HEADER ELECTRON TRANSPORT 03-OCT-23 8UF3 TITLE STRUCTURE OF CYTOCHROME C4 FROM NEISSERIA GONORRHOEAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C4; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA GONORRHOEAE F62; SOURCE 3 ORGANISM_TAXID: 528351; SOURCE 4 GENE: NGK_0144; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ELECTRON TRANSFER, CYTOCHROME C FAMILY, ELECTRON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR F.ZHONG,M.J.RAGUSA,E.V.PLETNEVA REVDAT 2 23-OCT-24 8UF3 1 REMARK REVDAT 1 11-SEP-24 8UF3 0 JRNL AUTH F.ZHONG,M.E.REIK,M.J.RAGUSA,E.V.PLETNEVA JRNL TITL THE STRUCTURE OF THE DIHEME CYTOCHROME C 4 FROM NEISSERIA JRNL TITL 2 GONORRHOEAE REVEALS MULTIPLE CONTRIBUTORS TO TUNING JRNL TITL 3 REDUCTION POTENTIALS. JRNL REF J.INORG.BIOCHEM. V. 253 12496 2024 JRNL REFN ISSN 0162-0134 JRNL PMID 38330683 JRNL DOI 10.1016/J.JINORGBIO.2024.112496 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1-4487-000 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 29063 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 1434 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.6100 - 5.2800 1.00 2889 122 0.1744 0.1880 REMARK 3 2 5.2700 - 4.1900 1.00 2809 123 0.1595 0.1999 REMARK 3 3 4.1900 - 3.6600 1.00 2776 133 0.1732 0.2252 REMARK 3 4 3.6600 - 3.3300 1.00 2768 151 0.1915 0.2360 REMARK 3 5 3.3200 - 3.0900 1.00 2733 140 0.2540 0.2521 REMARK 3 6 3.0900 - 2.9100 1.00 2732 166 0.2538 0.3178 REMARK 3 7 2.9000 - 2.7600 1.00 2718 166 0.2642 0.2950 REMARK 3 8 2.7600 - 2.6400 1.00 2724 163 0.2699 0.2754 REMARK 3 9 2.6400 - 2.5400 1.00 2715 160 0.2956 0.3510 REMARK 3 10 2.5400 - 2.4500 1.00 2765 110 0.3009 0.3895 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8UF3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1000277547. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9201 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29063 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 39.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 22.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 6Q2U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2 M MAGNESIUM SULFATE, 0.1 M MES, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 84.02350 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 84.02350 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 84.02350 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 84.02350 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 84.02350 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 84.02350 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 84.02350 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 84.02350 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 84.02350 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 84.02350 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 84.02350 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 84.02350 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 84.02350 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 84.02350 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 84.02350 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 84.02350 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 84.02350 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 84.02350 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 84.02350 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 84.02350 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 84.02350 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 84.02350 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 84.02350 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 84.02350 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 84.02350 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 84.02350 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 84.02350 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 84.02350 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 84.02350 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 84.02350 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 84.02350 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 84.02350 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 84.02350 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 84.02350 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 84.02350 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 84.02350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 PRO A 2 REMARK 465 MET B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 7 CG CD OE1 OE2 REMARK 470 GLN A 86 CG CD OE1 NE2 REMARK 470 LYS A 95 CG CD CE NZ REMARK 470 GLU A 175 CG CD OE1 OE2 REMARK 470 LYS A 179 CG CD CE NZ REMARK 470 LYS B 3 CG CD CE NZ REMARK 470 GLU B 7 CG CD OE1 OE2 REMARK 470 LYS B 54 CG CD CE NZ REMARK 470 LYS B 88 CG CD CE NZ REMARK 470 GLU B 91 CG CD OE1 OE2 REMARK 470 LYS B 95 CG CD CE NZ REMARK 470 GLU B 99 CG CD OE1 OE2 REMARK 470 ASP B 111 CG OD1 OD2 REMARK 470 LYS B 112 CG CD CE NZ REMARK 470 GLU B 134 CG CD OE1 OE2 REMARK 470 GLN B 160 CG CD OE1 NE2 REMARK 470 LYS B 179 CG CD CE NZ REMARK 470 ARG B 189 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 22 157.84 78.93 REMARK 500 ASN A 163 113.62 -173.09 REMARK 500 ALA B 22 154.40 83.75 REMARK 500 ASN B 26 71.98 -100.62 REMARK 500 GLU B 96 60.37 -103.86 REMARK 500 ASN B 97 65.74 26.65 REMARK 500 GLU B 134 12.15 54.20 REMARK 500 ASN B 163 117.36 179.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 140 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 21 NE2 REMARK 620 2 HEC A 201 NA 92.6 REMARK 620 3 HEC A 201 NB 86.4 87.0 REMARK 620 4 HEC A 201 NC 86.2 175.9 89.0 REMARK 620 5 HEC A 201 ND 93.1 91.3 178.2 92.7 REMARK 620 6 MET A 63 SD 174.6 83.1 90.1 97.9 90.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 202 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 121 NE2 REMARK 620 2 HEC A 202 NA 94.5 REMARK 620 3 HEC A 202 NB 91.6 89.6 REMARK 620 4 HEC A 202 NC 86.9 178.6 90.0 REMARK 620 5 HEC A 202 ND 88.7 90.2 179.6 90.2 REMARK 620 6 MET A 166 SD 172.3 93.0 90.3 85.7 89.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 21 NE2 REMARK 620 2 HEC B 201 NA 93.7 REMARK 620 3 HEC B 201 NB 89.1 90.3 REMARK 620 4 HEC B 201 NC 83.9 176.9 87.8 REMARK 620 5 HEC B 201 ND 88.0 91.8 176.5 89.9 REMARK 620 6 MET B 63 SD 175.3 82.5 93.7 100.0 89.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B 202 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 121 NE2 REMARK 620 2 HEC B 202 NA 93.3 REMARK 620 3 HEC B 202 NB 91.0 88.9 REMARK 620 4 HEC B 202 NC 84.8 177.7 92.2 REMARK 620 5 HEC B 202 ND 86.2 91.4 177.2 87.3 REMARK 620 6 MET B 166 SD 175.5 91.2 89.8 90.8 93.0 REMARK 620 N 1 2 3 4 5 DBREF 8UF3 A 1 189 UNP B4RQ30 B4RQ30_NEIG2 13 201 DBREF 8UF3 B 1 189 UNP B4RQ30 B4RQ30_NEIG2 13 201 SEQADV 8UF3 MET A -1 UNP B4RQ30 EXPRESSION TAG SEQADV 8UF3 GLY A 0 UNP B4RQ30 EXPRESSION TAG SEQADV 8UF3 MET B -1 UNP B4RQ30 EXPRESSION TAG SEQADV 8UF3 GLY B 0 UNP B4RQ30 EXPRESSION TAG SEQRES 1 A 191 MET GLY SER PRO LYS ALA ASP VAL GLU LYS GLY LYS GLN SEQRES 2 A 191 VAL ALA ALA THR VAL CYS ALA ALA CYS HIS ALA ALA ASP SEQRES 3 A 191 GLY ASN SER GLY ILE ALA MET TYR PRO ARG LEU ALA ALA SEQRES 4 A 191 GLN HIS THR ALA TYR ILE TYR HIS GLN THR ILE GLY ILE SEQRES 5 A 191 ARG ASP GLY LYS ARG THR HIS GLY SER ALA ALA VAL MET SEQRES 6 A 191 LYS PRO VAL VAL MET ASN LEU SER ASP GLN ASP ILE LEU SEQRES 7 A 191 ASN VAL SER ALA PHE TYR ALA LYS GLN GLN PRO LYS SER SEQRES 8 A 191 GLY GLU ALA ASN PRO LYS GLU ASN PRO GLU LEU GLY ALA SEQRES 9 A 191 LYS ILE TYR ARG GLY GLY LEU SER ASP LYS LYS VAL PRO SEQRES 10 A 191 ALA CYS MET SER CYS HIS GLY PRO SER GLY ALA GLY MET SEQRES 11 A 191 PRO GLY GLY GLY SER GLU ILE GLN ALA TYR PRO ARG LEU SEQRES 12 A 191 GLY GLY GLN HIS GLN ALA TYR ILE VAL GLU GLN MET ASN SEQRES 13 A 191 ALA TYR LYS SER GLY GLN ARG LYS ASN THR ILE MET GLU SEQRES 14 A 191 ASP ILE ALA ASN ARG MET SER GLU GLU ASP LEU LYS ALA SEQRES 15 A 191 VAL ALA ASN PHE ILE GLN GLY LEU ARG SEQRES 1 B 191 MET GLY SER PRO LYS ALA ASP VAL GLU LYS GLY LYS GLN SEQRES 2 B 191 VAL ALA ALA THR VAL CYS ALA ALA CYS HIS ALA ALA ASP SEQRES 3 B 191 GLY ASN SER GLY ILE ALA MET TYR PRO ARG LEU ALA ALA SEQRES 4 B 191 GLN HIS THR ALA TYR ILE TYR HIS GLN THR ILE GLY ILE SEQRES 5 B 191 ARG ASP GLY LYS ARG THR HIS GLY SER ALA ALA VAL MET SEQRES 6 B 191 LYS PRO VAL VAL MET ASN LEU SER ASP GLN ASP ILE LEU SEQRES 7 B 191 ASN VAL SER ALA PHE TYR ALA LYS GLN GLN PRO LYS SER SEQRES 8 B 191 GLY GLU ALA ASN PRO LYS GLU ASN PRO GLU LEU GLY ALA SEQRES 9 B 191 LYS ILE TYR ARG GLY GLY LEU SER ASP LYS LYS VAL PRO SEQRES 10 B 191 ALA CYS MET SER CYS HIS GLY PRO SER GLY ALA GLY MET SEQRES 11 B 191 PRO GLY GLY GLY SER GLU ILE GLN ALA TYR PRO ARG LEU SEQRES 12 B 191 GLY GLY GLN HIS GLN ALA TYR ILE VAL GLU GLN MET ASN SEQRES 13 B 191 ALA TYR LYS SER GLY GLN ARG LYS ASN THR ILE MET GLU SEQRES 14 B 191 ASP ILE ALA ASN ARG MET SER GLU GLU ASP LEU LYS ALA SEQRES 15 B 191 VAL ALA ASN PHE ILE GLN GLY LEU ARG HET HEC A 201 43 HET HEC A 202 43 HET SO4 A 203 5 HET HEC B 201 43 HET HEC B 202 43 HET SO4 B 203 5 HET SO4 B 204 5 HETNAM HEC HEME C HETNAM SO4 SULFATE ION FORMUL 3 HEC 4(C34 H34 FE N4 O4) FORMUL 5 SO4 3(O4 S 2-) FORMUL 10 HOH *52(H2 O) HELIX 1 AA1 ASP A 5 VAL A 16 1 12 HELIX 2 AA2 CYS A 17 ALA A 22 1 6 HELIX 3 AA3 HIS A 39 ASP A 52 1 14 HELIX 4 AA4 SER A 59 LYS A 64 1 6 HELIX 5 AA5 SER A 71 LYS A 84 1 14 HELIX 6 AA6 ASN A 97 GLY A 108 1 12 HELIX 7 AA7 LEU A 109 LYS A 113 5 5 HELIX 8 AA8 CYS A 117 GLY A 122 1 6 HELIX 9 AA9 HIS A 145 GLY A 159 1 15 HELIX 10 AB1 ASN A 163 ARG A 172 1 10 HELIX 11 AB2 SER A 174 GLY A 187 1 14 HELIX 12 AB3 ASP B 5 VAL B 16 1 12 HELIX 13 AB4 CYS B 17 ALA B 22 1 6 HELIX 14 AB5 HIS B 39 ASP B 52 1 14 HELIX 15 AB6 SER B 59 VAL B 62 5 4 HELIX 16 AB7 MET B 63 MET B 68 1 6 HELIX 17 AB8 SER B 71 LYS B 84 1 14 HELIX 18 AB9 ASN B 97 GLY B 107 1 11 HELIX 19 AC1 CYS B 117 GLY B 122 1 6 HELIX 20 AC2 HIS B 145 GLY B 159 1 15 HELIX 21 AC3 ASN B 163 ARG B 172 1 10 HELIX 22 AC4 SER B 174 GLY B 187 1 14 LINK SG CYS A 17 CAB HEC A 201 1555 1555 1.77 LINK SG CYS A 20 CAC HEC A 201 1555 1555 1.78 LINK SG CYS A 117 CAB HEC A 202 1555 1555 1.77 LINK SG CYS A 120 CAC HEC A 202 1555 1555 1.77 LINK SG CYS B 17 CAB HEC B 201 1555 1555 1.77 LINK SG CYS B 20 CAC HEC B 201 1555 1555 1.78 LINK SG CYS B 117 CAB HEC B 202 1555 1555 1.77 LINK SG CYS B 120 CAC HEC B 202 1555 1555 1.77 LINK NE2 HIS A 21 FE HEC A 201 1555 1555 2.08 LINK SD MET A 63 FE HEC A 201 1555 1555 2.37 LINK NE2 HIS A 121 FE HEC A 202 1555 1555 2.06 LINK SD MET A 166 FE HEC A 202 1555 1555 2.36 LINK NE2 HIS B 21 FE HEC B 201 1555 1555 2.04 LINK SD MET B 63 FE HEC B 201 1555 1555 2.39 LINK NE2 HIS B 121 FE HEC B 202 1555 1555 2.03 LINK SD MET B 166 FE HEC B 202 1555 1555 2.32 CRYST1 168.047 168.047 168.047 90.00 90.00 90.00 I 2 3 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005951 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005951 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005951 0.00000