HEADER PLANT PROTEIN 14-NOV-23 8UZD TITLE THE STRUCTURE OF IPCS3, A THEOBROMINE METHYLTRANSFERASE FROM YERBA TITLE 2 MATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: IPCS3; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ILEX PARAGUARIENSIS; SOURCE 3 ORGANISM_TAXID: 185542; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS YERBA MATE, METHYLTRANSFERASE, PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.HERNANDEZ GARCIA,S.K.NAIR REVDAT 2 24-JAN-24 8UZD 1 SPRSDE REVDAT 1 10-JAN-24 8UZD 0 SPRSDE 24-JAN-24 8UZD 8T2G JRNL AUTH F.A.VIGNALE,A.HERNANDEZ GARCIA,C.P.MODENUTTI,E.J.SOSA, JRNL AUTH 2 L.A.DEFELIPE,R.R.M.OLIVEIRA,G.L.NUNES,R.M.ACEVEDO, JRNL AUTH 3 G.F.BURGUENER,M.ROSSI,P.D.ZAPATA,D.A.MARTI,G.OLIVEIRA, JRNL AUTH 4 M.N.SMITH,N.M.DUBS,S.K.NAIR,T.J.BARKMAN,A.G.TURJANSKI JRNL TITL YERBA MATE (ILEX PARAGUARIENSIS) GENOME PROVIDES NEW JRNL TITL 2 INSIGHTS INTO CONVERGENT EVOLUTION OF CAFFEINE BIOSYNTHESIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 21909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.943 REMARK 3 FREE R VALUE TEST SET COUNT : 1083 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.72 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1494 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2840 REMARK 3 BIN FREE R VALUE SET COUNT : 78 REMARK 3 BIN FREE R VALUE : 0.3690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5212 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 80 REMARK 3 SOLVENT ATOMS : 48 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03500 REMARK 3 B22 (A**2) : -0.03500 REMARK 3 B33 (A**2) : 0.07100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.348 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.270 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.584 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5407 ; 0.004 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7332 ; 1.112 ; 1.633 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 658 ; 6.444 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 257 ;35.542 ;23.385 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 939 ;18.625 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;10.968 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 703 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4056 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2303 ; 0.206 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3692 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 133 ; 0.140 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2653 ; 4.027 ; 6.200 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3304 ; 6.415 ; 9.290 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2754 ; 4.487 ; 6.428 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4028 ; 6.889 ; 9.476 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 26 A 366 NULL REMARK 3 2 B 26 B 366 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE NOT BEEN USED REMARK 4 REMARK 4 8UZD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1000279120. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21910 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.720 REMARK 200 RESOLUTION RANGE LOW (A) : 37.001 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.7900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.82 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.2 M NH4SO4, 0.1 M BIS REMARK 280 TRIS METHANE PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 282.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 113.04400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 41.33750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 41.33750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.52200 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 41.33750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 41.33750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 169.56600 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 41.33750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.33750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 56.52200 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 41.33750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.33750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 169.56600 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 113.04400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 82.67500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 HIS A 2 REMARK 465 MET A 3 REMARK 465 ASP A 4 REMARK 465 VAL A 5 REMARK 465 LYS A 6 REMARK 465 GLY A 7 REMARK 465 ALA A 8 REMARK 465 LEU A 9 REMARK 465 PHE A 10 REMARK 465 MET A 11 REMARK 465 ASN A 12 REMARK 465 GLY A 13 REMARK 465 GLY A 14 REMARK 465 ASP A 15 REMARK 465 LEU A 16 REMARK 465 GLU A 17 REMARK 465 SER A 18 REMARK 465 SER A 19 REMARK 465 TYR A 20 REMARK 465 ALA A 21 REMARK 465 GLN A 22 REMARK 465 HIS A 23 REMARK 465 GLY A 24 REMARK 465 VAL A 116 REMARK 465 GLY A 117 REMARK 465 LYS A 118 REMARK 465 ASP A 119 REMARK 465 GLN A 120 REMARK 465 LYS A 121 REMARK 465 SER A 122 REMARK 465 ASP A 123 REMARK 465 VAL A 124 REMARK 465 SER B 1 REMARK 465 HIS B 2 REMARK 465 MET B 3 REMARK 465 ASP B 4 REMARK 465 VAL B 5 REMARK 465 LYS B 6 REMARK 465 GLY B 7 REMARK 465 ALA B 8 REMARK 465 LEU B 9 REMARK 465 PHE B 10 REMARK 465 MET B 11 REMARK 465 ASN B 12 REMARK 465 GLY B 13 REMARK 465 GLY B 14 REMARK 465 ASP B 15 REMARK 465 LEU B 16 REMARK 465 GLU B 17 REMARK 465 SER B 18 REMARK 465 SER B 19 REMARK 465 TYR B 20 REMARK 465 ALA B 21 REMARK 465 GLN B 22 REMARK 465 HIS B 23 REMARK 465 GLY B 24 REMARK 465 CYS B 25 REMARK 465 VAL B 116 REMARK 465 GLY B 117 REMARK 465 LYS B 118 REMARK 465 ASP B 119 REMARK 465 GLN B 120 REMARK 465 LYS B 121 REMARK 465 SER B 122 REMARK 465 ASP B 123 REMARK 465 SER B 168 REMARK 465 LYS B 169 REMARK 465 GLU B 170 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 CYS A 25 SG REMARK 470 VAL B 124 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 64 -140.56 51.30 REMARK 500 SER A 145 70.78 35.64 REMARK 500 ASN A 175 63.36 66.09 REMARK 500 GLN A 301 30.51 -77.94 REMARK 500 SER A 350 -80.29 -129.09 REMARK 500 THR A 365 -143.29 -117.73 REMARK 500 ALA B 64 -140.06 51.45 REMARK 500 ALA B 92 151.60 -48.42 REMARK 500 LEU B 125 -132.30 -140.81 REMARK 500 ARG B 126 -103.75 57.43 REMARK 500 SER B 145 70.05 35.30 REMARK 500 LEU B 172 128.75 71.84 REMARK 500 ASN B 175 64.73 66.23 REMARK 500 CYS B 236 58.51 -119.52 REMARK 500 GLN B 301 23.58 -77.21 REMARK 500 VAL B 307 -50.97 74.88 REMARK 500 SER B 350 -80.17 -128.58 REMARK 500 THR B 365 -144.07 -119.29 REMARK 500 REMARK 500 REMARK: NULL DBREF 8UZD A 1 366 PDB 8UZD 8UZD 1 366 DBREF 8UZD B 1 366 PDB 8UZD 8UZD 1 366 SEQRES 1 A 366 SER HIS MET ASP VAL LYS GLY ALA LEU PHE MET ASN GLY SEQRES 2 A 366 GLY ASP LEU GLU SER SER TYR ALA GLN HIS GLY CYS PHE SEQRES 3 A 366 SER GLN LYS VAL THR SER ILE THR LYS PRO ILE LEU VAL SEQRES 4 A 366 ASN ALA ILE HIS SER LEU PHE SER GLU TYR PHE HIS ARG SEQRES 5 A 366 GLU LYS VAL LEU ASN VAL ALA ASP LEU GLY CYS ALA ALA SEQRES 6 A 366 GLY PRO ASN PRO PHE SER VAL ILE LEU THR VAL LYS GLU SEQRES 7 A 366 SER LEU GLU ARG LYS CYS LYS GLU LEU ASN CYS GLN PRO SEQRES 8 A 366 ALA GLU LEU GLN VAL TYR LEU ASN ASP LEU PRO GLY ASN SEQRES 9 A 366 ASP PHE ASN SER LEU PHE LYS ASP LEU SER GLY VAL GLY SEQRES 10 A 366 LYS ASP GLN LYS SER ASP VAL LEU ARG THR CYS PHE VAL SEQRES 11 A 366 MET GLY ALA PRO GLY SER PHE TYR GLY ARG LEU PHE PRO SEQRES 12 A 366 ARG SER CYS LEU HIS LEU VAL HIS SER CYS TYR SER VAL SEQRES 13 A 366 HIS TRP LEU SER GLN VAL PRO LYS GLY LEU THR SER LYS SEQRES 14 A 366 GLU GLY LEU PRO LEU ASN LYS GLY LYS ILE ASN ILE SER SEQRES 15 A 366 LYS THR SER PRO PRO VAL VAL GLU ALA ALA TYR LEU ALA SEQRES 16 A 366 GLN PHE LYS GLU ASP PHE THR LEU LEU LEU LYS SER ARG SEQRES 17 A 366 ALA GLU GLU MET VAL GLN ASN GLY ARG MET VAL LEU ILE SEQRES 18 A 366 LEU ASN GLY ARG GLN ALA SER ASP PRO TRP GLY LYS GLU SEQRES 19 A 366 SER CYS TYR HIS TRP GLU VAL LEU ALA GLU ALA ILE SER SEQRES 20 A 366 GLU MET VAL SER GLN GLY LEU VAL ASP GLU GLU LYS LEU SEQRES 21 A 366 ASP SER PHE ASN VAL PRO CYS TYR ALA PRO SER GLN GLU SEQRES 22 A 366 GLU VAL GLN ASP ILE VAL ASP LYS VAL GLY SER PHE ALA SEQRES 23 A 366 VAL GLU HIS ILE GLU THR PHE THR LEU PRO PHE ALA ASN SEQRES 24 A 366 ASP GLN GLU SER ASP THR ARG VAL LYS GLY GLU GLN LEU SEQRES 25 A 366 ALA LYS ASN ILE ARG SER PHE THR GLU SER ILE ILE SER SEQRES 26 A 366 TYR GLU PHE GLY LYS GLU ILE THR GLU LYS VAL TYR HIS SEQRES 27 A 366 LYS LEU THR GLN ILE VAL VAL LYS ASP MET ALA SER ARG SEQRES 28 A 366 PRO PRO THR ASN THR THR VAL VAL VAL VAL LEU SER ARG SEQRES 29 A 366 THR MET SEQRES 1 B 366 SER HIS MET ASP VAL LYS GLY ALA LEU PHE MET ASN GLY SEQRES 2 B 366 GLY ASP LEU GLU SER SER TYR ALA GLN HIS GLY CYS PHE SEQRES 3 B 366 SER GLN LYS VAL THR SER ILE THR LYS PRO ILE LEU VAL SEQRES 4 B 366 ASN ALA ILE HIS SER LEU PHE SER GLU TYR PHE HIS ARG SEQRES 5 B 366 GLU LYS VAL LEU ASN VAL ALA ASP LEU GLY CYS ALA ALA SEQRES 6 B 366 GLY PRO ASN PRO PHE SER VAL ILE LEU THR VAL LYS GLU SEQRES 7 B 366 SER LEU GLU ARG LYS CYS LYS GLU LEU ASN CYS GLN PRO SEQRES 8 B 366 ALA GLU LEU GLN VAL TYR LEU ASN ASP LEU PRO GLY ASN SEQRES 9 B 366 ASP PHE ASN SER LEU PHE LYS ASP LEU SER GLY VAL GLY SEQRES 10 B 366 LYS ASP GLN LYS SER ASP VAL LEU ARG THR CYS PHE VAL SEQRES 11 B 366 MET GLY ALA PRO GLY SER PHE TYR GLY ARG LEU PHE PRO SEQRES 12 B 366 ARG SER CYS LEU HIS LEU VAL HIS SER CYS TYR SER VAL SEQRES 13 B 366 HIS TRP LEU SER GLN VAL PRO LYS GLY LEU THR SER LYS SEQRES 14 B 366 GLU GLY LEU PRO LEU ASN LYS GLY LYS ILE ASN ILE SER SEQRES 15 B 366 LYS THR SER PRO PRO VAL VAL GLU ALA ALA TYR LEU ALA SEQRES 16 B 366 GLN PHE LYS GLU ASP PHE THR LEU LEU LEU LYS SER ARG SEQRES 17 B 366 ALA GLU GLU MET VAL GLN ASN GLY ARG MET VAL LEU ILE SEQRES 18 B 366 LEU ASN GLY ARG GLN ALA SER ASP PRO TRP GLY LYS GLU SEQRES 19 B 366 SER CYS TYR HIS TRP GLU VAL LEU ALA GLU ALA ILE SER SEQRES 20 B 366 GLU MET VAL SER GLN GLY LEU VAL ASP GLU GLU LYS LEU SEQRES 21 B 366 ASP SER PHE ASN VAL PRO CYS TYR ALA PRO SER GLN GLU SEQRES 22 B 366 GLU VAL GLN ASP ILE VAL ASP LYS VAL GLY SER PHE ALA SEQRES 23 B 366 VAL GLU HIS ILE GLU THR PHE THR LEU PRO PHE ALA ASN SEQRES 24 B 366 ASP GLN GLU SER ASP THR ARG VAL LYS GLY GLU GLN LEU SEQRES 25 B 366 ALA LYS ASN ILE ARG SER PHE THR GLU SER ILE ILE SER SEQRES 26 B 366 TYR GLU PHE GLY LYS GLU ILE THR GLU LYS VAL TYR HIS SEQRES 27 B 366 LYS LEU THR GLN ILE VAL VAL LYS ASP MET ALA SER ARG SEQRES 28 B 366 PRO PRO THR ASN THR THR VAL VAL VAL VAL LEU SER ARG SEQRES 29 B 366 THR MET HET SAH A 401 26 HET CFF A 402 14 HET SAH B 500 26 HET CFF B 501 14 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM CFF CAFFEINE HETSYN CFF 3,7-DIHYDRO-1,3,7-TRIMETHYL-1H-PURINE-2,6-DIONE FORMUL 3 SAH 2(C14 H20 N6 O5 S) FORMUL 4 CFF 2(C8 H10 N4 O2) FORMUL 7 HOH *48(H2 O) HELIX 1 AA1 CYS A 25 SER A 47 1 23 HELIX 2 AA2 GLU A 48 GLU A 53 5 6 HELIX 3 AA3 PRO A 67 ASN A 88 1 22 HELIX 4 AA4 ASP A 105 LEU A 113 1 9 HELIX 5 AA5 PRO A 186 GLU A 211 1 26 HELIX 6 AA6 CYS A 236 GLN A 252 1 17 HELIX 7 AA7 ASP A 256 SER A 262 1 7 HELIX 8 AA8 SER A 271 VAL A 282 1 12 HELIX 9 AA9 ASP A 304 ALA A 349 1 46 HELIX 10 AB1 SER B 27 SER B 47 1 21 HELIX 11 AB2 GLU B 48 GLU B 53 5 6 HELIX 12 AB3 PRO B 67 ASN B 88 1 22 HELIX 13 AB4 ASP B 105 LEU B 113 1 9 HELIX 14 AB5 PRO B 186 GLU B 211 1 26 HELIX 15 AB6 CYS B 236 GLN B 252 1 17 HELIX 16 AB7 ASP B 256 SER B 262 1 7 HELIX 17 AB8 SER B 271 VAL B 282 1 12 HELIX 18 AB9 ASP B 304 ALA B 349 1 46 SHEET 1 AA114 CYS A 128 PRO A 134 0 SHEET 2 AA114 GLU A 93 ASP A 100 1 N LEU A 94 O PHE A 129 SHEET 3 AA114 VAL A 55 LEU A 61 1 N VAL A 58 O TYR A 97 SHEET 4 AA114 LEU A 147 CYS A 153 1 O HIS A 151 N ALA A 59 SHEET 5 AA114 MET A 212 GLY A 224 1 O VAL A 219 N VAL A 150 SHEET 6 AA114 THR A 354 ARG A 364 -1 O THR A 356 N GLY A 224 SHEET 7 AA114 PHE A 285 PRO A 296 -1 N GLU A 288 O VAL A 361 SHEET 8 AA114 PHE B 285 PRO B 296 -1 O THR B 294 N ILE A 290 SHEET 9 AA114 THR B 354 ARG B 364 -1 O VAL B 361 N GLU B 288 SHEET 10 AA114 MET B 212 GLY B 224 -1 N GLY B 224 O THR B 356 SHEET 11 AA114 LEU B 147 CYS B 153 1 N VAL B 150 O VAL B 219 SHEET 12 AA114 VAL B 55 LEU B 61 1 N ALA B 59 O HIS B 151 SHEET 13 AA114 GLU B 93 ASP B 100 1 O TYR B 97 N VAL B 58 SHEET 14 AA114 CYS B 128 PRO B 134 1 O PHE B 129 N LEU B 94 CRYST1 82.675 82.675 226.088 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012096 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012096 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004423 0.00000