HEADER TRANSPORT PROTEIN 19-OCT-23 8UO9 TITLE STRUCTURE OF SYNAPTIC VESICLE PROTEIN 2A IN COMPLEX WITH A NANOBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: SYNAPTIC VESICLE GLYCOPROTEIN 2A; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: NANOBODY; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SV2A; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: TSA201; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 12 ORGANISM_TAXID: 9844; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SYNAPTIC VESICLE, SLC22, INHIBITOR, NANOBODY, AEDS, TRANSPORT PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR A.MITTAL,M.F.MARTIN,E.LEVIN,C.ADAMS,M.YANG,M.LEDECQ,P.S.HORANYI, AUTHOR 2 J.A.COLEMAN REVDAT 2 26-JUN-24 8UO9 1 AUTHOR JRNL REVDAT 1 22-MAY-24 8UO9 0 JRNL AUTH A.MITTAL,M.F.MARTIN,E.J.LEVIN,C.ADAMS,M.YANG,L.PROVINS, JRNL AUTH 2 A.HALL,M.PROCTER,M.LEDECQ,A.HILLISCH,C.WOLFF,M.GILLARD, JRNL AUTH 3 P.S.HORANYI,J.A.COLEMAN JRNL TITL STRUCTURES OF SYNAPTIC VESICLE PROTEIN 2A AND 2B BOUND TO JRNL TITL 2 ANTICONVULSANTS. JRNL REF NAT.STRUCT.MOL.BIOL. 2024 JRNL REFN ESSN 1545-9985 JRNL PMID 38898101 JRNL DOI 10.1038/S41594-024-01335-1 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SERIALEM, COOT, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.300 REMARK 3 NUMBER OF PARTICLES : 250856 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8UO9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1000277845. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : PROTEIN WITH A NANOBODY REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 4.38 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 750.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 77160 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, G, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 63 REMARK 465 GLY A 64 REMARK 465 TYR A 65 REMARK 465 TYR A 66 REMARK 465 ARG A 67 REMARK 465 GLY A 68 REMARK 465 GLU A 69 REMARK 465 GLY A 70 REMARK 465 THR A 71 REMARK 465 GLN A 72 REMARK 465 ASP A 73 REMARK 465 GLU A 74 REMARK 465 GLU A 75 REMARK 465 GLU A 76 REMARK 465 GLY A 77 REMARK 465 GLY A 78 REMARK 465 ALA A 79 REMARK 465 SER A 80 REMARK 465 SER A 81 REMARK 465 ASP A 82 REMARK 465 ALA A 83 REMARK 465 THR A 84 REMARK 465 GLU A 85 REMARK 465 GLY A 86 REMARK 465 HIS A 87 REMARK 465 ASP A 88 REMARK 465 GLU A 89 REMARK 465 ASP A 90 REMARK 465 ASP A 91 REMARK 465 GLU A 92 REMARK 465 ILE A 93 REMARK 465 TYR A 94 REMARK 465 GLU A 95 REMARK 465 GLY A 96 REMARK 465 GLU A 97 REMARK 465 TYR A 98 REMARK 465 GLN A 99 REMARK 465 GLY A 100 REMARK 465 ILE A 101 REMARK 465 PRO A 102 REMARK 465 ARG A 103 REMARK 465 ALA A 104 REMARK 465 GLU A 105 REMARK 465 SER A 106 REMARK 465 GLY A 107 REMARK 465 GLY A 108 REMARK 465 LYS A 109 REMARK 465 GLY A 110 REMARK 465 GLU A 111 REMARK 465 ARG A 112 REMARK 465 MET A 113 REMARK 465 ALA A 114 REMARK 465 ASP A 115 REMARK 465 GLY A 116 REMARK 465 ALA A 117 REMARK 465 PRO A 118 REMARK 465 LEU A 119 REMARK 465 ALA A 120 REMARK 465 GLY A 121 REMARK 465 VAL A 122 REMARK 465 ARG A 123 REMARK 465 GLY A 124 REMARK 465 GLY A 125 REMARK 465 LEU A 126 REMARK 465 SER A 127 REMARK 465 ASP A 128 REMARK 465 GLY A 129 REMARK 465 GLU A 130 REMARK 465 GLY A 131 REMARK 465 PRO A 132 REMARK 465 PRO A 133 REMARK 465 GLY A 134 REMARK 465 GLY A 135 REMARK 465 ARG A 136 REMARK 465 GLY A 137 REMARK 465 GLU A 138 REMARK 465 ALA A 139 REMARK 465 GLN A 140 REMARK 465 ARG A 141 REMARK 465 ARG A 142 REMARK 465 LYS A 143 REMARK 465 MET A 197 REMARK 465 CYS A 198 REMARK 465 LEU A 199 REMARK 465 SER A 200 REMARK 465 ASP A 201 REMARK 465 SER A 202 REMARK 465 ASN A 203 REMARK 465 LYS A 204 REMARK 465 GLY A 205 REMARK 465 LYS A 398 REMARK 465 THR A 399 REMARK 465 ILE A 400 REMARK 465 HIS A 401 REMARK 465 GLN A 402 REMARK 465 GLU A 403 REMARK 465 ASP A 404 REMARK 465 GLU A 405 REMARK 465 LEU A 406 REMARK 465 ILE A 407 REMARK 465 GLU A 408 REMARK 465 ILE A 409 REMARK 465 GLN A 410 REMARK 465 SER A 411 REMARK 465 ASP A 412 REMARK 465 THR A 413 REMARK 465 GLY A 414 REMARK 465 THR A 415 REMARK 465 TRP A 416 REMARK 465 GLY A 582 REMARK 465 CYS A 583 REMARK 465 PRO A 584 REMARK 465 LEU A 585 REMARK 465 ASP A 586 REMARK 465 VAL A 587 REMARK 465 THR A 588 REMARK 465 GLY A 589 REMARK 465 THR A 590 REMARK 465 GLY A 591 REMARK 465 GLU A 592 REMARK 465 GLY A 593 REMARK 465 GLN A 739 REMARK 465 VAL A 740 REMARK 465 LEU A 741 REMARK 465 GLN A 742 REMARK 465 ALA B 120 REMARK 465 ALA B 121 REMARK 465 ALA B 122 REMARK 465 GLU B 123 REMARK 465 ASN B 124 REMARK 465 LEU B 125 REMARK 465 TYR B 126 REMARK 465 PHE B 127 REMARK 465 GLN B 128 REMARK 465 GLY B 129 REMARK 465 GLY B 130 REMARK 465 SER B 131 REMARK 465 GLY B 132 REMARK 465 HIS B 133 REMARK 465 HIS B 134 REMARK 465 HIS B 135 REMARK 465 HIS B 136 REMARK 465 HIS B 137 REMARK 465 HIS B 138 REMARK 465 HIS B 139 REMARK 465 HIS B 140 REMARK 465 HIS B 141 REMARK 465 HIS B 142 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 144 CG CD OE1 OE2 REMARK 470 ARG A 145 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 195 CG CD CE NZ REMARK 470 MET A 324 CG SD CE REMARK 470 TYR A 328 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN A 329 CG CD OE1 NE2 REMARK 470 ARG A 423 CG CD NE CZ NH1 NH2 REMARK 470 MET A 471 CG SD CE REMARK 470 GLU A 490 CG CD OE1 OE2 REMARK 470 VAL A 495 CG1 CG2 REMARK 470 PHE A 497 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE A 499 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 504 CG CD OE1 NE2 REMARK 470 ARG A 507 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 512 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 514 CG OD1 OD2 REMARK 470 LEU A 519 CG CD1 CD2 REMARK 470 ARG A 520 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 524 CG1 CG2 REMARK 470 ASP A 528 CG OD1 OD2 REMARK 470 THR A 544 OG1 CG2 REMARK 470 GLU A 581 CG CD OE1 OE2 REMARK 470 ARG A 737 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 1 CG CD OE1 NE2 REMARK 470 VAL B 2 CG1 CG2 REMARK 470 GLN B 3 CG CD OE1 NE2 REMARK 470 LEU B 4 CG CD1 CD2 REMARK 470 VAL B 5 CG1 CG2 REMARK 470 GLU B 6 CG CD OE1 OE2 REMARK 470 LEU B 11 CG CD1 CD2 REMARK 470 VAL B 12 CG1 CG2 REMARK 470 GLN B 13 CG CD OE1 NE2 REMARK 470 PRO B 14 CG CD REMARK 470 SER B 17 OG REMARK 470 LEU B 18 CG CD1 CD2 REMARK 470 ARG B 19 CG CD NE CZ NH1 NH2 REMARK 470 SER B 21 OG REMARK 470 CYS B 22 SG REMARK 470 SER B 25 OG REMARK 470 SER B 27 OG REMARK 470 ILE B 28 CG1 CG2 CD1 REMARK 470 PHE B 29 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN B 30 CG OD1 ND2 REMARK 470 MET B 31 CG SD CE REMARK 470 ARG B 32 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 33 CG1 CG2 REMARK 470 MET B 34 CG SD CE REMARK 470 TRP B 36 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 36 CZ3 CH2 REMARK 470 TYR B 37 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG B 38 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 39 CG CD OE1 NE2 REMARK 470 PRO B 41 CG CD REMARK 470 GLU B 43 CG CD OE1 OE2 REMARK 470 GLN B 44 CG CD OE1 NE2 REMARK 470 ARG B 45 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 46 CG CD OE1 OE2 REMARK 470 SER B 47 OG REMARK 470 VAL B 48 CG1 CG2 REMARK 470 SER B 50 OG REMARK 470 MET B 51 CG SD CE REMARK 470 ASP B 55 CG OD1 OD2 REMARK 470 LYS B 56 CG CD CE NZ REMARK 470 THR B 57 OG1 CG2 REMARK 470 THR B 58 OG1 CG2 REMARK 470 TYR B 59 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP B 61 CG OD1 OD2 REMARK 470 SER B 62 OG REMARK 470 VAL B 63 CG1 CG2 REMARK 470 LYS B 64 CG CD CE NZ REMARK 470 ARG B 66 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 67 CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR B 68 OG1 CG2 REMARK 470 ILE B 69 CG1 CG2 CD1 REMARK 470 SER B 70 OG REMARK 470 ARG B 71 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 72 CG OD1 OD2 REMARK 470 ASN B 73 CG OD1 ND2 REMARK 470 LYS B 75 CG CD CE NZ REMARK 470 ASN B 76 CG OD1 ND2 REMARK 470 THR B 77 OG1 CG2 REMARK 470 VAL B 78 CG1 CG2 REMARK 470 LEU B 80 CG CD1 CD2 REMARK 470 GLN B 81 CG CD OE1 NE2 REMARK 470 MET B 82 CG SD CE REMARK 470 ASN B 83 CG OD1 ND2 REMARK 470 SER B 84 OG REMARK 470 LEU B 85 CG CD1 CD2 REMARK 470 LYS B 86 CG CD CE NZ REMARK 470 PRO B 87 CG CD REMARK 470 GLU B 88 CG CD OE1 OE2 REMARK 470 ASP B 89 CG OD1 OD2 REMARK 470 THR B 90 OG1 CG2 REMARK 470 VAL B 92 CG1 CG2 REMARK 470 TYR B 93 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR B 94 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 CYS B 95 SG REMARK 470 HIS B 96 CG ND1 CD2 CE1 NE2 REMARK 470 VAL B 98 CG1 CG2 REMARK 470 ASP B 99 CG OD1 OD2 REMARK 470 LEU B 100 CG CD1 CD2 REMARK 470 THR B 101 OG1 CG2 REMARK 470 ARG B 102 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 103 CG OD1 ND2 REMARK 470 PRO B 105 CG CD REMARK 470 ARG B 106 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 107 CG1 CG2 REMARK 470 TYR B 108 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TRP B 109 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 109 CZ3 CH2 REMARK 470 GLN B 111 CG CD OE1 NE2 REMARK 470 THR B 113 OG1 CG2 REMARK 470 GLN B 114 CG CD OE1 NE2 REMARK 470 VAL B 115 CG1 CG2 REMARK 470 THR B 116 OG1 CG2 REMARK 470 VAL B 117 CG1 CG2 REMARK 470 SER B 118 OG REMARK 470 SER B 119 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 195 77.38 -100.18 REMARK 500 ILE A 315 58.63 -116.14 REMARK 500 PRO A 316 2.07 -69.48 REMARK 500 SER A 332 -6.58 75.28 REMARK 500 GLU A 389 67.01 -102.00 REMARK 500 GLN A 418 56.94 38.70 REMARK 500 TYR A 443 -7.52 78.16 REMARK 500 SER A 523 66.84 31.13 REMARK 500 THR A 540 57.47 -93.57 REMARK 500 THR A 550 77.50 -100.91 REMARK 500 TYR A 557 -118.77 58.12 REMARK 500 THR A 711 7.18 58.51 REMARK 500 MET B 34 123.32 -28.58 REMARK 500 GLU B 43 98.39 -62.65 REMARK 500 ARG B 66 -52.01 -148.03 REMARK 500 ALA B 74 -7.34 -52.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PS1 A 803 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-42431 RELATED DB: EMDB REMARK 900 STRUCTURE OF A PROTEIN DBREF 8UO9 A 64 742 UNP Q7L0J3 SV2A_HUMAN 64 742 DBREF 8UO9 B 1 142 PDB 8UO9 8UO9 1 142 SEQADV 8UO9 MET A 63 UNP Q7L0J3 INITIATING METHIONINE SEQRES 1 A 680 MET GLY TYR TYR ARG GLY GLU GLY THR GLN ASP GLU GLU SEQRES 2 A 680 GLU GLY GLY ALA SER SER ASP ALA THR GLU GLY HIS ASP SEQRES 3 A 680 GLU ASP ASP GLU ILE TYR GLU GLY GLU TYR GLN GLY ILE SEQRES 4 A 680 PRO ARG ALA GLU SER GLY GLY LYS GLY GLU ARG MET ALA SEQRES 5 A 680 ASP GLY ALA PRO LEU ALA GLY VAL ARG GLY GLY LEU SER SEQRES 6 A 680 ASP GLY GLU GLY PRO PRO GLY GLY ARG GLY GLU ALA GLN SEQRES 7 A 680 ARG ARG LYS GLU ARG GLU GLU LEU ALA GLN GLN TYR GLU SEQRES 8 A 680 ALA ILE LEU ARG GLU CYS GLY HIS GLY ARG PHE GLN TRP SEQRES 9 A 680 THR LEU TYR PHE VAL LEU GLY LEU ALA LEU MET ALA ASP SEQRES 10 A 680 GLY VAL GLU VAL PHE VAL VAL GLY PHE VAL LEU PRO SER SEQRES 11 A 680 ALA GLU LYS ASP MET CYS LEU SER ASP SER ASN LYS GLY SEQRES 12 A 680 MET LEU GLY LEU ILE VAL TYR LEU GLY MET MET VAL GLY SEQRES 13 A 680 ALA PHE LEU TRP GLY GLY LEU ALA ASP ARG LEU GLY ARG SEQRES 14 A 680 ARG GLN CYS LEU LEU ILE SER LEU SER VAL ASN SER VAL SEQRES 15 A 680 PHE ALA PHE PHE SER SER PHE VAL GLN GLY TYR GLY THR SEQRES 16 A 680 PHE LEU PHE CYS ARG LEU LEU SER GLY VAL GLY ILE GLY SEQRES 17 A 680 GLY SER ILE PRO ILE VAL PHE SER TYR PHE SER GLU PHE SEQRES 18 A 680 LEU ALA GLN GLU LYS ARG GLY GLU HIS LEU SER TRP LEU SEQRES 19 A 680 CYS MET PHE TRP MET ILE GLY GLY VAL TYR ALA ALA ALA SEQRES 20 A 680 MET ALA TRP ALA ILE ILE PRO HIS TYR GLY TRP SER PHE SEQRES 21 A 680 GLN MET GLY SER ALA TYR GLN PHE HIS SER TRP ARG VAL SEQRES 22 A 680 PHE VAL LEU VAL CYS ALA PHE PRO SER VAL PHE ALA ILE SEQRES 23 A 680 GLY ALA LEU THR THR GLN PRO GLU SER PRO ARG PHE PHE SEQRES 24 A 680 LEU GLU ASN GLY LYS HIS ASP GLU ALA TRP MET VAL LEU SEQRES 25 A 680 LYS GLN VAL HIS ASP THR ASN MET ARG ALA LYS GLY HIS SEQRES 26 A 680 PRO GLU ARG VAL PHE SER VAL THR HIS ILE LYS THR ILE SEQRES 27 A 680 HIS GLN GLU ASP GLU LEU ILE GLU ILE GLN SER ASP THR SEQRES 28 A 680 GLY THR TRP TYR GLN ARG TRP GLY VAL ARG ALA LEU SER SEQRES 29 A 680 LEU GLY GLY GLN VAL TRP GLY ASN PHE LEU SER CYS PHE SEQRES 30 A 680 GLY PRO GLU TYR ARG ARG ILE THR LEU MET MET MET GLY SEQRES 31 A 680 VAL TRP PHE THR MET SER PHE SER TYR TYR GLY LEU THR SEQRES 32 A 680 VAL TRP PHE PRO ASP MET ILE ARG HIS LEU GLN ALA VAL SEQRES 33 A 680 ASP TYR ALA SER ARG THR LYS VAL PHE PRO GLY GLU ARG SEQRES 34 A 680 VAL GLU HIS VAL THR PHE ASN PHE THR LEU GLU ASN GLN SEQRES 35 A 680 ILE HIS ARG GLY GLY GLN TYR PHE ASN ASP LYS PHE ILE SEQRES 36 A 680 GLY LEU ARG LEU LYS SER VAL SER PHE GLU ASP SER LEU SEQRES 37 A 680 PHE GLU GLU CYS TYR PHE GLU ASP VAL THR SER SER ASN SEQRES 38 A 680 THR PHE PHE ARG ASN CYS THR PHE ILE ASN THR VAL PHE SEQRES 39 A 680 TYR ASN THR ASP LEU PHE GLU TYR LYS PHE VAL ASN SER SEQRES 40 A 680 ARG LEU ILE ASN SER THR PHE LEU HIS ASN LYS GLU GLY SEQRES 41 A 680 CYS PRO LEU ASP VAL THR GLY THR GLY GLU GLY ALA TYR SEQRES 42 A 680 MET VAL TYR PHE VAL SER PHE LEU GLY THR LEU ALA VAL SEQRES 43 A 680 LEU PRO GLY ASN ILE VAL SER ALA LEU LEU MET ASP LYS SEQRES 44 A 680 ILE GLY ARG LEU ARG MET LEU ALA GLY SER SER VAL MET SEQRES 45 A 680 SER CYS VAL SER CYS PHE PHE LEU SER PHE GLY ASN SER SEQRES 46 A 680 GLU SER ALA MET ILE ALA LEU LEU CYS LEU PHE GLY GLY SEQRES 47 A 680 VAL SER ILE ALA SER TRP ASN ALA LEU ASP VAL LEU THR SEQRES 48 A 680 VAL GLU LEU TYR PRO SER ASP LYS ARG THR THR ALA PHE SEQRES 49 A 680 GLY PHE LEU ASN ALA LEU CYS LYS LEU ALA ALA VAL LEU SEQRES 50 A 680 GLY ILE SER ILE PHE THR SER PHE VAL GLY ILE THR LYS SEQRES 51 A 680 ALA ALA PRO ILE LEU PHE ALA SER ALA ALA LEU ALA LEU SEQRES 52 A 680 GLY SER SER LEU ALA LEU LYS LEU PRO GLU THR ARG GLY SEQRES 53 A 680 GLN VAL LEU GLN SEQRES 1 B 142 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 B 142 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 B 142 SER ILE PHE ASN MET ARG VAL MET GLY TRP TYR ARG GLN SEQRES 4 B 142 ALA PRO GLY GLU GLN ARG GLU SER VAL ALA SER MET ALA SEQRES 5 B 142 SER GLY ASP LYS THR THR TYR ALA ASP SER VAL LYS GLY SEQRES 6 B 142 ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR VAL SEQRES 7 B 142 ALA LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR ALA SEQRES 8 B 142 VAL TYR TYR CYS HIS ALA VAL ASP LEU THR ARG ASN GLY SEQRES 9 B 142 PRO ARG VAL TYR TRP GLY GLN GLY THR GLN VAL THR VAL SEQRES 10 B 142 SER SER ALA ALA ALA GLU ASN LEU TYR PHE GLN GLY GLY SEQRES 11 B 142 SER GLY HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET NAG G 1 14 HET NAG G 2 14 HET NAG I 1 14 HET NAG I 2 14 HET X49 A 801 29 HET Y01 A 802 35 HET PS1 A 803 26 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM X49 (4R)-1-{[(4S)-2-(METHOXYMETHYL)-6-(TRIFLUOROMETHYL) HETNAM 2 X49 IMIDAZO[2,1-B][1,3,4]THIADIAZOL-5-YL]METHYL}-4-(4,4,4- HETNAM 3 X49 TRIFLUOROBUTYL)PYRROLIDIN-2-ONE HETNAM Y01 CHOLESTEROL HEMISUCCINATE HETNAM PS1 1,2-DIDECANOYL-SN-GLYCERO-3-[PHOSPHO-L-SERINE] HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 6(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 6 X49 C16 H18 F6 N4 O2 S FORMUL 7 Y01 C31 H50 O4 FORMUL 8 PS1 C26 H49 N O10 P 1- HELIX 1 AA1 GLU A 146 GLY A 160 1 15 HELIX 2 AA2 GLY A 162 PHE A 188 1 27 HELIX 3 AA3 MET A 206 GLY A 208 5 3 HELIX 4 AA4 LEU A 209 GLY A 230 1 22 HELIX 5 AA5 GLY A 230 SER A 250 1 21 HELIX 6 AA6 GLY A 254 GLU A 282 1 29 HELIX 7 AA7 ALA A 285 ARG A 289 5 5 HELIX 8 AA8 GLY A 290 LEU A 296 1 7 HELIX 9 AA9 CYS A 297 ILE A 315 1 19 HELIX 10 AB1 SER A 332 THR A 352 1 21 HELIX 11 AB2 SER A 357 GLY A 365 1 9 HELIX 12 AB3 LYS A 366 GLY A 386 1 21 HELIX 13 AB4 TRP A 420 CYS A 438 1 19 HELIX 14 AB5 TYR A 443 ARG A 483 1 41 HELIX 15 AB6 MET A 596 ALA A 607 1 12 HELIX 16 AB7 VAL A 608 ALA A 616 1 9 HELIX 17 AB8 GLY A 623 GLY A 645 1 23 HELIX 18 AB9 SER A 647 TYR A 677 1 31 HELIX 19 AC1 LYS A 681 PHE A 707 1 27 HELIX 20 AC2 ALA A 713 LEU A 731 1 19 HELIX 21 AC3 ASP B 61 LYS B 64 5 4 HELIX 22 AC4 ASN B 73 LYS B 75 5 3 SHEET 1 AA1 2 LYS A 515 PHE A 516 0 SHEET 2 AA1 2 TYR A 535 PHE A 536 1 O TYR A 535 N PHE A 516 SHEET 1 AA2 3 SER A 525 GLU A 532 0 SHEET 2 AA2 3 PHE A 545 VAL A 555 1 O ARG A 547 N PHE A 526 SHEET 3 AA2 3 LEU A 571 THR A 575 1 O THR A 575 N THR A 554 SHEET 1 AA3 2 ASN A 558 THR A 559 0 SHEET 2 AA3 2 HIS A 578 ASN A 579 1 O HIS A 578 N THR A 559 SHEET 1 AA4 4 GLN B 3 VAL B 5 0 SHEET 2 AA4 4 LEU B 18 SER B 25 -1 O ALA B 23 N VAL B 5 SHEET 3 AA4 4 THR B 77 MET B 82 -1 O VAL B 78 N CYS B 22 SHEET 4 AA4 4 PHE B 67 ASP B 72 -1 N SER B 70 O ALA B 79 SHEET 1 AA5 6 GLY B 10 VAL B 12 0 SHEET 2 AA5 6 THR B 113 VAL B 117 1 O GLN B 114 N GLY B 10 SHEET 3 AA5 6 ALA B 91 ASP B 99 -1 N TYR B 93 O THR B 113 SHEET 4 AA5 6 ARG B 32 GLN B 39 -1 N GLN B 39 O VAL B 92 SHEET 5 AA5 6 ARG B 45 SER B 50 -1 O GLU B 46 N ARG B 38 SHEET 6 AA5 6 THR B 58 TYR B 59 -1 O THR B 58 N SER B 50 SHEET 1 AA6 4 GLY B 10 VAL B 12 0 SHEET 2 AA6 4 THR B 113 VAL B 117 1 O GLN B 114 N GLY B 10 SHEET 3 AA6 4 ALA B 91 ASP B 99 -1 N TYR B 93 O THR B 113 SHEET 4 AA6 4 ARG B 106 TRP B 109 -1 O ARG B 106 N ASP B 99 LINK ND2 ASN A 498 C1 NAG I 1 1555 1555 1.43 LINK ND2 ASN A 548 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN A 573 C1 NAG D 1 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.45 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.44 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000