HEADER TRANSFERASE/INHIBITOR 29-SEP-23 8UDT TITLE THE X-RAY CO-CRYSTAL STRUCTURE OF HUMAN FGFR3 AND KIN-3248 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBROBLAST GROWTH FACTOR RECEPTOR 3; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: KINASE DOMAIN; COMPND 5 SYNONYM: FGFR-3; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FGFR3, JTK4; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF21 KEYWDS FGFR INHIBITOR, COVALENT DRUG, KIN-3248, ALTERATION, MUTATION, KEYWDS 2 STRUCTURE-BASED DRUG DESIGN, KINASE INHIBITOR, SIGNALING, KEYWDS 3 PROLIFERATION, TRANSFERASE, TRANSFERASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.S.TYHONAS,L.D.ARNOLD,J.COX,A.FRANOVIC,E.GARDINER,K.GRANDINETTI, AUTHOR 2 R.KANIA,T.KANOUNI,M.LARDY,C.LI,E.S.MARTIN,N.MILLER,A.MOHAN, AUTHOR 3 E.A.MURPHY,M.PEREZ,L.SOROCEANU,N.TIMPLE,S.URYU,S.WOMBLE,S.W.KALDOR REVDAT 2 21-FEB-24 8UDT 1 JRNL REVDAT 1 07-FEB-24 8UDT 0 JRNL AUTH J.S.TYHONAS,L.D.ARNOLD,J.M.COX,A.FRANOVIC,E.GARDINER, JRNL AUTH 2 K.GRANDINETTI,R.KANIA,T.KANOUNI,M.LARDY,C.LI,E.S.MARTIN, JRNL AUTH 3 N.MILLER,A.MOHAN,E.A.MURPHY,M.PEREZ,L.SOROCEANU,N.TIMPLE, JRNL AUTH 4 S.URYU,S.WOMBLE,S.W.KALDOR JRNL TITL DISCOVERY OF KIN-3248, AN IRREVERSIBLE, NEXT GENERATION FGFR JRNL TITL 2 INHIBITOR FOR THE TREATMENT OF ADVANCED TUMORS HARBORING JRNL TITL 3 FGFR2 AND/OR FGFR3 GENE ALTERATIONS. JRNL REF J.MED.CHEM. V. 67 1734 2024 JRNL REFN ISSN 0022-2623 JRNL PMID 38267212 JRNL DOI 10.1021/ACS.JMEDCHEM.3C01819 REMARK 2 REMARK 2 RESOLUTION. 2.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.8 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 31351 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.263 REMARK 3 R VALUE (WORKING SET) : 0.262 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1548 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.83 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.85 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3218 REMARK 3 BIN FREE R VALUE : 0.3846 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 25 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6769 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 132 REMARK 3 SOLVENT ATOMS : 120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 99.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 107.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 16.80810 REMARK 3 B22 (A**2) : -22.02420 REMARK 3 B33 (A**2) : 5.21610 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.490 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 1.065 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.359 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.913 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 13887 ; 6.000 ; HARMONIC REMARK 3 BOND ANGLES : 25148 ; 5.000 ; HARMONIC REMARK 3 TORSION ANGLES : 4182 ; 10.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 2142 ; 8.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 7054 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 874 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : 1 ; 1.000 ; HARMONIC REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 11341 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 0.75 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.17 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.48 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|457 - A|756 } REMARK 3 ORIGIN FOR THE GROUP (A): 27.8695 23.8767 -6.4266 REMARK 3 T TENSOR REMARK 3 T11: -0.1583 T22: -0.0869 REMARK 3 T33: -0.1918 T12: 0.0197 REMARK 3 T13: -0.0189 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 3.4362 L22: 0 REMARK 3 L33: 3.3434 L12: 0.9396 REMARK 3 L13: -2.061 L23: -0.6448 REMARK 3 S TENSOR REMARK 3 S11: 0.0331 S12: -0.0349 S13: -0.26 REMARK 3 S21: -0.0349 S22: 0.0506 S23: -0.473 REMARK 3 S31: -0.26 S32: -0.473 S33: -0.0837 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|458 - B|754 } REMARK 3 ORIGIN FOR THE GROUP (A): 45.2023 31.8906 53.1440 REMARK 3 T TENSOR REMARK 3 T11: -0.1869 T22: 0.0385 REMARK 3 T33: -0.2108 T12: 0.0263 REMARK 3 T13: -0.0175 T23: -0.0745 REMARK 3 L TENSOR REMARK 3 L11: 3.1277 L22: 0.873 REMARK 3 L33: 3.4154 L12: 2.9104 REMARK 3 L13: -0.8735 L23: -0.3203 REMARK 3 S TENSOR REMARK 3 S11: 0.2317 S12: 0.0992 S13: -0.2129 REMARK 3 S21: 0.0992 S22: -0.1891 S23: -0.4561 REMARK 3 S31: -0.2129 S32: -0.4561 S33: -0.0426 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|458 - C|758 } REMARK 3 ORIGIN FOR THE GROUP (A): 20.5751 8.0090 41.3379 REMARK 3 T TENSOR REMARK 3 T11: -0.194 T22: -0.1117 REMARK 3 T33: -0.1591 T12: -0.152 REMARK 3 T13: 0.0611 T23: -0.0526 REMARK 3 L TENSOR REMARK 3 L11: 2.2523 L22: 2.0463 REMARK 3 L33: 3.8939 L12: 2.9104 REMARK 3 L13: -1.2619 L23: -2.6082 REMARK 3 S TENSOR REMARK 3 S11: 0.241 S12: -0.2074 S13: 0.0896 REMARK 3 S21: -0.2074 S22: -0.2125 S23: -0.5442 REMARK 3 S31: 0.0896 S32: -0.5442 S33: -0.0284 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8UDT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1000277867. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC 1.1.7 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31351 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.830 REMARK 200 RESOLUTION RANGE LOW (A) : 33.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 28.10 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 29.20 REMARK 200 R MERGE FOR SHELL (I) : 1.75000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.20 M DL-MALIC ACID PH 5.00, 18.00 % REMARK 280 (W/V) PEG 4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.99000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 80.22000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 89.58150 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.99000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 80.22000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 89.58150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.99000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 80.22000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 89.58150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.99000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 80.22000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 89.58150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 454 REMARK 465 SER A 455 REMARK 465 GLU A 456 REMARK 465 THR A 652 REMARK 465 ASN A 653 REMARK 465 GLY A 654 REMARK 465 ARG A 655 REMARK 465 HIS A 757 REMARK 465 HIS A 758 REMARK 465 HIS A 759 REMARK 465 HIS A 760 REMARK 465 HIS A 761 REMARK 465 HIS A 762 REMARK 465 MET B 454 REMARK 465 SER B 455 REMARK 465 GLU B 456 REMARK 465 THR B 652 REMARK 465 ASN B 653 REMARK 465 GLY B 654 REMARK 465 THR B 755 REMARK 465 SER B 756 REMARK 465 HIS B 757 REMARK 465 HIS B 758 REMARK 465 HIS B 759 REMARK 465 HIS B 760 REMARK 465 HIS B 761 REMARK 465 HIS B 762 REMARK 465 MET C 454 REMARK 465 SER C 455 REMARK 465 GLU C 456 REMARK 465 THR C 651 REMARK 465 THR C 652 REMARK 465 ASN C 653 REMARK 465 GLY C 654 REMARK 465 HIS C 759 REMARK 465 HIS C 760 REMARK 465 HIS C 761 REMARK 465 HIS C 762 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE1 TRP C 660 OE2 GLU C 686 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 616 -9.41 75.89 REMARK 500 ASP A 617 59.37 -152.12 REMARK 500 LYS A 649 -0.19 66.97 REMARK 500 ARG B 616 -8.80 74.91 REMARK 500 ASP B 617 60.46 -153.53 REMARK 500 ARG C 616 -4.30 75.11 REMARK 500 ASP C 617 60.87 -154.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2130 DISTANCE = 6.01 ANGSTROMS DBREF 8UDT A 455 756 UNP P22607 FGFR3_HUMAN 455 756 DBREF 8UDT B 455 756 UNP P22607 FGFR3_HUMAN 455 756 DBREF 8UDT C 455 756 UNP P22607 FGFR3_HUMAN 455 756 SEQADV 8UDT MET A 454 UNP P22607 INITIATING METHIONINE SEQADV 8UDT A UNP P22607 PRO 572 DELETION SEQADV 8UDT A UNP P22607 PRO 573 DELETION SEQADV 8UDT A UNP P22607 GLY 574 DELETION SEQADV 8UDT A UNP P22607 LEU 575 DELETION SEQADV 8UDT A UNP P22607 ASP 576 DELETION SEQADV 8UDT A UNP P22607 TYR 577 DELETION SEQADV 8UDT A UNP P22607 SER 578 DELETION SEQADV 8UDT A UNP P22607 PHE 579 DELETION SEQADV 8UDT A UNP P22607 ASP 580 DELETION SEQADV 8UDT A UNP P22607 THR 581 DELETION SEQADV 8UDT A UNP P22607 CYS 582 DELETION SEQADV 8UDT A UNP P22607 LYS 583 DELETION SEQADV 8UDT SER A 572 UNP P22607 PRO 584 ENGINEERED MUTATION SEQADV 8UDT GLY A 573 UNP P22607 PRO 585 ENGINEERED MUTATION SEQADV 8UDT HIS A 757 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS A 758 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS A 759 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS A 760 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS A 761 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS A 762 UNP P22607 EXPRESSION TAG SEQADV 8UDT MET B 454 UNP P22607 INITIATING METHIONINE SEQADV 8UDT B UNP P22607 PRO 572 DELETION SEQADV 8UDT B UNP P22607 PRO 573 DELETION SEQADV 8UDT B UNP P22607 GLY 574 DELETION SEQADV 8UDT B UNP P22607 LEU 575 DELETION SEQADV 8UDT B UNP P22607 ASP 576 DELETION SEQADV 8UDT B UNP P22607 TYR 577 DELETION SEQADV 8UDT B UNP P22607 SER 578 DELETION SEQADV 8UDT B UNP P22607 PHE 579 DELETION SEQADV 8UDT B UNP P22607 ASP 580 DELETION SEQADV 8UDT B UNP P22607 THR 581 DELETION SEQADV 8UDT B UNP P22607 CYS 582 DELETION SEQADV 8UDT B UNP P22607 LYS 583 DELETION SEQADV 8UDT SER B 572 UNP P22607 PRO 584 ENGINEERED MUTATION SEQADV 8UDT GLY B 573 UNP P22607 PRO 585 ENGINEERED MUTATION SEQADV 8UDT HIS B 757 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS B 758 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS B 759 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS B 760 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS B 761 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS B 762 UNP P22607 EXPRESSION TAG SEQADV 8UDT MET C 454 UNP P22607 INITIATING METHIONINE SEQADV 8UDT C UNP P22607 PRO 572 DELETION SEQADV 8UDT C UNP P22607 PRO 573 DELETION SEQADV 8UDT C UNP P22607 GLY 574 DELETION SEQADV 8UDT C UNP P22607 LEU 575 DELETION SEQADV 8UDT C UNP P22607 ASP 576 DELETION SEQADV 8UDT C UNP P22607 TYR 577 DELETION SEQADV 8UDT C UNP P22607 SER 578 DELETION SEQADV 8UDT C UNP P22607 PHE 579 DELETION SEQADV 8UDT C UNP P22607 ASP 580 DELETION SEQADV 8UDT C UNP P22607 THR 581 DELETION SEQADV 8UDT C UNP P22607 CYS 582 DELETION SEQADV 8UDT C UNP P22607 LYS 583 DELETION SEQADV 8UDT SER C 572 UNP P22607 PRO 584 ENGINEERED MUTATION SEQADV 8UDT GLY C 573 UNP P22607 PRO 585 ENGINEERED MUTATION SEQADV 8UDT HIS C 757 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS C 758 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS C 759 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS C 760 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS C 761 UNP P22607 EXPRESSION TAG SEQADV 8UDT HIS C 762 UNP P22607 EXPRESSION TAG SEQRES 1 A 297 MET SER GLU LEU GLU LEU PRO ALA ASP PRO LYS TRP GLU SEQRES 2 A 297 LEU SER ARG ALA ARG LEU THR LEU GLY LYS PRO LEU GLY SEQRES 3 A 297 GLU GLY CYS PHE GLY GLN VAL VAL MET ALA GLU ALA ILE SEQRES 4 A 297 GLY ILE ASP LYS ASP ARG ALA ALA LYS PRO VAL THR VAL SEQRES 5 A 297 ALA VAL LYS MET LEU LYS ASP ASP ALA THR ASP LYS ASP SEQRES 6 A 297 LEU SER ASP LEU VAL SER GLU MET GLU MET MET LYS MET SEQRES 7 A 297 ILE GLY LYS HIS LYS ASN ILE ILE ASN LEU LEU GLY ALA SEQRES 8 A 297 CYS THR GLN GLY GLY PRO LEU TYR VAL LEU VAL GLU TYR SEQRES 9 A 297 ALA ALA LYS GLY ASN LEU ARG GLU PHE LEU ARG ALA ARG SEQRES 10 A 297 ARG SER GLY GLU GLU GLN LEU THR PHE LYS ASP LEU VAL SEQRES 11 A 297 SER CYS ALA TYR GLN VAL ALA ARG GLY MET GLU TYR LEU SEQRES 12 A 297 ALA SER GLN LYS CYS ILE HIS ARG ASP LEU ALA ALA ARG SEQRES 13 A 297 ASN VAL LEU VAL THR GLU ASP ASN VAL MET LYS ILE ALA SEQRES 14 A 297 ASP PHE GLY LEU ALA ARG ASP VAL HIS ASN LEU ASP TYR SEQRES 15 A 297 TYR LYS LYS THR THR ASN GLY ARG LEU PRO VAL LYS TRP SEQRES 16 A 297 MET ALA PRO GLU ALA LEU PHE ASP ARG VAL TYR THR HIS SEQRES 17 A 297 GLN SER ASP VAL TRP SER PHE GLY VAL LEU LEU TRP GLU SEQRES 18 A 297 ILE PHE THR LEU GLY GLY SER PRO TYR PRO GLY ILE PRO SEQRES 19 A 297 VAL GLU GLU LEU PHE LYS LEU LEU LYS GLU GLY HIS ARG SEQRES 20 A 297 MET ASP LYS PRO ALA ASN CYS THR HIS ASP LEU TYR MET SEQRES 21 A 297 ILE MET ARG GLU CYS TRP HIS ALA ALA PRO SER GLN ARG SEQRES 22 A 297 PRO THR PHE LYS GLN LEU VAL GLU ASP LEU ASP ARG VAL SEQRES 23 A 297 LEU THR VAL THR SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 297 MET SER GLU LEU GLU LEU PRO ALA ASP PRO LYS TRP GLU SEQRES 2 B 297 LEU SER ARG ALA ARG LEU THR LEU GLY LYS PRO LEU GLY SEQRES 3 B 297 GLU GLY CYS PHE GLY GLN VAL VAL MET ALA GLU ALA ILE SEQRES 4 B 297 GLY ILE ASP LYS ASP ARG ALA ALA LYS PRO VAL THR VAL SEQRES 5 B 297 ALA VAL LYS MET LEU LYS ASP ASP ALA THR ASP LYS ASP SEQRES 6 B 297 LEU SER ASP LEU VAL SER GLU MET GLU MET MET LYS MET SEQRES 7 B 297 ILE GLY LYS HIS LYS ASN ILE ILE ASN LEU LEU GLY ALA SEQRES 8 B 297 CYS THR GLN GLY GLY PRO LEU TYR VAL LEU VAL GLU TYR SEQRES 9 B 297 ALA ALA LYS GLY ASN LEU ARG GLU PHE LEU ARG ALA ARG SEQRES 10 B 297 ARG SER GLY GLU GLU GLN LEU THR PHE LYS ASP LEU VAL SEQRES 11 B 297 SER CYS ALA TYR GLN VAL ALA ARG GLY MET GLU TYR LEU SEQRES 12 B 297 ALA SER GLN LYS CYS ILE HIS ARG ASP LEU ALA ALA ARG SEQRES 13 B 297 ASN VAL LEU VAL THR GLU ASP ASN VAL MET LYS ILE ALA SEQRES 14 B 297 ASP PHE GLY LEU ALA ARG ASP VAL HIS ASN LEU ASP TYR SEQRES 15 B 297 TYR LYS LYS THR THR ASN GLY ARG LEU PRO VAL LYS TRP SEQRES 16 B 297 MET ALA PRO GLU ALA LEU PHE ASP ARG VAL TYR THR HIS SEQRES 17 B 297 GLN SER ASP VAL TRP SER PHE GLY VAL LEU LEU TRP GLU SEQRES 18 B 297 ILE PHE THR LEU GLY GLY SER PRO TYR PRO GLY ILE PRO SEQRES 19 B 297 VAL GLU GLU LEU PHE LYS LEU LEU LYS GLU GLY HIS ARG SEQRES 20 B 297 MET ASP LYS PRO ALA ASN CYS THR HIS ASP LEU TYR MET SEQRES 21 B 297 ILE MET ARG GLU CYS TRP HIS ALA ALA PRO SER GLN ARG SEQRES 22 B 297 PRO THR PHE LYS GLN LEU VAL GLU ASP LEU ASP ARG VAL SEQRES 23 B 297 LEU THR VAL THR SER HIS HIS HIS HIS HIS HIS SEQRES 1 C 297 MET SER GLU LEU GLU LEU PRO ALA ASP PRO LYS TRP GLU SEQRES 2 C 297 LEU SER ARG ALA ARG LEU THR LEU GLY LYS PRO LEU GLY SEQRES 3 C 297 GLU GLY CYS PHE GLY GLN VAL VAL MET ALA GLU ALA ILE SEQRES 4 C 297 GLY ILE ASP LYS ASP ARG ALA ALA LYS PRO VAL THR VAL SEQRES 5 C 297 ALA VAL LYS MET LEU LYS ASP ASP ALA THR ASP LYS ASP SEQRES 6 C 297 LEU SER ASP LEU VAL SER GLU MET GLU MET MET LYS MET SEQRES 7 C 297 ILE GLY LYS HIS LYS ASN ILE ILE ASN LEU LEU GLY ALA SEQRES 8 C 297 CYS THR GLN GLY GLY PRO LEU TYR VAL LEU VAL GLU TYR SEQRES 9 C 297 ALA ALA LYS GLY ASN LEU ARG GLU PHE LEU ARG ALA ARG SEQRES 10 C 297 ARG SER GLY GLU GLU GLN LEU THR PHE LYS ASP LEU VAL SEQRES 11 C 297 SER CYS ALA TYR GLN VAL ALA ARG GLY MET GLU TYR LEU SEQRES 12 C 297 ALA SER GLN LYS CYS ILE HIS ARG ASP LEU ALA ALA ARG SEQRES 13 C 297 ASN VAL LEU VAL THR GLU ASP ASN VAL MET LYS ILE ALA SEQRES 14 C 297 ASP PHE GLY LEU ALA ARG ASP VAL HIS ASN LEU ASP TYR SEQRES 15 C 297 TYR LYS LYS THR THR ASN GLY ARG LEU PRO VAL LYS TRP SEQRES 16 C 297 MET ALA PRO GLU ALA LEU PHE ASP ARG VAL TYR THR HIS SEQRES 17 C 297 GLN SER ASP VAL TRP SER PHE GLY VAL LEU LEU TRP GLU SEQRES 18 C 297 ILE PHE THR LEU GLY GLY SER PRO TYR PRO GLY ILE PRO SEQRES 19 C 297 VAL GLU GLU LEU PHE LYS LEU LEU LYS GLU GLY HIS ARG SEQRES 20 C 297 MET ASP LYS PRO ALA ASN CYS THR HIS ASP LEU TYR MET SEQRES 21 C 297 ILE MET ARG GLU CYS TRP HIS ALA ALA PRO SER GLN ARG SEQRES 22 C 297 PRO THR PHE LYS GLN LEU VAL GLU ASP LEU ASP ARG VAL SEQRES 23 C 297 LEU THR VAL THR SER HIS HIS HIS HIS HIS HIS HET MLT A1001 9 HET MLT A1002 9 HET WGF A1003 38 HET WGF B2001 38 HET WGF C2001 38 HETNAM MLT D-MALATE HETNAM WGF 3-[(1-CYCLOPROPYL-4,6-DIFLUORO-1H-BENZIMIDAZOL-5-YL) HETNAM 2 WGF ETHYNYL]-1-[(3R,5R)-5-(METHOXYMETHYL)-1- HETNAM 3 WGF PROPANOYLPYRROLIDIN-3-YL]-5-(METHYLAMINO)-1H-PYRAZOLE- HETNAM 4 WGF 4-CARBOXAMIDE HETSYN MLT (2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID HETSYN WGF KIN-3248 FORMUL 4 MLT 2(C4 H6 O5) FORMUL 6 WGF 3(C26 H29 F2 N7 O3) FORMUL 9 HOH *120(H2 O) HELIX 1 AA1 SER A 468 ALA A 470 5 3 HELIX 2 AA2 THR A 515 GLY A 533 1 19 HELIX 3 AA3 ASN A 562 ARG A 570 1 9 HELIX 4 AA4 THR A 590 GLN A 611 1 22 HELIX 5 AA5 ALA A 619 ARG A 621 5 3 HELIX 6 AA6 LEU A 656 TRP A 660 5 5 HELIX 7 AA7 ALA A 662 ARG A 669 1 8 HELIX 8 AA8 THR A 672 THR A 689 1 18 HELIX 9 AA9 PRO A 699 GLY A 710 1 12 HELIX 10 AB1 THR A 720 TRP A 731 1 12 HELIX 11 AB2 ALA A 734 ARG A 738 5 5 HELIX 12 AB3 THR A 740 THR A 755 1 16 HELIX 13 AB4 SER B 468 ALA B 470 5 3 HELIX 14 AB5 THR B 515 GLY B 533 1 19 HELIX 15 AB6 ASN B 562 ARG B 570 1 9 HELIX 16 AB7 THR B 590 GLN B 611 1 22 HELIX 17 AB8 ALA B 619 ARG B 621 5 3 HELIX 18 AB9 ARG B 655 MET B 661 5 7 HELIX 19 AC1 ALA B 662 ARG B 669 1 8 HELIX 20 AC2 THR B 672 THR B 689 1 18 HELIX 21 AC3 PRO B 699 GLY B 710 1 12 HELIX 22 AC4 THR B 720 TRP B 731 1 12 HELIX 23 AC5 ALA B 734 ARG B 738 5 5 HELIX 24 AC6 THR B 740 VAL B 754 1 15 HELIX 25 AC7 SER C 468 ALA C 470 5 3 HELIX 26 AC8 THR C 515 GLY C 533 1 19 HELIX 27 AC9 ASN C 562 ARG C 570 1 9 HELIX 28 AD1 THR C 590 GLN C 611 1 22 HELIX 29 AD2 ALA C 619 ARG C 621 5 3 HELIX 30 AD3 LEU C 656 MET C 661 5 6 HELIX 31 AD4 ALA C 662 ARG C 669 1 8 HELIX 32 AD5 THR C 672 THR C 689 1 18 HELIX 33 AD6 PRO C 699 GLU C 709 1 11 HELIX 34 AD7 THR C 720 TRP C 731 1 12 HELIX 35 AD8 ALA C 734 ARG C 738 5 5 HELIX 36 AD9 THR C 740 SER C 756 1 17 SHEET 1 AA1 5 LEU A 472 PRO A 477 0 SHEET 2 AA1 5 VAL A 486 ILE A 492 -1 O MET A 488 N GLY A 475 SHEET 3 AA1 5 PRO A 502 MET A 509 -1 O VAL A 507 N VAL A 487 SHEET 4 AA1 5 TYR A 552 GLU A 556 -1 O VAL A 555 N ALA A 506 SHEET 5 AA1 5 LEU A 541 CYS A 545 -1 N GLY A 543 O LEU A 554 SHEET 1 AA2 2 VAL A 623 VAL A 625 0 SHEET 2 AA2 2 MET A 631 ILE A 633 -1 O LYS A 632 N LEU A 624 SHEET 1 AA3 5 LEU B 472 PRO B 477 0 SHEET 2 AA3 5 VAL B 486 ILE B 492 -1 O MET B 488 N GLY B 475 SHEET 3 AA3 5 PRO B 502 LYS B 508 -1 O VAL B 507 N VAL B 487 SHEET 4 AA3 5 TYR B 552 GLU B 556 -1 O VAL B 555 N ALA B 506 SHEET 5 AA3 5 LEU B 541 CYS B 545 -1 N GLY B 543 O LEU B 554 SHEET 1 AA4 2 VAL B 623 VAL B 625 0 SHEET 2 AA4 2 MET B 631 ILE B 633 -1 O LYS B 632 N LEU B 624 SHEET 1 AA5 5 LEU C 472 PRO C 477 0 SHEET 2 AA5 5 VAL C 486 ILE C 492 -1 O MET C 488 N GLY C 475 SHEET 3 AA5 5 PRO C 502 MET C 509 -1 O VAL C 507 N VAL C 487 SHEET 4 AA5 5 TYR C 552 GLU C 556 -1 O VAL C 555 N ALA C 506 SHEET 5 AA5 5 LEU C 541 CYS C 545 -1 N GLY C 543 O LEU C 554 SHEET 1 AA6 2 VAL C 623 VAL C 625 0 SHEET 2 AA6 2 MET C 631 ILE C 633 -1 O LYS C 632 N LEU C 624 LINK SG CYS A 482 C1 WGF A1003 1555 1555 1.79 LINK SG CYS B 482 C1 WGF B2001 1555 1555 1.78 LINK SG CYS C 482 C1 WGF C2001 1555 1555 1.80 CRYST1 89.980 160.440 179.163 90.00 90.00 90.00 I 2 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011114 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006233 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005582 0.00000