HEADER VIRAL PROTEIN 04-OCT-23 8UFL TITLE CRYSTAL STRUCTURE OF SARS-UNIQUE DOMAIN (SUD) OF NSP3 FROM SARS TITLE 2 CORONAVIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PAPAIN-LIKE PROTEASE NSP3; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SARS-UNIQUE DOMAIN (SUD); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS; SOURCE 3 ORGANISM_TAXID: 2901879; SOURCE 4 GENE: 1A; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSBID, NSP3, SUD, CENTER FOR STRUCTURAL BIOLOGY OF KEYWDS 3 INFECTIOUS DISEASES, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,M.ROSAS-LEMUS,O.KIRYUKHINA,J.S.BRUNZELLE, AUTHOR 2 K.J.F.SATCHELL,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID),CENTER FOR STRUCTURAL BIOLOGY OF INFECTIOUS DISEASES (CSBID) REVDAT 1 18-OCT-23 8UFL 0 JRNL AUTH G.MINASOV,L.SHUVALOVA,M.ROSAS-LEMUS,O.KIRYUKHINA, JRNL AUTH 2 J.S.BRUNZELLE,K.J.F.SATCHELL, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF SARS-UNIQUE DOMAIN (SUD) OF NSP3 FROM JRNL TITL 2 SARS CORONAVIRUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 18109 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 928 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.51 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1262 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.3070 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4044 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 125 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.14000 REMARK 3 B22 (A**2) : 2.93000 REMARK 3 B33 (A**2) : 0.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.105 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.331 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.286 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.841 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4191 ; 0.004 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4051 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5677 ; 1.369 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9388 ; 0.333 ; 1.577 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 526 ; 1.581 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 172 ;16.218 ;23.023 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 767 ; 6.202 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ; 6.892 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 575 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4560 ; 0.055 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 844 ; 0.050 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 390 649 B 390 649 7416 0.130 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 389 A 490 REMARK 3 ORIGIN FOR THE GROUP (A): 31.0611 20.4866 3.6417 REMARK 3 T TENSOR REMARK 3 T11: 0.0400 T22: 0.0848 REMARK 3 T33: 0.0647 T12: -0.0047 REMARK 3 T13: 0.0079 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 2.3584 L22: 0.6538 REMARK 3 L33: 3.8165 L12: -0.1594 REMARK 3 L13: 1.2235 L23: 0.4400 REMARK 3 S TENSOR REMARK 3 S11: 0.0164 S12: -0.2994 S13: -0.0211 REMARK 3 S21: 0.1360 S22: 0.0906 S23: -0.0258 REMARK 3 S31: 0.0396 S32: -0.0469 S33: -0.1069 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 491 A 517 REMARK 3 ORIGIN FOR THE GROUP (A): 26.7224 26.7521 11.0550 REMARK 3 T TENSOR REMARK 3 T11: 0.1686 T22: 0.1064 REMARK 3 T33: 0.1195 T12: 0.0974 REMARK 3 T13: -0.0690 T23: -0.0319 REMARK 3 L TENSOR REMARK 3 L11: 4.3582 L22: 3.0536 REMARK 3 L33: 8.4386 L12: 2.7534 REMARK 3 L13: -0.2126 L23: -2.5990 REMARK 3 S TENSOR REMARK 3 S11: -0.2768 S12: -0.4585 S13: 0.0116 REMARK 3 S21: 0.2504 S22: -0.1120 S23: -0.2847 REMARK 3 S31: -0.7936 S32: -0.0085 S33: 0.3888 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 518 A 546 REMARK 3 ORIGIN FOR THE GROUP (A): 5.5112 5.0087 25.1348 REMARK 3 T TENSOR REMARK 3 T11: 0.0551 T22: 0.1153 REMARK 3 T33: 0.1665 T12: -0.0027 REMARK 3 T13: -0.0572 T23: 0.0365 REMARK 3 L TENSOR REMARK 3 L11: 1.9451 L22: 7.4691 REMARK 3 L33: 2.5041 L12: -0.1559 REMARK 3 L13: 1.4317 L23: -1.8375 REMARK 3 S TENSOR REMARK 3 S11: -0.0432 S12: -0.0178 S13: 0.2231 REMARK 3 S21: -0.2726 S22: 0.2741 S23: 0.4347 REMARK 3 S31: 0.2153 S32: -0.1679 S33: -0.2308 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 547 A 594 REMARK 3 ORIGIN FOR THE GROUP (A): 16.5926 -0.9298 34.8285 REMARK 3 T TENSOR REMARK 3 T11: 0.0922 T22: 0.0695 REMARK 3 T33: 0.0631 T12: 0.0245 REMARK 3 T13: -0.0117 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 2.2695 L22: 4.0529 REMARK 3 L33: 1.3792 L12: 0.5739 REMARK 3 L13: 0.4592 L23: -1.1193 REMARK 3 S TENSOR REMARK 3 S11: 0.0129 S12: 0.0054 S13: 0.0014 REMARK 3 S21: 0.3474 S22: -0.0959 S23: -0.1511 REMARK 3 S31: 0.1273 S32: 0.1564 S33: 0.0830 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 595 A 651 REMARK 3 ORIGIN FOR THE GROUP (A): 13.7161 11.1556 23.9214 REMARK 3 T TENSOR REMARK 3 T11: 0.0179 T22: 0.1389 REMARK 3 T33: 0.1685 T12: -0.0256 REMARK 3 T13: -0.0115 T23: 0.0768 REMARK 3 L TENSOR REMARK 3 L11: 2.6229 L22: 5.4177 REMARK 3 L33: 5.2383 L12: -1.3170 REMARK 3 L13: 1.9515 L23: -1.1293 REMARK 3 S TENSOR REMARK 3 S11: -0.1043 S12: 0.4052 S13: 0.3314 REMARK 3 S21: 0.0248 S22: -0.1118 S23: -0.3009 REMARK 3 S31: -0.3028 S32: 0.4034 S33: 0.2161 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 390 B 463 REMARK 3 ORIGIN FOR THE GROUP (A): 34.3547 19.5985 47.0572 REMARK 3 T TENSOR REMARK 3 T11: 0.0449 T22: 0.1447 REMARK 3 T33: 0.0862 T12: 0.0062 REMARK 3 T13: 0.0038 T23: 0.0424 REMARK 3 L TENSOR REMARK 3 L11: 4.6860 L22: 9.7049 REMARK 3 L33: 4.2978 L12: 2.5279 REMARK 3 L13: 3.0189 L23: -2.2843 REMARK 3 S TENSOR REMARK 3 S11: 0.1688 S12: 0.1212 S13: -0.0542 REMARK 3 S21: 0.2031 S22: 0.1754 S23: 0.7710 REMARK 3 S31: 0.0616 S32: 0.2968 S33: -0.3441 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 464 B 490 REMARK 3 ORIGIN FOR THE GROUP (A): 30.2177 24.4914 38.9603 REMARK 3 T TENSOR REMARK 3 T11: 0.1784 T22: 0.1917 REMARK 3 T33: 0.3137 T12: -0.0732 REMARK 3 T13: -0.0735 T23: 0.1505 REMARK 3 L TENSOR REMARK 3 L11: 1.6211 L22: 9.4564 REMARK 3 L33: 11.7484 L12: 1.3829 REMARK 3 L13: 3.0102 L23: 0.7604 REMARK 3 S TENSOR REMARK 3 S11: -0.4421 S12: 0.3951 S13: 0.2182 REMARK 3 S21: -0.4478 S22: 0.9605 S23: 1.1529 REMARK 3 S31: -1.1807 S32: 0.2009 S33: -0.5184 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 491 B 518 REMARK 3 ORIGIN FOR THE GROUP (A): 37.0576 27.1729 37.0358 REMARK 3 T TENSOR REMARK 3 T11: 0.3333 T22: 0.3850 REMARK 3 T33: 0.3400 T12: -0.2841 REMARK 3 T13: -0.2760 T23: 0.2044 REMARK 3 L TENSOR REMARK 3 L11: 10.4545 L22: 10.6086 REMARK 3 L33: 6.2053 L12: -7.0572 REMARK 3 L13: -3.9988 L23: -0.4757 REMARK 3 S TENSOR REMARK 3 S11: -0.1246 S12: 1.0660 S13: 0.0323 REMARK 3 S21: -0.2719 S22: -0.1904 S23: 0.7426 REMARK 3 S31: -0.7073 S32: 0.0315 S33: 0.3149 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 519 B 587 REMARK 3 ORIGIN FOR THE GROUP (A): 56.6934 5.4863 16.7575 REMARK 3 T TENSOR REMARK 3 T11: 0.2400 T22: 0.1909 REMARK 3 T33: 0.2976 T12: -0.0484 REMARK 3 T13: -0.0405 T23: 0.0521 REMARK 3 L TENSOR REMARK 3 L11: 2.1972 L22: 3.6496 REMARK 3 L33: 2.9090 L12: -1.9913 REMARK 3 L13: -0.5172 L23: 1.4037 REMARK 3 S TENSOR REMARK 3 S11: 0.0745 S12: 0.0490 S13: -0.5854 REMARK 3 S21: 0.2318 S22: -0.0461 S23: 0.1096 REMARK 3 S31: 0.3763 S32: -0.1759 S33: -0.0284 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 588 B 650 REMARK 3 ORIGIN FOR THE GROUP (A): 52.5519 16.2652 23.1296 REMARK 3 T TENSOR REMARK 3 T11: 0.0594 T22: 0.1395 REMARK 3 T33: 0.0841 T12: -0.0539 REMARK 3 T13: 0.0032 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 2.7605 L22: 3.1030 REMARK 3 L33: 2.5378 L12: -0.9146 REMARK 3 L13: 1.6265 L23: -0.4330 REMARK 3 S TENSOR REMARK 3 S11: 0.0415 S12: -0.3165 S13: -0.3233 REMARK 3 S21: 0.3461 S22: -0.0829 S23: 0.0013 REMARK 3 S31: 0.1395 S32: -0.4042 S33: 0.0414 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 8UFL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1000278007. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : BE REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19083 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : 0.11200 REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.80000 REMARK 200 R SYM FOR SHELL (I) : 0.80000 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 6.4 MG/ML, 0.3M SODIUM REMARK 280 CHLORIDE, 0.01M TRIS PH 8.3; SCREEN: CLASSICS II (F6), 0.2M REMARK 280 AMMONIUM SULFATE, 0.1M BIS-TRIS PH 5.5, 25% (W/V) PEG 3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.85000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.80100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.43100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.80100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.85000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.43100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 386 REMARK 465 ASN A 387 REMARK 465 ALA A 388 REMARK 465 SER A 652 REMARK 465 SER B 386 REMARK 465 ASN B 387 REMARK 465 ALA B 388 REMARK 465 LYS B 389 REMARK 465 GLU B 517 REMARK 465 SER B 651 REMARK 465 SER B 652 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 451 114.41 -170.74 REMARK 500 ASP A 481 -173.26 -173.88 REMARK 500 CYS A 507 -26.07 -148.93 REMARK 500 LYS A 508 -1.24 74.38 REMARK 500 SER A 516 71.20 -106.18 REMARK 500 ASN A 520 18.86 59.76 REMARK 500 TYR A 564 74.96 -100.61 REMARK 500 TYR A 576 88.21 -153.34 REMARK 500 VAL A 611 -51.98 73.98 REMARK 500 SER B 451 114.82 -171.31 REMARK 500 ASP B 481 -174.63 -170.75 REMARK 500 TYR B 564 73.47 -100.08 REMARK 500 VAL B 611 -52.64 74.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSBID-IDP53003.403 RELATED DB: TARGETTRACK DBREF 8UFL A 389 652 UNP P0C6U8 R1A_SARS 1207 1470 DBREF 8UFL B 389 652 UNP P0C6U8 R1A_SARS 1207 1470 SEQADV 8UFL SER A 386 UNP P0C6U8 EXPRESSION TAG SEQADV 8UFL ASN A 387 UNP P0C6U8 EXPRESSION TAG SEQADV 8UFL ALA A 388 UNP P0C6U8 EXPRESSION TAG SEQADV 8UFL SER B 386 UNP P0C6U8 EXPRESSION TAG SEQADV 8UFL ASN B 387 UNP P0C6U8 EXPRESSION TAG SEQADV 8UFL ALA B 388 UNP P0C6U8 EXPRESSION TAG SEQRES 1 A 267 SER ASN ALA LYS ILE LYS ALA CYS ILE ASP GLU VAL THR SEQRES 2 A 267 THR THR LEU GLU GLU THR LYS PHE LEU THR ASN LYS LEU SEQRES 3 A 267 LEU LEU PHE ALA ASP ILE ASN GLY LYS LEU TYR HIS ASP SEQRES 4 A 267 SER GLN ASN MET LEU ARG GLY GLU ASP MET SER PHE LEU SEQRES 5 A 267 GLU LYS ASP ALA PRO TYR MET VAL GLY ASP VAL ILE THR SEQRES 6 A 267 SER GLY ASP ILE THR CYS VAL VAL ILE PRO SER LYS LYS SEQRES 7 A 267 ALA GLY GLY THR THR GLU MET LEU SER ARG ALA LEU LYS SEQRES 8 A 267 LYS VAL PRO VAL ASP GLU TYR ILE THR THR TYR PRO GLY SEQRES 9 A 267 GLN GLY CYS ALA GLY TYR THR LEU GLU GLU ALA LYS THR SEQRES 10 A 267 ALA LEU LYS LYS CYS LYS SER ALA PHE TYR VAL LEU PRO SEQRES 11 A 267 SER GLU ALA PRO ASN ALA LYS GLU GLU ILE LEU GLY THR SEQRES 12 A 267 VAL SER TRP ASN LEU ARG GLU MET LEU ALA HIS ALA GLU SEQRES 13 A 267 GLU THR ARG LYS LEU MET PRO ILE CYS MET ASP VAL ARG SEQRES 14 A 267 ALA ILE MET ALA THR ILE GLN ARG LYS TYR LYS GLY ILE SEQRES 15 A 267 LYS ILE GLN GLU GLY ILE VAL ASP TYR GLY VAL ARG PHE SEQRES 16 A 267 PHE PHE TYR THR SER LYS GLU PRO VAL ALA SER ILE ILE SEQRES 17 A 267 THR LYS LEU ASN SER LEU ASN GLU PRO LEU VAL THR MET SEQRES 18 A 267 PRO ILE GLY TYR VAL THR HIS GLY PHE ASN LEU GLU GLU SEQRES 19 A 267 ALA ALA ARG CYS MET ARG SER LEU LYS ALA PRO ALA VAL SEQRES 20 A 267 VAL SER VAL SER SER PRO ASP ALA VAL THR THR TYR ASN SEQRES 21 A 267 GLY TYR LEU THR SER SER SER SEQRES 1 B 267 SER ASN ALA LYS ILE LYS ALA CYS ILE ASP GLU VAL THR SEQRES 2 B 267 THR THR LEU GLU GLU THR LYS PHE LEU THR ASN LYS LEU SEQRES 3 B 267 LEU LEU PHE ALA ASP ILE ASN GLY LYS LEU TYR HIS ASP SEQRES 4 B 267 SER GLN ASN MET LEU ARG GLY GLU ASP MET SER PHE LEU SEQRES 5 B 267 GLU LYS ASP ALA PRO TYR MET VAL GLY ASP VAL ILE THR SEQRES 6 B 267 SER GLY ASP ILE THR CYS VAL VAL ILE PRO SER LYS LYS SEQRES 7 B 267 ALA GLY GLY THR THR GLU MET LEU SER ARG ALA LEU LYS SEQRES 8 B 267 LYS VAL PRO VAL ASP GLU TYR ILE THR THR TYR PRO GLY SEQRES 9 B 267 GLN GLY CYS ALA GLY TYR THR LEU GLU GLU ALA LYS THR SEQRES 10 B 267 ALA LEU LYS LYS CYS LYS SER ALA PHE TYR VAL LEU PRO SEQRES 11 B 267 SER GLU ALA PRO ASN ALA LYS GLU GLU ILE LEU GLY THR SEQRES 12 B 267 VAL SER TRP ASN LEU ARG GLU MET LEU ALA HIS ALA GLU SEQRES 13 B 267 GLU THR ARG LYS LEU MET PRO ILE CYS MET ASP VAL ARG SEQRES 14 B 267 ALA ILE MET ALA THR ILE GLN ARG LYS TYR LYS GLY ILE SEQRES 15 B 267 LYS ILE GLN GLU GLY ILE VAL ASP TYR GLY VAL ARG PHE SEQRES 16 B 267 PHE PHE TYR THR SER LYS GLU PRO VAL ALA SER ILE ILE SEQRES 17 B 267 THR LYS LEU ASN SER LEU ASN GLU PRO LEU VAL THR MET SEQRES 18 B 267 PRO ILE GLY TYR VAL THR HIS GLY PHE ASN LEU GLU GLU SEQRES 19 B 267 ALA ALA ARG CYS MET ARG SER LEU LYS ALA PRO ALA VAL SEQRES 20 B 267 VAL SER VAL SER SER PRO ASP ALA VAL THR THR TYR ASN SEQRES 21 B 267 GLY TYR LEU THR SER SER SER HET CL A 701 1 HET CL A 702 1 HET CL A 703 1 HET CL A 704 1 HET CL A 705 1 HET CL A 706 1 HET CL A 707 1 HET CL A 708 1 HET CL A 709 1 HET SO4 A 710 5 HET SO4 A 711 5 HET SO4 A 712 5 HET SO4 A 713 5 HET SO4 A 714 5 HET CL B 701 1 HET CL B 702 1 HET CL B 703 1 HET CL B 704 1 HET CL B 705 1 HET CL B 706 1 HET CL B 707 1 HET SO4 B 708 5 HET SO4 B 709 5 HET SO4 B 710 5 HET SO4 B 711 5 HET SO4 B 712 5 HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 3 CL 16(CL 1-) FORMUL 12 SO4 10(O4 S 2-) FORMUL 29 HOH *125(H2 O) HELIX 1 AA1 THR A 400 LYS A 405 1 6 HELIX 2 AA2 TYR A 422 ASN A 427 1 6 HELIX 3 AA3 MET A 434 ASP A 440 1 7 HELIX 4 AA4 SER A 461 GLY A 465 5 5 HELIX 5 AA5 THR A 467 LYS A 476 1 10 HELIX 6 AA6 THR A 496 CYS A 507 1 12 HELIX 7 AA7 ASN A 520 ILE A 525 1 6 HELIX 8 AA8 ASN A 532 ARG A 544 1 13 HELIX 9 AA9 VAL A 553 TYR A 564 1 12 HELIX 10 AB1 PRO A 588 ASN A 600 1 13 HELIX 11 AB2 ASN A 616 ARG A 625 1 10 HELIX 12 AB3 SER A 637 SER A 650 1 14 HELIX 13 AB4 THR B 400 THR B 408 1 9 HELIX 14 AB5 TYR B 422 ASN B 427 1 6 HELIX 15 AB6 MET B 434 ASP B 440 1 7 HELIX 16 AB7 SER B 461 GLY B 465 5 5 HELIX 17 AB8 THR B 467 LYS B 476 1 10 HELIX 18 AB9 THR B 496 CYS B 507 1 12 HELIX 19 AC1 ASN B 520 ILE B 525 1 6 HELIX 20 AC2 ASN B 532 ARG B 544 1 13 HELIX 21 AC3 VAL B 553 TYR B 564 1 12 HELIX 22 AC4 PRO B 588 ASN B 600 1 13 HELIX 23 AC5 ASN B 616 ARG B 625 1 10 HELIX 24 AC6 SER B 637 SER B 650 1 14 SHEET 1 AA1 3 CYS A 393 GLU A 396 0 SHEET 2 AA1 3 ALA A 510 VAL A 513 1 O PHE A 511 N CYS A 393 SHEET 3 AA1 3 GLU A 482 THR A 485 1 N TYR A 483 O ALA A 510 SHEET 1 AA2 3 LEU A 411 ALA A 415 0 SHEET 2 AA2 3 ILE A 454 VAL A 458 1 O THR A 455 N LEU A 413 SHEET 3 AA2 3 VAL A 448 SER A 451 -1 N ILE A 449 O CYS A 456 SHEET 1 AA3 3 THR A 528 VAL A 529 0 SHEET 2 AA3 3 ALA A 631 SER A 634 1 O VAL A 633 N VAL A 529 SHEET 3 AA3 3 LEU A 603 THR A 605 1 N THR A 605 O VAL A 632 SHEET 1 AA4 3 LEU A 546 CYS A 550 0 SHEET 2 AA4 3 ARG A 579 TYR A 583 1 O PHE A 581 N ILE A 549 SHEET 3 AA4 3 GLY A 572 ASP A 575 -1 N VAL A 574 O PHE A 580 SHEET 1 AA5 3 CYS B 393 GLU B 396 0 SHEET 2 AA5 3 ALA B 510 VAL B 513 1 O PHE B 511 N CYS B 393 SHEET 3 AA5 3 GLU B 482 THR B 485 1 N TYR B 483 O ALA B 510 SHEET 1 AA6 3 LEU B 411 ALA B 415 0 SHEET 2 AA6 3 ILE B 454 VAL B 458 1 O THR B 455 N LEU B 413 SHEET 3 AA6 3 VAL B 448 SER B 451 -1 N ILE B 449 O CYS B 456 SHEET 1 AA7 3 THR B 528 VAL B 529 0 SHEET 2 AA7 3 ALA B 631 SER B 634 1 O VAL B 633 N VAL B 529 SHEET 3 AA7 3 LEU B 603 THR B 605 1 N THR B 605 O VAL B 632 SHEET 1 AA8 3 MET B 547 CYS B 550 0 SHEET 2 AA8 3 ARG B 579 TYR B 583 1 O PHE B 581 N ILE B 549 SHEET 3 AA8 3 GLY B 572 ASP B 575 -1 N GLY B 572 O PHE B 582 SSBOND 1 CYS A 492 CYS A 623 1555 1555 2.05 SSBOND 2 CYS B 492 CYS B 623 1555 1555 2.06 CISPEP 1 ALA A 441 PRO A 442 0 0.09 CISPEP 2 ALA B 441 PRO B 442 0 0.16 CRYST1 67.700 84.862 93.602 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014771 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011784 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010684 0.00000