 REMARK 620 4 CYS d 148 SG 100.9 114.2 82.3 REMARK 620 5 CYS d 151 SG 103.8 91.5 147.1 102.7 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-42128 RELATED DB: EMDB REMARK 900 CRYOEM STRUCTURE OF KOMAGATAELLA PASTORIS CYTOCHROME C OXIDASE (11 REMARK 900 SUBUNITS) IN COMPLEX WITH HUMAN VMAT2 DBREF 8UCJ A 1 514 UNP Q05940 VMAT2_HUMAN 1 514 DBREF 8UCJ a 1 535 UNP F2R0K8 F2R0K8_KOMPC 1 535 DBREF 8UCJ b 14 249 PDB 8UCJ 8UCJ 14 249 DBREF 8UCJ c 1 269 UNP F2R0J6 F2R0J6_KOMPC 1 269 DBREF 8UCJ d 14 160 UNP F2QT92 F2QT92_KOMPC 14 160 DBREF 8UCJ e 26 151 UNP F2QVW8 F2QVW8_KOMPC 26 151 DBREF 8UCJ f 42 141 UNP F2QVA2 F2QVA2_KOMPC 42 141 DBREF 8UCJ g 3 60 UNP F2QS38 F2QS38_KOMPC 23 80 DBREF 8UCJ h 27 74 UNP F2QRE4 F2QRE4_KOMPC 27 74 DBREF1 8UCJ i 5 61 UNP A0A1G4KPQ9_KOMPC DBREF2 8UCJ i A0A1G4KPQ9 5 61 DBREF 8UCJ j 6 80 UNP F2QZ97 F2QZ97_KOMPC 6 80 DBREF 8UCJ k 14 120 UNP F2QT90 F2QT90_KOMPC 14 120 SEQADV 8UCJ ILE a 4 UNP F2R0K8 MET 4 CONFLICT SEQADV 8UCJ ILE a 16 UNP F2R0K8 MET 16 CONFLICT SEQADV 8UCJ ILE a 22 UNP F2R0K8 MET 22 CONFLICT SEQADV 8UCJ ILE a 33 UNP F2R0K8 MET 33 CONFLICT SEQADV 8UCJ ILE a 37 UNP F2R0K8 MET 37 CONFLICT SEQADV 8UCJ ILE a 49 UNP F2R0K8 MET 49 CONFLICT SEQADV 8UCJ ILE a 78 UNP F2R0K8 MET 78 CONFLICT SEQADV 8UCJ LEU a 85 UNP F2R0K8 THR 85 CONFLICT SEQADV 8UCJ ILE a 90 UNP F2R0K8 MET 90 CONFLICT SEQADV 8UCJ ILE a 121 UNP F2R0K8 MET 121 CONFLICT SEQADV 8UCJ ILE a 150 UNP F2R0K8 MET 150 CONFLICT SEQADV 8UCJ ILE a 158 UNP F2R0K8 MET 158 CONFLICT SEQADV 8UCJ ILE a 165 UNP F2R0K8 MET 165 CONFLICT SEQADV 8UCJ ILE a 168 UNP F2R0K8 MET 168 CONFLICT SEQADV 8UCJ ILE a 177 UNP F2R0K8 MET 177 CONFLICT SEQADV 8UCJ ILE a 232 UNP F2R0K8 MET 232 CONFLICT SEQADV 8UCJ LEU a 237 UNP F2R0K8 THR 237 CONFLICT SEQADV 8UCJ ILE a 250 UNP F2R0K8 MET 250 CONFLICT SEQADV 8UCJ ILE a 256 UNP F2R0K8 MET 256 CONFLICT SEQADV 8UCJ ILE a 260 UNP F2R0K8 MET 260 CONFLICT SEQADV 8UCJ ILE a 273 UNP F2R0K8 MET 273 CONFLICT SEQADV 8UCJ ILE a 314 UNP F2R0K8 MET 314 CONFLICT SEQADV 8UCJ ILE a 320 UNP F2R0K8 MET 320 CONFLICT SEQADV 8UCJ ILE a 322 UNP F2R0K8 MET 322 CONFLICT SEQADV 8UCJ ILE a 334 UNP F2R0K8 MET 334 CONFLICT SEQADV 8UCJ ILE a 367 UNP F2R0K8 MET 367 CONFLICT SEQADV 8UCJ LEU a 401 UNP F2R0K8 THR 401 CONFLICT SEQADV 8UCJ ILE a 402 UNP F2R0K8 MET 402 CONFLICT SEQADV 8UCJ ILE a 421 UNP F2R0K8 MET 421 CONFLICT SEQADV 8UCJ ILE a 442 UNP F2R0K8 MET 442 CONFLICT SEQADV 8UCJ ILE a 455 UNP F2R0K8 MET 455 CONFLICT SEQADV 8UCJ ILE a 462 UNP F2R0K8 MET 462 CONFLICT SEQADV 8UCJ ILE a 464 UNP F2R0K8 MET 464 CONFLICT SEQADV 8UCJ ILE a 465 UNP F2R0K8 MET 465 CONFLICT SEQADV 8UCJ ILE a 510 UNP F2R0K8 MET 510 CONFLICT SEQADV 8UCJ ILE a 515 UNP F2R0K8 MET 515 CONFLICT SEQADV 8UCJ LEU a 524 UNP F2R0K8 THR 524 CONFLICT SEQADV 8UCJ ILE c 45 UNP F2R0J6 MET 45 CONFLICT SEQADV 8UCJ ILE c 55 UNP F2R0J6 MET 55 CONFLICT SEQADV 8UCJ ILE c 62 UNP F2R0J6 MET 62 CONFLICT SEQADV 8UCJ ILE c 81 UNP F2R0J6 MET 81 CONFLICT SEQADV 8UCJ ILE c 89 UNP F2R0J6 MET 89 CONFLICT SEQADV 8UCJ ILE c 101 UNP F2R0J6 MET 101 CONFLICT SEQADV 8UCJ ILE c 120 UNP F2R0J6 MET 120 CONFLICT SEQADV 8UCJ ILE c 129 UNP F2R0J6 MET 129 CONFLICT SEQADV 8UCJ ILE c 132 UNP F2R0J6 MET 132 CONFLICT SEQADV 8UCJ ILE c 143 UNP F2R0J6 MET 143 CONFLICT SEQADV 8UCJ ILE c 247 UNP F2R0J6 MET 247 CONFLICT SEQADV 8UCJ LEU c 248 UNP F2R0J6 THR 248 CONFLICT SEQRES 1 A 514 MET ALA LEU SER GLU LEU ALA LEU VAL ARG TRP LEU GLN SEQRES 2 A 514 GLU SER ARG ARG SER ARG LYS LEU ILE LEU PHE ILE VAL SEQRES 3 A 514 PHE LEU ALA LEU LEU LEU ASP ASN MET LEU LEU THR VAL SEQRES 4 A 514 VAL VAL PRO ILE ILE PRO SER TYR LEU TYR SER ILE LYS SEQRES 5 A 514 HIS GLU LYS ASN ALA THR GLU ILE GLN THR ALA ARG PRO SEQRES 6 A 514 VAL HIS THR ALA SER ILE SER ASP SER PHE GLN SER ILE SEQRES 7 A 514 PHE SER TYR TYR ASP ASN SER THR MET VAL THR GLY ASN SEQRES 8 A 514 ALA THR ARG ASP LEU THR LEU HIS GLN THR ALA THR GLN SEQRES 9 A 514 HIS MET VAL THR ASN ALA SER ALA VAL PRO SER ASP CYS SEQRES 10 A 514 PRO SER GLU ASP LYS ASP LEU LEU ASN GLU ASN VAL GLN SEQRES 11 A 514 VAL GLY LEU LEU PHE ALA SER LYS ALA THR VAL GLN LEU SEQRES 12 A 514 ILE THR ASN PRO PHE ILE GLY LEU LEU THR ASN ARG ILE SEQRES 13 A 514 GLY TYR PRO ILE PRO ILE PHE ALA GLY PHE CYS ILE MET SEQRES 14 A 514 PHE VAL SER THR ILE MET PHE ALA PHE SER SER SER TYR SEQRES 15 A 514 ALA PHE LEU LEU ILE ALA ARG SER LEU GLN GLY ILE GLY SEQRES 16 A 514 SER SER CYS SER SER VAL ALA GLY MET GLY MET LEU ALA SEQRES 17 A 514 SER VAL TYR THR ASP ASP GLU GLU ARG GLY ASN VAL MET SEQRES 18 A 514 GLY ILE ALA LEU GLY GLY LEU ALA MET GLY VAL LEU VAL SEQRES 19 A 514 GLY PRO PRO PHE GLY SER VAL LEU TYR GLU PHE VAL GLY SEQRES 20 A 514 LYS THR ALA PRO PHE LEU VAL LEU ALA ALA LEU VAL LEU SEQRES 21 A 514 LEU ASP GLY ALA ILE GLN LEU PHE VAL LEU GLN PRO SER SEQRES 22 A 514 ARG VAL GLN PRO GLU SER GLN LYS GLY THR PRO LEU THR SEQRES 23 A 514 THR LEU LEU LYS ASP PRO TYR ILE LEU ILE ALA ALA GLY SEQRES 24 A 514 SER ILE CYS PHE ALA ASN MET GLY ILE ALA MET LEU GLU SEQRES 25 A 514 PRO ALA LEU PRO ILE TRP MET MET GLU THR MET CYS SER SEQRES 26 A 514 ARG LYS TRP GLN LEU GLY VAL ALA PHE LEU PRO ALA SER SEQRES 27 A 514 ILE SER TYR LEU ILE GLY THR ASN ILE PHE GLY ILE LEU SEQRES 28 A 514 ALA HIS LYS MET GLY ARG TRP LEU CYS ALA LEU LEU GLY SEQRES 29 A 514 MET ILE ILE VAL GLY VAL SER ILE LEU CYS ILE PRO PHE SEQRES 30 A 514 ALA LYS ASN ILE TYR GLY LEU ILE ALA PRO ASN PHE GLY SEQRES 31 A 514 VAL GLY PHE ALA ILE GLY MET VAL ASP SER SER MET MET SEQRES 32 A 514 PRO ILE MET GLY TYR LEU VAL ASP LEU ARG HIS VAL SER SEQRES 33 A 514 VAL TYR GLY SER VAL TYR ALA ILE ALA ASP VAL ALA PHE SEQRES 34 A 514 CYS MET GLY TYR ALA ILE GLY PRO SER ALA GLY GLY ALA SEQRES 35 A 514 ILE ALA LYS ALA ILE GLY PHE PRO TRP LEU MET THR ILE SEQRES 36 A 514 ILE GLY ILE ILE ASP ILE LEU PHE ALA PRO LEU CYS PHE SEQRES 37 A 514 PHE LEU ARG SER PRO PRO ALA LYS GLU GLU LYS MET ALA SEQRES 38 A 514 ILE LEU MET ASP HIS ASN CYS PRO ILE LYS THR LYS MET SEQRES 39 A 514 TYR THR GLN ASN ASN ILE GLN SER TYR PRO ILE GLY GLU SEQRES 40 A 514 ASP GLU GLU SER GLU SER ASP SEQRES 1 a 535 MET ASN TYR ILE ASN ARG TRP LEU PHE SER THR ASN ALA SEQRES 2 a 535 LYS ASP ILE ALA VAL LEU TYR PHE ILE PHE ALA LEU PHE SEQRES 3 a 535 CYS GLY LEU LEU GLY SER ILE MET SER LEU ILE LEU ARG SEQRES 4 a 535 LEU GLU LEU SER ALA PRO GLY ASN GLN ILE LEU MET GLY SEQRES 5 a 535 ASN HIS GLN LEU PHE ASN VAL VAL ALA THR ALA HIS ALA SEQRES 6 a 535 VAL LEU MET VAL PHE PHE LEU VAL MET PRO ALA ALA ILE SEQRES 7 a 535 GLY PHE PHE GLY ASN TYR LEU LEU PRO LEU MET ILE GLY SEQRES 8 a 535 ALA SER ASP MET SER PHE ALA ARG LEU ASN ASN ILE SER SEQRES 9 a 535 PHE TRP LEU LEU PRO PRO ALA LEU VAL SER LEU LEU ALA SEQRES 10 a 535 SER ALA LEU ILE GLU ASN GLY ALA GLY THR GLY TRP THR SEQRES 11 a 535 VAL TYR PRO PRO LEU ALA GLY VAL GLN SER HIS SER GLY SEQRES 12 a 535 PRO SER VAL ASP LEU ALA ILE PHE ALA LEU HIS LEU THR SEQRES 13 a 535 SER ILE SER SER LEU LEU GLY ALA ILE ASN PHE ILE THR SEQRES 14 a 535 THR THR LEU ASN MET ARG THR ILE GLY MET THR MET SER SEQRES 15 a 535 LYS LEU PRO LEU PHE VAL TRP ALA VAL VAL PHE THR SER SEQRES 16 a 535 ILE LEU LEU LEU LEU SER LEU PRO VAL LEU SER ALA GLY SEQRES 17 a 535 VAL THR LEU LEU LEU LEU ASP ARG ASN PHE ASN THR SER SEQRES 18 a 535 PHE PHE GLU PRO ALA GLY GLY GLY ASP PRO ILE LEU TYR SEQRES 19 a 535 GLN HIS LEU PHE TRP PHE PHE GLY HIS PRO GLU VAL TYR SEQRES 20 a 535 ILE LEU ILE ILE PRO GLY PHE GLY ILE ILE SER HIS ILE SEQRES 21 a 535 VAL SER THR TYR SER LYS LYS PRO VAL PHE GLY ALA ILE SEQRES 22 a 535 GLY MET VAL TYR ALA MET GLY SER ILE GLY PHE LEU GLY SEQRES 23 a 535 LEU LEU VAL TRP SER HIS HIS MET TYR THR VAL GLY LEU SEQRES 24 a 535 ASP VAL ASP SER ARG ALA TYR PHE THR SER ALA THR MET SEQRES 25 a 535 VAL ILE ALA VAL PRO THR GLY ILE LYS ILE PHE SER TRP SEQRES 26 a 535 LEU ALA THR LEU TYR GLY GLY SER ILE ARG TYR THR THR SEQRES 27 a 535 PRO MET LEU TYR ALA PHE ALA PHE LEU PHE LEU PHE THR SEQRES 28 a 535 VAL GLY GLY LEU SER GLY VAL VAL LEU SER ASN ALA SER SEQRES 29 a 535 LEU ASP ILE ALA PHE HIS ASP THR TYR TYR VAL ILE GLY SEQRES 30 a 535 HIS PHE HIS TYR VAL LEU SER LEU GLY ALA VAL PHE SER SEQRES 31 a 535 LEU PHE ALA GLY TYR TYR TYR TRP SER PRO LEU ILE THR SEQRES 32 a 535 GLY LEU TYR TYR ASN ASN ASN LEU ALA ASN ILE GLN PHE SEQRES 33 a 535 TRP LEU LEU PHE ILE GLY THR ASN VAL THR PHE PHE PRO SEQRES 34 a 535 MET HIS PHE LEU GLY LEU ASN GLY MET PRO ARG ARG ILE SEQRES 35 a 535 PRO ASP TYR PRO ASP ALA PHE ALA GLY TRP ASN ALA ILE SEQRES 36 a 535 SER SER PHE GLY SER LEU ILE SER ILE ILE SER VAL ILE SEQRES 37 a 535 LEU PHE ALA TYR VAL ILE TYR ASP GLN LEU VAL ASN GLY SEQRES 38 a 535 LEU THR ASN LYS GLN LEU SER THR ASN SER LEU PHE LYS SEQRES 39 a 535 ASN PRO ASP PHE ILE GLU SER ASN ILE ILE PHE ASN ASP SEQRES 40 a 535 ASN SER ILE LYS SER SER SER ILE ASP PHE LEU LEU THR SEQRES 41 a 535 SER PRO PRO LEU PRO HIS THR PHE ASN THR PRO ALA ILE SEQRES 42 a 535 GLN SER SEQRES 1 b 236 ASP VAL PRO THR PRO TRP GLY ILE PHE PHE GLN ASP SER SEQRES 2 b 236 ALA THR PRO ASN MET GLU GLY ILE ILE GLU LEU HIS ASN SEQRES 3 b 236 ASN ILE MET PHE TYR LEU VAL LEU ILE LEU THR PHE VAL SEQRES 4 b 236 SER TYR ILE LEU TYR THR ILE ILE TYR ASN TYR SER ASN SEQRES 5 b 236 ALA THR ILE VAL HIS LYS TYR MET ASN HIS GLY GLN LEU SEQRES 6 b 236 ILE GLU ILE VAL TRP THR THR LEU PRO ALA VAL ILE LEU SEQRES 7 b 236 LEU ILE ILE ALA PHE PRO SER PHE ILE LEU LEU TYR LEU SEQRES 8 b 236 CYS ASP GLU VAL ILE SER PRO ALA MET THR ILE LYS ALA SEQRES 9 b 236 ILE GLY LEU GLN TRP TYR TRP LYS TYR GLU TYR SER ASP SEQRES 10 b 236 PHE ILE ASN ASP ASP GLY GLU ILE VAL GLU PHE GLU SER SEQRES 11 b 236 TYR VAL ILE PRO GLU GLU LEU LEU GLU ASP GLY GLN LEU SEQRES 12 b 236 ARG LEU LEU ASP VAL ASP ALA SER VAL VAL VAL PRO VAL SEQRES 13 b 236 ASP THR HIS ILE ARG PHE ILE VAL SER SER ALA ASP VAL SEQRES 14 b 236 ILE HIS ASP PHE CYS VAL PRO ALA LEU GLY VAL LYS VAL SEQRES 15 b 236 ASP ALA SER PRO GLY ARG LEU ASN GLN THR SER ALA LEU SEQRES 16 b 236 ILE GLN ARG GLU GLY VAL TYR TYR GLY GLN CYS SER GLU SEQRES 17 b 236 LEU CYS GLY VAL MET HIS SER ALA MET PRO ILE LYS ILE SEQRES 18 b 236 GLU ALA VAL SER LEU TYR GLU PHE ILE ASN TRP LEU ASP SEQRES 19 b 236 GLU GLN SEQRES 1 c 269 MET ARG ILE GLN ASN ARG GLU ASN LEU GLN LEU PHE PRO SEQRES 2 c 269 PHE HIS LEU VAL THR ASN SER PRO TRP PRO LEU THR THR SEQRES 3 c 269 SER LEU ALA LEU MET SER LEU ALA LEU THR LEU GLY LEU SEQRES 4 c 269 THR MET HIS GLY TYR ILE GLY ASN HIS LEU TRP LEU PHE SEQRES 5 c 269 LEU ALA ILE SER LEU VAL LEU SER SER ILE PHE LEU TRP SEQRES 6 c 269 VAL ARG ASP VAL VAL ILE GLU GLY THR TYR LEU GLY ASP SEQRES 7 c 269 HIS THR ILE ALA VAL ARG LYS GLY LEU ASN ILE GLY PHE SEQRES 8 c 269 MET LEU PHE VAL LEU SER GLU ILE LEU ILE PHE ALA ALA SEQRES 9 c 269 LEU PHE TRP SER TYR PHE HIS SER ALA MET GLY PRO THR SEQRES 10 c 269 ILE GLU ILE GLY CYS GLN TRP PRO PRO VAL GLY ILE THR SEQRES 11 c 269 SER ILE LYS PRO THR GLU LEU PRO LEU LEU ASN THR ILE SEQRES 12 c 269 ILE LEU LEU ALA SER GLY ALA THR VAL THR TRP ALA HIS SEQRES 13 c 269 HIS SER ILE LEU TYR LYS ASP ARG GLN GLY THR LEU VAL SEQRES 14 c 269 GLY LEU PHE ILE THR THR LEU LEU ILE ILE LEU PHE VAL SEQRES 15 c 269 GLY CYS GLN VAL LEU GLU TYR THR TRP ALA THR PHE THR SEQRES 16 c 269 ILE ALA ASP SER VAL PHE GLY SER ILE PHE TYR ALA GLY SEQRES 17 c 269 THR GLY LEU HIS PHE ILE HIS MET VAL MET LEU ILE VAL SEQRES 18 c 269 MET LEU ALA ILE CYS TYR ALA ARG MET TYR PHE TYR HIS SEQRES 19 c 269 PHE THR SER ASN HIS HIS LEU GLY LEU GLU THR THR ILE SEQRES 20 c 269 LEU TYR LEU HIS VAL LEU ASP ILE ILE TRP LEU PHE LEU SEQRES 21 c 269 TYR ILE VAL PHE TYR TRP TRP GLY CYS SEQRES 1 d 147 PRO PHE MET LEU ARG GLN CYS LEU PRO ARG VAL ARG PRO SEQRES 2 d 147 ALA SER ARG LEU PHE SER THR ALA SER ILE LEU ARG GLN SEQRES 3 d 147 GLN THR PRO LYS GLN PHE LYS THR ALA THR SER ILE ALA SEQRES 4 d 147 GLU VAL GLU GLY LEU GLU ASN LEU VAL GLY PRO GLY ALA SEQRES 5 d 147 LYS THR GLY THR VAL PRO THR ASP LEU GLU GLN ALA THR SEQRES 6 d 147 GLY LEU GLU ARG TYR GLU LEU LEU GLY LYS LEU GLU GLY SEQRES 7 d 147 ILE GLU VAL PHE ASP GLU THR PRO LEU GLU ALA VAL ARG SEQRES 8 d 147 LYS GLY THR MET LYS ASP PRO ILE LEU ILE ASP SER TYR SEQRES 9 d 147 ASP ASP TYR ARG TYR VAL GLY CYS THR GLY VAL PRO ALA SEQRES 10 d 147 ASP SER HIS ASN ILE GLU TRP LEU LYS PRO THR THR GLU SEQRES 11 d 147 LYS ASN ALA ARG CYS TRP GLU CYS GLY SER VAL TYR LYS SEQRES 12 d 147 LEU ASN PHE LEU SEQRES 1 e 126 LEU SER ASN ALA THR VAL THR ASN LEU GLU LYS ARG TRP SEQRES 2 e 126 GLU ASP LEU PRO GLU THR ASP GLN LYS ASP ILE ILE SER SEQRES 3 e 126 GLN LEU SER GLU ARG GLN LYS LEU PRO TRP LYS ASP LEU SEQRES 4 e 126 THR LEU SER GLU LYS LYS ALA ALA TRP TYR ILE SER PHE SEQRES 5 e 126 GLY GLU TRP GLY PRO ARG ARG PRO VAL HIS THR LYS GLU SEQRES 6 e 126 ASP LYS LEU TYR ILE PHE TRP GLY THR VAL ILE GLY ILE SEQRES 7 e 126 VAL ILE SER ALA THR ILE PHE GLY ALA PHE ARG TYR ASN SEQRES 8 e 126 ARG ASN VAL PRO LYS THR MET ASN ARG GLU TRP GLN ALA SEQRES 9 e 126 ALA SER ASP GLU TYR LEU LYS SER LYS ASN ALA GLU PRO SEQRES 10 e 126 PHE THR GLY TYR SER GLN ILE GLN SER SEQRES 1 f 100 GLU GLU THR TYR GLU GLU PHE SER GLN ARG TYR GLU LYS SEQRES 2 f 100 GLU PHE ASP GLU ALA TYR ASP LEU PHE GLU VAL GLN ARG SEQRES 3 f 100 VAL LEU ASN ASN CYS PHE SER TYR ASP ILE VAL PRO SER SEQRES 4 f 100 PRO ALA VAL ILE GLY LYS ALA LEU ASN ALA CYS ARG ARG SEQRES 5 f 100 VAL ASN ASP TYR ALA THR ALA VAL ARG VAL PHE GLU GLY SEQRES 6 f 100 LEU LYS HIS LYS VAL GLU THR LYS GLU GLN TYR ASP ALA SEQRES 7 f 100 TYR LEU GLU GLU LEU LYS ASP VAL ARG GLU GLU LEU GLY SEQRES 8 f 100 ILE ASP LEU LYS GLU GLU LEU PHE PRO SEQRES 1 g 58 THR ALA THR GLU LYS ILE ILE GLU LEU GLN LYS PHE TYR SEQRES 2 g 58 GLN SER THR ASN LYS PRO ILE TYR ALA ALA HIS PRO ARG SEQRES 3 g 58 SER LYS TYR TYR LEU ILE PRO TYR PHE GLY LEU LEU GLY SEQRES 4 g 58 VAL SER VAL ALA ALA THR LEU PHE TYR THR GLY ARG ALA SEQRES 5 g 58 CYS PHE GLY ILE LYS ASP SEQRES 1 h 48 ASP VAL GLY PRO TYR SER ASN LEU PRO PHE LYS VAL LYS SEQRES 2 h 48 ASN ARG ARG VAL PRO TYR ALA VAL PRO HIS PHE LEU PHE SEQRES 3 h 48 PHE ALA ILE GLY MET GLY ILE PRO PHE PHE ALA CYS TYR SEQRES 4 h 48 VAL GLN LEU LYS ARG SER GLY SER ILE SEQRES 1 i 57 SER LEU THR ARG ILE GLN GLY SER VAL LYS ARG ARG ILE SEQRES 2 i 57 LEU THR ASP ILE SER VAL GLY LEU THR LEU GLY PHE GLY SEQRES 3 i 57 PHE ALA SER TYR TRP TRP TRP GLY VAL HIS LYS PRO THR SEQRES 4 i 57 VAL ALA HIS ARG GLU ASN TYR TYR ILE GLU LEU ALA LYS SEQRES 5 i 57 LYS LYS LYS ALA GLU SEQRES 1 j 75 GLU LEU LYS THR VAL GLY PHE ASP ALA ARG PHE PRO GLN SEQRES 2 j 75 GLN ASN GLN THR LYS HIS CYS TYR GLN SER TYR LEU ASP SEQRES 3 j 75 TYR HIS LYS CYS ILE THR VAL LYS GLY GLU ASP PHE ALA SEQRES 4 j 75 PRO CYS LYS VAL PHE TRP LYS THR TYR ASN SER LEU CYS SEQRES 5 j 75 PRO SER ALA TRP VAL GLU GLU TRP ASP GLU GLN ARG GLU SEQRES 6 j 75 LYS GLY ILE PHE PRO GLY ASN LEU LYS VAL SEQRES 1 k 107 PHE THR THR VAL LYS GLY ASP PRO ALA LYS ALA GLN ALA SEQRES 2 k 107 PHE LYS LYS HIS LEU ASP ASP VAL TYR HIS HIS SER LYS SEQRES 3 k 107 GLY THR THR ALA LEU TRP LYS LYS ILE SER TYR PHE VAL SEQRES 4 k 107 ALA LEU PRO ALA ILE ALA LEU THR ALA VAL ASN THR TYR SEQRES 5 k 107 PHE VAL GLU ALA GLU HIS ALA GLU HIS ARG ALA HIS ASN SEQRES 6 k 107 ARG HIS LEU SER ASP GLU GLU TRP PRO LYS ALA TYR PRO SEQRES 7 k 107 TYR GLN ASN VAL ARG ARG VAL ASP PHE PHE TRP GLY ASP SEQRES 8 k 107 GLY ASP LYS THR LEU PHE TRP ASN PRO ASP VAL ASN ARG SEQRES 9 k 107 HIS VAL LYS HET CU a 601 1 HET HEA a 602 60 HET HEA a 603 60 HET PTY a 604 34 HET PTY a 605 40 HET CUA b 301 2 HET PTY c 301 40 HET ZN d 201 1 HET PTY e 201 33 HET PCF k 201 43 HETNAM CU COPPER (II) ION HETNAM HEA HEME-A HETNAM PTY PHOSPHATIDYLETHANOLAMINE HETNAM CUA DINUCLEAR COPPER ION HETNAM ZN ZINC ION HETNAM PCF 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE FORMUL 13 CU CU 2+ FORMUL 14 HEA 2(C49 H56 FE N4 O6) FORMUL 16 PTY 4(C40 H80 N O8 P) FORMUL 18 CUA CU2 FORMUL 20 ZN ZN 2+ FORMUL 22 PCF C40 H80 N O8 P HELIX 1 AA1 ARG A 19 VAL A 39 1 21 HELIX 2 AA2 GLN A 130 ALA A 136 1 7 HELIX 3 AA3 ALA A 136 GLY A 157 1 22 HELIX 4 AA4 TYR A 158 PHE A 178 1 21 HELIX 5 AA5 SER A 181 TYR A 211 1 31 HELIX 6 AA6 ASP A 213 LEU A 225 1 13 HELIX 7 AA7 GLY A 226 VAL A 234 1 9 HELIX 8 AA8 THR A 249 VAL A 269 1 21 HELIX 9 AA9 PRO A 284 ASP A 291 1 8 HELIX 10 AB1 ASP A 291 MET A 319 1 29 HELIX 11 AB2 LEU A 330 GLY A 349 1 20 HELIX 12 AB3 LEU A 351 GLY A 356 1 6 HELIX 13 AB4 GLY A 356 ALA A 378 1 23 HELIX 14 AB5 ILE A 381 GLY A 383 5 3 HELIX 15 AB6 LEU A 384 HIS A 414 1 31 HELIX 16 AB7 TYR A 418 ILE A 447 1 30 HELIX 17 AB8 GLY A 448 ALA A 464 1 17 HELIX 18 AB9 PRO A 465 ARG A 471 5 7 HELIX 19 AC1 TYR a 3 LEU a 8 1 6 HELIX 20 AC2 ALA a 13 LEU a 42 1 30 HELIX 21 AC3 PHE a 57 PHE a 70 1 14 HELIX 22 AC4 LEU a 72 GLY a 79 1 8 HELIX 23 AC5 PHE a 81 GLY a 91 1 11 HELIX 24 AC6 PHE a 97 LEU a 107 1 11 HELIX 25 AC7 LEU a 108 ALA a 117 1 10 HELIX 26 AC8 SER a 145 ILE a 150 1 6 HELIX 27 AC9 PHE a 151 MET a 174 1 24 HELIX 28 AD1 PRO a 185 PHE a 218 1 34 HELIX 29 AD2 PRO a 231 LEU a 249 1 19 HELIX 30 AD3 ILE a 250 SER a 265 1 16 HELIX 31 AD4 GLY a 271 LEU a 285 1 15 HELIX 32 AD5 TRP a 290 MET a 294 5 5 HELIX 33 AD6 ASP a 300 VAL a 313 1 14 HELIX 34 AD7 ILE a 314 GLY a 332 1 19 HELIX 35 AD8 THR a 337 ASN a 362 1 26 HELIX 36 AD9 LEU a 365 HIS a 370 1 6 HELIX 37 AE1 THR a 372 SER a 384 1 13 HELIX 38 AE2 GLY a 386 GLY a 404 1 19 HELIX 39 AE3 ASN a 408 PHE a 428 1 21 HELIX 40 AE4 PHE a 428 GLY a 437 1 10 HELIX 41 AE5 PRO a 446 ALA a 448 5 3 HELIX 42 AE6 PHE a 449 SER a 456 1 8 HELIX 43 AE7 PHE a 458 VAL a 479 1 22 HELIX 44 AE8 ASN a 480 ASN a 484 5 5 HELIX 45 AE9 SER a 488 LEU a 492 5 5 HELIX 46 AF1 SER a 501 ASN a 508 1 8 HELIX 47 AF2 ILE a 515 LEU a 519 5 5 HELIX 48 AF3 THR b 28 TYR b 63 1 36 HELIX 49 AF4 LEU b 78 CYS b 105 1 28 HELIX 50 AF5 SER b 238 ASP b 247 1 10 HELIX 51 AF6 PRO c 21 MET c 41 1 21 HELIX 52 AF7 TRP c 50 TYR c 75 1 26 HELIX 53 AF8 THR c 80 MET c 114 1 35 HELIX 54 AF9 GLU c 136 HIS c 157 1 22 HELIX 55 AG1 THR c 167 GLU c 188 1 22 HELIX 56 AG2 VAL c 200 THR c 209 1 10 HELIX 57 AG3 GLY c 210 PHE c 232 1 23 HELIX 58 AG4 LEU c 241 LEU c 258 1 18 HELIX 59 AG5 GLY d 56 LEU d 60 5 5 HELIX 60 AG6 GLY d 79 LEU d 89 1 11 HELIX 61 AG7 SER e 27 THR e 32 1 6 HELIX 62 AG8 GLN e 46 SER e 54 1 9 HELIX 63 AG9 THR e 65 PHE e 77 1 13 HELIX 64 AH1 TRP e 80 ARG e 84 5 5 HELIX 65 AH2 THR e 88 ASN e 116 1 29 HELIX 66 AH3 ASN e 124 ALA e 129 1 6 HELIX 67 AH4 ALA e 129 LYS e 138 1 10 HELIX 68 AH5 THR f 44 ASP f 57 1 14 HELIX 69 AH6 ASP f 61 PHE f 73 1 13 HELIX 70 AH7 SER f 80 VAL f 94 1 15 HELIX 71 AH8 TYR f 97 VAL f 111 1 15 HELIX 72 AH9 LYS f 114 GLU f 122 1 9 HELIX 73 AI1 VAL f 127 GLY f 132 1 6 HELIX 74 AI2 LEU f 135 PHE f 140 1 6 HELIX 75 AI3 LYS g 7 GLN g 12 1 6 HELIX 76 AI4 PRO g 21 ALA g 25 5 5 HELIX 77 AI5 ARG g 28 THR g 47 1 20 HELIX 78 AI6 TYR h 45 MET h 57 1 13 HELIX 79 AI7 GLY h 58 ARG h 70 1 13 HELIX 80 AI8 SER i 12 LEU i 25 1 14 HELIX 81 AI9 LEU i 25 PHE i 31 1 7 HELIX 82 AJ1 HIS i 40 GLU i 61 1 22 HELIX 83 AJ2 GLN j 21 VAL j 38 1 18 HELIX 84 AJ3 PHE j 43 CYS j 46 5 4 HELIX 85 AJ4 LYS j 47 ASN j 54 1 8 HELIX 86 AJ5 PRO j 58 LYS j 71 1 14 HELIX 87 AJ6 LYS k 23 LEU k 31 1 9 HELIX 88 AJ7 LYS k 39 PHE k 51 1 13 HELIX 89 AJ8 ALA k 53 HIS k 71 1 19 SHEET 1 AA1 3 ILE a 533 GLN a 534 0 SHEET 2 AA1 3 VAL d 123 CYS d 125 1 O GLY d 124 N ILE a 533 SHEET 3 AA1 3 GLU d 136 LEU d 138 -1 O GLU d 136 N CYS d 125 SHEET 1 AA2 5 GLU b 140 SER b 143 0 SHEET 2 AA2 5 TRP b 124 TYR b 128 -1 N TYR b 126 O PHE b 141 SHEET 3 AA2 5 THR b 114 GLY b 119 -1 N LYS b 116 O GLU b 127 SHEET 4 AA2 5 ILE b 173 SER b 179 1 O ARG b 174 N ILE b 115 SHEET 5 AA2 5 ASN b 203 ALA b 207 -1 O ASN b 203 N VAL b 177 SHEET 1 AA3 3 VAL b 165 PRO b 168 0 SHEET 2 AA3 3 PRO b 231 VAL b 237 1 O GLU b 235 N VAL b 167 SHEET 3 AA3 3 VAL b 214 GLN b 218 -1 N TYR b 215 O ILE b 234 SHEET 1 AA4 2 HIS b 184 VAL b 188 0 SHEET 2 AA4 2 VAL b 193 ALA b 197 -1 O ALA b 197 N HIS b 184 SHEET 1 AA5 2 ILE d 112 SER d 116 0 SHEET 2 AA5 2 TYR d 155 PHE d 159 1 O LYS d 156 N ILE d 114 SSBOND 1 CYS j 25 CYS j 57 1555 1555 2.02 SSBOND 2 CYS j 35 CYS j 46 1555 1555 2.04 LINK ND1 HIS a 243 CU CU a 601 1555 1555 2.14 LINK NE2 HIS a 292 CU CU a 601 1555 1555 2.13 LINK NE2 HIS a 293 CU CU a 601 1555 1555 2.11 LINK NE2 HIS a 380 FE HEA a 602 1555 1555 2.76 LINK SG CYS b 219 CU1 CUA b 301 1555 1555 2.30 LINK SG CYS b 223 CU1 CUA b 301 1555 1555 2.33 LINK SD MET b 230 CU2 CUA b 301 1555 1555 2.64 LINK SG CYS d 125 ZN ZN d 201 1555 1555 2.33 LINK ND1 HIS d 133 ZN ZN d 201 1555 1555 2.26 LINK NE2 HIS d 133 ZN ZN d 201 1555 1555 2.16 LINK SG CYS d 148 ZN ZN d 201 1555 1555 2.32 LINK SG CYS d 151 ZN ZN d 201 1555 1555 2.30 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000