HEADER TRANSFERASE 11-OCT-23 8UJE TITLE X-RAY CRYSTAL STRUCTURE OF TOXOPLASMA GONDII GALNAC-T3 IN COMPLEX WITH TITLE 2 UDP-GALNAC, MN2+, AND MUC5AC-3,13 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOSYL TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.4.1.41; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TOXOPLASMA GONDII ME49; SOURCE 3 ORGANISM_TAXID: 508771; SOURCE 4 GENE: TGME49_318730; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: SMD1168; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PPIC; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPICZ ALPHA A KEYWDS GT-A FOLD GALNAC GLYCOSYLTRANSFERASE, MUCIN-TYPE O-GLYCOSYLATION, KEYWDS 2 TOXOPLASMA GONDII CYST WALL GLYCOSYLATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.KUMAR,N.L.SAMARA REVDAT 2 22-MAY-24 8UJE 1 JRNL REVDAT 1 15-MAY-24 8UJE 0 JRNL AUTH P.KUMAR,T.TOMITA,T.A.GERKEN,C.J.BALLARD,Y.S.LEE,L.M.WEISS, JRNL AUTH 2 N.L.SAMARA JRNL TITL A TOXOPLASMA GONDII O-GLYCOSYLTRANSFERASE THAT MODULATES JRNL TITL 2 BRADYZOITE CYST WALL RIGIDITY IS DISTINCT FROM HOST JRNL TITL 3 HOMOLOGUES. JRNL REF NAT COMMUN V. 15 3792 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38710711 JRNL DOI 10.1038/S41467-024-48253-W REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 24495 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.150 REMARK 3 FREE R VALUE TEST SET COUNT : 1996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9100 - 5.9700 1.00 1735 161 0.1550 0.1885 REMARK 3 2 5.9600 - 4.7600 1.00 1648 146 0.1468 0.1933 REMARK 3 3 4.7600 - 4.1600 1.00 1626 145 0.1271 0.1580 REMARK 3 4 4.1600 - 3.7800 1.00 1638 147 0.1554 0.2110 REMARK 3 5 3.7800 - 3.5100 1.00 1613 141 0.1891 0.2332 REMARK 3 6 3.5100 - 3.3100 1.00 1599 144 0.2052 0.2604 REMARK 3 7 3.3100 - 3.1400 1.00 1594 143 0.2133 0.2910 REMARK 3 8 3.1400 - 3.0100 1.00 1601 136 0.2219 0.2861 REMARK 3 9 3.0100 - 2.8900 1.00 1615 153 0.2372 0.2825 REMARK 3 10 2.8900 - 2.7900 1.00 1608 129 0.2385 0.2576 REMARK 3 11 2.7900 - 2.7000 1.00 1563 151 0.2463 0.3417 REMARK 3 12 2.7000 - 2.6300 1.00 1609 120 0.2792 0.3730 REMARK 3 13 2.6300 - 2.5600 1.00 1572 160 0.2829 0.3270 REMARK 3 14 2.5600 - 2.5000 0.93 1478 120 0.2807 0.3352 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.341 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.025 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4455 REMARK 3 ANGLE : 0.518 6047 REMARK 3 CHIRALITY : 0.041 617 REMARK 3 PLANARITY : 0.005 794 REMARK 3 DIHEDRAL : 15.010 1663 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 429 THROUGH 628 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.0946 -16.4187 59.1663 REMARK 3 T TENSOR REMARK 3 T11: 0.3334 T22: 0.3556 REMARK 3 T33: 0.3878 T12: 0.0255 REMARK 3 T13: 0.0031 T23: -0.0394 REMARK 3 L TENSOR REMARK 3 L11: 0.1088 L22: 2.7279 REMARK 3 L33: 3.7752 L12: -0.0336 REMARK 3 L13: 0.4492 L23: -2.3746 REMARK 3 S TENSOR REMARK 3 S11: -0.1299 S12: -0.0531 S13: -0.0126 REMARK 3 S21: 0.0588 S22: 0.0432 S23: -0.1192 REMARK 3 S31: 0.0178 S32: 0.0196 S33: 0.0842 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0415 -15.7755 21.6150 REMARK 3 T TENSOR REMARK 3 T11: 0.4304 T22: 0.5093 REMARK 3 T33: 0.3912 T12: -0.0914 REMARK 3 T13: -0.0563 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 1.9430 L22: 3.0201 REMARK 3 L33: 1.3390 L12: 0.7261 REMARK 3 L13: 0.0576 L23: 0.1309 REMARK 3 S TENSOR REMARK 3 S11: -0.2319 S12: 0.2496 S13: -0.0993 REMARK 3 S21: -0.4543 S22: 0.1356 S23: 0.2028 REMARK 3 S31: -0.0806 S32: 0.0343 S33: 0.0974 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 308 THROUGH 428 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0688 -10.6189 39.5189 REMARK 3 T TENSOR REMARK 3 T11: 0.3878 T22: 0.3324 REMARK 3 T33: 0.4086 T12: -0.0310 REMARK 3 T13: -0.0123 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.1332 L22: 0.2133 REMARK 3 L33: 0.9566 L12: 0.1281 REMARK 3 L13: 0.5306 L23: -0.1083 REMARK 3 S TENSOR REMARK 3 S11: -0.0810 S12: 0.0199 S13: -0.0677 REMARK 3 S21: -0.0513 S22: 0.0690 S23: -0.0058 REMARK 3 S31: 0.0080 S32: -0.0247 S33: 0.0203 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8UJE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1000278139. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : FMB OXFORD SINGLE CRYSTAL SIDE REMARK 200 BOUNCE MONOCHROMATOR REMARK 200 OPTICS : CRL SINGLE AXIS FOCUSING SYSTEM REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24551 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.14700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.94400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.180 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CHES PH 9.5 AND 14-20% PEG 8000 REMARK 280 (W/V), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.99300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.33550 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.99300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 83.33550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 73 REMARK 465 ALA A 74 REMARK 465 ARG A 75 REMARK 465 ASP A 76 REMARK 465 VAL A 77 REMARK 465 GLN A 78 REMARK 465 GLU A 79 REMARK 465 GLY A 80 REMARK 465 VAL A 81 REMARK 465 SER A 82 REMARK 465 SER A 83 REMARK 465 PHE A 84 REMARK 465 GLU A 85 REMARK 465 GLU A 86 REMARK 465 SER A 87 REMARK 465 GLY A 88 REMARK 465 GLY A 89 REMARK 465 ALA A 90 REMARK 465 GLN A 91 REMARK 465 LEU A 92 REMARK 465 PRO A 93 REMARK 465 PRO A 94 REMARK 465 ARG A 95 REMARK 465 VAL A 96 REMARK 465 HIS A 97 REMARK 465 ALA A 98 REMARK 465 LEU A 99 REMARK 465 GLU A 100 REMARK 465 VAL A 101 REMARK 465 LEU A 102 REMARK 465 SER A 629 REMARK 465 ARG A 630 REMARK 465 SER A 631 REMARK 465 ILE A 632 REMARK 465 ARG A 633 REMARK 465 SER A 634 REMARK 465 GLY A 635 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 133 33.60 -93.69 REMARK 500 ASP A 157 39.01 -94.15 REMARK 500 PRO A 242 156.91 -48.74 REMARK 500 ALA A 362 -72.21 -85.14 REMARK 500 ALA A 378 -125.86 44.18 REMARK 500 PHE A 385 -100.00 48.66 REMARK 500 THR A 388 -11.94 78.76 REMARK 500 ASP A 442 -131.52 54.05 REMARK 500 ASP A 552 97.42 -168.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 802 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 276 OD2 REMARK 620 2 HIS A 278 NE2 99.2 REMARK 620 3 HIS A 414 NE2 91.1 86.0 REMARK 620 4 UDP A 801 O1A 100.2 81.8 164.5 REMARK 620 5 UDP A 801 O2B 90.6 170.2 94.3 96.1 REMARK 620 6 HOH A 903 O 163.0 65.4 81.0 85.2 104.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 803 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 333 NE2 REMARK 620 2 GLU A 336 OE1 134.8 REMARK 620 3 GLU A 336 OE2 141.9 61.2 REMARK 620 4 HOH A 901 O 57.9 80.5 136.3 REMARK 620 5 HOH A 905 O 74.2 124.3 70.7 123.6 REMARK 620 6 HOH A 920 O 75.7 149.0 99.4 124.1 61.2 REMARK 620 7 HOH A 925 O 89.1 97.2 126.6 75.3 135.2 74.5 REMARK 620 N 1 2 3 4 5 6 DBREF1 8UJE A 74 635 UNP A0A125YMZ8_TOXGM DBREF2 8UJE A A0A125YMZ8 74 635 SEQADV 8UJE GLY A 73 UNP A0A125YMZ EXPRESSION TAG SEQADV 8UJE SER A 297 UNP A0A125YMZ GLY 297 ENGINEERED MUTATION SEQRES 1 A 563 GLY ALA ARG ASP VAL GLN GLU GLY VAL SER SER PHE GLU SEQRES 2 A 563 GLU SER GLY GLY ALA GLN LEU PRO PRO ARG VAL HIS ALA SEQRES 3 A 563 LEU GLU VAL LEU GLU GLY ALA GLY PRO GLY ARG LEU HIS SEQRES 4 A 563 GLY ARG LEU GLY ILE LYS PRO ASP GLY GLN PRO GLY TYR SEQRES 5 A 563 THR ARG ALA PRO SER PRO PRO THR ASP LEU SER MET PRO SEQRES 6 A 563 GLN ALA LEU ALA ARG GLY GLY GLY PHE ASN LEU TYR LEU SEQRES 7 A 563 SER ASP HIS LEU GLU LEU ASP ARG THR ALA PRO ASP ALA SEQRES 8 A 563 ARG HIS ALA SER CYS ARG GLN LEU HIS TYR ASP LEU SER SEQRES 9 A 563 THR LEU PRO LYS ALA SER VAL ILE ILE VAL PHE TYR ASN SEQRES 10 A 563 GLU PRO PHE SER THR LEU MET ARG SER VAL HIS SER VAL SEQRES 11 A 563 LEU ASN GLY THR PRO PRO GLN ILE LEU GLU GLU LEU ILE SEQRES 12 A 563 LEU VAL ASP ASP GLY SER THR LEU PRO TYR ILE ARG GLU SEQRES 13 A 563 ASP GLY ASN GLN GLN LEU VAL GLU TYR LEU LYS LEU LEU SEQRES 14 A 563 PRO ALA LYS VAL ARG LEU ILE ARG ASN GLU VAL ARG LYS SEQRES 15 A 563 GLY ILE VAL GLY ALA ARG MET LYS GLY ILE ARG ALA SER SEQRES 16 A 563 ARG ALA PRO ILE PHE ALA ILE LEU ASP SER HIS ILE GLU SEQRES 17 A 563 VAL SER PRO GLN TRP LEU GLU PRO LEU LEU LEU ARG ILE SEQRES 18 A 563 LYS GLU ASP SER ARG ARG VAL VAL MET PRO GLN ILE ASP SEQRES 19 A 563 GLY ILE ASP ALA GLU THR PHE LYS HIS ILE ALA GLY GLY SEQRES 20 A 563 ILE GLY CYS LYS LEU GLY PHE LEU TRP LYS LEU MET GLU SEQRES 21 A 563 HIS SER TYR GLU GLY HIS GLN THR ALA ARG LEU PRO PRO SEQRES 22 A 563 GLU GLU ARG GLN PRO SER PRO THR ASP PHE GLN THR SER SEQRES 23 A 563 PRO ALA MET ALA GLY GLY LEU PHE ALA ALA ASN LYS ALA SEQRES 24 A 563 PHE PHE PHE ASP VAL GLY ALA TYR ASP GLU ASP PHE GLN SEQRES 25 A 563 PHE TRP GLY THR GLU ASN LEU GLU LEU SER PHE ARG LEU SEQRES 26 A 563 TRP GLN CYS GLY GLY VAL LEU GLU CYS ALA PRO CYS SER SEQRES 27 A 563 ARG VAL TYR HIS ILE PHE ARG LYS GLY GLY SER GLY TYR SEQRES 28 A 563 SER SER PRO GLY ASP SER ILE THR ILE ASN LYS MET ARG SEQRES 29 A 563 THR MET LEU TRP MET ASP GLU TYR ALA ASP LEU ALA TRP SEQRES 30 A 563 ARG VAL ILE GLY LYS PRO ARG VAL ASN TYR ARG PRO GLU SEQRES 31 A 563 SER LEU GLU LYS ARG ARG GLU TRP ARG LYS ARG LYS GLY SEQRES 32 A 563 CYS LYS SER PHE ARG TRP PHE MET GLU ASN VAL PHE PRO SEQRES 33 A 563 GLU GLY ASP VAL VAL THR LEU ASP ASP VAL PRO TYR LEU SEQRES 34 A 563 GLY PRO LEU ARG ASN ASP LYS ILE GLY MET CYS LEU ASP SEQRES 35 A 563 ASN MET GLY TRP ALA SER PRO GLY HIS ALA VAL GLY LEU SEQRES 36 A 563 GLU TYR CYS HIS GLY GLY ASP THR GLN THR PHE MET PHE SEQRES 37 A 563 PHE ARG LYS VAL GLY HIS VAL MET PRO VAL ASN ASP ASP SEQRES 38 A 563 GLU ALA CYS LEU GLN PRO SER GLY ARG LEU ASP TRP CYS SEQRES 39 A 563 ARG GLY THR ALA GLN PHE TRP TRP ASP PHE THR SER SER SEQRES 40 A 563 GLY GLN LEU MET PHE ARG GLU THR LYS GLN CYS LEU SER SEQRES 41 A 563 ALA PHE GLY ARG LYS LEU ARG MET VAL GLU CYS ASP ASP SEQRES 42 A 563 THR ASP PRO TYR GLN ILE TRP SER TRP THR ALA TYR ASN SEQRES 43 A 563 PRO PRO ASP THR PHE THR PHE PRO SER VAL SER ARG SER SEQRES 44 A 563 ILE ARG SER GLY HET UDP A 801 36 HET MN A 802 1 HET MN A 803 1 HET PEG A 804 17 HET PEG A 805 17 HET PEG A 806 17 HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM MN MANGANESE (II) ION HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 2 UDP C9 H14 N2 O12 P2 FORMUL 3 MN 2(MN 2+) FORMUL 5 PEG 3(C4 H10 O3) FORMUL 8 HOH *52(H2 O) HELIX 1 AA1 SER A 135 GLY A 143 1 9 HELIX 2 AA2 ASN A 147 LEU A 154 1 8 HELIX 3 AA3 HIS A 165 ARG A 169 5 5 HELIX 4 AA4 PRO A 191 THR A 206 1 16 HELIX 5 AA5 PRO A 207 GLN A 209 5 3 HELIX 6 AA6 GLN A 232 LYS A 239 1 8 HELIX 7 AA7 GLY A 255 SER A 267 1 13 HELIX 8 AA8 TRP A 285 ASP A 296 1 12 HELIX 9 AA9 GLU A 336 ALA A 341 1 6 HELIX 10 AB1 ARG A 342 LEU A 343 5 2 HELIX 11 AB2 PRO A 344 ARG A 348 5 5 HELIX 12 AB3 LYS A 370 VAL A 376 1 7 HELIX 13 AB4 THR A 388 CYS A 400 1 13 HELIX 14 AB5 ASP A 428 MET A 438 1 11 HELIX 15 AB6 LEU A 439 GLU A 443 5 5 HELIX 16 AB7 TYR A 444 ILE A 452 1 9 HELIX 17 AB8 ARG A 460 GLY A 475 1 16 HELIX 18 AB9 SER A 478 VAL A 486 1 9 HELIX 19 AC1 THR A 494 VAL A 498 5 5 HELIX 20 AC2 GLY A 533 THR A 535 5 3 HELIX 21 AC3 THR A 569 PHE A 572 5 4 HELIX 22 AC4 ALA A 593 LYS A 597 5 5 HELIX 23 AC5 ASP A 607 ILE A 611 5 5 SHEET 1 AA1 5 VAL A 245 ASN A 250 0 SHEET 2 AA1 5 LEU A 211 ASP A 219 1 N LEU A 216 O ILE A 248 SHEET 3 AA1 5 ALA A 181 PHE A 187 1 N ILE A 185 O ILE A 215 SHEET 4 AA1 5 ILE A 271 LEU A 275 1 O ALA A 273 N ILE A 184 SHEET 5 AA1 5 PHE A 366 ASN A 369 -1 O PHE A 366 N ILE A 274 SHEET 1 AA2 4 ILE A 279 VAL A 281 0 SHEET 2 AA2 4 VAL A 403 ILE A 415 -1 O TYR A 413 N GLU A 280 SHEET 3 AA2 4 ARG A 299 ILE A 308 1 N MET A 302 O GLU A 405 SHEET 4 AA2 4 HIS A 315 ILE A 316 -1 O ILE A 316 N GLY A 307 SHEET 1 AA3 3 ILE A 279 VAL A 281 0 SHEET 2 AA3 3 VAL A 403 ILE A 415 -1 O TYR A 413 N GLU A 280 SHEET 3 AA3 3 GLN A 356 THR A 357 -1 N GLN A 356 O CYS A 406 SHEET 1 AA4 2 LEU A 324 LEU A 327 0 SHEET 2 AA4 2 MET A 331 SER A 334 -1 O HIS A 333 N GLY A 325 SHEET 1 AA5 5 GLY A 526 GLU A 528 0 SHEET 2 AA5 5 MET A 511 ASP A 514 -1 N ASP A 514 O GLY A 526 SHEET 3 AA5 5 TYR A 500 ASN A 506 -1 N ASN A 506 O MET A 511 SHEET 4 AA5 5 THR A 537 PHE A 541 -1 O PHE A 538 N GLY A 502 SHEET 5 AA5 5 HIS A 546 PRO A 549 -1 O MET A 548 N MET A 539 SHEET 1 AA6 4 GLY A 526 GLU A 528 0 SHEET 2 AA6 4 MET A 511 ASP A 514 -1 N ASP A 514 O GLY A 526 SHEET 3 AA6 4 TYR A 500 ASN A 506 -1 N ASN A 506 O MET A 511 SHEET 4 AA6 4 SER A 613 ALA A 616 -1 O SER A 613 N ARG A 505 SHEET 1 AA7 2 ALA A 555 LEU A 557 0 SHEET 2 AA7 2 LEU A 563 TRP A 565 -1 O ASP A 564 N CYS A 556 SHEET 1 AA8 4 TRP A 574 PHE A 576 0 SHEET 2 AA8 4 LEU A 582 PHE A 584 -1 O MET A 583 N ASP A 575 SHEET 3 AA8 4 GLN A 589 SER A 592 -1 O LEU A 591 N LEU A 582 SHEET 4 AA8 4 ARG A 599 GLU A 602 -1 O VAL A 601 N CYS A 590 SSBOND 1 CYS A 168 CYS A 409 1555 1555 2.04 SSBOND 2 CYS A 322 CYS A 406 1555 1555 2.03 SSBOND 3 CYS A 400 CYS A 476 1555 1555 2.04 SSBOND 4 CYS A 512 CYS A 530 1555 1555 2.04 SSBOND 5 CYS A 556 CYS A 566 1555 1555 2.03 SSBOND 6 CYS A 590 CYS A 603 1555 1555 2.04 LINK OD2 ASP A 276 MN MN A 802 1555 1555 2.20 LINK NE2 HIS A 278 MN MN A 802 1555 1555 2.30 LINK NE2 HIS A 333 MN MN A 803 1555 1555 2.34 LINK OE1 GLU A 336 MN MN A 803 1555 1555 2.17 LINK OE2 GLU A 336 MN MN A 803 1555 1555 2.15 LINK NE2 HIS A 414 MN MN A 802 1555 1555 2.24 LINK O1A UDP A 801 MN MN A 802 1555 1555 2.65 LINK O2B UDP A 801 MN MN A 802 1555 1555 2.53 LINK MN MN A 802 O HOH A 903 1555 1555 2.22 LINK MN MN A 803 O HOH A 901 1555 1555 2.19 LINK MN MN A 803 O HOH A 905 1555 1555 2.20 LINK MN MN A 803 O HOH A 920 1555 1555 2.17 LINK MN MN A 803 O HOH A 925 1555 1555 2.18 CRYST1 62.409 65.986 166.671 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016023 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015155 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006000 0.00000