HEADER HYDROLASE/DNA 17-NOV-23 8V08 TITLE CRYSTAL STRUCTURE OF HUMAN PLD4 CO-CRYSTALLIZED WITH 5'PI-SSDNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-3' EXONUCLEASE PLD4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CHOLINE PHOSPHATASE 4,PHOSPHATIDYLCHOLINE-HYDROLYZING COMPND 5 PHOSPHOLIPASE D4,PHOSPHOLIPASE D FAMILY MEMBER 4,PHOSPHOLIPASE D4,PLD COMPND 6 4; COMPND 7 EC: 3.1.16.1; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: 5'-3' EXONUCLEASE PLD4; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: CHOLINE PHOSPHATASE 4,PHOSPHATIDYLCHOLINE-HYDROLYZING COMPND 13 PHOSPHOLIPASE D4,PHOSPHOLIPASE D FAMILY MEMBER 4,PHOSPHOLIPASE D4,PLD COMPND 14 4; COMPND 15 EC: 3.1.16.1; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 3; COMPND 18 MOLECULE: SSDNA; COMPND 19 CHAIN: C, D; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLD4, C14ORF175, UNQ2488/PRO5775; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: PLD4, C14ORF175, UNQ2488/PRO5775; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606 KEYWDS PLD4, PHOSPHOLIPASE, PHOSPHOHISTIDINE, NUCLEASE, HYDROLASE-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.YUAN,I.A.WILSON REVDAT 2 17-APR-24 8V08 1 JRNL REVDAT 1 13-MAR-24 8V08 0 JRNL AUTH M.YUAN,L.PENG,D.HUANG,A.GAVIN,F.LUAN,J.TRAN,Z.FENG,X.ZHU, JRNL AUTH 2 J.MATTESON,I.A.WILSON,D.NEMAZEE JRNL TITL STRUCTURAL AND MECHANISTIC INSIGHTS INTO DISEASE-ASSOCIATED JRNL TITL 2 ENDOLYSOSOMAL EXONUCLEASES PLD3 AND PLD4. JRNL REF STRUCTURE 2024 JRNL REFN ISSN 0969-2126 JRNL PMID 38537643 JRNL DOI 10.1016/J.STR.2024.02.019 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.19.2_4158: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 26111 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.266 REMARK 3 R VALUE (WORKING SET) : 0.263 REMARK 3 FREE R VALUE : 0.318 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1299 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6600 - 6.2300 1.00 2958 157 0.2331 0.2892 REMARK 3 2 6.2300 - 4.9500 1.00 2800 140 0.2693 0.2856 REMARK 3 3 4.9500 - 4.3200 1.00 2770 156 0.2371 0.2993 REMARK 3 4 4.3200 - 3.9300 1.00 2758 125 0.2656 0.3464 REMARK 3 5 3.9300 - 3.6500 1.00 2734 143 0.2954 0.3703 REMARK 3 6 3.6500 - 3.4300 1.00 2697 152 0.2886 0.3577 REMARK 3 7 3.4300 - 3.2600 1.00 2726 140 0.3331 0.3637 REMARK 3 8 3.2600 - 3.1200 1.00 2729 137 0.3527 0.4738 REMARK 3 9 3.1200 - 3.0000 0.99 2640 149 0.3568 0.3527 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.540 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 39.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 6450 REMARK 3 ANGLE : 1.010 8810 REMARK 3 CHIRALITY : 0.053 989 REMARK 3 PLANARITY : 0.010 1109 REMARK 3 DIHEDRAL : 29.256 922 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.7036 -29.8674 -30.4547 REMARK 3 T TENSOR REMARK 3 T11: 0.7235 T22: 1.6749 REMARK 3 T33: 0.4058 T12: 0.1904 REMARK 3 T13: -0.0887 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 2.1134 L22: 5.6261 REMARK 3 L33: 2.6352 L12: -0.7943 REMARK 3 L13: 0.9742 L23: 2.7631 REMARK 3 S TENSOR REMARK 3 S11: -0.1425 S12: -1.6182 S13: -0.0554 REMARK 3 S21: 1.6697 S22: 0.3209 S23: 0.1333 REMARK 3 S31: 0.1263 S32: -1.0975 S33: -0.2684 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 137 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6477 -42.9375 -34.3532 REMARK 3 T TENSOR REMARK 3 T11: 0.5316 T22: 1.5142 REMARK 3 T33: 1.0019 T12: 0.1603 REMARK 3 T13: -0.1115 T23: 0.3474 REMARK 3 L TENSOR REMARK 3 L11: 3.2001 L22: 2.2826 REMARK 3 L33: 2.5369 L12: 0.1079 REMARK 3 L13: -1.0515 L23: -0.8884 REMARK 3 S TENSOR REMARK 3 S11: 0.4346 S12: -1.4146 S13: -0.0879 REMARK 3 S21: 0.5223 S22: -0.4240 S23: -0.2697 REMARK 3 S31: -0.4573 S32: 0.1661 S33: 0.2057 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5087 -34.1471 -34.5224 REMARK 3 T TENSOR REMARK 3 T11: 0.5569 T22: 2.2329 REMARK 3 T33: 0.5247 T12: -0.0226 REMARK 3 T13: 0.1353 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 1.8858 L22: 4.3236 REMARK 3 L33: 1.8289 L12: -1.9216 REMARK 3 L13: -1.8074 L23: 1.4435 REMARK 3 S TENSOR REMARK 3 S11: -0.1880 S12: -0.9816 S13: -0.2392 REMARK 3 S21: 0.5963 S22: -0.2317 S23: 0.0698 REMARK 3 S31: 0.3689 S32: 0.1290 S33: 0.0981 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 251 THROUGH 287 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.2391 -50.5636 -43.3602 REMARK 3 T TENSOR REMARK 3 T11: 0.8001 T22: 0.6703 REMARK 3 T33: 1.1026 T12: -0.1139 REMARK 3 T13: -0.0308 T23: 0.5096 REMARK 3 L TENSOR REMARK 3 L11: 9.4733 L22: 0.9950 REMARK 3 L33: 5.6529 L12: -1.9678 REMARK 3 L13: 5.0960 L23: -0.8503 REMARK 3 S TENSOR REMARK 3 S11: 0.2668 S12: -1.4362 S13: 0.1089 REMARK 3 S21: -0.1840 S22: 0.4876 S23: 0.8447 REMARK 3 S31: -0.0087 S32: -1.6163 S33: -0.2708 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 288 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.3540 -39.2734 -46.7324 REMARK 3 T TENSOR REMARK 3 T11: 0.8749 T22: 1.8140 REMARK 3 T33: 1.0532 T12: 0.3450 REMARK 3 T13: -0.0342 T23: 0.1412 REMARK 3 L TENSOR REMARK 3 L11: 7.2061 L22: 6.7520 REMARK 3 L33: 5.6210 L12: -0.0452 REMARK 3 L13: -6.2431 L23: 1.2298 REMARK 3 S TENSOR REMARK 3 S11: 0.0729 S12: -0.0951 S13: -0.3969 REMARK 3 S21: -0.9740 S22: -0.0092 S23: 0.7029 REMARK 3 S31: -0.2698 S32: -2.3161 S33: 0.4379 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 320 THROUGH 434 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.9640 -24.8337 -55.6275 REMARK 3 T TENSOR REMARK 3 T11: 0.2992 T22: 0.6124 REMARK 3 T33: 0.5807 T12: 0.1580 REMARK 3 T13: 0.0162 T23: -0.0466 REMARK 3 L TENSOR REMARK 3 L11: 3.4583 L22: 3.7261 REMARK 3 L33: 4.4289 L12: 1.6590 REMARK 3 L13: -0.1462 L23: -1.0155 REMARK 3 S TENSOR REMARK 3 S11: 0.0726 S12: -0.9835 S13: -0.0050 REMARK 3 S21: 0.0104 S22: -0.1885 S23: -0.1038 REMARK 3 S31: 0.1207 S32: -0.2824 S33: 0.0183 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 435 THROUGH 505 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.3120 -23.3258 -48.3794 REMARK 3 T TENSOR REMARK 3 T11: 0.5262 T22: 1.1674 REMARK 3 T33: 0.7736 T12: 0.2173 REMARK 3 T13: -0.0953 T23: -0.1854 REMARK 3 L TENSOR REMARK 3 L11: 3.6420 L22: 5.4385 REMARK 3 L33: 2.2108 L12: 1.0168 REMARK 3 L13: -0.2789 L23: -1.1119 REMARK 3 S TENSOR REMARK 3 S11: -0.2607 S12: -1.4186 S13: 0.8845 REMARK 3 S21: 0.1095 S22: 0.3722 S23: -0.1281 REMARK 3 S31: -0.3653 S32: -0.4921 S33: -0.0695 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 94 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3497 -22.8388-105.4039 REMARK 3 T TENSOR REMARK 3 T11: 1.1979 T22: 0.8924 REMARK 3 T33: 0.5392 T12: 0.4284 REMARK 3 T13: 0.1139 T23: 0.0861 REMARK 3 L TENSOR REMARK 3 L11: 3.1880 L22: 1.4123 REMARK 3 L33: 3.1032 L12: -0.5657 REMARK 3 L13: -1.8754 L23: -1.2821 REMARK 3 S TENSOR REMARK 3 S11: 0.8589 S12: 0.1394 S13: 0.4293 REMARK 3 S21: -1.2802 S22: -0.5196 S23: 0.2699 REMARK 3 S31: 0.0369 S32: -0.3218 S33: -0.1879 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 137 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.8848 -17.8715-102.5610 REMARK 3 T TENSOR REMARK 3 T11: 1.5325 T22: 0.8433 REMARK 3 T33: 0.6239 T12: 0.9054 REMARK 3 T13: -0.4509 T23: 0.0973 REMARK 3 L TENSOR REMARK 3 L11: 1.5650 L22: 0.1982 REMARK 3 L33: 0.8575 L12: -0.2827 REMARK 3 L13: -0.0543 L23: 0.0036 REMARK 3 S TENSOR REMARK 3 S11: 0.2314 S12: 0.0465 S13: 0.2805 REMARK 3 S21: -0.5071 S22: 0.0632 S23: 0.1184 REMARK 3 S31: 0.0915 S32: -0.0194 S33: 0.5975 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 217 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.1495 -28.0645-101.3580 REMARK 3 T TENSOR REMARK 3 T11: 1.7067 T22: 0.6079 REMARK 3 T33: 0.7175 T12: 0.9753 REMARK 3 T13: -0.1610 T23: -0.0458 REMARK 3 L TENSOR REMARK 3 L11: 0.9295 L22: 3.4059 REMARK 3 L33: 0.7402 L12: -0.1644 REMARK 3 L13: 0.2567 L23: -1.4266 REMARK 3 S TENSOR REMARK 3 S11: 0.8297 S12: 0.7029 S13: -0.0033 REMARK 3 S21: -1.2914 S22: -0.2223 S23: 0.8229 REMARK 3 S31: 0.2407 S32: -0.0540 S33: 1.1722 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 267 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.1726 -39.6842 -91.7552 REMARK 3 T TENSOR REMARK 3 T11: 1.5436 T22: 0.7916 REMARK 3 T33: 0.9217 T12: 0.3827 REMARK 3 T13: -0.1324 T23: -0.1254 REMARK 3 L TENSOR REMARK 3 L11: 3.3278 L22: 1.7925 REMARK 3 L33: 4.0794 L12: 1.6117 REMARK 3 L13: -3.0185 L23: -0.2838 REMARK 3 S TENSOR REMARK 3 S11: -0.6572 S12: -0.2780 S13: -0.5272 REMARK 3 S21: -0.3758 S22: 0.2821 S23: -0.4187 REMARK 3 S31: 2.3390 S32: 1.1440 S33: 0.5412 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 320 THROUGH 411 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.0827 -23.6654 -77.1415 REMARK 3 T TENSOR REMARK 3 T11: 0.5787 T22: 0.6336 REMARK 3 T33: 0.6943 T12: 0.2838 REMARK 3 T13: 0.1359 T23: 0.0443 REMARK 3 L TENSOR REMARK 3 L11: 4.7106 L22: 4.8165 REMARK 3 L33: 4.3994 L12: -1.1219 REMARK 3 L13: 1.6666 L23: -0.4549 REMARK 3 S TENSOR REMARK 3 S11: 0.2778 S12: 0.4376 S13: -0.0336 REMARK 3 S21: -1.0353 S22: -0.3643 S23: -0.0347 REMARK 3 S31: 0.2160 S32: 0.1056 S33: -0.0179 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 412 THROUGH 485 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.9545 -21.9526 -90.1256 REMARK 3 T TENSOR REMARK 3 T11: 0.9580 T22: 0.7093 REMARK 3 T33: 0.5050 T12: 0.5525 REMARK 3 T13: -0.0698 T23: 0.1841 REMARK 3 L TENSOR REMARK 3 L11: 2.3679 L22: 4.5732 REMARK 3 L33: 1.4381 L12: 0.5441 REMARK 3 L13: 0.8993 L23: -0.1954 REMARK 3 S TENSOR REMARK 3 S11: 0.4318 S12: 0.2820 S13: -0.2806 REMARK 3 S21: -0.9903 S22: -0.6551 S23: 0.6216 REMARK 3 S31: 0.5503 S32: 0.5246 S33: 0.0907 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 486 THROUGH 505 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7245 -7.0236 -81.7458 REMARK 3 T TENSOR REMARK 3 T11: 1.0838 T22: 0.5156 REMARK 3 T33: 1.6472 T12: -0.0660 REMARK 3 T13: 0.5026 T23: 0.4631 REMARK 3 L TENSOR REMARK 3 L11: 2.0485 L22: 0.0498 REMARK 3 L33: 1.4142 L12: -0.1266 REMARK 3 L13: -1.6954 L23: 0.0651 REMARK 3 S TENSOR REMARK 3 S11: 0.6738 S12: -0.0232 S13: 0.5430 REMARK 3 S21: -0.3170 S22: -0.2293 S23: -0.1188 REMARK 3 S31: -1.0460 S32: 0.2012 S33: 0.5489 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 3 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4026 -37.8065 -49.7507 REMARK 3 T TENSOR REMARK 3 T11: 1.4628 T22: 1.7261 REMARK 3 T33: 1.4887 T12: -0.2892 REMARK 3 T13: -0.1909 T23: 0.0588 REMARK 3 L TENSOR REMARK 3 L11: 6.5480 L22: 4.4255 REMARK 3 L33: 2.2685 L12: 5.3037 REMARK 3 L13: 2.2342 L23: 2.0646 REMARK 3 S TENSOR REMARK 3 S11: 1.6466 S12: -0.9459 S13: -2.9933 REMARK 3 S21: -1.1625 S22: 1.2879 S23: -0.1693 REMARK 3 S31: 2.7281 S32: -1.4382 S33: -2.7105 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 3 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.7826 -14.8964 -85.7268 REMARK 3 T TENSOR REMARK 3 T11: 2.2546 T22: 2.1371 REMARK 3 T33: 1.9737 T12: -0.3276 REMARK 3 T13: -0.2295 T23: 0.4641 REMARK 3 L TENSOR REMARK 3 L11: 4.6264 L22: 7.2368 REMARK 3 L33: 5.6310 L12: -3.8764 REMARK 3 L13: -1.2622 L23: 5.4273 REMARK 3 S TENSOR REMARK 3 S11: 3.2197 S12: -2.2700 S13: -2.4263 REMARK 3 S21: 0.5554 S22: -2.2500 S23: 1.7716 REMARK 3 S31: 0.2606 S32: 0.4521 S33: -1.7558 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8V08 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1000279275. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26166 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 18.30 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 13.70 REMARK 200 R MERGE FOR SHELL (I) : 1.65900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CHLORIDE, 0.5 MM REMARK 280 MAGNESIUM CHLORIDE, 0.1 M PHOSPHATE-CITRATE, PH 4.2, 10% W/V REMARK 280 PEG3000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.32267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 182.64533 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 182.64533 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 91.32267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 19 REMARK 465 HIS A 20 REMARK 465 HIS A 21 REMARK 465 HIS A 22 REMARK 465 HIS A 23 REMARK 465 HIS A 24 REMARK 465 GLY A 25 REMARK 465 PRO A 26 REMARK 465 LEU A 27 REMARK 465 VAL A 28 REMARK 465 ASP A 29 REMARK 465 VAL A 30 REMARK 465 ALA A 31 REMARK 465 SER A 32 REMARK 465 ASN A 33 REMARK 465 GLU A 34 REMARK 465 GLN A 35 REMARK 465 LYS A 36 REMARK 465 LEU A 37 REMARK 465 ILE A 38 REMARK 465 SER A 39 REMARK 465 GLU A 40 REMARK 465 GLU A 41 REMARK 465 ASP A 42 REMARK 465 LEU A 43 REMARK 465 ALA A 44 REMARK 465 SER A 45 REMARK 465 MET A 46 REMARK 465 THR A 47 REMARK 465 GLY A 48 REMARK 465 GLY A 49 REMARK 465 GLN A 50 REMARK 465 GLN A 51 REMARK 465 MET A 52 REMARK 465 GLY A 53 REMARK 465 ARG A 54 REMARK 465 ASP A 55 REMARK 465 ILE A 56 REMARK 465 GLU A 57 REMARK 465 GLY A 58 REMARK 465 ARG A 59 REMARK 465 TRP A 60 REMARK 465 GLY A 61 REMARK 465 GLN A 62 REMARK 465 VAL A 63 REMARK 465 GLN A 64 REMARK 465 PRO A 65 REMARK 465 LYS A 66 REMARK 465 ASP A 67 REMARK 465 VAL A 68 REMARK 465 PRO A 69 REMARK 465 ARG A 70 REMARK 465 SER A 71 REMARK 465 TRP A 72 REMARK 465 GLU A 73 REMARK 465 HIS A 74 REMARK 465 GLY A 75 REMARK 465 SER A 76 REMARK 465 SER A 77 REMARK 465 PRO A 78 REMARK 465 ALA A 79 REMARK 465 TRP A 80 REMARK 465 GLU A 81 REMARK 465 PRO A 82 REMARK 465 LEU A 83 REMARK 465 GLU A 84 REMARK 465 ALA A 85 REMARK 465 GLU A 86 REMARK 465 ALA A 87 REMARK 465 ARG A 88 REMARK 465 GLN A 89 REMARK 465 GLN A 90 REMARK 465 ARG A 91 REMARK 465 ASP A 92 REMARK 465 SER A 93 REMARK 465 SER A 108 REMARK 465 ALA A 109 REMARK 465 ALA A 110 REMARK 465 ILE A 172 REMARK 465 SER A 173 REMARK 465 GLY A 294 REMARK 465 LEU A 295 REMARK 465 PHE A 296 REMARK 465 ASP A 297 REMARK 465 ASN A 417 REMARK 465 HIS A 418 REMARK 465 SER A 463 REMARK 465 PRO A 464 REMARK 465 GLY A 465 REMARK 465 ALA A 466 REMARK 465 GLN A 467 REMARK 465 PRO A 468 REMARK 465 ALA A 469 REMARK 465 GLY A 470 REMARK 465 ALA A 471 REMARK 465 GLY A 506 REMARK 465 HIS B 19 REMARK 465 HIS B 20 REMARK 465 HIS B 21 REMARK 465 HIS B 22 REMARK 465 HIS B 23 REMARK 465 HIS B 24 REMARK 465 GLY B 25 REMARK 465 PRO B 26 REMARK 465 LEU B 27 REMARK 465 VAL B 28 REMARK 465 ASP B 29 REMARK 465 VAL B 30 REMARK 465 ALA B 31 REMARK 465 SER B 32 REMARK 465 ASN B 33 REMARK 465 GLU B 34 REMARK 465 GLN B 35 REMARK 465 LYS B 36 REMARK 465 LEU B 37 REMARK 465 ILE B 38 REMARK 465 SER B 39 REMARK 465 GLU B 40 REMARK 465 GLU B 41 REMARK 465 ASP B 42 REMARK 465 LEU B 43 REMARK 465 ALA B 44 REMARK 465 SER B 45 REMARK 465 MET B 46 REMARK 465 THR B 47 REMARK 465 GLY B 48 REMARK 465 GLY B 49 REMARK 465 GLN B 50 REMARK 465 GLN B 51 REMARK 465 MET B 52 REMARK 465 GLY B 53 REMARK 465 ARG B 54 REMARK 465 ASP B 55 REMARK 465 ILE B 56 REMARK 465 GLU B 57 REMARK 465 GLY B 58 REMARK 465 ARG B 59 REMARK 465 TRP B 60 REMARK 465 GLY B 61 REMARK 465 GLN B 62 REMARK 465 VAL B 63 REMARK 465 GLN B 64 REMARK 465 PRO B 65 REMARK 465 LYS B 66 REMARK 465 ASP B 67 REMARK 465 VAL B 68 REMARK 465 PRO B 69 REMARK 465 ARG B 70 REMARK 465 SER B 71 REMARK 465 TRP B 72 REMARK 465 GLU B 73 REMARK 465 HIS B 74 REMARK 465 GLY B 75 REMARK 465 SER B 76 REMARK 465 SER B 77 REMARK 465 PRO B 78 REMARK 465 ALA B 79 REMARK 465 TRP B 80 REMARK 465 GLU B 81 REMARK 465 PRO B 82 REMARK 465 LEU B 83 REMARK 465 GLU B 84 REMARK 465 ALA B 85 REMARK 465 GLU B 86 REMARK 465 ALA B 87 REMARK 465 ARG B 88 REMARK 465 GLN B 89 REMARK 465 GLN B 90 REMARK 465 ARG B 91 REMARK 465 ASP B 92 REMARK 465 SER B 93 REMARK 465 SER B 108 REMARK 465 ALA B 109 REMARK 465 ALA B 110 REMARK 465 ILE B 172 REMARK 465 SER B 173 REMARK 465 LEU B 295 REMARK 465 PHE B 296 REMARK 465 ASP B 297 REMARK 465 GLY B 298 REMARK 465 VAL B 299 REMARK 465 GLN B 462 REMARK 465 SER B 463 REMARK 465 PRO B 464 REMARK 465 GLY B 465 REMARK 465 ALA B 466 REMARK 465 GLN B 467 REMARK 465 PRO B 468 REMARK 465 ALA B 469 REMARK 465 GLY B 470 REMARK 465 ALA B 471 REMARK 465 GLY B 506 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA B 184 CB REMARK 470 VAL B 426 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 201 O TRP A 265 2.13 REMARK 500 O ASP B 233 OG SER B 236 2.15 REMARK 500 OG SER A 398 O VAL A 406 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 103 C - N - CD ANGL. DEV. = -14.7 DEGREES REMARK 500 ARG B 425 CA - CB - CG ANGL. DEV. = -18.1 DEGREES REMARK 500 DT C 2 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT D 3 O4' - C1' - N1 ANGL. DEV. = 4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 103 -169.26 -72.95 REMARK 500 GLN A 104 75.76 -61.48 REMARK 500 SER A 179 -169.82 -126.30 REMARK 500 PRO A 181 82.94 -64.33 REMARK 500 ARG A 210 -7.25 67.21 REMARK 500 ASP A 221 12.84 58.52 REMARK 500 LYS A 271 43.65 39.87 REMARK 500 PRO A 300 55.27 -90.21 REMARK 500 PRO A 344 44.52 -80.92 REMARK 500 GLN A 496 52.37 37.29 REMARK 500 ASP A 501 71.80 -105.30 REMARK 500 PRO B 103 -169.14 -73.09 REMARK 500 ASP B 105 -133.89 76.31 REMARK 500 LEU B 106 71.89 54.85 REMARK 500 SER B 152 -6.30 70.05 REMARK 500 PRO B 181 85.56 -63.94 REMARK 500 ARG B 210 -2.69 67.20 REMARK 500 ASP B 221 12.75 57.66 REMARK 500 ASN B 249 -62.59 68.35 REMARK 500 CYS B 250 79.25 -53.24 REMARK 500 GLU B 333 -40.52 -136.38 REMARK 500 PRO B 344 44.24 -79.77 REMARK 500 LEU B 381 -9.65 71.87 REMARK 500 PHE B 423 61.86 -100.92 REMARK 500 ARG B 425 62.95 60.72 REMARK 500 SER B 451 -31.16 -132.12 REMARK 500 ALA B 497 85.93 54.07 REMARK 500 REMARK 500 REMARK: NULL DBREF 8V08 A 60 506 UNP Q96BZ4 PLD4_HUMAN 60 506 DBREF 8V08 B 60 506 UNP Q96BZ4 PLD4_HUMAN 60 506 DBREF 8V08 C 1 3 PDB 8V08 8V08 1 3 DBREF 8V08 D 1 3 PDB 8V08 8V08 1 3 SEQADV 8V08 HIS A 19 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 HIS A 20 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 HIS A 21 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 HIS A 22 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 HIS A 23 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 HIS A 24 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLY A 25 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 PRO A 26 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 LEU A 27 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 VAL A 28 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ASP A 29 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 VAL A 30 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ALA A 31 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 SER A 32 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ASN A 33 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLU A 34 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLN A 35 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 LYS A 36 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 LEU A 37 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ILE A 38 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 SER A 39 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLU A 40 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLU A 41 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ASP A 42 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 LEU A 43 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ALA A 44 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 SER A 45 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 MET A 46 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 THR A 47 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLY A 48 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLY A 49 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLN A 50 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLN A 51 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 MET A 52 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLY A 53 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ARG A 54 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ASP A 55 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ILE A 56 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLU A 57 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLY A 58 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ARG A 59 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 HIS B 19 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 HIS B 20 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 HIS B 21 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 HIS B 22 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 HIS B 23 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 HIS B 24 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLY B 25 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 PRO B 26 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 LEU B 27 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 VAL B 28 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ASP B 29 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 VAL B 30 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ALA B 31 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 SER B 32 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ASN B 33 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLU B 34 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLN B 35 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 LYS B 36 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 LEU B 37 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ILE B 38 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 SER B 39 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLU B 40 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLU B 41 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ASP B 42 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 LEU B 43 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ALA B 44 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 SER B 45 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 MET B 46 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 THR B 47 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLY B 48 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLY B 49 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLN B 50 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLN B 51 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 MET B 52 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLY B 53 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ARG B 54 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ASP B 55 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ILE B 56 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLU B 57 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 GLY B 58 UNP Q96BZ4 EXPRESSION TAG SEQADV 8V08 ARG B 59 UNP Q96BZ4 EXPRESSION TAG SEQRES 1 A 488 HIS HIS HIS HIS HIS HIS GLY PRO LEU VAL ASP VAL ALA SEQRES 2 A 488 SER ASN GLU GLN LYS LEU ILE SER GLU GLU ASP LEU ALA SEQRES 3 A 488 SER MET THR GLY GLY GLN GLN MET GLY ARG ASP ILE GLU SEQRES 4 A 488 GLY ARG TRP GLY GLN VAL GLN PRO LYS ASP VAL PRO ARG SEQRES 5 A 488 SER TRP GLU HIS GLY SER SER PRO ALA TRP GLU PRO LEU SEQRES 6 A 488 GLU ALA GLU ALA ARG GLN GLN ARG ASP SER CYS GLN LEU SEQRES 7 A 488 VAL LEU VAL GLU SER ILE PRO GLN ASP LEU PRO SER ALA SEQRES 8 A 488 ALA GLY SER PRO SER ALA GLN PRO LEU GLY GLN ALA TRP SEQRES 9 A 488 LEU GLN LEU LEU ASP THR ALA GLN GLU SER VAL HIS VAL SEQRES 10 A 488 ALA SER TYR TYR TRP SER LEU THR GLY PRO ASP ILE GLY SEQRES 11 A 488 VAL ASN ASP SER SER SER GLN LEU GLY GLU ALA LEU LEU SEQRES 12 A 488 GLN LYS LEU GLN GLN LEU LEU GLY ARG ASN ILE SER LEU SEQRES 13 A 488 ALA VAL ALA THR SER SER PRO THR LEU ALA ARG THR SER SEQRES 14 A 488 THR ASP LEU GLN VAL LEU ALA ALA ARG GLY ALA HIS VAL SEQRES 15 A 488 ARG GLN VAL PRO MET GLY ARG LEU THR ARG GLY VAL LEU SEQRES 16 A 488 HIS SER LYS PHE TRP VAL VAL ASP GLY ARG HIS ILE TYR SEQRES 17 A 488 MET GLY SER ALA ASN MET ASP TRP ARG SER LEU THR GLN SEQRES 18 A 488 VAL LYS GLU LEU GLY ALA VAL ILE TYR ASN CYS SER HIS SEQRES 19 A 488 LEU ALA GLN ASP LEU GLU LYS THR PHE GLN THR TYR TRP SEQRES 20 A 488 VAL LEU GLY VAL PRO LYS ALA VAL LEU PRO LYS THR TRP SEQRES 21 A 488 PRO GLN ASN PHE SER SER HIS PHE ASN ARG PHE GLN PRO SEQRES 22 A 488 PHE HIS GLY LEU PHE ASP GLY VAL PRO THR THR ALA TYR SEQRES 23 A 488 PHE SER ALA SER PRO PRO ALA LEU CYS PRO GLN GLY ARG SEQRES 24 A 488 THR ARG ASP LEU GLU ALA LEU LEU ALA VAL MET GLY SER SEQRES 25 A 488 ALA GLN GLU PHE ILE TYR ALA SER VAL MET GLU TYR PHE SEQRES 26 A 488 PRO THR THR ARG PHE SER HIS PRO PRO ARG TYR TRP PRO SEQRES 27 A 488 VAL LEU ASP ASN ALA LEU ARG ALA ALA ALA PHE GLY LYS SEQRES 28 A 488 GLY VAL ARG VAL ARG LEU LEU VAL GLY CYS GLY LEU ASN SEQRES 29 A 488 THR ASP PRO THR MET PHE PRO TYR LEU ARG SER LEU GLN SEQRES 30 A 488 ALA LEU SER ASN PRO ALA ALA ASN VAL SER VAL ASP VAL SEQRES 31 A 488 LYS VAL PHE ILE VAL PRO VAL GLY ASN HIS SER ASN ILE SEQRES 32 A 488 PRO PHE SER ARG VAL ASN NEP SER LYS PHE MET VAL THR SEQRES 33 A 488 GLU LYS ALA ALA TYR ILE GLY THR SER ASN TRP SER GLU SEQRES 34 A 488 ASP TYR PHE SER SER THR ALA GLY VAL GLY LEU VAL VAL SEQRES 35 A 488 THR GLN SER PRO GLY ALA GLN PRO ALA GLY ALA THR VAL SEQRES 36 A 488 GLN GLU GLN LEU ARG GLN LEU PHE GLU ARG ASP TRP SER SEQRES 37 A 488 SER ARG TYR ALA VAL GLY LEU ASP GLY GLN ALA PRO GLY SEQRES 38 A 488 GLN ASP CYS VAL TRP GLN GLY SEQRES 1 B 488 HIS HIS HIS HIS HIS HIS GLY PRO LEU VAL ASP VAL ALA SEQRES 2 B 488 SER ASN GLU GLN LYS LEU ILE SER GLU GLU ASP LEU ALA SEQRES 3 B 488 SER MET THR GLY GLY GLN GLN MET GLY ARG ASP ILE GLU SEQRES 4 B 488 GLY ARG TRP GLY GLN VAL GLN PRO LYS ASP VAL PRO ARG SEQRES 5 B 488 SER TRP GLU HIS GLY SER SER PRO ALA TRP GLU PRO LEU SEQRES 6 B 488 GLU ALA GLU ALA ARG GLN GLN ARG ASP SER CYS GLN LEU SEQRES 7 B 488 VAL LEU VAL GLU SER ILE PRO GLN ASP LEU PRO SER ALA SEQRES 8 B 488 ALA GLY SER PRO SER ALA GLN PRO LEU GLY GLN ALA TRP SEQRES 9 B 488 LEU GLN LEU LEU ASP THR ALA GLN GLU SER VAL HIS VAL SEQRES 10 B 488 ALA SER TYR TYR TRP SER LEU THR GLY PRO ASP ILE GLY SEQRES 11 B 488 VAL ASN ASP SER SER SER GLN LEU GLY GLU ALA LEU LEU SEQRES 12 B 488 GLN LYS LEU GLN GLN LEU LEU GLY ARG ASN ILE SER LEU SEQRES 13 B 488 ALA VAL ALA THR SER SER PRO THR LEU ALA ARG THR SER SEQRES 14 B 488 THR ASP LEU GLN VAL LEU ALA ALA ARG GLY ALA HIS VAL SEQRES 15 B 488 ARG GLN VAL PRO MET GLY ARG LEU THR ARG GLY VAL LEU SEQRES 16 B 488 HIS SER LYS PHE TRP VAL VAL ASP GLY ARG HIS ILE TYR SEQRES 17 B 488 MET GLY SER ALA ASN MET ASP TRP ARG SER LEU THR GLN SEQRES 18 B 488 VAL LYS GLU LEU GLY ALA VAL ILE TYR ASN CYS SER HIS SEQRES 19 B 488 LEU ALA GLN ASP LEU GLU LYS THR PHE GLN THR TYR TRP SEQRES 20 B 488 VAL LEU GLY VAL PRO LYS ALA VAL LEU PRO LYS THR TRP SEQRES 21 B 488 PRO GLN ASN PHE SER SER HIS PHE ASN ARG PHE GLN PRO SEQRES 22 B 488 PHE HIS GLY LEU PHE ASP GLY VAL PRO THR THR ALA TYR SEQRES 23 B 488 PHE SER ALA SER PRO PRO ALA LEU CYS PRO GLN GLY ARG SEQRES 24 B 488 THR ARG ASP LEU GLU ALA LEU LEU ALA VAL MET GLY SER SEQRES 25 B 488 ALA GLN GLU PHE ILE TYR ALA SER VAL MET GLU TYR PHE SEQRES 26 B 488 PRO THR THR ARG PHE SER HIS PRO PRO ARG TYR TRP PRO SEQRES 27 B 488 VAL LEU ASP ASN ALA LEU ARG ALA ALA ALA PHE GLY LYS SEQRES 28 B 488 GLY VAL ARG VAL ARG LEU LEU VAL GLY CYS GLY LEU ASN SEQRES 29 B 488 THR ASP PRO THR MET PHE PRO TYR LEU ARG SER LEU GLN SEQRES 30 B 488 ALA LEU SER ASN PRO ALA ALA ASN VAL SER VAL ASP VAL SEQRES 31 B 488 LYS VAL PHE ILE VAL PRO VAL GLY ASN HIS SER ASN ILE SEQRES 32 B 488 PRO PHE SER ARG VAL ASN HIS SER LYS PHE MET VAL THR SEQRES 33 B 488 GLU LYS ALA ALA TYR ILE GLY THR SER ASN TRP SER GLU SEQRES 34 B 488 ASP TYR PHE SER SER THR ALA GLY VAL GLY LEU VAL VAL SEQRES 35 B 488 THR GLN SER PRO GLY ALA GLN PRO ALA GLY ALA THR VAL SEQRES 36 B 488 GLN GLU GLN LEU ARG GLN LEU PHE GLU ARG ASP TRP SER SEQRES 37 B 488 SER ARG TYR ALA VAL GLY LEU ASP GLY GLN ALA PRO GLY SEQRES 38 B 488 GLN ASP CYS VAL TRP GLN GLY SEQRES 1 C 3 DT DT DT SEQRES 1 D 3 DT DT DT MODRES 8V08 NEP A 428 HIS MODIFIED RESIDUE HET NEP A 428 14 HETNAM NEP N1-PHOSPHONOHISTIDINE FORMUL 1 NEP C6 H10 N3 O5 P HELIX 1 AA1 LEU A 118 ALA A 129 1 12 HELIX 2 AA2 SER A 153 ARG A 170 1 18 HELIX 3 AA3 THR A 188 ALA A 195 1 8 HELIX 4 AA4 PRO A 204 ARG A 210 1 7 HELIX 5 AA5 TRP A 234 GLN A 239 1 6 HELIX 6 AA6 CYS A 250 HIS A 252 5 3 HELIX 7 AA7 LEU A 253 GLY A 268 1 16 HELIX 8 AA8 PRO A 309 CYS A 313 5 5 HELIX 9 AA9 ARG A 319 ALA A 331 1 13 HELIX 10 AB1 PRO A 356 LYS A 369 1 14 HELIX 11 AB2 THR A 386 ALA A 396 1 11 HELIX 12 AB3 LEU A 397 SER A 398 5 2 HELIX 13 AB4 ASN A 399 ASN A 403 5 5 HELIX 14 AB5 VAL A 473 SER A 486 1 14 HELIX 15 AB6 LEU B 118 ALA B 129 1 12 HELIX 16 AB7 SER B 154 ARG B 170 1 17 HELIX 17 AB8 THR B 188 GLY B 197 1 10 HELIX 18 AB9 PRO B 204 ARG B 210 1 7 HELIX 19 AC1 TRP B 234 GLN B 239 1 6 HELIX 20 AC2 CYS B 250 LEU B 267 1 18 HELIX 21 AC3 PRO B 309 CYS B 313 5 5 HELIX 22 AC4 ARG B 319 ALA B 331 1 13 HELIX 23 AC5 PRO B 356 LYS B 369 1 14 HELIX 24 AC6 THR B 386 ALA B 396 1 11 HELIX 25 AC7 LEU B 397 SER B 398 5 2 HELIX 26 AC8 ASN B 399 ASN B 403 5 5 HELIX 27 AC9 VAL B 473 SER B 486 1 14 SHEET 1 AA1 8 GLN A 116 PRO A 117 0 SHEET 2 AA1 8 GLN A 95 SER A 101 1 N GLU A 100 O GLN A 116 SHEET 3 AA1 8 GLU A 242 TYR A 248 -1 O VAL A 246 N VAL A 97 SHEET 4 AA1 8 HIS A 224 GLY A 228 -1 N ILE A 225 O ILE A 247 SHEET 5 AA1 8 PHE A 217 VAL A 220 -1 N VAL A 220 O HIS A 224 SHEET 6 AA1 8 VAL A 133 ALA A 136 -1 N ALA A 136 O PHE A 217 SHEET 7 AA1 8 ALA A 175 SER A 179 1 O VAL A 176 N VAL A 135 SHEET 8 AA1 8 HIS A 199 GLN A 202 1 O HIS A 199 N ALA A 177 SHEET 1 AA2 2 TRP A 140 SER A 141 0 SHEET 2 AA2 2 MET A 232 ASP A 233 1 O MET A 232 N SER A 141 SHEET 1 AA3 8 THR A 302 SER A 308 0 SHEET 2 AA3 8 GLY A 455 THR A 461 -1 O THR A 461 N THR A 302 SHEET 3 AA3 8 ALA A 437 GLY A 441 -1 N ILE A 440 O LEU A 458 SHEET 4 AA3 8 PHE A 431 VAL A 433 -1 N MET A 432 O TYR A 439 SHEET 5 AA3 8 PHE A 334 VAL A 339 -1 N SER A 338 O PHE A 431 SHEET 6 AA3 8 ARG A 372 CYS A 379 1 O LEU A 376 N ALA A 337 SHEET 7 AA3 8 SER A 405 ILE A 412 1 O SER A 405 N VAL A 373 SHEET 8 AA3 8 ALA A 490 GLY A 492 -1 O VAL A 491 N VAL A 410 SHEET 1 AA4 8 GLN B 116 PRO B 117 0 SHEET 2 AA4 8 GLN B 95 SER B 101 1 N GLU B 100 O GLN B 116 SHEET 3 AA4 8 GLU B 242 TYR B 248 -1 O VAL B 246 N VAL B 97 SHEET 4 AA4 8 HIS B 224 GLY B 228 -1 N MET B 227 O ALA B 245 SHEET 5 AA4 8 PHE B 217 VAL B 220 -1 N TRP B 218 O TYR B 226 SHEET 6 AA4 8 VAL B 133 ALA B 136 -1 N ALA B 136 O PHE B 217 SHEET 7 AA4 8 ALA B 175 SER B 179 1 O VAL B 176 N VAL B 135 SHEET 8 AA4 8 HIS B 199 GLN B 202 1 O HIS B 199 N ALA B 175 SHEET 1 AA5 2 TRP B 140 SER B 141 0 SHEET 2 AA5 2 MET B 232 ASP B 233 1 O MET B 232 N SER B 141 SHEET 1 AA6 8 THR B 302 SER B 308 0 SHEET 2 AA6 8 GLY B 455 THR B 461 -1 O VAL B 459 N TYR B 304 SHEET 3 AA6 8 ALA B 438 GLY B 441 -1 N ILE B 440 O LEU B 458 SHEET 4 AA6 8 PHE B 431 VAL B 433 -1 N MET B 432 O TYR B 439 SHEET 5 AA6 8 PHE B 334 VAL B 339 -1 N SER B 338 O PHE B 431 SHEET 6 AA6 8 ARG B 372 CYS B 379 1 O LEU B 376 N ALA B 337 SHEET 7 AA6 8 SER B 405 ILE B 412 1 O PHE B 411 N VAL B 377 SHEET 8 AA6 8 ALA B 490 VAL B 491 -1 O VAL B 491 N VAL B 410 SSBOND 1 CYS A 94 CYS A 250 1555 1555 2.03 SSBOND 2 CYS A 379 CYS A 502 1555 1555 2.03 SSBOND 3 CYS B 94 CYS B 250 1555 1555 2.04 SSBOND 4 CYS B 379 CYS B 502 1555 1555 2.03 LINK C ASN A 427 N NEP A 428 1555 1555 1.33 LINK C NEP A 428 N SER A 429 1555 1555 1.33 CISPEP 1 SER A 308 PRO A 309 0 2.87 CISPEP 2 SER B 308 PRO B 309 0 2.15 CRYST1 88.980 88.980 273.968 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011238 0.006489 0.000000 0.00000 SCALE2 0.000000 0.012977 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003650 0.00000