data_8UYP # _entry.id 8UYP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8UYP pdb_00008uyp 10.2210/pdb8uyp/pdb WWPDB D_1000279181 ? ? EMDB EMD-42816 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-12-20 2 'Structure model' 1 1 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8UYP _pdbx_database_status.recvd_initial_deposition_date 2023-11-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB . EMD-42809 'other EM volume' EMDB . EMD-42810 'other EM volume' EMDB . EMD-42811 'other EM volume' EMDB . EMD-42801 'other EM volume' EMDB . EMD-42805 'other EM volume' EMDB . EMD-42802 'other EM volume' EMDB . EMD-42808 'other EM volume' EMDB . EMD-42803 'other EM volume' EMDB . EMD-42813 'other EM volume' EMDB . EMD-42814 'other EM volume' PDB . 8UYK unspecified PDB . 8UYL unspecified PDB . 8UYM unspecified PDB . 8UYE unspecified PDB . 8UYG unspecified PDB . 8UYJ unspecified EMDB ;SARS-CoV-1 5' proximal stem-loop 5 ; EMD-42816 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 rhiju@stanford.edu Rhiju Das ? 'principal investigator/group leader' 0000-0001-7497-0972 3 wahc@stanford.edu Wah Chiu ? 'principal investigator/group leader' 0000-0002-8910-3078 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kretsch, R.C.' 1 0000-0002-6935-518X 'Xu, L.' 2 0000-0002-1200-8937 'Zheludev, I.N.' 3 0000-0002-9572-0574 'Zhou, X.' 4 0000-0002-0722-7334 'Huang, R.' 5 0009-0009-6136-8013 'Nye, G.' 6 0009-0001-6698-9988 'Li, S.' 7 0000-0002-7041-5960 'Zhang, K.' 8 0000-0003-0414-4776 'Chiu, W.' 9 0000-0002-8910-3078 'Das, R.' 10 0000-0001-7497-0972 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_patent _citation.unpublished_flag ? ? ? ? ? ? ? US ? ? primary Proc.Natl.Acad.Sci.USA PNASA6 0040 1091-6490 ? ? 121 ? e2320493121 e2320493121 ;Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses. ; 2024 ? 10.1073/pnas.2320493121 38427602 ? ? ? ? ? ? ? ? ? US ? ? 1 Biorxiv ? ? 2692-8205 ? ? ? ? ? ? ;Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses. ; 2023 ? 10.1101/2023.11.22.567964 38076883 ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kretsch, R.C.' 1 0000-0002-6935-518X primary 'Xu, L.' 2 0000-0002-1200-8937 primary 'Zheludev, I.N.' 3 ? primary 'Zhou, X.' 4 0000-0002-0722-7334 primary 'Huang, R.' 5 ? primary 'Nye, G.' 6 ? primary 'Li, S.' 7 ? primary 'Zhang, K.' 8 ? primary 'Chiu, W.' 9 0000-0002-8910-3078 primary 'Das, R.' 10 0000-0001-7497-0972 1 'Kretsch, R.C.' 11 0000-0002-6935-518X 1 'Xu, L.' 12 0000-0002-1200-8937 1 'Zheludev, I.N.' 13 0000-0002-9572-0574 1 'Zhou, X.' 14 0000-0002-0722-7334 1 'Huang, R.' 15 0009-0009-6136-8013 1 'Nye, G.' 16 0009-0001-6698-9988 1 'Li, S.' 17 0000-0002-7041-5960 1 'Zhang, K.' 18 0000-0003-0414-4776 1 'Chiu, W.' 19 0000-0002-8910-3078 1 'Das, R.' 20 0000-0001-7497-0972 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;SARS-CoV-1 5' proximal stem-loop 5 ; _entity.formula_weight 45917.074 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGUUGACAAGAAACGAGUAACUCGUCCCUCUUCUGCAGACUGCUUACGGUUUCGUCCGUGUUGCAGUCGAUCAUCAGCAU ACCUAGGUUUCGUCCGGGUGUGACCGAAAGGUAAGAUGGAGAGCCUUGUUCUUGGUGUCAACC ; _entity_poly.pdbx_seq_one_letter_code_can ;GGUUGACAAGAAACGAGUAACUCGUCCCUCUUCUGCAGACUGCUUACGGUUUCGUCCGUGUUGCAGUCGAUCAUCAGCAU ACCUAGGUUUCGUCCGGGUGUGACCGAAAGGUAAGAUGGAGAGCCUUGUUCUUGGUGUCAACC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 U n 1 4 U n 1 5 G n 1 6 A n 1 7 C n 1 8 A n 1 9 A n 1 10 G n 1 11 A n 1 12 A n 1 13 A n 1 14 C n 1 15 G n 1 16 A n 1 17 G n 1 18 U n 1 19 A n 1 20 A n 1 21 C n 1 22 U n 1 23 C n 1 24 G n 1 25 U n 1 26 C n 1 27 C n 1 28 C n 1 29 U n 1 30 C n 1 31 U n 1 32 U n 1 33 C n 1 34 U n 1 35 G n 1 36 C n 1 37 A n 1 38 G n 1 39 A n 1 40 C n 1 41 U n 1 42 G n 1 43 C n 1 44 U n 1 45 U n 1 46 A n 1 47 C n 1 48 G n 1 49 G n 1 50 U n 1 51 U n 1 52 U n 1 53 C n 1 54 G n 1 55 U n 1 56 C n 1 57 C n 1 58 G n 1 59 U n 1 60 G n 1 61 U n 1 62 U n 1 63 G n 1 64 C n 1 65 A n 1 66 G n 1 67 U n 1 68 C n 1 69 G n 1 70 A n 1 71 U n 1 72 C n 1 73 A n 1 74 U n 1 75 C n 1 76 A n 1 77 G n 1 78 C n 1 79 A n 1 80 U n 1 81 A n 1 82 C n 1 83 C n 1 84 U n 1 85 A n 1 86 G n 1 87 G n 1 88 U n 1 89 U n 1 90 U n 1 91 C n 1 92 G n 1 93 U n 1 94 C n 1 95 C n 1 96 G n 1 97 G n 1 98 G n 1 99 U n 1 100 G n 1 101 U n 1 102 G n 1 103 A n 1 104 C n 1 105 C n 1 106 G n 1 107 A n 1 108 A n 1 109 A n 1 110 G n 1 111 G n 1 112 U n 1 113 A n 1 114 A n 1 115 G n 1 116 A n 1 117 U n 1 118 G n 1 119 G n 1 120 A n 1 121 G n 1 122 A n 1 123 G n 1 124 C n 1 125 C n 1 126 U n 1 127 U n 1 128 G n 1 129 U n 1 130 U n 1 131 C n 1 132 U n 1 133 U n 1 134 G n 1 135 G n 1 136 U n 1 137 G n 1 138 U n 1 139 C n 1 140 A n 1 141 A n 1 142 C n 1 143 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 143 _pdbx_entity_src_syn.organism_scientific 'SARS coronavirus Tor2' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 227984 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 150 150 G G A . n A 1 2 G 2 151 151 G G A . n A 1 3 U 3 152 152 U U A . n A 1 4 U 4 153 153 U U A . n A 1 5 G 5 154 154 G G A . n A 1 6 A 6 155 155 A A A . n A 1 7 C 7 156 156 C C A . n A 1 8 A 8 157 157 A A A . n A 1 9 A 9 158 158 A A A . n A 1 10 G 10 159 159 G G A . n A 1 11 A 11 160 160 A A A . n A 1 12 A 12 161 161 A A A . n A 1 13 A 13 162 162 A A A . n A 1 14 C 14 163 163 C C A . n A 1 15 G 15 164 164 G G A . n A 1 16 A 16 165 165 A A A . n A 1 17 G 17 166 166 G G A . n A 1 18 U 18 167 167 U U A . n A 1 19 A 19 168 168 A A A . n A 1 20 A 20 169 169 A A A . n A 1 21 C 21 170 170 C C A . n A 1 22 U 22 171 171 U U A . n A 1 23 C 23 172 172 C C A . n A 1 24 G 24 173 173 G G A . n A 1 25 U 25 174 174 U U A . n A 1 26 C 26 175 175 C C A . n A 1 27 C 27 176 176 C C A . n A 1 28 C 28 177 177 C C A . n A 1 29 U 29 178 178 U U A . n A 1 30 C 30 179 179 C C A . n A 1 31 U 31 180 180 U U A . n A 1 32 U 32 181 181 U U A . n A 1 33 C 33 182 182 C C A . n A 1 34 U 34 183 183 U U A . n A 1 35 G 35 184 184 G G A . n A 1 36 C 36 185 185 C C A . n A 1 37 A 37 186 186 A A A . n A 1 38 G 38 187 187 G G A . n A 1 39 A 39 188 188 A A A . n A 1 40 C 40 189 189 C C A . n A 1 41 U 41 190 190 U U A . n A 1 42 G 42 191 191 G G A . n A 1 43 C 43 192 192 C C A . n A 1 44 U 44 193 193 U U A . n A 1 45 U 45 194 194 U U A . n A 1 46 A 46 195 195 A A A . n A 1 47 C 47 196 196 C C A . n A 1 48 G 48 197 197 G G A . n A 1 49 G 49 198 198 G G A . n A 1 50 U 50 199 199 U U A . n A 1 51 U 51 200 200 U U A . n A 1 52 U 52 201 201 U U A . n A 1 53 C 53 202 202 C C A . n A 1 54 G 54 203 203 G G A . n A 1 55 U 55 204 204 U U A . n A 1 56 C 56 205 205 C C A . n A 1 57 C 57 206 206 C C A . n A 1 58 G 58 207 207 G G A . n A 1 59 U 59 208 208 U U A . n A 1 60 G 60 209 209 G G A . n A 1 61 U 61 210 210 U U A . n A 1 62 U 62 211 211 U U A . n A 1 63 G 63 212 212 G G A . n A 1 64 C 64 213 213 C C A . n A 1 65 A 65 214 214 A A A . n A 1 66 G 66 215 215 G G A . n A 1 67 U 67 216 216 U U A . n A 1 68 C 68 217 217 C C A . n A 1 69 G 69 218 218 G G A . n A 1 70 A 70 219 219 A A A . n A 1 71 U 71 220 220 U U A . n A 1 72 C 72 221 221 C C A . n A 1 73 A 73 222 222 A A A . n A 1 74 U 74 223 223 U U A . n A 1 75 C 75 224 224 C C A . n A 1 76 A 76 225 225 A A A . n A 1 77 G 77 226 226 G G A . n A 1 78 C 78 227 227 C C A . n A 1 79 A 79 228 228 A A A . n A 1 80 U 80 229 229 U U A . n A 1 81 A 81 230 230 A A A . n A 1 82 C 82 231 231 C C A . n A 1 83 C 83 232 232 C C A . n A 1 84 U 84 233 233 U U A . n A 1 85 A 85 234 234 A A A . n A 1 86 G 86 235 235 G G A . n A 1 87 G 87 236 236 G G A . n A 1 88 U 88 237 237 U U A . n A 1 89 U 89 238 238 U U A . n A 1 90 U 90 239 239 U U A . n A 1 91 C 91 240 240 C C A . n A 1 92 G 92 241 241 G G A . n A 1 93 U 93 242 242 U U A . n A 1 94 C 94 243 243 C C A . n A 1 95 C 95 244 244 C C A . n A 1 96 G 96 245 245 G G A . n A 1 97 G 97 246 246 G G A . n A 1 98 G 98 247 247 G G A . n A 1 99 U 99 248 248 U U A . n A 1 100 G 100 249 249 G G A . n A 1 101 U 101 250 250 U U A . n A 1 102 G 102 251 251 G G A . n A 1 103 A 103 252 252 A A A . n A 1 104 C 104 253 253 C C A . n A 1 105 C 105 254 254 C C A . n A 1 106 G 106 255 255 G G A . n A 1 107 A 107 256 256 A A A . n A 1 108 A 108 257 257 A A A . n A 1 109 A 109 258 258 A A A . n A 1 110 G 110 259 259 G G A . n A 1 111 G 111 260 260 G G A . n A 1 112 U 112 261 261 U U A . n A 1 113 A 113 262 262 A A A . n A 1 114 A 114 263 263 A A A . n A 1 115 G 115 264 264 G G A . n A 1 116 A 116 265 265 A A A . n A 1 117 U 117 266 266 U U A . n A 1 118 G 118 267 267 G G A . n A 1 119 G 119 268 268 G G A . n A 1 120 A 120 269 269 A A A . n A 1 121 G 121 270 270 G G A . n A 1 122 A 122 271 271 A A A . n A 1 123 G 123 272 272 G G A . n A 1 124 C 124 273 273 C C A . n A 1 125 C 125 274 274 C C A . n A 1 126 U 126 275 275 U U A . n A 1 127 U 127 276 276 U U A . n A 1 128 G 128 277 277 G G A . n A 1 129 U 129 278 278 U U A . n A 1 130 U 130 279 279 U U A . n A 1 131 C 131 280 280 C C A . n A 1 132 U 132 281 281 U U A . n A 1 133 U 133 282 282 U U A . n A 1 134 G 134 283 283 G G A . n A 1 135 G 135 284 284 G G A . n A 1 136 U 136 285 285 U U A . n A 1 137 G 137 286 286 G G A . n A 1 138 U 138 287 287 U U A . n A 1 139 C 139 288 288 C C A . n A 1 140 A 140 289 289 A A A . n A 1 141 A 141 290 290 A A A . n A 1 142 C 142 291 291 C C A . n A 1 143 C 143 292 292 C C A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8UYP _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8UYP _struct.title ;SARS-CoV-1 5' proximal stem-loop 5 ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8UYP _struct_keywords.text ;SL5, coronavirus, 5' UTR, RNA ; _struct_keywords.pdbx_keywords RNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code NC_004718.3 _struct_ref.pdbx_db_accession NC_004718.3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;CGUUGACAAGAAACGAGUAACUCGUCCCUCUUCUGCAGACUGCUUACGGUUUCGUCCGUGUUGCAGUCGAUCAUCAGCAU ACCUAGGUUUCGUCCGGGUGUGACCGAAAGGUAAGAUGGAGAGCCUUGUUCUUGGUGUCAACG ; _struct_ref.pdbx_align_begin 150 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8UYP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 143 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession NC_004718.3 _struct_ref_seq.db_align_beg 150 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 292 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 150 _struct_ref_seq.pdbx_auth_seq_align_end 292 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8UYP G A 1 ? GB NC_004718.3 C 150 conflict 150 1 1 8UYP C A 143 ? GB NC_004718.3 G 292 conflict 292 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 143 N3 ? ? A G 150 A C 292 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 143 O2 ? ? A G 150 A C 292 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 143 N4 ? ? A G 150 A C 292 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 142 N3 ? ? A G 151 A C 291 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 142 O2 ? ? A G 151 A C 291 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 142 N4 ? ? A G 151 A C 291 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 N3 ? ? ? 1_555 A A 141 N1 ? ? A U 152 A A 290 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 3 O4 ? ? ? 1_555 A A 141 N6 ? ? A U 152 A A 290 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 140 N1 ? ? A U 153 A A 289 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 140 N6 ? ? A U 153 A A 289 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 139 N3 ? ? A G 154 A C 288 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 139 O2 ? ? A G 154 A C 288 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 139 N4 ? ? A G 154 A C 288 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 138 N3 ? ? A A 155 A U 287 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 138 O4 ? ? A A 155 A U 287 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 134 N1 ? ? A C 156 A G 283 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 134 O6 ? ? A C 156 A G 283 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 134 N2 ? ? A C 156 A G 283 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 8 N1 ? ? ? 1_555 A U 133 N3 ? ? A A 157 A U 282 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A A 8 N6 ? ? ? 1_555 A U 133 O4 ? ? A A 157 A U 282 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A A 9 N1 ? ? ? 1_555 A U 132 N3 ? ? A A 158 A U 281 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A A 9 N6 ? ? ? 1_555 A U 132 O4 ? ? A A 158 A U 281 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 131 N3 ? ? A G 159 A C 280 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 131 O2 ? ? A G 159 A C 280 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 131 N4 ? ? A G 159 A C 280 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 11 N1 ? ? ? 1_555 A U 130 N3 ? ? A A 160 A U 279 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A A 11 N6 ? ? ? 1_555 A U 130 O4 ? ? A A 160 A U 279 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A A 13 N1 ? ? ? 1_555 A U 129 N3 ? ? A A 162 A U 278 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A A 13 N6 ? ? ? 1_555 A U 129 O4 ? ? A A 162 A U 278 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 128 N1 ? ? A C 163 A G 277 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 128 O6 ? ? A C 163 A G 277 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 128 N2 ? ? A C 163 A G 277 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 15 N1 ? ? ? 1_555 A U 127 O2 ? ? A G 164 A U 276 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog34 hydrog ? ? A G 15 O6 ? ? ? 1_555 A U 127 N3 ? ? A G 164 A U 276 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog35 hydrog ? ? A A 16 N1 ? ? ? 1_555 A U 126 N3 ? ? A A 165 A U 275 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A A 16 N6 ? ? ? 1_555 A U 126 O4 ? ? A A 165 A U 275 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 125 N3 ? ? A G 166 A C 274 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 125 O2 ? ? A G 166 A C 274 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 125 N4 ? ? A G 166 A C 274 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A A 20 N6 ? ? ? 1_555 A C 124 N3 ? ? A A 169 A C 273 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog41 hydrog ? ? A C 21 N3 ? ? ? 1_555 A G 123 N1 ? ? A C 170 A G 272 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 21 N4 ? ? ? 1_555 A G 123 O6 ? ? A C 170 A G 272 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 21 O2 ? ? ? 1_555 A G 123 N2 ? ? A C 170 A G 272 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A U 22 N3 ? ? ? 1_555 A A 122 N1 ? ? A U 171 A A 271 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A U 22 O4 ? ? ? 1_555 A A 122 N6 ? ? A U 171 A A 271 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 23 N3 ? ? ? 1_555 A G 121 N1 ? ? A C 172 A G 270 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 23 N4 ? ? ? 1_555 A G 121 O6 ? ? A C 172 A G 270 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 23 O2 ? ? ? 1_555 A G 121 N2 ? ? A C 172 A G 270 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A U 25 N3 ? ? ? 1_555 A A 120 N1 ? ? A U 174 A A 269 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A U 25 O4 ? ? ? 1_555 A A 120 N6 ? ? A U 174 A A 269 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 26 N3 ? ? ? 1_555 A G 119 N1 ? ? A C 175 A G 268 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A C 26 N4 ? ? ? 1_555 A G 119 O6 ? ? A C 175 A G 268 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A C 26 O2 ? ? ? 1_555 A G 119 N2 ? ? A C 175 A G 268 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A C 27 N3 ? ? ? 1_555 A G 118 N1 ? ? A C 176 A G 267 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A C 27 N4 ? ? ? 1_555 A G 118 O6 ? ? A C 176 A G 267 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A C 27 O2 ? ? ? 1_555 A G 118 N2 ? ? A C 176 A G 267 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A C 28 N4 ? ? ? 1_555 A U 117 O4 ? ? A C 177 A U 266 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog58 hydrog ? ? A U 29 N3 ? ? ? 1_555 A A 116 N1 ? ? A U 178 A A 265 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A U 29 O4 ? ? ? 1_555 A A 116 N6 ? ? A U 178 A A 265 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 30 N3 ? ? ? 1_555 A G 115 N1 ? ? A C 179 A G 264 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 30 N4 ? ? ? 1_555 A G 115 O6 ? ? A C 179 A G 264 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 30 O2 ? ? ? 1_555 A G 115 N2 ? ? A C 179 A G 264 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A U 31 N3 ? ? ? 1_555 A A 114 N1 ? ? A U 180 A A 263 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A U 31 O4 ? ? ? 1_555 A A 114 N6 ? ? A U 180 A A 263 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A U 32 N3 ? ? ? 1_555 A A 113 N1 ? ? A U 181 A A 262 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A U 32 O4 ? ? ? 1_555 A A 113 N6 ? ? A U 181 A A 262 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 33 N3 ? ? ? 1_555 A G 77 N1 ? ? A C 182 A G 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 33 N4 ? ? ? 1_555 A G 77 O6 ? ? A C 182 A G 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 33 O2 ? ? ? 1_555 A G 77 N2 ? ? A C 182 A G 226 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A U 34 N3 ? ? ? 1_555 A A 76 N1 ? ? A U 183 A A 225 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A U 34 O4 ? ? ? 1_555 A A 76 N6 ? ? A U 183 A A 225 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 35 N1 ? ? ? 1_555 A C 75 N3 ? ? A G 184 A C 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 35 N2 ? ? ? 1_555 A C 75 O2 ? ? A G 184 A C 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 35 O6 ? ? ? 1_555 A C 75 N4 ? ? A G 184 A C 224 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A A 37 N1 ? ? ? 1_555 A U 74 N3 ? ? A A 186 A U 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A A 37 N6 ? ? ? 1_555 A U 74 O4 ? ? A A 186 A U 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 38 N1 ? ? ? 1_555 A C 68 N3 ? ? A G 187 A C 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A G 38 N2 ? ? ? 1_555 A C 68 O2 ? ? A G 187 A C 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A G 38 O6 ? ? ? 1_555 A C 68 N4 ? ? A G 187 A C 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A A 39 N1 ? ? ? 1_555 A U 67 N3 ? ? A A 188 A U 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A A 39 N6 ? ? ? 1_555 A U 67 O4 ? ? A A 188 A U 216 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A C 40 N3 ? ? ? 1_555 A G 66 N1 ? ? A C 189 A G 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A C 40 N4 ? ? ? 1_555 A G 66 O6 ? ? A C 189 A G 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A C 40 O2 ? ? ? 1_555 A G 66 N2 ? ? A C 189 A G 215 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A U 41 N3 ? ? ? 1_555 A A 65 N1 ? ? A U 190 A A 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A U 41 O4 ? ? ? 1_555 A A 65 N6 ? ? A U 190 A A 214 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A G 42 N1 ? ? ? 1_555 A C 64 N3 ? ? A G 191 A C 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A G 42 N2 ? ? ? 1_555 A C 64 O2 ? ? A G 191 A C 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A G 42 O6 ? ? ? 1_555 A C 64 N4 ? ? A G 191 A C 213 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A C 43 N3 ? ? ? 1_555 A G 63 N1 ? ? A C 192 A G 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A C 43 N4 ? ? ? 1_555 A G 63 O6 ? ? A C 192 A G 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A C 43 O2 ? ? ? 1_555 A G 63 N2 ? ? A C 192 A G 212 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A U 44 N3 ? ? ? 1_555 A U 62 O4 ? ? A U 193 A U 211 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog94 hydrog ? ? A U 44 O2 ? ? ? 1_555 A U 62 N3 ? ? A U 193 A U 211 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog95 hydrog ? ? A U 45 N3 ? ? ? 1_555 A G 60 O6 ? ? A U 194 A G 209 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog96 hydrog ? ? A U 45 O2 ? ? ? 1_555 A G 60 N1 ? ? A U 194 A G 209 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog97 hydrog ? ? A U 45 N3 ? ? ? 1_555 A U 61 O4 ? ? A U 194 A U 210 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog98 hydrog ? ? A U 45 O2 ? ? ? 1_555 A U 61 N3 ? ? A U 194 A U 210 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog99 hydrog ? ? A A 46 N1 ? ? ? 1_555 A U 59 N3 ? ? A A 195 A U 208 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A A 46 N6 ? ? ? 1_555 A U 59 O4 ? ? A A 195 A U 208 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A C 47 N3 ? ? ? 1_555 A G 58 N1 ? ? A C 196 A G 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A C 47 N4 ? ? ? 1_555 A G 58 O6 ? ? A C 196 A G 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A C 47 O2 ? ? ? 1_555 A G 58 N2 ? ? A C 196 A G 207 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A G 48 N1 ? ? ? 1_555 A C 57 N3 ? ? A G 197 A C 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A G 48 N2 ? ? ? 1_555 A C 57 O2 ? ? A G 197 A C 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A G 48 O6 ? ? ? 1_555 A C 57 N4 ? ? A G 197 A C 206 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A G 49 N1 ? ? ? 1_555 A C 56 N3 ? ? A G 198 A C 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A G 49 N2 ? ? ? 1_555 A C 56 O2 ? ? A G 198 A C 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A G 49 O6 ? ? ? 1_555 A C 56 N4 ? ? A G 198 A C 205 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A U 50 N3 ? ? ? 1_555 A U 55 O4 ? ? A U 199 A U 204 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog111 hydrog ? ? A G 69 N2 ? ? ? 1_555 A A 73 N1 ? ? A G 218 A A 222 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog112 hydrog ? ? A G 69 N3 ? ? ? 1_555 A A 73 N6 ? ? A G 218 A A 222 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog113 hydrog ? ? A C 78 N3 ? ? ? 1_555 A G 102 N1 ? ? A C 227 A G 251 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A C 78 N4 ? ? ? 1_555 A G 102 O6 ? ? A C 227 A G 251 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A C 78 O2 ? ? ? 1_555 A G 102 N2 ? ? A C 227 A G 251 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A A 79 N1 ? ? ? 1_555 A U 101 N3 ? ? A A 228 A U 250 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A A 79 N6 ? ? ? 1_555 A U 101 O4 ? ? A A 228 A U 250 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? A U 80 N3 ? ? ? 1_555 A G 100 O6 ? ? A U 229 A G 249 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog119 hydrog ? ? A U 80 O2 ? ? ? 1_555 A G 100 N1 ? ? A U 229 A G 249 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog120 hydrog ? ? A A 81 N1 ? ? ? 1_555 A U 99 N3 ? ? A A 230 A U 248 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? A A 81 N6 ? ? ? 1_555 A U 99 O4 ? ? A A 230 A U 248 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? A C 82 N3 ? ? ? 1_555 A G 98 N1 ? ? A C 231 A G 247 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? A C 82 N4 ? ? ? 1_555 A G 98 O6 ? ? A C 231 A G 247 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? A C 82 O2 ? ? ? 1_555 A G 98 N2 ? ? A C 231 A G 247 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? A C 83 N3 ? ? ? 1_555 A G 97 N1 ? ? A C 232 A G 246 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A C 83 N4 ? ? ? 1_555 A G 97 O6 ? ? A C 232 A G 246 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A C 83 O2 ? ? ? 1_555 A G 97 N2 ? ? A C 232 A G 246 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A U 84 N3 ? ? ? 1_555 A G 96 O6 ? ? A U 233 A G 245 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog129 hydrog ? ? A U 84 O2 ? ? ? 1_555 A G 96 N1 ? ? A U 233 A G 245 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog130 hydrog ? ? A G 86 N1 ? ? ? 1_555 A C 95 N3 ? ? A G 235 A C 244 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? A G 86 N2 ? ? ? 1_555 A C 95 O2 ? ? A G 235 A C 244 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? A G 86 O6 ? ? ? 1_555 A C 95 N4 ? ? A G 235 A C 244 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? A G 87 N1 ? ? ? 1_555 A C 94 N3 ? ? A G 236 A C 243 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? A G 87 N2 ? ? ? 1_555 A C 94 O2 ? ? A G 236 A C 243 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? A G 87 O6 ? ? ? 1_555 A C 94 N4 ? ? A G 236 A C 243 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? A U 88 N3 ? ? ? 1_555 A U 93 O4 ? ? A U 237 A U 242 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog137 hydrog ? ? A A 103 N1 ? ? ? 1_555 A U 112 N3 ? ? A A 252 A U 261 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? A A 103 N6 ? ? ? 1_555 A U 112 O4 ? ? A A 252 A U 261 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? A C 104 N3 ? ? ? 1_555 A G 111 N1 ? ? A C 253 A G 260 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? A C 104 N4 ? ? ? 1_555 A G 111 O6 ? ? A C 253 A G 260 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? A C 104 O2 ? ? ? 1_555 A G 111 N2 ? ? A C 253 A G 260 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? A C 105 N3 ? ? ? 1_555 A G 110 N1 ? ? A C 254 A G 259 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? A C 105 N4 ? ? ? 1_555 A G 110 O6 ? ? A C 254 A G 259 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? A C 105 O2 ? ? ? 1_555 A G 110 N2 ? ? A C 254 A G 259 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? A G 106 N2 ? ? ? 1_555 A A 109 N7 ? ? A G 255 A A 258 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog146 hydrog ? ? A G 134 N2 ? ? ? 1_555 A G 137 O6 ? ? A G 283 A G 286 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OP1 A G 150 ? ? C5 A G 284 ? ? 1.35 2 1 OP1 A G 150 ? ? C6 A G 284 ? ? 1.56 3 1 OP1 A G 150 ? ? N7 A G 284 ? ? 1.73 4 1 OP1 A G 150 ? ? O6 A G 284 ? ? 1.96 5 1 "O5'" A G 150 ? ? O6 A G 284 ? ? 2.14 6 2 OP1 A G 150 ? ? "O2'" A G 284 ? ? 1.19 7 2 OP1 A G 150 ? ? "C2'" A G 284 ? ? 1.37 8 2 OP1 A G 150 ? ? "H2'" A G 284 ? ? 1.58 9 2 OP1 A G 150 ? ? "C1'" A G 284 ? ? 1.94 10 5 OP1 A G 150 ? ? OP1 A U 285 ? ? 1.75 11 6 OP2 A G 150 ? ? H6 A U 285 ? ? 1.31 12 6 OP2 A G 150 ? ? C6 A U 285 ? ? 1.89 13 7 P A G 150 ? ? "O2'" A G 284 ? ? 1.33 14 7 OP2 A G 150 ? ? "O2'" A G 284 ? ? 2.14 15 9 P A G 150 ? ? H3 A U 285 ? ? 1.35 16 9 OP2 A G 150 ? ? H3 A U 285 ? ? 1.51 17 9 P A G 150 ? ? O2 A U 285 ? ? 1.70 18 9 OP1 A G 150 ? ? O2 A U 285 ? ? 1.72 19 9 P A G 150 ? ? N3 A U 285 ? ? 1.85 20 9 P A G 150 ? ? C2 A U 285 ? ? 1.97 21 9 "O5'" A G 150 ? ? O2 A U 285 ? ? 2.16 22 11 P A G 150 ? ? "O2'" A G 284 ? ? 1.25 23 11 OP1 A G 150 ? ? "O2'" A G 284 ? ? 1.38 24 11 OP1 A G 150 ? ? "C2'" A G 284 ? ? 2.08 25 19 OP1 A G 150 ? ? OP2 A U 285 ? ? 1.79 26 19 P A G 150 ? ? OP2 A U 285 ? ? 2.08 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8UYP _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol OTHER # _em_3d_reconstruction.entry_id 8UYP _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 7.1 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 220917 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source SYNTHETIC _em_entity_assembly.type COMPLEX _em_entity_assembly.name ;SARS-CoV-1 5' proximal stem-loop 5 ; _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_image_scans.entry_id 8UYP _em_image_scans.id 1 _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.scanner_model ? _em_image_scans.sampling_size ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? _em_image_scans.dimension_height 4092 _em_image_scans.dimension_width 5760 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.used_frames_per_image ? # _em_imaging.entry_id 8UYP _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 105000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter 70 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8UYP _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 278 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8UYP _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8UYP _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 U OP3 O N N 111 U P P N N 112 U OP1 O N N 113 U OP2 O N N 114 U "O5'" O N N 115 U "C5'" C N N 116 U "C4'" C N R 117 U "O4'" O N N 118 U "C3'" C N S 119 U "O3'" O N N 120 U "C2'" C N R 121 U "O2'" O N N 122 U "C1'" C N R 123 U N1 N N N 124 U C2 C N N 125 U O2 O N N 126 U N3 N N N 127 U C4 C N N 128 U O4 O N N 129 U C5 C N N 130 U C6 C N N 131 U HOP3 H N N 132 U HOP2 H N N 133 U "H5'" H N N 134 U "H5''" H N N 135 U "H4'" H N N 136 U "H3'" H N N 137 U "HO3'" H N N 138 U "H2'" H N N 139 U "HO2'" H N N 140 U "H1'" H N N 141 U H3 H N N 142 U H5 H N N 143 U H6 H N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 50 mM Na-C8H18N2O4S 1 'Sodium HEPES' 1 10 mM MgCl2 2 'Magnesium Chloride' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.04614 # _em_entity_assembly_synthetic.cell ? _em_entity_assembly_synthetic.entity_assembly_id 1 _em_entity_assembly_synthetic.id 1 _em_entity_assembly_synthetic.ncbi_tax_id 227984 _em_entity_assembly_synthetic.organism 'SARS coronavirus Tor2' _em_entity_assembly_synthetic.strain ? _em_entity_assembly_synthetic.cellular_location ? _em_entity_assembly_synthetic.organ ? _em_entity_assembly_synthetic.organelle ? _em_entity_assembly_synthetic.tissue ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 0.59 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50.0 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 10376 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 1734565 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' Template 1 1 ? ? cryoSPARC 3.2.0 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' 'Patch CTF Estimation' 4 1 ? ? cryoSPARC 3.2.0 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' auto-DRRAFTER 7 ? 1 ? Rosetta 2020.42 OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' phenix.real_space_refine 9 ? 1 ? ERRASER 2 'INITIAL EULER ASSIGNMENT' 'Ab initio reconstruction multi-class' 10 1 ? ? cryoSPARC 3.2.0 'FINAL EULER ASSIGNMENT' 'Non-uniform Refinement' 11 1 ? ? cryoSPARC 3.2.0 CLASSIFICATION 'Heterogeneous refinement' 12 1 ? ? cryoSPARC 3.2.0 RECONSTRUCTION 'Non-uniform Refinement' 13 1 ? ? cryoSPARC 3.2.0 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration 1.38 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8UYP 'double helix' 8UYP 'a-form double helix' 8UYP 'hairpin loop' 8UYP tetraloop 8UYP 'bulge loop' 8UYP 'mismatched base pair' 8UYP 'internal loop' 8UYP 'triple helix' 8UYP 'four-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 143 1_555 -0.221 -0.124 -0.257 0.645 2.917 -2.996 1 A_G150:C292_A A 150 ? A 292 ? 19 1 1 A G 2 1_555 A C 142 1_555 -0.255 -0.197 -0.405 -0.957 -7.688 -0.191 2 A_G151:C291_A A 151 ? A 291 ? 19 1 1 A U 3 1_555 A A 141 1_555 -0.003 -0.164 -0.518 1.441 -7.980 -4.874 3 A_U152:A290_A A 152 ? A 290 ? 20 1 1 A U 4 1_555 A A 140 1_555 -0.005 -0.125 -0.346 2.208 -6.470 -4.737 4 A_U153:A289_A A 153 ? A 289 ? 20 1 1 A G 5 1_555 A C 139 1_555 -0.049 -0.157 -0.177 -2.927 -8.623 -3.311 5 A_G154:C288_A A 154 ? A 288 ? 19 1 1 A A 6 1_555 A U 138 1_555 0.268 0.012 -0.487 -6.985 -12.017 -7.978 6 A_A155:U287_A A 155 ? A 287 ? 20 1 1 A C 7 1_555 A G 134 1_555 -0.098 -0.158 0.485 1.243 -10.024 -9.077 7 A_C156:G283_A A 156 ? A 283 ? 19 1 1 A A 8 1_555 A U 133 1_555 -0.120 -0.034 -0.161 2.847 -14.903 -10.961 8 A_A157:U282_A A 157 ? A 282 ? 20 1 1 A A 9 1_555 A U 132 1_555 -0.008 -0.114 -0.174 -1.081 -17.937 -7.596 9 A_A158:U281_A A 158 ? A 281 ? 20 1 1 A G 10 1_555 A C 131 1_555 -0.054 -0.151 -0.008 -7.953 -16.275 -4.527 10 A_G159:C280_A A 159 ? A 280 ? 19 1 1 A A 11 1_555 A U 130 1_555 0.086 0.087 -0.040 -6.873 -9.002 -13.213 11 A_A160:U279_A A 160 ? A 279 ? 20 1 1 A A 13 1_555 A U 129 1_555 -0.038 -0.073 -0.373 -2.331 -6.534 -6.589 12 A_A162:U278_A A 162 ? A 278 ? 20 1 1 A C 14 1_555 A G 128 1_555 0.172 -0.211 -0.180 3.631 -7.305 -1.711 13 A_C163:G277_A A 163 ? A 277 ? 19 1 1 A G 15 1_555 A U 127 1_555 -1.773 -0.403 -0.088 1.712 -7.124 -3.008 14 A_G164:U276_A A 164 ? A 276 ? 28 1 1 A A 16 1_555 A U 126 1_555 0.030 -0.136 -0.535 -4.704 -13.704 -2.769 15 A_A165:U275_A A 165 ? A 275 ? 20 1 1 A G 17 1_555 A C 125 1_555 0.063 -0.009 -0.279 -12.193 -3.953 -5.166 16 A_G166:C274_A A 166 ? A 274 ? 19 1 1 A A 20 1_555 A C 124 1_555 -2.368 -0.379 0.336 15.138 -16.110 -7.646 17 A_A169:C273_A A 169 ? A 273 ? ? 1 1 A C 21 1_555 A G 123 1_555 0.146 -0.135 -0.045 7.978 -16.370 -0.665 18 A_C170:G272_A A 170 ? A 272 ? 19 1 1 A U 22 1_555 A A 122 1_555 0.157 -0.165 -0.216 -3.029 -16.937 -0.217 19 A_U171:A271_A A 171 ? A 271 ? 20 1 1 A C 23 1_555 A G 121 1_555 0.346 -0.126 0.282 -9.553 -8.484 -1.895 20 A_C172:G270_A A 172 ? A 270 ? 19 1 1 A U 25 1_555 A A 120 1_555 -0.185 -0.089 -0.770 9.210 -2.181 -4.024 21 A_U174:A269_A A 174 ? A 269 ? 20 1 1 A C 26 1_555 A G 119 1_555 0.136 -0.200 -0.421 -0.219 -5.673 -0.340 22 A_C175:G268_A A 175 ? A 268 ? 19 1 1 A C 27 1_555 A G 118 1_555 0.120 -0.142 -0.267 -1.912 -2.680 -2.460 23 A_C176:G267_A A 176 ? A 267 ? 19 1 1 A C 28 1_555 A U 117 1_555 0.568 -0.591 -0.474 -0.839 -8.324 -20.227 24 A_C177:U266_A A 177 ? A 266 ? ? ? 1 A U 29 1_555 A A 116 1_555 0.029 -0.089 -0.156 2.926 -9.776 -6.705 25 A_U178:A265_A A 178 ? A 265 ? 20 1 1 A C 30 1_555 A G 115 1_555 0.148 -0.168 -0.080 5.734 -14.276 -3.301 26 A_C179:G264_A A 179 ? A 264 ? 19 1 1 A U 31 1_555 A A 114 1_555 0.092 -0.184 -0.043 -0.658 -22.356 -4.550 27 A_U180:A263_A A 180 ? A 263 ? 20 1 1 A U 32 1_555 A A 113 1_555 -0.043 -0.090 0.430 -6.794 -17.304 -5.574 28 A_U181:A262_A A 181 ? A 262 ? 20 1 1 A A 103 1_555 A U 112 1_555 -0.084 0.154 -0.429 8.557 -9.362 -17.391 29 A_A252:U261_A A 252 ? A 261 ? 20 1 1 A C 104 1_555 A G 111 1_555 0.134 -0.219 -0.493 7.996 -11.143 -2.132 30 A_C253:G260_A A 253 ? A 260 ? 19 1 1 A C 105 1_555 A G 110 1_555 0.313 -0.285 -0.469 0.427 -2.953 -2.317 31 A_C254:G259_A A 254 ? A 259 ? 19 1 1 A G 106 1_555 A A 109 1_555 7.236 -5.264 0.060 27.387 19.662 -28.020 32 A_G255:A258_A A 255 ? A 258 ? ? ? 1 A U 55 1_555 A U 50 1_555 -2.393 -0.275 0.295 -4.241 15.799 -53.001 33 A_U204:U199_A A 204 ? A 199 ? ? ? 1 A C 56 1_555 A G 49 1_555 -0.088 -0.097 -0.421 4.545 -5.435 -5.784 34 A_C205:G198_A A 205 ? A 198 ? 19 1 1 A C 57 1_555 A G 48 1_555 -0.001 -0.146 -0.236 2.265 -10.976 -3.585 35 A_C206:G197_A A 206 ? A 197 ? 19 1 1 A G 58 1_555 A C 47 1_555 -0.130 -0.188 0.208 -0.443 -8.557 -4.458 36 A_G207:C196_A A 207 ? A 196 ? 19 1 1 A U 59 1_555 A A 46 1_555 -0.002 -0.171 0.296 9.181 -2.295 -4.569 37 A_U208:A195_A A 208 ? A 195 ? 20 1 1 A G 60 1_555 A U 45 1_555 -1.471 -0.570 -1.264 2.269 -10.453 -11.864 38 A_G209:U194_A A 209 ? A 194 ? 28 1 1 A U 62 1_555 A U 44 1_555 -2.289 -1.703 0.145 4.471 -10.025 -0.330 39 A_U211:U193_A A 211 ? A 193 ? 16 1 1 A G 63 1_555 A C 43 1_555 -0.388 -0.244 -0.618 -4.711 -7.757 2.407 40 A_G212:C192_A A 212 ? A 192 ? 19 1 1 A C 64 1_555 A G 42 1_555 0.066 -0.141 -0.258 0.668 -1.607 -1.975 41 A_C213:G191_A A 213 ? A 191 ? 19 1 1 A A 65 1_555 A U 41 1_555 0.072 -0.090 -0.081 -1.005 -6.047 -3.778 42 A_A214:U190_A A 214 ? A 190 ? 20 1 1 A G 66 1_555 A C 40 1_555 -0.127 -0.172 -0.093 -0.261 -12.381 -1.573 43 A_G215:C189_A A 215 ? A 189 ? 19 1 1 A U 67 1_555 A A 39 1_555 0.137 -0.136 -0.281 -0.710 -15.019 -5.059 44 A_U216:A188_A A 216 ? A 188 ? 20 1 1 A C 68 1_555 A G 38 1_555 0.129 -0.024 0.088 -2.326 -4.588 -8.132 45 A_C217:G187_A A 217 ? A 187 ? 19 1 1 A G 69 1_555 A A 73 1_555 3.860 -3.333 0.807 9.325 -26.390 -55.253 46 A_G218:A222_A A 218 ? A 222 ? 10 6 1 A A 37 1_555 A U 74 1_555 -0.265 -0.298 1.184 6.414 27.021 25.086 47 A_A186:U223_A A 186 ? A 223 ? 20 1 1 A G 35 1_555 A C 75 1_555 0.020 -0.149 -0.609 -2.845 -0.249 -6.351 48 A_G184:C224_A A 184 ? A 224 ? 19 1 1 A U 34 1_555 A A 76 1_555 0.038 -0.117 -0.039 -1.226 -6.468 -4.234 49 A_U183:A225_A A 183 ? A 225 ? 20 1 1 A C 33 1_555 A G 77 1_555 0.303 -0.173 -0.129 -2.136 -10.851 0.926 50 A_C182:G226_A A 182 ? A 226 ? 19 1 1 A G 102 1_555 A C 78 1_555 -0.001 -0.143 0.092 -3.832 -11.119 -4.170 51 A_G251:C227_A A 251 ? A 227 ? 19 1 1 A U 101 1_555 A A 79 1_555 0.044 -0.057 -0.089 1.050 -10.705 -4.861 52 A_U250:A228_A A 250 ? A 228 ? 20 1 1 A G 100 1_555 A U 80 1_555 -1.735 -0.389 0.080 0.146 -10.530 -4.554 53 A_G249:U229_A A 249 ? A 229 ? 28 1 1 A U 99 1_555 A A 81 1_555 0.058 -0.169 -0.079 1.806 -10.271 -2.258 54 A_U248:A230_A A 248 ? A 230 ? 20 1 1 A G 98 1_555 A C 82 1_555 -0.258 -0.179 -0.067 -0.575 -12.561 -0.670 55 A_G247:C231_A A 247 ? A 231 ? 19 1 1 A G 97 1_555 A C 83 1_555 -0.189 -0.166 0.051 3.202 -14.354 -2.051 56 A_G246:C232_A A 246 ? A 232 ? 19 1 1 A G 96 1_555 A U 84 1_555 -1.869 -0.512 0.742 5.828 -5.240 -11.979 57 A_G245:U233_A A 245 ? A 233 ? 28 1 1 A C 95 1_555 A G 86 1_555 0.337 -0.380 0.686 10.682 -1.229 -0.710 58 A_C244:G235_A A 244 ? A 235 ? 19 1 1 A C 94 1_555 A G 87 1_555 -0.170 -0.005 0.089 5.434 3.089 -9.509 59 A_C243:G236_A A 243 ? A 236 ? 19 1 1 A U 93 1_555 A U 88 1_555 -3.327 -1.080 0.739 1.541 16.909 -42.420 60 A_U242:U237_A A 242 ? A 237 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 143 1_555 A G 2 1_555 A C 142 1_555 0.014 -1.988 3.575 0.193 9.296 30.514 -5.326 0.009 2.861 17.168 -0.356 31.867 1 AA_G150G151:C291C292_AA A 150 ? A 292 ? A 151 ? A 291 ? 1 A G 2 1_555 A C 142 1_555 A U 3 1_555 A A 141 1_555 -0.414 -1.779 3.471 0.224 7.028 31.354 -4.480 0.789 3.008 12.803 -0.409 32.114 2 AA_G151U152:A290C291_AA A 151 ? A 291 ? A 152 ? A 290 ? 1 A U 3 1_555 A A 141 1_555 A U 4 1_555 A A 140 1_555 0.024 -1.711 3.481 -0.286 9.877 30.427 -4.872 -0.095 2.802 18.225 0.528 31.955 3 AA_U152U153:A289A290_AA A 152 ? A 290 ? A 153 ? A 289 ? 1 A U 4 1_555 A A 140 1_555 A G 5 1_555 A C 139 1_555 0.149 -1.681 3.608 -0.454 12.247 31.449 -4.917 -0.333 2.776 21.596 0.800 33.696 4 AA_U153G154:C288A289_AA A 153 ? A 289 ? A 154 ? A 288 ? 1 A G 5 1_555 A C 139 1_555 A A 6 1_555 A U 138 1_555 -0.056 -1.739 3.559 1.993 9.082 33.682 -4.304 0.401 2.995 15.314 -3.360 34.906 5 AA_G154A155:U287C288_AA A 154 ? A 288 ? A 155 ? A 287 ? 1 A A 6 1_555 A U 138 1_555 A C 7 1_555 A G 134 1_555 2.980 -1.085 2.967 -3.036 6.488 53.942 -1.529 -3.421 2.672 7.117 3.330 54.380 6 AA_A155C156:G283U287_AA A 155 ? A 287 ? A 156 ? A 283 ? 1 A C 7 1_555 A G 134 1_555 A A 8 1_555 A U 133 1_555 -0.200 -1.613 3.338 2.481 8.107 31.879 -4.167 0.758 2.831 14.443 -4.421 32.958 7 AA_C156A157:U282G283_AA A 156 ? A 283 ? A 157 ? A 282 ? 1 A A 8 1_555 A U 133 1_555 A A 9 1_555 A U 132 1_555 0.152 -1.589 3.522 -0.688 9.849 33.098 -4.221 -0.365 2.939 16.828 1.175 34.500 8 AA_A157A158:U281U282_AA A 157 ? A 282 ? A 158 ? A 281 ? 1 A A 9 1_555 A U 132 1_555 A G 10 1_555 A C 131 1_555 0.194 -1.650 3.550 -1.014 12.646 33.139 -4.566 -0.467 2.750 21.228 1.702 35.421 9 AA_A158G159:C280U281_AA A 158 ? A 281 ? A 159 ? A 280 ? 1 A G 10 1_555 A C 131 1_555 A A 11 1_555 A U 130 1_555 -0.558 -1.614 3.376 0.147 12.590 33.121 -4.414 0.939 2.607 21.157 -0.248 35.370 10 AA_G159A160:U279C280_AA A 159 ? A 280 ? A 160 ? A 279 ? 1 A A 11 1_555 A U 130 1_555 A A 13 1_555 A U 129 1_555 -1.121 -1.677 3.260 0.870 9.795 41.305 -3.252 1.632 2.786 13.653 -1.213 42.410 11 AA_A160A162:U278U279_AA A 160 ? A 279 ? A 162 ? A 278 ? 1 A A 13 1_555 A U 129 1_555 A C 14 1_555 A G 128 1_555 0.117 -1.748 3.365 -1.022 6.200 30.693 -4.382 -0.406 2.958 11.562 1.906 31.314 12 AA_A162C163:G277U278_AA A 162 ? A 278 ? A 163 ? A 277 ? 1 A C 14 1_555 A G 128 1_555 A G 15 1_555 A U 127 1_555 0.023 -2.029 3.451 -2.601 10.216 23.288 -7.298 -0.742 2.349 23.806 6.062 25.533 13 AA_C163G164:U276G277_AA A 163 ? A 277 ? A 164 ? A 276 ? 1 A G 15 1_555 A U 127 1_555 A A 16 1_555 A U 126 1_555 0.031 -1.556 3.703 1.182 9.017 38.467 -3.451 0.105 3.270 13.458 -1.764 39.487 14 AA_G164A165:U275U276_AA A 164 ? A 276 ? A 165 ? A 275 ? 1 A A 16 1_555 A U 126 1_555 A G 17 1_555 A C 125 1_555 -0.096 -1.945 3.614 -1.450 12.755 32.395 -5.198 -0.060 2.683 21.823 2.481 34.782 15 AA_A165G166:C274U275_AA A 165 ? A 275 ? A 166 ? A 274 ? 1 A G 17 1_555 A C 125 1_555 A A 20 1_555 A C 124 1_555 -3.243 -2.062 4.567 22.332 7.756 45.048 -3.041 5.603 2.438 9.399 -27.063 50.587 16 AA_G166A169:C273C274_AA A 166 ? A 274 ? A 169 ? A 273 ? 1 A A 20 1_555 A C 124 1_555 A C 21 1_555 A G 123 1_555 0.324 -1.485 3.664 -0.716 9.200 42.712 -2.946 -0.509 3.285 12.457 0.970 43.651 17 AA_A169C170:G272C273_AA A 169 ? A 273 ? A 170 ? A 272 ? 1 A C 21 1_555 A G 123 1_555 A U 22 1_555 A A 122 1_555 0.090 -1.816 3.656 1.744 11.332 31.923 -4.994 0.134 2.865 19.823 -3.051 33.869 18 AA_C170U171:A271G272_AA A 170 ? A 272 ? A 171 ? A 271 ? 1 A U 22 1_555 A A 122 1_555 A C 23 1_555 A G 121 1_555 0.037 -1.775 3.612 -1.302 9.955 32.608 -4.655 -0.275 2.955 17.228 2.253 34.079 19 AA_U171C172:G270A271_AA A 171 ? A 271 ? A 172 ? A 270 ? 1 A C 23 1_555 A G 121 1_555 A U 25 1_555 A A 120 1_555 -2.170 -1.540 3.064 11.451 10.914 44.960 -2.623 3.440 2.077 13.777 -14.455 47.525 20 AA_C172U174:A269G270_AA A 172 ? A 270 ? A 174 ? A 269 ? 1 A U 25 1_555 A A 120 1_555 A C 26 1_555 A G 119 1_555 0.026 -2.022 3.869 -0.995 9.374 32.387 -5.164 -0.223 3.175 16.377 1.738 33.695 21 AA_U174C175:G268A269_AA A 174 ? A 269 ? A 175 ? A 268 ? 1 A C 26 1_555 A G 119 1_555 A C 27 1_555 A G 118 1_555 -0.203 -1.898 3.524 0.101 10.626 29.659 -5.449 0.393 2.699 19.968 -0.190 31.465 22 AA_C175C176:G267G268_AA A 175 ? A 268 ? A 176 ? A 267 ? 1 A C 27 1_555 A G 118 1_555 A C 28 1_555 A U 117 1_555 -1.116 -1.699 3.493 2.320 13.143 32.817 -4.665 2.168 2.564 22.155 -3.910 35.358 23 AA_C176C177:U266G267_AA A 176 ? A 267 ? A 177 ? A 266 ? 1 A C 28 1_555 A U 117 1_555 A U 29 1_555 A A 116 1_555 0.932 -1.707 3.446 -0.257 10.210 28.542 -5.260 -1.834 2.681 19.920 0.501 30.278 24 AA_C177U178:A265U266_AA A 177 ? A 266 ? A 178 ? A 265 ? 1 A U 29 1_555 A A 116 1_555 A C 30 1_555 A G 115 1_555 0.284 -1.605 3.332 0.597 8.227 31.515 -4.241 -0.407 2.838 14.830 -1.076 32.550 25 AA_U178C179:G264A265_AA A 178 ? A 265 ? A 179 ? A 264 ? 1 A C 30 1_555 A G 115 1_555 A U 31 1_555 A A 114 1_555 0.043 -1.606 3.537 1.209 10.150 32.341 -4.407 0.122 2.914 17.680 -2.105 33.877 26 AA_C179U180:A263G264_AA A 179 ? A 264 ? A 180 ? A 263 ? 1 A U 31 1_555 A A 114 1_555 A U 32 1_555 A A 113 1_555 0.150 -1.603 3.533 -1.659 8.245 33.540 -4.003 -0.515 3.054 14.015 2.820 34.549 27 AA_U180U181:A262A263_AA A 180 ? A 263 ? A 181 ? A 262 ? 1 A U 32 1_555 A A 113 1_555 A A 103 1_555 A U 112 1_555 0.451 -1.831 3.194 10.558 15.443 22.907 -6.388 1.023 1.705 32.753 -22.392 29.496 28 AA_U181A252:U261A262_AA A 181 ? A 262 ? A 252 ? A 261 ? 1 A A 103 1_555 A U 112 1_555 A C 104 1_555 A G 111 1_555 0.679 -1.949 3.433 -1.468 4.755 34.936 -3.925 -1.339 3.119 7.870 2.431 35.278 29 AA_A252C253:G260U261_AA A 252 ? A 261 ? A 253 ? A 260 ? 1 A C 104 1_555 A G 111 1_555 A C 105 1_555 A G 110 1_555 -0.053 -1.865 3.650 -0.052 12.253 32.811 -4.989 0.081 2.796 20.809 0.088 34.965 30 AA_C253C254:G259G260_AA A 253 ? A 260 ? A 254 ? A 259 ? 1 A C 105 1_555 A G 110 1_555 A G 106 1_555 A A 109 1_555 -2.583 -1.441 2.945 -7.667 -0.049 53.980 -1.572 2.378 3.257 -0.054 8.399 54.481 31 AA_C254G255:A258G259_AA A 254 ? A 259 ? A 255 ? A 258 ? 1 A U 55 1_555 A U 50 1_555 A C 56 1_555 A G 49 1_555 3.149 -1.784 3.737 -2.651 26.233 40.444 -4.217 -4.078 2.076 33.951 3.431 47.976 32 AA_U204C205:G198U199_AA A 204 ? A 199 ? A 205 ? A 198 ? 1 A C 56 1_555 A G 49 1_555 A C 57 1_555 A G 48 1_555 0.043 -1.809 3.493 -0.721 12.537 31.821 -5.004 -0.183 2.613 21.833 1.256 34.150 33 AA_C205C206:G197G198_AA A 205 ? A 198 ? A 206 ? A 197 ? 1 A C 57 1_555 A G 48 1_555 A G 58 1_555 A C 47 1_555 -0.255 -1.699 3.399 -2.791 15.071 31.108 -5.022 0.028 2.364 26.202 4.852 34.595 34 AA_C206G207:C196G197_AA A 206 ? A 197 ? A 207 ? A 196 ? 1 A G 58 1_555 A C 47 1_555 A U 59 1_555 A A 46 1_555 -0.020 -1.649 3.277 -1.741 6.070 30.056 -4.252 -0.289 2.893 11.545 3.311 30.697 35 AA_G207U208:A195C196_AA A 207 ? A 196 ? A 208 ? A 195 ? 1 A U 59 1_555 A A 46 1_555 A G 60 1_555 A U 45 1_555 -0.285 -1.903 3.732 5.601 15.023 26.577 -6.437 1.604 2.256 29.513 -11.003 30.964 36 AA_U208G209:U194A195_AA A 208 ? A 195 ? A 209 ? A 194 ? 1 A G 60 1_555 A U 45 1_555 A U 62 1_555 A U 44 1_555 -1.263 -2.665 4.881 7.318 16.430 46.499 -4.794 2.225 3.579 19.957 -8.890 49.676 37 AA_G209U211:U193U194_AA A 209 ? A 194 ? A 211 ? A 193 ? 1 A U 62 1_555 A U 44 1_555 A G 63 1_555 A C 43 1_555 0.079 -1.463 3.753 1.615 16.188 38.593 -3.868 0.070 2.937 23.274 -2.322 41.761 38 AA_U211G212:C192U193_AA A 211 ? A 193 ? A 212 ? A 192 ? 1 A G 63 1_555 A C 43 1_555 A C 64 1_555 A G 42 1_555 -0.343 -1.740 3.374 -2.160 9.617 29.596 -4.990 0.245 2.707 18.202 4.089 31.159 39 AA_G212C213:G191C192_AA A 212 ? A 192 ? A 213 ? A 191 ? 1 A C 64 1_555 A G 42 1_555 A A 65 1_555 A U 41 1_555 -0.103 -1.781 3.458 0.081 15.513 29.287 -5.568 0.194 2.255 28.315 -0.148 33.063 40 AA_C213A214:U190G191_AA A 213 ? A 191 ? A 214 ? A 190 ? 1 A A 65 1_555 A U 41 1_555 A G 66 1_555 A C 40 1_555 0.131 -1.757 3.353 0.215 12.587 29.686 -5.239 -0.201 2.428 23.292 -0.398 32.190 41 AA_A214G215:C189U190_AA A 214 ? A 190 ? A 215 ? A 189 ? 1 A G 66 1_555 A C 40 1_555 A U 67 1_555 A A 39 1_555 -0.074 -1.675 3.452 1.464 7.803 32.597 -4.183 0.368 2.977 13.650 -2.561 33.525 42 AA_G215U216:A188C189_AA A 215 ? A 189 ? A 216 ? A 188 ? 1 A U 67 1_555 A A 39 1_555 A C 68 1_555 A G 38 1_555 0.121 -1.844 3.449 -0.744 8.128 33.185 -4.414 -0.323 2.926 13.969 1.279 34.147 43 AA_U216C217:G187A188_AA A 216 ? A 188 ? A 217 ? A 187 ? 1 A C 68 1_555 A G 38 1_555 A G 69 1_555 A A 73 1_555 -2.256 -1.217 2.967 -2.834 14.687 58.278 -1.859 2.132 2.715 14.815 2.859 60.003 44 AA_C217G218:A222G187_AA A 217 ? A 187 ? A 218 ? A 222 ? 1 A G 69 1_555 A A 73 1_555 A A 37 1_555 A U 74 1_555 -0.976 -2.974 -2.146 -158.487 -26.008 -62.913 1.297 0.756 -2.359 13.749 -83.784 -163.479 45 AA_G218A186:U223A222_AA A 218 ? A 222 ? A 186 ? A 223 ? 1 A A 37 1_555 A U 74 1_555 A G 35 1_555 A C 75 1_555 -0.117 2.473 -5.136 -3.886 -16.030 -40.348 -5.578 0.384 -3.921 22.155 -5.370 -43.459 46 AA_A186G184:C224U223_AA A 186 ? A 223 ? A 184 ? A 224 ? 1 A G 35 1_555 A C 75 1_555 A U 34 1_555 A A 76 1_555 0.062 1.750 -3.604 -2.627 -11.319 -30.328 -5.143 0.577 -2.775 20.705 -4.806 -32.429 47 AA_G184U183:A225C224_AA A 184 ? A 224 ? A 183 ? A 225 ? 1 A U 34 1_555 A A 76 1_555 A C 33 1_555 A G 77 1_555 0.290 1.796 -3.352 -0.313 -10.807 -29.535 -5.206 0.591 -2.550 20.358 -0.589 -31.410 48 AA_U183C182:G226A225_AA A 183 ? A 225 ? A 182 ? A 226 ? 1 A C 33 1_555 A G 77 1_555 A G 102 1_555 A C 78 1_555 1.446 1.312 -3.282 -0.379 -7.587 -45.920 -2.281 1.862 -3.029 9.647 -0.482 -46.511 49 AA_C182G251:C227G226_AA A 182 ? A 226 ? A 251 ? A 227 ? 1 A G 102 1_555 A C 78 1_555 A U 101 1_555 A A 79 1_555 -0.048 1.833 -3.513 0.277 -11.416 -30.682 -5.188 -0.132 -2.678 20.697 0.502 -32.690 50 AA_G251U250:A228C227_AA A 251 ? A 227 ? A 250 ? A 228 ? 1 A U 101 1_555 A A 79 1_555 A G 100 1_555 A U 80 1_555 -0.030 1.627 -3.480 0.127 -7.714 -37.078 -3.514 -0.063 -3.092 11.972 0.196 -37.844 51 AA_U250G249:U229A228_AA A 250 ? A 228 ? A 249 ? A 229 ? 1 A G 100 1_555 A U 80 1_555 A U 99 1_555 A A 81 1_555 0.068 1.987 -3.266 2.962 -14.214 -24.788 -6.723 -0.428 -1.868 30.044 6.261 -28.670 52 AA_G249U248:A230U229_AA A 249 ? A 229 ? A 248 ? A 230 ? 1 A U 99 1_555 A A 81 1_555 A G 98 1_555 A C 82 1_555 0.175 1.652 -3.414 0.595 -7.499 -31.087 -4.340 0.211 -2.948 13.740 1.090 -31.963 53 AA_U248G247:C231A230_AA A 248 ? A 230 ? A 247 ? A 231 ? 1 A G 98 1_555 A C 82 1_555 A G 97 1_555 A C 83 1_555 0.077 1.783 -3.467 1.178 -10.085 -30.956 -4.905 -0.063 -2.766 18.288 2.136 -32.540 54 AA_G247G246:C232C231_AA A 247 ? A 231 ? A 246 ? A 232 ? 1 A G 97 1_555 A C 83 1_555 A G 96 1_555 A U 84 1_555 -0.388 1.608 -3.619 -1.461 -6.637 -38.959 -3.212 -0.391 -3.324 9.859 -2.170 -39.524 55 AA_G246G245:U233C232_AA A 246 ? A 232 ? A 245 ? A 233 ? 1 A G 96 1_555 A U 84 1_555 A C 95 1_555 A G 86 1_555 -1.365 2.831 -5.535 24.290 -14.680 -43.026 -4.791 -4.083 -3.309 17.890 29.602 -51.170 56 AA_G245C244:G235U233_AA A 245 ? A 233 ? A 244 ? A 235 ? 1 A C 95 1_555 A G 86 1_555 A C 94 1_555 A G 87 1_555 -0.342 1.671 -3.436 3.689 -13.762 -31.767 -4.790 -1.107 -2.469 23.708 6.355 -34.741 57 AA_C244C243:G236G235_AA A 244 ? A 235 ? A 243 ? A 236 ? 1 A C 94 1_555 A G 87 1_555 A U 93 1_555 A U 88 1_555 -1.860 1.908 -3.886 2.483 -19.347 -42.839 -4.102 -2.557 -2.723 25.000 3.209 -46.880 58 AA_C243U242:U237G236_AA A 243 ? A 236 ? A 242 ? A 237 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R35GM122579 1 'Howard Hughes Medical Institute (HHMI)' 'United States' ? 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' U24GM129541 3 'National Science Foundation (NSF, United States)' 'United States' GRFPDGE1656518 4 'Ministry of Science and Technology (MoST, China)' China 2022YFC2303700 5 'Ministry of Science and Technology (MoST, China)' China 2022YFA1302700 6 'Other private' 'United States' 'BioX Bowes fellowship' 7 'Other private' 'United States' 'BioX Interdisciplinary Initiative Program' 8 'Other private' 'United States' 'ChEM-H COVID-19 Drug and Vaccine Prototyping seed grant' 9 'Department of Energy (DOE, United States)' 'United States' 'Coronavirus CARES Act' 10 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' '#U19AI171421' 11 # _atom_sites.entry_id 8UYP _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_