HEADER CELL CYCLE 19-NOV-23 8V10 TITLE STRUCTURE OF A SACCHAROMYCES CEREVISIAE MPS1 PEPTIDE BOUND TO DWARF TITLE 2 NDC80 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: KINETOCHORE PROTEIN NDC80; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: MPS1/NUF2 CHIMERA PROTEIN; COMPND 7 CHAIN: B; COMPND 8 EC: 2.7.12.2; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: KINETOCHORE PROTEIN SPC24; COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: KINETOCHORE PROTEIN SPC25; COMPND 16 CHAIN: D; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BREWER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: NDC80, HEC1, TID3, YIL144W; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 10 ORGANISM_COMMON: BREWER'S YEAST; SOURCE 11 ORGANISM_TAXID: 4932; SOURCE 12 GENE: MPS1, RPK1, YDL028C, D2785, NUF2, YOL069W; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 17 ORGANISM_COMMON: BREWER'S YEAST; SOURCE 18 ORGANISM_TAXID: 4932; SOURCE 19 GENE: SPC24, YMR117C, YM9718.16C; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 21 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 24 ORGANISM_COMMON: BREWER'S YEAST; SOURCE 25 ORGANISM_TAXID: 4932; SOURCE 26 GENE: SPC25, YER018C; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 28 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TENSION SENSING, NDC80, KINETOCHORE, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR J.A.ZAHM,S.C.HARRISON REVDAT 3 12-JUN-24 8V10 1 JRNL REVDAT 2 05-JUN-24 8V10 1 JRNL REVDAT 1 15-MAY-24 8V10 0 JRNL AUTH J.A.ZAHM,S.C.HARRISON JRNL TITL A COMMUNICATION HUB FOR PHOSPHOREGULATION OF JRNL TITL 2 KINETOCHORE-MICROTUBULE ATTACHMENT. JRNL REF CURR.BIOL. V. 34 2308 2024 JRNL REFN ISSN 0960-9822 JRNL PMID 38776904 JRNL DOI 10.1016/J.CUB.2024.04.067 REMARK 2 REMARK 2 RESOLUTION. 3.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 115.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 64.1 REMARK 3 NUMBER OF REFLECTIONS : 18002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.240 REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 900 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1115.1100 - 5.5000 1.00 4620 243 0.2326 0.2541 REMARK 3 2 5.4900 - 4.3600 1.00 4442 234 0.2188 0.2415 REMARK 3 3 4.3600 - 3.8100 0.95 4172 220 0.2339 0.2827 REMARK 3 4 3.8100 - 3.4600 0.61 2688 141 0.2844 0.3594 REMARK 3 5 3.4600 - 3.2100 0.23 997 52 0.3352 0.3359 REMARK 3 6 3.2100 - 3.0200 0.04 183 10 0.3725 0.2209 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.359 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.502 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 67.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 89.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 5818 REMARK 3 ANGLE : 0.349 7840 REMARK 3 CHIRALITY : 0.033 876 REMARK 3 PLANARITY : 0.002 1019 REMARK 3 DIHEDRAL : 4.262 755 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.5226 -20.3642 86.6720 REMARK 3 T TENSOR REMARK 3 T11: 1.1768 T22: 0.4035 REMARK 3 T33: 0.9483 T12: 0.2547 REMARK 3 T13: -0.0167 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 1.3518 L22: 2.7105 REMARK 3 L33: 1.0347 L12: 0.1749 REMARK 3 L13: 0.0931 L23: -0.3221 REMARK 3 S TENSOR REMARK 3 S11: 0.0360 S12: 0.2825 S13: 0.3556 REMARK 3 S21: -0.6661 S22: 0.1985 S23: -0.2308 REMARK 3 S31: -0.1910 S32: 0.1494 S33: -0.0730 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 248 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2425 14.1303 80.0285 REMARK 3 T TENSOR REMARK 3 T11: 0.9239 T22: 0.3701 REMARK 3 T33: 0.3474 T12: 0.2911 REMARK 3 T13: -0.0830 T23: 0.0549 REMARK 3 L TENSOR REMARK 3 L11: 2.3788 L22: 2.3103 REMARK 3 L33: 3.5549 L12: -0.3879 REMARK 3 L13: 2.4388 L23: -1.7681 REMARK 3 S TENSOR REMARK 3 S11: -0.0404 S12: 0.5911 S13: -0.0584 REMARK 3 S21: -0.5701 S22: -0.3516 S23: -0.2474 REMARK 3 S31: -0.0393 S32: 0.9105 S33: 0.3116 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 298 THROUGH 682 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8147 36.0519 40.6187 REMARK 3 T TENSOR REMARK 3 T11: 0.0635 T22: 0.2684 REMARK 3 T33: 0.3115 T12: -0.1325 REMARK 3 T13: -0.2485 T23: 0.1742 REMARK 3 L TENSOR REMARK 3 L11: 0.4705 L22: 0.5438 REMARK 3 L33: 0.8787 L12: -0.1130 REMARK 3 L13: 0.0547 L23: -0.3455 REMARK 3 S TENSOR REMARK 3 S11: -0.3460 S12: 0.3190 S13: 0.2944 REMARK 3 S21: 0.1285 S22: 0.0586 S23: 0.0933 REMARK 3 S31: -0.1567 S32: 0.2444 S33: -0.4761 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 151 THROUGH 1064 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5336 -0.2279 91.5980 REMARK 3 T TENSOR REMARK 3 T11: 1.1029 T22: 0.4714 REMARK 3 T33: 0.9659 T12: 0.1581 REMARK 3 T13: -0.0569 T23: 0.1984 REMARK 3 L TENSOR REMARK 3 L11: 0.8514 L22: 2.3656 REMARK 3 L33: 1.4050 L12: -0.0006 REMARK 3 L13: 0.2359 L23: -0.1412 REMARK 3 S TENSOR REMARK 3 S11: 0.1246 S12: -0.1965 S13: -0.3826 REMARK 3 S21: -0.0264 S22: 0.0055 S23: 0.2845 REMARK 3 S31: 0.3342 S32: -0.3071 S33: -0.0507 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1065 THROUGH 1140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6382 -5.2003 87.7493 REMARK 3 T TENSOR REMARK 3 T11: 1.0292 T22: 0.4578 REMARK 3 T33: 0.6501 T12: 0.4055 REMARK 3 T13: -0.1518 T23: 0.2409 REMARK 3 L TENSOR REMARK 3 L11: 1.4412 L22: 3.1790 REMARK 3 L33: 0.4029 L12: -1.1136 REMARK 3 L13: 0.2711 L23: 0.0683 REMARK 3 S TENSOR REMARK 3 S11: 0.3462 S12: 0.1495 S13: -0.4342 REMARK 3 S21: -0.4492 S22: -0.1265 S23: -0.1076 REMARK 3 S31: 0.1255 S32: 0.1527 S33: 0.1405 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1141 THROUGH 1451 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2635 27.7218 44.8098 REMARK 3 T TENSOR REMARK 3 T11: 0.1713 T22: 0.1004 REMARK 3 T33: 0.1860 T12: -0.0983 REMARK 3 T13: 0.0126 T23: 0.0703 REMARK 3 L TENSOR REMARK 3 L11: 0.5478 L22: 0.5652 REMARK 3 L33: 1.2543 L12: -0.0258 REMARK 3 L13: 0.1150 L23: -0.0823 REMARK 3 S TENSOR REMARK 3 S11: -0.2822 S12: 0.1999 S13: 0.0767 REMARK 3 S21: 0.0534 S22: 0.1514 S23: -0.0428 REMARK 3 S31: 0.1376 S32: -0.0718 S33: -0.1442 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 6 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.3059 39.9175 9.3574 REMARK 3 T TENSOR REMARK 3 T11: 0.0859 T22: 0.5077 REMARK 3 T33: 0.3506 T12: -0.2739 REMARK 3 T13: -0.0284 T23: 0.1816 REMARK 3 L TENSOR REMARK 3 L11: 0.4874 L22: 0.1636 REMARK 3 L33: 1.1090 L12: 0.0274 REMARK 3 L13: -0.2076 L23: -0.2448 REMARK 3 S TENSOR REMARK 3 S11: -0.0870 S12: 0.4399 S13: 0.1969 REMARK 3 S21: -0.0153 S22: -0.0087 S23: 0.1432 REMARK 3 S31: 0.0116 S32: -0.1917 S33: -0.0444 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 56 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0372 44.1534 -20.6061 REMARK 3 T TENSOR REMARK 3 T11: 0.6358 T22: 1.8166 REMARK 3 T33: 1.3681 T12: -0.1773 REMARK 3 T13: 0.1301 T23: 0.2829 REMARK 3 L TENSOR REMARK 3 L11: 3.7442 L22: 2.6452 REMARK 3 L33: 0.4858 L12: 0.2714 REMARK 3 L13: -0.8824 L23: -0.5877 REMARK 3 S TENSOR REMARK 3 S11: 0.2485 S12: -0.3834 S13: -0.2850 REMARK 3 S21: -0.0185 S22: -0.0684 S23: -0.4482 REMARK 3 S31: 0.0108 S32: 0.3759 S33: -0.1656 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6916 32.1643 17.2374 REMARK 3 T TENSOR REMARK 3 T11: 0.3253 T22: 0.5966 REMARK 3 T33: 0.2387 T12: -0.1625 REMARK 3 T13: 0.1134 T23: 0.1204 REMARK 3 L TENSOR REMARK 3 L11: 3.8247 L22: 3.2917 REMARK 3 L33: 6.6485 L12: -0.1116 REMARK 3 L13: -0.5465 L23: -1.6593 REMARK 3 S TENSOR REMARK 3 S11: -0.1645 S12: -0.0517 S13: -0.2413 REMARK 3 S21: -0.1040 S22: -0.1386 S23: -0.1251 REMARK 3 S31: 0.6605 S32: 0.2929 S33: 0.2799 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 27 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6540 51.3091 -19.3153 REMARK 3 T TENSOR REMARK 3 T11: 0.4247 T22: 1.1748 REMARK 3 T33: 0.4461 T12: -0.2500 REMARK 3 T13: -0.0646 T23: 0.4862 REMARK 3 L TENSOR REMARK 3 L11: 2.4110 L22: 0.4608 REMARK 3 L33: 1.8167 L12: -0.0657 REMARK 3 L13: 0.4190 L23: -0.4915 REMARK 3 S TENSOR REMARK 3 S11: 0.0423 S12: 0.0067 S13: 0.0706 REMARK 3 S21: 0.1439 S22: -0.0899 S23: -0.1076 REMARK 3 S31: -0.3336 S32: 0.4404 S33: 0.2477 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 63 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5959 52.6194 -33.1669 REMARK 3 T TENSOR REMARK 3 T11: 0.6423 T22: 1.3937 REMARK 3 T33: 0.6561 T12: -0.3053 REMARK 3 T13: -0.1977 T23: 0.4740 REMARK 3 L TENSOR REMARK 3 L11: 4.2374 L22: 5.3845 REMARK 3 L33: 2.1373 L12: -1.5858 REMARK 3 L13: -1.4844 L23: -1.5837 REMARK 3 S TENSOR REMARK 3 S11: -0.1526 S12: 0.2206 S13: -0.0176 REMARK 3 S21: -0.3489 S22: -0.0462 S23: -0.1854 REMARK 3 S31: -0.2963 S32: 0.2095 S33: 0.1447 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 84 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.5533 50.2193 -37.0097 REMARK 3 T TENSOR REMARK 3 T11: 0.6362 T22: 2.1680 REMARK 3 T33: 0.9084 T12: -0.0846 REMARK 3 T13: -0.0736 T23: 0.3080 REMARK 3 L TENSOR REMARK 3 L11: 3.5779 L22: 1.5497 REMARK 3 L33: 2.8513 L12: -1.2465 REMARK 3 L13: 1.4398 L23: -0.5627 REMARK 3 S TENSOR REMARK 3 S11: 0.3736 S12: 0.3008 S13: -0.1115 REMARK 3 S21: -0.4875 S22: -0.2128 S23: 0.5282 REMARK 3 S31: 0.0564 S32: 0.3864 S33: -0.1539 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8V10 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1000279316. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-23 REMARK 200 TEMPERATURE (KELVIN) : 77.36 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 2.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0309 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18187 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.020 REMARK 200 RESOLUTION RANGE LOW (A) : 115.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 65.0 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.15500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.40 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.85300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% POLYETHYLENE GLYCOL 8000, 1M REMARK 280 SODIUM CHLORIDE 100 MM PIPES PH 6.1, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 115.10700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 115.10700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.32850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 84.14750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.32850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 84.14750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 115.10700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.32850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 84.14750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 115.10700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.32850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 84.14750 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -150.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 111 REMARK 465 ASN A 112 REMARK 465 PHE A 683 REMARK 465 GLU A 684 REMARK 465 THR A 685 REMARK 465 GLU A 686 REMARK 465 HIS A 687 REMARK 465 ASN A 688 REMARK 465 VAL A 689 REMARK 465 THR A 690 REMARK 465 ASN A 691 REMARK 465 MET B 136 REMARK 465 ARG B 137 REMARK 465 GLN B 138 REMARK 465 ASN B 139 REMARK 465 MET B 140 REMARK 465 LYS B 141 REMARK 465 GLU B 142 REMARK 465 ASP B 143 REMARK 465 ILE B 144 REMARK 465 THR B 145 REMARK 465 ALA B 146 REMARK 465 LYS B 147 REMARK 465 TYR B 148 REMARK 465 ALA B 149 REMARK 465 GLU B 150 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 GLN C 3 REMARK 465 LYS C 4 REMARK 465 ASP C 5 REMARK 465 GLY C 99 REMARK 465 LYS C 100 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 250 -126.74 33.28 REMARK 500 TYR A 297 49.89 -93.73 REMARK 500 SER B 153 -13.44 68.01 REMARK 500 THR B 162 -72.54 -106.73 REMARK 500 ARG B1003 -76.65 -78.41 REMARK 500 ASN C 83 38.31 -75.37 REMARK 500 ASN C 84 -0.49 -140.49 REMARK 500 GLU C 96 -2.81 65.15 REMARK 500 ALA D 26 39.57 -151.81 REMARK 500 GLN D 29 -144.75 60.07 REMARK 500 ALA D 47 -12.41 65.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 801 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 648 NE2 REMARK 620 2 GLU D 11 OE2 96.2 REMARK 620 3 ASP D 49 OD1 96.8 39.9 REMARK 620 4 ASP D 49 OD2 98.7 40.1 2.0 REMARK 620 5 HIS D 51 ND1 98.1 37.7 2.6 2.5 REMARK 620 N 1 2 3 4 DBREF 8V10 A 114 318 UNP P40460 NDC80_YEAST 114 318 DBREF 8V10 A 621 691 UNP P40460 NDC80_YEAST 621 691 DBREF 8V10 B 137 171 UNP P54199 MPS1_YEAST 137 171 DBREF 8V10 B 1002 1153 UNP P33895 NUF2_YEAST 2 153 DBREF 8V10 B 1407 1451 UNP P33895 NUF2_YEAST 407 451 DBREF 8V10 C 1 48 UNP Q04477 SPC24_YEAST 1 48 DBREF 8V10 C 49 100 UNP Q04477 SPC24_YEAST 162 213 DBREF 8V10 D 1 31 UNP P40014 SPC25_YEAST 1 31 DBREF 8V10 D 32 115 UNP P40014 SPC25_YEAST 138 221 SEQADV 8V10 SER A 111 UNP P40460 EXPRESSION TAG SEQADV 8V10 ASN A 112 UNP P40460 EXPRESSION TAG SEQADV 8V10 ALA A 113 UNP P40460 EXPRESSION TAG SEQADV 8V10 MET B 136 UNP P54199 INITIATING METHIONINE SEQRES 1 A 279 SER ASN ALA ARG ASP PRO ARG PRO LEU ARG ASP LYS ASN SEQRES 2 A 279 PHE GLN SER ALA ILE GLN GLU GLU ILE TYR ASP TYR LEU SEQRES 3 A 279 LYS LYS ASN LYS PHE ASP ILE GLU THR ASN HIS PRO ILE SEQRES 4 A 279 SER ILE LYS PHE LEU LYS GLN PRO THR GLN LYS GLY PHE SEQRES 5 A 279 ILE ILE ILE PHE LYS TRP LEU TYR LEU ARG LEU ASP PRO SEQRES 6 A 279 GLY TYR GLY PHE THR LYS SER ILE GLU ASN GLU ILE TYR SEQRES 7 A 279 GLN ILE LEU LYS ASN LEU ARG TYR PRO PHE LEU GLU SER SEQRES 8 A 279 ILE ASN LYS SER GLN ILE SER ALA VAL GLY GLY SER ASN SEQRES 9 A 279 TRP HIS LYS PHE LEU GLY MET LEU HIS TRP MET VAL ARG SEQRES 10 A 279 THR ASN ILE LYS LEU ASP MET CYS LEU ASN LYS VAL ASP SEQRES 11 A 279 ARG SER LEU ILE ASN GLN ASN THR GLN GLU ILE THR ILE SEQRES 12 A 279 LEU SER GLN PRO LEU LYS THR LEU ASP GLU GLN ASP GLN SEQRES 13 A 279 ARG GLN GLU ARG TYR GLU LEU MET VAL GLU LYS LEU LEU SEQRES 14 A 279 ILE ASP TYR PHE THR GLU SER TYR LYS SER PHE LEU LYS SEQRES 15 A 279 LEU GLU ASP ASN TYR GLU PRO SER MET GLN GLU LEU LYS SEQRES 16 A 279 LEU GLY PHE GLU LYS PHE VAL HIS ILE ILE ASN THR ASP SEQRES 17 A 279 VAL THR SER THR GLU LEU LYS LEU GLU GLU LEU LYS VAL SEQRES 18 A 279 ASP LEU ASN ARG LYS ARG TYR LYS LEU HIS GLN GLN VAL SEQRES 19 A 279 ILE HIS VAL ILE ASP ILE THR SER LYS PHE LYS ILE ASN SEQRES 20 A 279 ILE GLN SER SER LEU GLU ASN SER GLU ASN GLU LEU GLY SEQRES 21 A 279 ASN VAL ILE GLU GLU LEU ARG ASN LEU GLU PHE GLU THR SEQRES 22 A 279 GLU HIS ASN VAL THR ASN SEQRES 1 B 233 MET ARG GLN ASN MET LYS GLU ASP ILE THR ALA LYS TYR SEQRES 2 B 233 ALA GLU ARG ARG SER LYS ARG PHE LEU ILE SER ASN ARG SEQRES 3 B 233 THR THR LYS LEU GLY PRO ALA LYS ARG ALA SER ARG ASN SEQRES 4 B 233 GLN ASP VAL PHE PRO ILE LEU ASP LEU GLN GLU LEU VAL SEQRES 5 B 233 ILE CYS LEU GLN SER CYS ASP PHE ALA LEU ALA THR GLN SEQRES 6 B 233 GLU ASN ILE SER ARG PRO THR SER ASP TYR MET VAL THR SEQRES 7 B 233 LEU TYR LYS GLN ILE ILE GLU ASN PHE MET GLY ILE SER SEQRES 8 B 233 VAL GLU SER LEU LEU ASN SER SER ASN GLN GLU THR GLY SEQRES 9 B 233 ASP GLY HIS LEU GLN GLU GLU ASN GLU ASN ILE TYR LEU SEQRES 10 B 233 ASP THR LEU ASN VAL LEU VAL LEU ASN LYS ILE CYS PHE SEQRES 11 B 233 LYS PHE PHE GLU ASN ILE GLY VAL GLN ASP PHE ASN MET SEQRES 12 B 233 THR ASP LEU TYR LYS PRO GLU ALA GLN ARG THR GLN ARG SEQRES 13 B 233 LEU LEU SER ALA VAL VAL ASN TYR ALA ARG PHE ARG GLU SEQRES 14 B 233 GLU ARG MET PHE ASP CYS ASN SER PHE ILE LEU GLN MET SEQRES 15 B 233 GLU SER LEU LEU GLY GLN ILE ASN LYS LEU ASN ASP GLU SEQRES 16 B 233 ILE LYS GLN LEU GLN LYS ASP PHE GLU VAL GLU VAL LYS SEQRES 17 B 233 GLU ILE GLU ILE GLU TYR SER LEU LEU SER GLY HIS ILE SEQRES 18 B 233 ASN LYS TYR MET ASN GLU MET LEU GLU TYR MET GLN SEQRES 1 C 100 MET SER GLN LYS ASP ASN LEU LEU ASP ASN PRO VAL GLU SEQRES 2 C 100 PHE LEU LYS GLU VAL ARG GLU SER PHE ASP ILE GLN GLN SEQRES 3 C 100 ASP VAL ASP ALA MET LYS ARG ILE ARG HIS ASP LEU ASP SEQRES 4 C 100 VAL ILE LYS GLU GLU SER GLU ALA ARG LEU LYS LEU TYR SEQRES 5 C 100 ARG SER LEU GLY VAL ILE LEU ASP LEU GLU ASN ASP GLN SEQRES 6 C 100 VAL LEU ILE ASN ARG LYS ASN ASP GLY ASN ILE ASP ILE SEQRES 7 C 100 LEU PRO LEU ASP ASN ASN LEU SER ASP PHE TYR LYS THR SEQRES 8 C 100 LYS TYR ILE TRP GLU ARG LEU GLY LYS SEQRES 1 D 115 MET ALA SER ILE ASP ALA PHE SER ASP LEU GLU ARG ARG SEQRES 2 D 115 MET ASP GLY PHE GLN LYS ASP VAL ALA GLN VAL LEU ALA SEQRES 3 D 115 ARG GLN GLN ASN HIS VAL ALA LEU TYR GLU ARG LEU LEU SEQRES 4 D 115 GLN LEU ARG VAL LEU PRO GLY ALA SER ASP VAL HIS ASP SEQRES 5 D 115 VAL ARG PHE VAL PHE GLY ASP ASP SER ARG CYS TRP ILE SEQRES 6 D 115 GLU VAL ALA MET HIS GLY ASP HIS VAL ILE GLY ASN SER SEQRES 7 D 115 HIS PRO ALA LEU ASP PRO LYS SER ARG ALA THR LEU GLU SEQRES 8 D 115 HIS VAL LEU THR VAL GLN GLY ASP LEU ALA ALA PHE LEU SEQRES 9 D 115 VAL VAL ALA ARG ASP MET LEU LEU ALA SER LEU HET NI A 801 1 HETNAM NI NICKEL (II) ION FORMUL 5 NI NI 2+ HELIX 1 AA1 ASP A 121 ASN A 139 1 19 HELIX 2 AA2 LYS A 140 ASN A 146 1 7 HELIX 3 AA3 SER A 150 GLN A 156 1 7 HELIX 4 AA4 THR A 158 ASP A 174 1 17 HELIX 5 AA5 ILE A 183 LEU A 194 1 12 HELIX 6 AA6 ASN A 203 SER A 208 5 6 HELIX 7 AA7 ASN A 214 GLN A 246 1 33 HELIX 8 AA8 GLN A 249 SER A 255 1 7 HELIX 9 AA9 THR A 260 LYS A 292 1 33 HELIX 10 AB1 TYR A 297 LEU A 681 1 83 HELIX 11 AB2 ASP B 1012 CYS B 1023 1 12 HELIX 12 AB3 GLN B 1030 ARG B 1035 1 6 HELIX 13 AB4 THR B 1037 MET B 1053 1 17 HELIX 14 AB5 SER B 1056 ASN B 1065 1 10 HELIX 15 AB6 GLN B 1074 GLY B 1102 1 29 HELIX 16 AB7 MET B 1108 LYS B 1113 1 6 HELIX 17 AB8 GLU B 1115 MET B 1137 1 23 HELIX 18 AB9 CYS B 1140 MET B 1450 1 58 HELIX 19 AC1 ASN C 10 SER C 21 1 12 HELIX 20 AC2 ILE C 24 SER C 54 1 31 HELIX 21 AC3 SER C 86 TRP C 95 1 10 HELIX 22 AC4 SER D 3 ASP D 5 5 3 HELIX 23 AC5 ALA D 6 LEU D 25 1 20 HELIX 24 AC6 HIS D 31 LEU D 39 1 9 HELIX 25 AC7 ASP D 83 VAL D 96 1 14 HELIX 26 AC8 ASP D 99 SER D 114 1 16 SHEET 1 AA1 3 VAL C 57 ASP C 60 0 SHEET 2 AA1 3 GLN C 65 ASN C 69 -1 O LEU C 67 N ILE C 58 SHEET 3 AA1 3 ILE C 76 PRO C 80 -1 O ASP C 77 N ILE C 68 SHEET 1 AA2 4 LEU D 41 PRO D 45 0 SHEET 2 AA2 4 VAL D 53 PHE D 57 -1 O ARG D 54 N LEU D 44 SHEET 3 AA2 4 CYS D 63 VAL D 67 -1 O ILE D 65 N PHE D 55 SHEET 4 AA2 4 ILE D 75 SER D 78 -1 O GLY D 76 N GLU D 66 SSBOND 1 CYS B 1019 CYS B 1023 1555 1555 2.04 LINK NE2 HIS A 648 NI NI A 801 1555 1555 2.01 LINK NI NI A 801 OE2 GLU D 11 1555 1555 2.31 LINK NI NI A 801 OD1 ASP D 49 8455 1555 2.03 LINK NI NI A 801 OD2 ASP D 49 8455 1555 2.53 LINK NI NI A 801 ND1 HIS D 51 8455 1555 2.11 CRYST1 72.657 168.295 230.214 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013763 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005942 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004344 0.00000