HEADER SIGNALING PROTEIN 06-NOV-23 8UWC TITLE SITE-ONE PROTEASE WITHOUT SPRING COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ENDOPEPTIDASE S1P,SUBTILISIN/KEXIN-ISOZYME 1,SKI-1; COMPND 5 EC: 3.4.21.112; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MBTPS1, KIAA0091, S1P, SKI1; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_ATCC_NUMBER: CRL-3022 KEYWDS SERINE PROTEASE CHOLESTEROL METABOLISM ZYMOGEN ACTIVATION PROTEIN KEYWDS 2 COMPLEX GLYCOPROTEIN SECRETORY PATHWAY, SIGNALING PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR D.L.KOBER REVDAT 2 24-JUL-24 8UWC 1 JRNL REVDAT 1 10-JUL-24 8UWC 0 JRNL AUTH S.HENDRIX,V.DARTIGUE,H.HALL,S.BAWARIA,J.KINGMA,B.BAJAJ, JRNL AUTH 2 N.ZELCER,D.L.KOBER JRNL TITL SPRING LICENSES S1P-MEDIATED CLEAVAGE OF SREBP2 BY JRNL TITL 2 DISPLACING AN INHIBITORY PRO-DOMAIN. JRNL REF NAT COMMUN V. 15 5732 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38977690 JRNL DOI 10.1038/S41467-024-50068-8 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SERIALEM, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.270 REMARK 3 NUMBER OF PARTICLES : 659523 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8UWC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1000278944. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : MATURED SITE-1 PROTEASE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.60 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : FLAG-S1P-HIS PURIFIED USING REMARK 245 NINTA CHROMATOGRAPHY AND GEL FILTRATION. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 6139 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : TFS FALCON 4I (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1600.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -5 REMARK 465 GLU A -4 REMARK 465 THR A -3 REMARK 465 ASP A -2 REMARK 465 THR A -1 REMARK 465 LEU A 0 REMARK 465 LEU A 1 REMARK 465 LEU A 2 REMARK 465 TRP A 3 REMARK 465 VAL A 4 REMARK 465 LEU A 5 REMARK 465 LEU A 6 REMARK 465 LEU A 7 REMARK 465 TRP A 8 REMARK 465 VAL A 9 REMARK 465 PRO A 10 REMARK 465 GLY A 11 REMARK 465 SER A 12 REMARK 465 THR A 13 REMARK 465 GLY A 14 REMARK 465 ASP A 15 REMARK 465 TYR A 16 REMARK 465 LYS A 17 REMARK 465 ASP A 18 REMARK 465 ASP A 19 REMARK 465 ASP A 20 REMARK 465 ASP A 21 REMARK 465 LYS A 22 REMARK 465 ASP A 23 REMARK 465 ARG A 24 REMARK 465 LEU A 25 REMARK 465 GLU A 26 REMARK 465 LYS A 27 REMARK 465 LYS A 28 REMARK 465 SER A 29 REMARK 465 PHE A 30 REMARK 465 GLU A 31 REMARK 465 LYS A 32 REMARK 465 ALA A 33 REMARK 465 PRO A 34 REMARK 465 CYS A 35 REMARK 465 PRO A 36 REMARK 465 GLY A 37 REMARK 465 CYS A 38 REMARK 465 SER A 39 REMARK 465 HIS A 40 REMARK 465 LEU A 41 REMARK 465 TYR A 138 REMARK 465 ALA A 139 REMARK 465 GLU A 140 REMARK 465 SER A 141 REMARK 465 ASP A 142 REMARK 465 PRO A 143 REMARK 465 THR A 144 REMARK 465 VAL A 145 REMARK 465 PRO A 146 REMARK 465 CYS A 147 REMARK 465 ASN A 148 REMARK 465 GLU A 149 REMARK 465 THR A 150 REMARK 465 ARG A 151 REMARK 465 TRP A 152 REMARK 465 SER A 153 REMARK 465 GLN A 154 REMARK 465 LYS A 155 REMARK 465 TRP A 156 REMARK 465 GLN A 157 REMARK 465 SER A 158 REMARK 465 SER A 159 REMARK 465 ARG A 160 REMARK 465 PRO A 161 REMARK 465 LEU A 162 REMARK 465 ARG A 163 REMARK 465 ARG A 164 REMARK 465 ALA A 165 REMARK 465 SER A 166 REMARK 465 LEU A 167 REMARK 465 SER A 168 REMARK 465 LEU A 169 REMARK 465 GLY A 170 REMARK 465 SER A 171 REMARK 465 GLY A 172 REMARK 465 PHE A 173 REMARK 465 TRP A 174 REMARK 465 HIS A 175 REMARK 465 ALA A 176 REMARK 465 THR A 177 REMARK 465 GLY A 178 REMARK 465 ARG A 179 REMARK 465 HIS A 180 REMARK 465 SER A 181 REMARK 465 SER A 182 REMARK 465 ARG A 183 REMARK 465 ARG A 184 REMARK 465 LEU A 185 REMARK 465 LEU A 186 REMARK 465 ARG A 187 REMARK 465 ALA A 188 REMARK 465 ILE A 189 REMARK 465 PRO A 190 REMARK 465 ASN A 338 REMARK 465 ASP A 339 REMARK 465 GLY A 340 REMARK 465 PRO A 341 REMARK 465 LEU A 342 REMARK 465 TYR A 343 REMARK 465 GLY A 344 REMARK 465 THR A 345 REMARK 465 LEU A 346 REMARK 465 ASN A 347 REMARK 465 ASN A 348 REMARK 465 SER A 372 REMARK 465 ARG A 373 REMARK 465 GLY A 374 REMARK 465 MET A 375 REMARK 465 THR A 376 REMARK 465 THR A 377 REMARK 465 TRP A 378 REMARK 465 GLU A 379 REMARK 465 LEU A 380 REMARK 465 PRO A 381 REMARK 465 GLY A 382 REMARK 465 GLY A 383 REMARK 465 TYR A 384 REMARK 465 GLU A 594 REMARK 465 SER A 595 REMARK 465 LYS A 596 REMARK 465 ASN A 597 REMARK 465 PRO A 617 REMARK 465 PRO A 618 REMARK 465 ARG A 619 REMARK 465 SER A 620 REMARK 465 LYS A 621 REMARK 465 ARG A 622 REMARK 465 VAL A 623 REMARK 465 LEU A 624 REMARK 465 TRP A 625 REMARK 465 ASP A 626 REMARK 465 GLN A 627 REMARK 465 TYR A 628 REMARK 465 HIS A 629 REMARK 465 ASN A 630 REMARK 465 LEU A 631 REMARK 465 ARG A 632 REMARK 465 TYR A 633 REMARK 465 PRO A 634 REMARK 465 PRO A 635 REMARK 465 GLY A 636 REMARK 465 TYR A 637 REMARK 465 PHE A 638 REMARK 465 PRO A 639 REMARK 465 ARG A 640 REMARK 465 ASP A 641 REMARK 465 ASN A 642 REMARK 465 LEU A 643 REMARK 465 ARG A 644 REMARK 465 MET A 645 REMARK 465 LYS A 646 REMARK 465 ASN A 647 REMARK 465 ASP A 648 REMARK 465 PRO A 649 REMARK 465 LEU A 650 REMARK 465 ASP A 651 REMARK 465 TRP A 652 REMARK 465 ASN A 653 REMARK 465 GLY A 654 REMARK 465 ASP A 655 REMARK 465 HIS A 656 REMARK 465 ILE A 657 REMARK 465 HIS A 658 REMARK 465 THR A 659 REMARK 465 ASN A 660 REMARK 465 PHE A 661 REMARK 465 ARG A 662 REMARK 465 ASP A 663 REMARK 465 MET A 664 REMARK 465 TYR A 665 REMARK 465 GLN A 666 REMARK 465 HIS A 667 REMARK 465 LEU A 668 REMARK 465 ARG A 669 REMARK 465 SER A 670 REMARK 465 MET A 671 REMARK 465 GLY A 672 REMARK 465 TYR A 673 REMARK 465 PHE A 674 REMARK 465 VAL A 675 REMARK 465 GLU A 676 REMARK 465 VAL A 677 REMARK 465 LEU A 678 REMARK 465 GLY A 679 REMARK 465 ALA A 680 REMARK 465 PRO A 681 REMARK 465 PHE A 682 REMARK 465 THR A 683 REMARK 465 CYS A 684 REMARK 465 PHE A 685 REMARK 465 ASP A 686 REMARK 465 ALA A 687 REMARK 465 SER A 688 REMARK 465 GLN A 689 REMARK 465 TYR A 690 REMARK 465 GLY A 691 REMARK 465 THR A 692 REMARK 465 LEU A 693 REMARK 465 LEU A 694 REMARK 465 MET A 695 REMARK 465 VAL A 696 REMARK 465 ASP A 697 REMARK 465 SER A 698 REMARK 465 GLU A 699 REMARK 465 GLU A 700 REMARK 465 GLU A 701 REMARK 465 TYR A 702 REMARK 465 PHE A 703 REMARK 465 PRO A 704 REMARK 465 GLU A 705 REMARK 465 GLU A 706 REMARK 465 ILE A 707 REMARK 465 ALA A 708 REMARK 465 LYS A 709 REMARK 465 LEU A 710 REMARK 465 ARG A 711 REMARK 465 ARG A 712 REMARK 465 ASP A 713 REMARK 465 VAL A 714 REMARK 465 ASP A 715 REMARK 465 ASN A 716 REMARK 465 GLY A 717 REMARK 465 LEU A 718 REMARK 465 SER A 719 REMARK 465 LEU A 720 REMARK 465 VAL A 721 REMARK 465 ILE A 722 REMARK 465 PHE A 723 REMARK 465 SER A 724 REMARK 465 ASP A 725 REMARK 465 TRP A 726 REMARK 465 TYR A 727 REMARK 465 ASN A 728 REMARK 465 THR A 729 REMARK 465 SER A 730 REMARK 465 VAL A 731 REMARK 465 MET A 732 REMARK 465 ARG A 733 REMARK 465 LYS A 734 REMARK 465 VAL A 735 REMARK 465 LYS A 736 REMARK 465 PHE A 737 REMARK 465 TYR A 738 REMARK 465 ASP A 739 REMARK 465 GLU A 740 REMARK 465 ASN A 741 REMARK 465 THR A 742 REMARK 465 ARG A 743 REMARK 465 GLN A 744 REMARK 465 TRP A 745 REMARK 465 TRP A 746 REMARK 465 MET A 747 REMARK 465 PRO A 748 REMARK 465 ASP A 749 REMARK 465 THR A 750 REMARK 465 GLY A 751 REMARK 465 GLY A 752 REMARK 465 ALA A 753 REMARK 465 ASN A 754 REMARK 465 ILE A 755 REMARK 465 PRO A 756 REMARK 465 ALA A 757 REMARK 465 LEU A 758 REMARK 465 ASN A 759 REMARK 465 GLU A 760 REMARK 465 LEU A 761 REMARK 465 LEU A 762 REMARK 465 SER A 763 REMARK 465 VAL A 764 REMARK 465 TRP A 765 REMARK 465 ASN A 766 REMARK 465 MET A 767 REMARK 465 GLY A 768 REMARK 465 PHE A 769 REMARK 465 SER A 770 REMARK 465 ASP A 771 REMARK 465 GLY A 772 REMARK 465 LEU A 773 REMARK 465 TYR A 774 REMARK 465 GLU A 775 REMARK 465 GLY A 776 REMARK 465 GLU A 777 REMARK 465 PHE A 778 REMARK 465 THR A 779 REMARK 465 LEU A 780 REMARK 465 ALA A 781 REMARK 465 ASN A 782 REMARK 465 HIS A 783 REMARK 465 ASP A 784 REMARK 465 MET A 785 REMARK 465 TYR A 786 REMARK 465 TYR A 787 REMARK 465 ALA A 788 REMARK 465 SER A 789 REMARK 465 GLY A 790 REMARK 465 CYS A 791 REMARK 465 SER A 792 REMARK 465 ILE A 793 REMARK 465 ALA A 794 REMARK 465 LYS A 795 REMARK 465 PHE A 796 REMARK 465 PRO A 797 REMARK 465 GLU A 798 REMARK 465 ASP A 799 REMARK 465 GLY A 800 REMARK 465 VAL A 801 REMARK 465 VAL A 802 REMARK 465 ILE A 803 REMARK 465 THR A 804 REMARK 465 GLN A 805 REMARK 465 THR A 806 REMARK 465 PHE A 807 REMARK 465 LYS A 808 REMARK 465 ASP A 809 REMARK 465 GLN A 810 REMARK 465 GLY A 811 REMARK 465 LEU A 812 REMARK 465 GLU A 813 REMARK 465 VAL A 814 REMARK 465 LEU A 815 REMARK 465 LYS A 816 REMARK 465 GLN A 817 REMARK 465 GLU A 818 REMARK 465 THR A 819 REMARK 465 ALA A 820 REMARK 465 VAL A 821 REMARK 465 VAL A 822 REMARK 465 GLU A 823 REMARK 465 ASN A 824 REMARK 465 VAL A 825 REMARK 465 PRO A 826 REMARK 465 ILE A 827 REMARK 465 LEU A 828 REMARK 465 GLY A 829 REMARK 465 LEU A 830 REMARK 465 TYR A 831 REMARK 465 GLN A 832 REMARK 465 ILE A 833 REMARK 465 PRO A 834 REMARK 465 ALA A 835 REMARK 465 GLU A 836 REMARK 465 GLY A 837 REMARK 465 GLY A 838 REMARK 465 GLY A 839 REMARK 465 ARG A 840 REMARK 465 ILE A 841 REMARK 465 VAL A 842 REMARK 465 LEU A 843 REMARK 465 TYR A 844 REMARK 465 GLY A 845 REMARK 465 ASP A 846 REMARK 465 SER A 847 REMARK 465 ASN A 848 REMARK 465 CYS A 849 REMARK 465 LEU A 850 REMARK 465 ASP A 851 REMARK 465 ASP A 852 REMARK 465 SER A 853 REMARK 465 HIS A 854 REMARK 465 ARG A 855 REMARK 465 GLN A 856 REMARK 465 LYS A 857 REMARK 465 ASP A 858 REMARK 465 CYS A 859 REMARK 465 PHE A 860 REMARK 465 TRP A 861 REMARK 465 LEU A 862 REMARK 465 LEU A 863 REMARK 465 ASP A 864 REMARK 465 ALA A 865 REMARK 465 LEU A 866 REMARK 465 LEU A 867 REMARK 465 GLN A 868 REMARK 465 TYR A 869 REMARK 465 THR A 870 REMARK 465 SER A 871 REMARK 465 TYR A 872 REMARK 465 GLY A 873 REMARK 465 VAL A 874 REMARK 465 THR A 875 REMARK 465 PRO A 876 REMARK 465 PRO A 877 REMARK 465 SER A 878 REMARK 465 LEU A 879 REMARK 465 SER A 880 REMARK 465 HIS A 881 REMARK 465 SER A 882 REMARK 465 GLY A 883 REMARK 465 ASN A 884 REMARK 465 ARG A 885 REMARK 465 GLN A 886 REMARK 465 ARG A 887 REMARK 465 PRO A 888 REMARK 465 PRO A 889 REMARK 465 SER A 890 REMARK 465 GLY A 891 REMARK 465 ALA A 892 REMARK 465 GLY A 893 REMARK 465 SER A 894 REMARK 465 VAL A 895 REMARK 465 THR A 896 REMARK 465 PRO A 897 REMARK 465 GLU A 898 REMARK 465 ARG A 899 REMARK 465 MET A 900 REMARK 465 GLU A 901 REMARK 465 GLY A 902 REMARK 465 ASN A 903 REMARK 465 HIS A 904 REMARK 465 LEU A 905 REMARK 465 HIS A 906 REMARK 465 ARG A 907 REMARK 465 TYR A 908 REMARK 465 SER A 909 REMARK 465 LYS A 910 REMARK 465 VAL A 911 REMARK 465 LEU A 912 REMARK 465 GLU A 913 REMARK 465 ALA A 914 REMARK 465 HIS A 915 REMARK 465 LEU A 916 REMARK 465 GLY A 917 REMARK 465 ASP A 918 REMARK 465 PRO A 919 REMARK 465 LYS A 920 REMARK 465 PRO A 921 REMARK 465 ARG A 922 REMARK 465 PRO A 923 REMARK 465 LEU A 924 REMARK 465 PRO A 925 REMARK 465 ALA A 926 REMARK 465 CYS A 927 REMARK 465 PRO A 928 REMARK 465 ARG A 929 REMARK 465 LEU A 930 REMARK 465 SER A 931 REMARK 465 TRP A 932 REMARK 465 ALA A 933 REMARK 465 LYS A 934 REMARK 465 PRO A 935 REMARK 465 GLN A 936 REMARK 465 PRO A 937 REMARK 465 LEU A 938 REMARK 465 ASN A 939 REMARK 465 GLU A 940 REMARK 465 THR A 941 REMARK 465 ALA A 942 REMARK 465 PRO A 943 REMARK 465 SER A 944 REMARK 465 ASN A 945 REMARK 465 LEU A 946 REMARK 465 TRP A 947 REMARK 465 LYS A 948 REMARK 465 HIS A 949 REMARK 465 GLN A 950 REMARK 465 LYS A 951 REMARK 465 LEU A 952 REMARK 465 LEU A 953 REMARK 465 SER A 954 REMARK 465 ILE A 955 REMARK 465 ASP A 956 REMARK 465 LEU A 957 REMARK 465 ASP A 958 REMARK 465 LYS A 959 REMARK 465 VAL A 960 REMARK 465 VAL A 961 REMARK 465 LEU A 962 REMARK 465 PRO A 963 REMARK 465 ASN A 964 REMARK 465 PHE A 965 REMARK 465 ARG A 966 REMARK 465 SER A 967 REMARK 465 ASN A 968 REMARK 465 ARG A 969 REMARK 465 PRO A 970 REMARK 465 GLN A 971 REMARK 465 VAL A 972 REMARK 465 ARG A 973 REMARK 465 PRO A 974 REMARK 465 LEU A 975 REMARK 465 SER A 976 REMARK 465 PRO A 977 REMARK 465 GLY A 978 REMARK 465 GLU A 979 REMARK 465 SER A 980 REMARK 465 GLY A 981 REMARK 465 ALA A 982 REMARK 465 TRP A 983 REMARK 465 ASP A 984 REMARK 465 ILE A 985 REMARK 465 PRO A 986 REMARK 465 GLY A 987 REMARK 465 GLY A 988 REMARK 465 ILE A 989 REMARK 465 MET A 990 REMARK 465 PRO A 991 REMARK 465 GLY A 992 REMARK 465 ARG A 993 REMARK 465 TYR A 994 REMARK 465 ASN A 995 REMARK 465 GLN A 996 REMARK 465 GLU A 997 REMARK 465 VAL A 998 REMARK 465 HIS A 999 REMARK 465 HIS A 1000 REMARK 465 HIS A 1001 REMARK 465 HIS A 1002 REMARK 465 HIS A 1003 REMARK 465 HIS A 1004 REMARK 465 HIS A 1005 REMARK 465 HIS A 1006 REMARK 465 HIS A 1007 REMARK 465 HIS A 1008 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE2 HIS A 225 O GLY A 402 1.45 REMARK 500 HH12 ARG A 134 OD1 ASP A 218 1.48 REMARK 500 O GLY A 526 H LEU A 555 1.55 REMARK 500 OD2 ASP A 467 H ARG A 470 1.56 REMARK 500 O ALA A 194 H ALA A 199 1.58 REMARK 500 H GLU A 546 O SER A 567 1.59 REMARK 500 O LEU A 427 OG1 THR A 430 1.91 REMARK 500 NH1 ARG A 234 OD1 ASP A 244 1.98 REMARK 500 O ILE A 87 O HOH A 1201 2.11 REMARK 500 O TYR A 507 OG1 THR A 616 2.15 REMARK 500 O PHE A 228 O HOH A 1202 2.18 REMARK 500 OE1 GLU A 240 NH1 ARG A 276 2.18 REMARK 500 O ALA A 270 O HOH A 1203 2.18 REMARK 500 O SER A 401 NH2 ARG A 408 2.18 REMARK 500 O PHE A 549 O HOH A 1204 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 54 -4.31 73.12 REMARK 500 ASP A 218 -157.85 -152.43 REMARK 500 SER A 222 153.16 -48.67 REMARK 500 SER A 259 164.93 177.59 REMARK 500 MET A 260 34.18 -147.04 REMARK 500 GLN A 282 30.82 71.02 REMARK 500 ASN A 329 39.73 73.27 REMARK 500 GLU A 460 -32.34 -130.11 REMARK 500 ASP A 543 2.22 -68.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-42639 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-42661 RELATED DB: EMDB REMARK 900 SITE-ONE PROTEASE WITHOUT SPRING DBREF 8UWC A 24 998 UNP Q14703 MBTP1_HUMAN 24 998 SEQADV 8UWC MET A -5 UNP Q14703 INITIATING METHIONINE SEQADV 8UWC GLU A -4 UNP Q14703 EXPRESSION TAG SEQADV 8UWC THR A -3 UNP Q14703 EXPRESSION TAG SEQADV 8UWC ASP A -2 UNP Q14703 EXPRESSION TAG SEQADV 8UWC THR A -1 UNP Q14703 EXPRESSION TAG SEQADV 8UWC LEU A 0 UNP Q14703 EXPRESSION TAG SEQADV 8UWC LEU A 1 UNP Q14703 EXPRESSION TAG SEQADV 8UWC LEU A 2 UNP Q14703 EXPRESSION TAG SEQADV 8UWC TRP A 3 UNP Q14703 EXPRESSION TAG SEQADV 8UWC VAL A 4 UNP Q14703 EXPRESSION TAG SEQADV 8UWC LEU A 5 UNP Q14703 EXPRESSION TAG SEQADV 8UWC LEU A 6 UNP Q14703 EXPRESSION TAG SEQADV 8UWC LEU A 7 UNP Q14703 EXPRESSION TAG SEQADV 8UWC TRP A 8 UNP Q14703 EXPRESSION TAG SEQADV 8UWC VAL A 9 UNP Q14703 EXPRESSION TAG SEQADV 8UWC PRO A 10 UNP Q14703 EXPRESSION TAG SEQADV 8UWC GLY A 11 UNP Q14703 EXPRESSION TAG SEQADV 8UWC SER A 12 UNP Q14703 EXPRESSION TAG SEQADV 8UWC THR A 13 UNP Q14703 EXPRESSION TAG SEQADV 8UWC GLY A 14 UNP Q14703 EXPRESSION TAG SEQADV 8UWC ASP A 15 UNP Q14703 EXPRESSION TAG SEQADV 8UWC TYR A 16 UNP Q14703 EXPRESSION TAG SEQADV 8UWC LYS A 17 UNP Q14703 EXPRESSION TAG SEQADV 8UWC ASP A 18 UNP Q14703 EXPRESSION TAG SEQADV 8UWC ASP A 19 UNP Q14703 EXPRESSION TAG SEQADV 8UWC ASP A 20 UNP Q14703 EXPRESSION TAG SEQADV 8UWC ASP A 21 UNP Q14703 EXPRESSION TAG SEQADV 8UWC LYS A 22 UNP Q14703 EXPRESSION TAG SEQADV 8UWC ASP A 23 UNP Q14703 EXPRESSION TAG SEQADV 8UWC HIS A 999 UNP Q14703 EXPRESSION TAG SEQADV 8UWC HIS A 1000 UNP Q14703 EXPRESSION TAG SEQADV 8UWC HIS A 1001 UNP Q14703 EXPRESSION TAG SEQADV 8UWC HIS A 1002 UNP Q14703 EXPRESSION TAG SEQADV 8UWC HIS A 1003 UNP Q14703 EXPRESSION TAG SEQADV 8UWC HIS A 1004 UNP Q14703 EXPRESSION TAG SEQADV 8UWC HIS A 1005 UNP Q14703 EXPRESSION TAG SEQADV 8UWC HIS A 1006 UNP Q14703 EXPRESSION TAG SEQADV 8UWC HIS A 1007 UNP Q14703 EXPRESSION TAG SEQADV 8UWC HIS A 1008 UNP Q14703 EXPRESSION TAG SEQRES 1 A 1014 MET GLU THR ASP THR LEU LEU LEU TRP VAL LEU LEU LEU SEQRES 2 A 1014 TRP VAL PRO GLY SER THR GLY ASP TYR LYS ASP ASP ASP SEQRES 3 A 1014 ASP LYS ASP ARG LEU GLU LYS LYS SER PHE GLU LYS ALA SEQRES 4 A 1014 PRO CYS PRO GLY CYS SER HIS LEU THR LEU LYS VAL GLU SEQRES 5 A 1014 PHE SER SER THR VAL VAL GLU TYR GLU TYR ILE VAL ALA SEQRES 6 A 1014 PHE ASN GLY TYR PHE THR ALA LYS ALA ARG ASN SER PHE SEQRES 7 A 1014 ILE SER SER ALA LEU LYS SER SER GLU VAL ASP ASN TRP SEQRES 8 A 1014 ARG ILE ILE PRO ARG ASN ASN PRO SER SER ASP TYR PRO SEQRES 9 A 1014 SER ASP PHE GLU VAL ILE GLN ILE LYS GLU LYS GLN LYS SEQRES 10 A 1014 ALA GLY LEU LEU THR LEU GLU ASP HIS PRO ASN ILE LYS SEQRES 11 A 1014 ARG VAL THR PRO GLN ARG LYS VAL PHE ARG SER LEU LYS SEQRES 12 A 1014 TYR ALA GLU SER ASP PRO THR VAL PRO CYS ASN GLU THR SEQRES 13 A 1014 ARG TRP SER GLN LYS TRP GLN SER SER ARG PRO LEU ARG SEQRES 14 A 1014 ARG ALA SER LEU SER LEU GLY SER GLY PHE TRP HIS ALA SEQRES 15 A 1014 THR GLY ARG HIS SER SER ARG ARG LEU LEU ARG ALA ILE SEQRES 16 A 1014 PRO ARG GLN VAL ALA GLN THR LEU GLN ALA ASP VAL LEU SEQRES 17 A 1014 TRP GLN MET GLY TYR THR GLY ALA ASN VAL ARG VAL ALA SEQRES 18 A 1014 VAL PHE ASP THR GLY LEU SER GLU LYS HIS PRO HIS PHE SEQRES 19 A 1014 LYS ASN VAL LYS GLU ARG THR ASN TRP THR ASN GLU ARG SEQRES 20 A 1014 THR LEU ASP ASP GLY LEU GLY HIS GLY THR PHE VAL ALA SEQRES 21 A 1014 GLY VAL ILE ALA SER MET ARG GLU CYS GLN GLY PHE ALA SEQRES 22 A 1014 PRO ASP ALA GLU LEU HIS ILE PHE ARG VAL PHE THR ASN SEQRES 23 A 1014 ASN GLN VAL SER TYR THR SER TRP PHE LEU ASP ALA PHE SEQRES 24 A 1014 ASN TYR ALA ILE LEU LYS LYS ILE ASP VAL LEU ASN LEU SEQRES 25 A 1014 SER ILE GLY GLY PRO ASP PHE MET ASP HIS PRO PHE VAL SEQRES 26 A 1014 ASP LYS VAL TRP GLU LEU THR ALA ASN ASN VAL ILE MET SEQRES 27 A 1014 VAL SER ALA ILE GLY ASN ASP GLY PRO LEU TYR GLY THR SEQRES 28 A 1014 LEU ASN ASN PRO ALA ASP GLN MET ASP VAL ILE GLY VAL SEQRES 29 A 1014 GLY GLY ILE ASP PHE GLU ASP ASN ILE ALA ARG PHE SER SEQRES 30 A 1014 SER ARG GLY MET THR THR TRP GLU LEU PRO GLY GLY TYR SEQRES 31 A 1014 GLY ARG MET LYS PRO ASP ILE VAL THR TYR GLY ALA GLY SEQRES 32 A 1014 VAL ARG GLY SER GLY VAL LYS GLY GLY CYS ARG ALA LEU SEQRES 33 A 1014 SER GLY THR SER VAL ALA SER PRO VAL VAL ALA GLY ALA SEQRES 34 A 1014 VAL THR LEU LEU VAL SER THR VAL GLN LYS ARG GLU LEU SEQRES 35 A 1014 VAL ASN PRO ALA SER MET LYS GLN ALA LEU ILE ALA SER SEQRES 36 A 1014 ALA ARG ARG LEU PRO GLY VAL ASN MET PHE GLU GLN GLY SEQRES 37 A 1014 HIS GLY LYS LEU ASP LEU LEU ARG ALA TYR GLN ILE LEU SEQRES 38 A 1014 ASN SER TYR LYS PRO GLN ALA SER LEU SER PRO SER TYR SEQRES 39 A 1014 ILE ASP LEU THR GLU CYS PRO TYR MET TRP PRO TYR CYS SEQRES 40 A 1014 SER GLN PRO ILE TYR TYR GLY GLY MET PRO THR VAL VAL SEQRES 41 A 1014 ASN VAL THR ILE LEU ASN GLY MET GLY VAL THR GLY ARG SEQRES 42 A 1014 ILE VAL ASP LYS PRO ASP TRP GLN PRO TYR LEU PRO GLN SEQRES 43 A 1014 ASN GLY ASP ASN ILE GLU VAL ALA PHE SER TYR SER SER SEQRES 44 A 1014 VAL LEU TRP PRO TRP SER GLY TYR LEU ALA ILE SER ILE SEQRES 45 A 1014 SER VAL THR LYS LYS ALA ALA SER TRP GLU GLY ILE ALA SEQRES 46 A 1014 GLN GLY HIS VAL MET ILE THR VAL ALA SER PRO ALA GLU SEQRES 47 A 1014 THR GLU SER LYS ASN GLY ALA GLU GLN THR SER THR VAL SEQRES 48 A 1014 LYS LEU PRO ILE LYS VAL LYS ILE ILE PRO THR PRO PRO SEQRES 49 A 1014 ARG SER LYS ARG VAL LEU TRP ASP GLN TYR HIS ASN LEU SEQRES 50 A 1014 ARG TYR PRO PRO GLY TYR PHE PRO ARG ASP ASN LEU ARG SEQRES 51 A 1014 MET LYS ASN ASP PRO LEU ASP TRP ASN GLY ASP HIS ILE SEQRES 52 A 1014 HIS THR ASN PHE ARG ASP MET TYR GLN HIS LEU ARG SER SEQRES 53 A 1014 MET GLY TYR PHE VAL GLU VAL LEU GLY ALA PRO PHE THR SEQRES 54 A 1014 CYS PHE ASP ALA SER GLN TYR GLY THR LEU LEU MET VAL SEQRES 55 A 1014 ASP SER GLU GLU GLU TYR PHE PRO GLU GLU ILE ALA LYS SEQRES 56 A 1014 LEU ARG ARG ASP VAL ASP ASN GLY LEU SER LEU VAL ILE SEQRES 57 A 1014 PHE SER ASP TRP TYR ASN THR SER VAL MET ARG LYS VAL SEQRES 58 A 1014 LYS PHE TYR ASP GLU ASN THR ARG GLN TRP TRP MET PRO SEQRES 59 A 1014 ASP THR GLY GLY ALA ASN ILE PRO ALA LEU ASN GLU LEU SEQRES 60 A 1014 LEU SER VAL TRP ASN MET GLY PHE SER ASP GLY LEU TYR SEQRES 61 A 1014 GLU GLY GLU PHE THR LEU ALA ASN HIS ASP MET TYR TYR SEQRES 62 A 1014 ALA SER GLY CYS SER ILE ALA LYS PHE PRO GLU ASP GLY SEQRES 63 A 1014 VAL VAL ILE THR GLN THR PHE LYS ASP GLN GLY LEU GLU SEQRES 64 A 1014 VAL LEU LYS GLN GLU THR ALA VAL VAL GLU ASN VAL PRO SEQRES 65 A 1014 ILE LEU GLY LEU TYR GLN ILE PRO ALA GLU GLY GLY GLY SEQRES 66 A 1014 ARG ILE VAL LEU TYR GLY ASP SER ASN CYS LEU ASP ASP SEQRES 67 A 1014 SER HIS ARG GLN LYS ASP CYS PHE TRP LEU LEU ASP ALA SEQRES 68 A 1014 LEU LEU GLN TYR THR SER TYR GLY VAL THR PRO PRO SER SEQRES 69 A 1014 LEU SER HIS SER GLY ASN ARG GLN ARG PRO PRO SER GLY SEQRES 70 A 1014 ALA GLY SER VAL THR PRO GLU ARG MET GLU GLY ASN HIS SEQRES 71 A 1014 LEU HIS ARG TYR SER LYS VAL LEU GLU ALA HIS LEU GLY SEQRES 72 A 1014 ASP PRO LYS PRO ARG PRO LEU PRO ALA CYS PRO ARG LEU SEQRES 73 A 1014 SER TRP ALA LYS PRO GLN PRO LEU ASN GLU THR ALA PRO SEQRES 74 A 1014 SER ASN LEU TRP LYS HIS GLN LYS LEU LEU SER ILE ASP SEQRES 75 A 1014 LEU ASP LYS VAL VAL LEU PRO ASN PHE ARG SER ASN ARG SEQRES 76 A 1014 PRO GLN VAL ARG PRO LEU SER PRO GLY GLU SER GLY ALA SEQRES 77 A 1014 TRP ASP ILE PRO GLY GLY ILE MET PRO GLY ARG TYR ASN SEQRES 78 A 1014 GLN GLU VAL HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS HET NAG A1101 28 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG C8 H15 N O6 FORMUL 3 HOH *97(H2 O) HELIX 1 AA1 THR A 65 SER A 80 1 16 HELIX 2 AA2 LYS A 109 ASP A 119 1 11 HELIX 3 AA3 GLN A 192 LEU A 197 1 6 HELIX 4 AA4 GLN A 198 GLY A 206 1 9 HELIX 5 AA5 GLY A 248 ALA A 258 1 11 HELIX 6 AA6 THR A 286 LYS A 300 1 15 HELIX 7 AA7 ASP A 315 ASN A 328 1 14 HELIX 8 AA8 GLY A 412 VAL A 431 1 20 HELIX 9 AA9 LYS A 433 VAL A 437 5 5 HELIX 10 AB1 ASN A 438 SER A 449 1 12 HELIX 11 AB2 ASN A 457 GLY A 462 1 6 HELIX 12 AB3 ASP A 467 TYR A 478 1 12 HELIX 13 AB4 PRO A 499 GLN A 503 5 5 HELIX 14 AB5 ASN A 541 ASP A 543 5 3 SHEET 1 AA1 2 LYS A 44 GLU A 46 0 SHEET 2 AA1 2 SER A 135 LYS A 137 -1 O LYS A 137 N LYS A 44 SHEET 1 AA2 5 TRP A 85 ILE A 87 0 SHEET 2 AA2 5 VAL A 103 ILE A 106 -1 O GLN A 105 N ARG A 86 SHEET 3 AA2 5 SER A 49 ALA A 59 -1 N TYR A 56 O ILE A 104 SHEET 4 AA2 5 ARG A 125 PHE A 133 -1 O THR A 127 N ILE A 57 SHEET 5 AA2 5 VAL A 283 TYR A 285 -1 O SER A 284 N VAL A 132 SHEET 1 AA3 7 VAL A 231 GLU A 233 0 SHEET 2 AA3 7 GLU A 271 ARG A 276 1 O LEU A 272 N LYS A 232 SHEET 3 AA3 7 ARG A 213 ASP A 218 1 N VAL A 216 O PHE A 275 SHEET 4 AA3 7 VAL A 303 LEU A 306 1 O ASN A 305 N ALA A 215 SHEET 5 AA3 7 ILE A 331 ALA A 335 1 O VAL A 333 N LEU A 304 SHEET 6 AA3 7 ILE A 356 ILE A 361 1 O ILE A 356 N SER A 334 SHEET 7 AA3 7 ILE A 391 TYR A 394 1 O THR A 393 N ILE A 361 SHEET 1 AA4 2 VAL A 398 SER A 401 0 SHEET 2 AA4 2 CYS A 407 LEU A 410 -1 O LEU A 410 N VAL A 398 SHEET 1 AA5 4 ALA A 482 SER A 485 0 SHEET 2 AA5 4 THR A 512 ASN A 520 -1 O LEU A 519 N SER A 483 SHEET 3 AA5 4 SER A 559 VAL A 568 -1 O ILE A 566 N THR A 512 SHEET 4 AA5 4 ILE A 545 SER A 550 -1 N GLU A 546 O SER A 567 SHEET 1 AA6 4 ILE A 489 ASP A 490 0 SHEET 2 AA6 4 GLN A 601 ILE A 613 1 O PRO A 608 N ILE A 489 SHEET 3 AA6 4 GLY A 577 SER A 589 -1 N SER A 589 O GLN A 601 SHEET 4 AA6 4 ASP A 533 PRO A 536 -1 N GLN A 535 O HIS A 582 SHEET 1 AA7 5 ILE A 489 ASP A 490 0 SHEET 2 AA7 5 GLN A 601 ILE A 613 1 O PRO A 608 N ILE A 489 SHEET 3 AA7 5 GLY A 577 SER A 589 -1 N SER A 589 O GLN A 601 SHEET 4 AA7 5 GLY A 526 ILE A 528 -1 N ARG A 527 O ALA A 588 SHEET 5 AA7 5 VAL A 554 LEU A 555 -1 O LEU A 555 N GLY A 526 SSBOND 1 CYS A 263 CYS A 407 1555 1555 2.02 SSBOND 2 CYS A 494 CYS A 501 1555 1555 2.04 LINK ND2 ASN A 515 C1 NAG A1101 1555 1555 1.43 CISPEP 1 LYS A 388 PRO A 389 0 12.03 CISPEP 2 SER A 485 PRO A 486 0 1.13 CISPEP 3 CYS A 494 PRO A 495 0 2.19 CISPEP 4 TRP A 498 PRO A 499 0 -0.12 CISPEP 5 TRP A 556 PRO A 557 0 -9.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000