HEADER UNKNOWN FUNCTION 12-OCT-23 8UKC TITLE SOLUTION NMR STRUCTURE OF THE LASSO PEPTIDE CHLOROLASSIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: LASSOPEPTIDE CHLOROLASSIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LENTZEA JIANGXIENSIS; SOURCE 3 ORGANISM_TAXID: 641025; SOURCE 4 EXPRESSION_SYSTEM: STREPTOMYCES ALBUS J1074; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 457425 KEYWDS LASSOPEPTIDE, CHLOROLASSIN, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.SAAD,L.ZHU,L.A.HARRIS,K.E.SHELTON,D.A.MITCHELL REVDAT 1 25-SEP-24 8UKC 0 JRNL AUTH L.A.HARRIS,H.SAAD,K.E.SHELTON,L.ZHU,X.GUO,D.A.MITCHELL JRNL TITL TRYPTOPHAN-CENTRIC BIOINFORMATICS IDENTIFIES NEW LASSO JRNL TITL 2 PEPTIDE MODIFICATIONS. JRNL REF BIOCHEMISTRY V. 63 865 2024 JRNL REFN ISSN 0006-2960 JRNL PMID 38498885 JRNL DOI 10.1021/ACS.BIOCHEM.4C00035 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH 2.51 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8UKC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1000278064. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313.15 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 6 MM LASSOPEPTIDE, 50% H2O/50% REMARK 210 ACN-D3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 2D 1H-13C HSQC; 2D 1H-13C HMBC REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ REMARK 210 SPECTROMETER MODEL : VNMRS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMRJ 4.2, MESTRELAB (MNOVA / REMARK 210 MESTRENOVA / MESTREC) 14.3.0, REMARK 210 SPARKY, X-PLOR NIH 2.51 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 4 -116.63 -83.98 REMARK 500 1 GLN A 5 -33.33 -137.47 REMARK 500 1 PRO A 7 155.30 -46.13 REMARK 500 1 ASP A 9 -119.97 -108.21 REMARK 500 1 ALA A 11 -75.43 -128.11 REMARK 500 1 LEU A 13 -176.95 56.53 REMARK 500 2 SER A 4 -118.61 -97.37 REMARK 500 2 GLN A 5 -38.39 -133.37 REMARK 500 2 ASN A 6 -178.69 -52.82 REMARK 500 2 ASP A 9 -120.29 -121.61 REMARK 500 2 ALA A 11 -66.81 -123.82 REMARK 500 2 LEU A 13 169.10 47.00 REMARK 500 3 SER A 4 -115.28 -91.79 REMARK 500 3 GLN A 5 -38.40 -132.41 REMARK 500 3 ASN A 6 179.43 -51.56 REMARK 500 3 ASP A 9 -118.39 -116.67 REMARK 500 3 ALA A 11 -66.50 -124.92 REMARK 500 3 LEU A 13 168.59 47.28 REMARK 500 4 SER A 4 -119.14 -87.96 REMARK 500 4 ASN A 6 178.23 -56.46 REMARK 500 4 ASP A 9 -125.55 -126.01 REMARK 500 4 ALA A 11 -54.53 -136.72 REMARK 500 4 LEU A 13 166.39 49.63 REMARK 500 5 SER A 4 -121.92 -94.90 REMARK 500 5 ASN A 6 -179.56 -56.06 REMARK 500 5 ASP A 9 -120.12 -123.15 REMARK 500 5 ALA A 11 -59.75 -130.46 REMARK 500 5 LEU A 13 166.67 50.46 REMARK 500 6 ILE A 2 16.08 -140.31 REMARK 500 6 SER A 4 -120.86 -84.50 REMARK 500 6 GLN A 5 -34.93 -134.12 REMARK 500 6 PRO A 7 157.51 -45.53 REMARK 500 6 ASP A 9 -131.39 -130.82 REMARK 500 6 ALA A 11 -76.70 -151.40 REMARK 500 6 LEU A 13 179.85 55.64 REMARK 500 7 ILE A 2 16.27 -143.74 REMARK 500 7 SER A 4 -119.65 -88.98 REMARK 500 7 GLN A 5 -34.05 -136.38 REMARK 500 7 PRO A 7 151.19 -49.86 REMARK 500 7 ASP A 9 -119.77 -114.00 REMARK 500 7 ALA A 11 -76.65 -126.19 REMARK 500 7 LEU A 13 -176.52 56.06 REMARK 500 8 SER A 4 -117.20 -84.92 REMARK 500 8 GLN A 5 -34.45 -135.00 REMARK 500 8 PRO A 7 156.08 -45.41 REMARK 500 8 ASP A 9 -119.93 -108.90 REMARK 500 8 ALA A 11 -73.99 -127.65 REMARK 500 8 LEU A 13 -176.79 54.75 REMARK 500 9 SER A 4 -117.98 -84.38 REMARK 500 9 GLN A 5 -33.83 -134.59 REMARK 500 REMARK 500 THIS ENTRY HAS 123 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 31109 RELATED DB: BMRB REMARK 900 SOLUTION NMR STRUCTURE OF THE LASSO PEPTIDE CHLOROLASSIN DBREF 8UKC A 1 15 PDB 8UKC 8UKC 1 15 SEQRES 1 A 15 GLY ILE GLY SER GLN ASN PRO 5CW ASP THR ALA 5CW LEU SEQRES 2 A 15 TRP ASP HET 5CW A 8 24 HET 5CW A 12 24 HETNAM 5CW 5-CHLORO-L-TRYPTOPHAN FORMUL 1 5CW 2(C11 H11 CL N2 O2) LINK N GLY A 1 CG ASP A 9 1555 1555 1.33 LINK C PRO A 7 N 5CW A 8 1555 1555 1.33 LINK C 5CW A 8 N ASP A 9 1555 1555 1.33 LINK C ALA A 11 N 5CW A 12 1555 1555 1.33 LINK C 5CW A 12 N LEU A 13 1555 1555 1.33 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1