HEADER OXIDOREDUCTASE 27-NOV-23 8V36 TITLE CRYSTAL STRUCTURE OF DHPS-3-DEHYDROGENASE, HPSN FROM CUPRIAVIDUS TITLE 2 PINATUBONENSIS IN COMPLEX WITH NADH COMPND MOL_ID: 1; COMPND 2 MOLECULE: SULFOPROPANEDIOL 3-DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CUPRIAVIDUS PINATUBONENSIS JMP134; SOURCE 3 ORGANISM_TAXID: 264198; SOURCE 4 GENE: HPSN; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DHPS, SULFOLACTATE, DEHYDROGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.LEE REVDAT 1 25-SEP-24 8V36 0 JRNL AUTH L.BURCHILL,A.KAUR,A.NASTASOVICI,M.LEE,S.J.WILLIAMS JRNL TITL STRUCTURAL AND KINETIC INSIGHTS INTO THE STEREOSPECIFIC JRNL TITL 2 OXIDATION OF R -2,3-DIHYDROXYPROPANESULFONATE BY JRNL TITL 3 DHPS-3-DEHYDROGENASE FROM CUPRIAVIDUS PINATUBONENSIS. JRNL REF CHEM SCI 2024 JRNL REFN ISSN 2041-6520 JRNL PMID 39263660 JRNL DOI 10.1039/D4SC05114A REMARK 2 REMARK 2 RESOLUTION. 2.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0415 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 44674 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.061 REMARK 3 FREE R VALUE TEST SET COUNT : 2261 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.24 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.29 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2979 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.3630 REMARK 3 BIN FREE R VALUE SET COUNT : 156 REMARK 3 BIN FREE R VALUE : 0.3740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6268 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 90 REMARK 3 SOLVENT ATOMS : 82 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.42400 REMARK 3 B22 (A**2) : -1.04800 REMARK 3 B33 (A**2) : -4.37700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.315 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.249 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.270 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.074 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6483 ; 0.003 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 6096 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8826 ; 0.920 ; 1.656 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14004 ; 0.315 ; 1.576 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 825 ; 6.132 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 44 ; 5.439 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1011 ;13.322 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1013 ; 0.042 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7679 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1447 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1369 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 49 ; 0.222 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3183 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 193 ; 0.161 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.064 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3315 ; 3.802 ; 7.271 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3315 ; 3.802 ; 7.271 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4132 ; 6.150 ;13.052 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4133 ; 6.149 ;13.053 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3168 ; 3.544 ; 7.612 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3169 ; 3.543 ; 7.612 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4693 ; 5.891 ;13.873 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4694 ; 5.890 ;13.873 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8V36 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1000279446. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44738 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.235 REMARK 200 RESOLUTION RANGE LOW (A) : 44.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.13900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, MAGNESIUM CHLORIDE, PEG 4000, REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.65350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.09850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.77800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 67.09850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.65350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.77800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -133.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLN A 13 REMARK 465 THR A 14 REMARK 465 PRO A 362 REMARK 465 THR A 363 REMARK 465 LYS A 364 REMARK 465 GLY A 365 REMARK 465 ALA A 366 REMARK 465 ALA A 367 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 GLU B 9 REMARK 465 LYS B 10 REMARK 465 THR B 11 REMARK 465 PRO B 12 REMARK 465 GLN B 13 REMARK 465 THR B 14 REMARK 465 GLU B 15 REMARK 465 THR B 16 REMARK 465 ALA B 17 REMARK 465 THR B 18 REMARK 465 GLY B 215 REMARK 465 GLN B 216 REMARK 465 VAL B 217 REMARK 465 GLY B 218 REMARK 465 ILE B 219 REMARK 465 ASP B 220 REMARK 465 VAL B 221 REMARK 465 PHE B 222 REMARK 465 ALA B 223 REMARK 465 GLY B 224 REMARK 465 HIS B 359 REMARK 465 VAL B 360 REMARK 465 LEU B 361 REMARK 465 PRO B 362 REMARK 465 THR B 363 REMARK 465 LYS B 364 REMARK 465 GLY B 365 REMARK 465 ALA B 366 REMARK 465 ALA B 367 REMARK 465 ARG B 368 REMARK 465 TYR B 369 REMARK 465 SER B 370 REMARK 465 GLY B 371 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 20 CG CD OE1 NE2 REMARK 470 LYS B 21 CG CD CE NZ REMARK 470 ARG B 123 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 124 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN B 155 CG CD OE1 NE2 REMARK 470 ARG B 211 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 99 -122.79 -101.72 REMARK 500 PHE A 152 -70.37 -80.78 REMARK 500 HIS A 158 123.61 -39.70 REMARK 500 PHE A 190 -22.87 75.89 REMARK 500 ASP A 233 -165.68 -104.75 REMARK 500 HIS A 323 79.60 -104.80 REMARK 500 MET A 408 78.52 -112.90 REMARK 500 ASN A 425 67.51 -102.26 REMARK 500 LEU B 99 -119.92 -96.32 REMARK 500 LEU B 176 148.31 -170.23 REMARK 500 PHE B 190 -18.60 88.17 REMARK 500 SER B 226 -175.90 -67.45 REMARK 500 ASP B 233 -167.71 -113.81 REMARK 500 GLU B 250 1.19 -67.90 REMARK 500 MET B 408 78.49 -106.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 401 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 NAI A 502 REMARK 615 NAI B 501 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 126 NE2 REMARK 620 2 GLN A 248 OE1 173.5 REMARK 620 3 HIS A 251 NE2 87.0 88.8 REMARK 620 4 HOH A 618 O 93.7 81.4 91.3 REMARK 620 5 HIS B 411 NE2 93.8 91.4 92.5 171.8 REMARK 620 6 HOH B 635 O 88.7 95.3 175.0 86.6 90.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 411 NE2 REMARK 620 2 HIS B 126 NE2 88.6 REMARK 620 3 GLN B 248 OE1 96.0 166.5 REMARK 620 4 HIS B 251 NE2 94.4 89.1 103.2 REMARK 620 5 HOH B 632 O 91.2 87.4 79.9 173.2 REMARK 620 6 HOH B 636 O 177.4 92.1 83.8 83.1 91.3 REMARK 620 N 1 2 3 4 5 DBREF 8V36 A 1 436 UNP Q46N53 HPSN_CUPPJ 1 436 DBREF 8V36 B 1 436 UNP Q46N53 HPSN_CUPPJ 1 436 SEQADV 8V36 GLY A 0 UNP Q46N53 EXPRESSION TAG SEQADV 8V36 GLY B 0 UNP Q46N53 EXPRESSION TAG SEQRES 1 A 437 GLY MET ILE SER TYR LEU LYS LYS ALA GLU LYS THR PRO SEQRES 2 A 437 GLN THR GLU THR ALA THR ALA GLN LYS VAL VAL THR GLU SEQRES 3 A 437 MET LEU ALA GLU ILE GLN ALA ARG GLY LYS ASP ALA VAL SEQRES 4 A 437 ARG GLN TYR ALA LYS GLN LEU ASP GLY TRP SER GLY ASP SEQRES 5 A 437 ILE VAL LEU THR PRO ASP GLN ILE ARG GLU GLN THR LYS SEQRES 6 A 437 ASP VAL PRO ALA GLY VAL ARG ALA ASP ILE ASP PHE ALA SEQRES 7 A 437 ILE ARG GLN VAL THR ASP PHE ALA LEU ALA GLN ARG GLU SEQRES 8 A 437 SER LEU LYS GLU PHE SER VAL GLU LEU HIS PRO GLY VAL SEQRES 9 A 437 THR ALA GLY GLN ARG VAL LEU PRO VAL ASN VAL VAL GLY SEQRES 10 A 437 CYS TYR ALA PRO ALA GLY ARG TYR ALA HIS ILE ALA SER SEQRES 11 A 437 ALA TYR MET GLY VAL ALA THR ALA LYS ALA ALA GLY VAL SEQRES 12 A 437 LYS THR VAL VAL ALA CYS SER SER PRO PHE ARG GLY GLN SEQRES 13 A 437 GLY ILE HIS PRO HIS VAL LEU TYR ALA PHE GLN ALA ALA SEQRES 14 A 437 GLY ALA ASP VAL ILE MET ALA LEU GLY GLY VAL GLN ALA SEQRES 15 A 437 ILE ALA SER MET ALA TYR GLY LEU PHE THR GLY LYS PRO SEQRES 16 A 437 ALA ASP VAL VAL VAL GLY PRO GLY ASN LYS PHE VAL ALA SEQRES 17 A 437 GLU ALA LYS ARG SER LEU TYR GLY GLN VAL GLY ILE ASP SEQRES 18 A 437 VAL PHE ALA GLY PRO SER GLU VAL ALA VAL ILE ALA ASP SEQRES 19 A 437 GLU THR ALA ASP PRO ALA ILE VAL ALA SER ASP LEU VAL SEQRES 20 A 437 GLY GLN ALA GLU HIS GLY HIS GLU SER PRO ALA TRP LEU SEQRES 21 A 437 PHE THR THR SER ARG ASP LEU ALA ASP ARG VAL MET ALA SEQRES 22 A 437 LEU VAL PRO GLU LEU ILE ALA LYS LEU PRO PRO THR ALA SEQRES 23 A 437 ARG ASP ALA ALA THR ALA ALA TRP ARG ASP TYR GLY GLU SEQRES 24 A 437 VAL ILE LEU CYS GLY THR ARG GLU GLU VAL VAL GLU ILE SEQRES 25 A 437 SER ASP ARG TYR ALA SER GLU HIS LEU GLU VAL HIS THR SEQRES 26 A 437 ALA ASP LEU ASP TRP TRP LEU ALA ASN LEU THR CYS TYR SEQRES 27 A 437 GLY SER LEU PHE LEU GLY GLU GLU THR THR VAL ALA PHE SEQRES 28 A 437 GLY ASP LYS THR SER GLY PRO ASN HIS VAL LEU PRO THR SEQRES 29 A 437 LYS GLY ALA ALA ARG TYR SER GLY GLY LEU SER VAL HIS SEQRES 30 A 437 LYS PHE MET LYS THR LEU THR TRP GLN GLN MET THR ARG SEQRES 31 A 437 GLU ALA THR ARG GLN ILE GLY GLN VAL THR ALA ARG ILE SEQRES 32 A 437 SER ARG LEU GLU GLY MET GLU ALA HIS ALA ARG THR ALA SEQRES 33 A 437 ASP ASP ARG MET ALA LYS TYR PHE PRO ASN ALA SER PHE SEQRES 34 A 437 GLU MET GLY THR PRO VAL GLU VAL SEQRES 1 B 437 GLY MET ILE SER TYR LEU LYS LYS ALA GLU LYS THR PRO SEQRES 2 B 437 GLN THR GLU THR ALA THR ALA GLN LYS VAL VAL THR GLU SEQRES 3 B 437 MET LEU ALA GLU ILE GLN ALA ARG GLY LYS ASP ALA VAL SEQRES 4 B 437 ARG GLN TYR ALA LYS GLN LEU ASP GLY TRP SER GLY ASP SEQRES 5 B 437 ILE VAL LEU THR PRO ASP GLN ILE ARG GLU GLN THR LYS SEQRES 6 B 437 ASP VAL PRO ALA GLY VAL ARG ALA ASP ILE ASP PHE ALA SEQRES 7 B 437 ILE ARG GLN VAL THR ASP PHE ALA LEU ALA GLN ARG GLU SEQRES 8 B 437 SER LEU LYS GLU PHE SER VAL GLU LEU HIS PRO GLY VAL SEQRES 9 B 437 THR ALA GLY GLN ARG VAL LEU PRO VAL ASN VAL VAL GLY SEQRES 10 B 437 CYS TYR ALA PRO ALA GLY ARG TYR ALA HIS ILE ALA SER SEQRES 11 B 437 ALA TYR MET GLY VAL ALA THR ALA LYS ALA ALA GLY VAL SEQRES 12 B 437 LYS THR VAL VAL ALA CYS SER SER PRO PHE ARG GLY GLN SEQRES 13 B 437 GLY ILE HIS PRO HIS VAL LEU TYR ALA PHE GLN ALA ALA SEQRES 14 B 437 GLY ALA ASP VAL ILE MET ALA LEU GLY GLY VAL GLN ALA SEQRES 15 B 437 ILE ALA SER MET ALA TYR GLY LEU PHE THR GLY LYS PRO SEQRES 16 B 437 ALA ASP VAL VAL VAL GLY PRO GLY ASN LYS PHE VAL ALA SEQRES 17 B 437 GLU ALA LYS ARG SER LEU TYR GLY GLN VAL GLY ILE ASP SEQRES 18 B 437 VAL PHE ALA GLY PRO SER GLU VAL ALA VAL ILE ALA ASP SEQRES 19 B 437 GLU THR ALA ASP PRO ALA ILE VAL ALA SER ASP LEU VAL SEQRES 20 B 437 GLY GLN ALA GLU HIS GLY HIS GLU SER PRO ALA TRP LEU SEQRES 21 B 437 PHE THR THR SER ARG ASP LEU ALA ASP ARG VAL MET ALA SEQRES 22 B 437 LEU VAL PRO GLU LEU ILE ALA LYS LEU PRO PRO THR ALA SEQRES 23 B 437 ARG ASP ALA ALA THR ALA ALA TRP ARG ASP TYR GLY GLU SEQRES 24 B 437 VAL ILE LEU CYS GLY THR ARG GLU GLU VAL VAL GLU ILE SEQRES 25 B 437 SER ASP ARG TYR ALA SER GLU HIS LEU GLU VAL HIS THR SEQRES 26 B 437 ALA ASP LEU ASP TRP TRP LEU ALA ASN LEU THR CYS TYR SEQRES 27 B 437 GLY SER LEU PHE LEU GLY GLU GLU THR THR VAL ALA PHE SEQRES 28 B 437 GLY ASP LYS THR SER GLY PRO ASN HIS VAL LEU PRO THR SEQRES 29 B 437 LYS GLY ALA ALA ARG TYR SER GLY GLY LEU SER VAL HIS SEQRES 30 B 437 LYS PHE MET LYS THR LEU THR TRP GLN GLN MET THR ARG SEQRES 31 B 437 GLU ALA THR ARG GLN ILE GLY GLN VAL THR ALA ARG ILE SEQRES 32 B 437 SER ARG LEU GLU GLY MET GLU ALA HIS ALA ARG THR ALA SEQRES 33 B 437 ASP ASP ARG MET ALA LYS TYR PHE PRO ASN ALA SER PHE SEQRES 34 B 437 GLU MET GLY THR PRO VAL GLU VAL HET ZN A 501 1 HET NAI A 502 44 HET NAI B 501 44 HET ZN B 502 1 HETNAM ZN ZINC ION HETNAM NAI 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE HETSYN NAI NADH FORMUL 3 ZN 2(ZN 2+) FORMUL 4 NAI 2(C21 H29 N7 O14 P2) FORMUL 7 HOH *82(H2 O) HELIX 1 AA1 ALA A 17 GLY A 34 1 18 HELIX 2 AA2 GLY A 34 GLY A 47 1 14 HELIX 3 AA3 THR A 55 THR A 63 1 9 HELIX 4 AA4 PRO A 67 GLU A 90 1 24 HELIX 5 AA5 ILE A 127 GLY A 141 1 15 HELIX 6 AA6 HIS A 158 GLY A 169 1 12 HELIX 7 AA7 GLY A 177 GLY A 188 1 12 HELIX 8 AA8 ASN A 203 GLY A 215 1 13 HELIX 9 AA9 GLN A 216 ILE A 219 5 4 HELIX 10 AB1 ASP A 237 GLU A 250 1 14 HELIX 11 AB2 SER A 263 LYS A 280 1 18 HELIX 12 AB3 PRO A 282 GLY A 297 1 16 HELIX 13 AB4 THR A 304 ALA A 316 1 13 HELIX 14 AB5 ASP A 326 LEU A 334 1 9 HELIX 15 AB6 THR A 347 GLY A 351 5 5 HELIX 16 AB7 SER A 374 LYS A 377 5 4 HELIX 17 AB8 THR A 388 GLU A 406 1 19 HELIX 18 AB9 MET A 408 PHE A 423 1 16 HELIX 19 AC1 LYS B 21 GLY B 34 1 14 HELIX 20 AC2 GLY B 34 ASP B 46 1 13 HELIX 21 AC3 THR B 55 GLN B 62 1 8 HELIX 22 AC4 PRO B 67 GLU B 90 1 24 HELIX 23 AC5 ILE B 127 ALA B 140 1 14 HELIX 24 AC6 HIS B 158 GLY B 169 1 12 HELIX 25 AC7 GLY B 177 GLY B 188 1 12 HELIX 26 AC8 ASN B 203 TYR B 214 1 12 HELIX 27 AC9 ASP B 237 GLU B 250 1 14 HELIX 28 AD1 SER B 263 LYS B 280 1 18 HELIX 29 AD2 PRO B 282 TYR B 296 1 15 HELIX 30 AD3 THR B 304 ALA B 316 1 13 HELIX 31 AD4 ASP B 326 LEU B 334 1 9 HELIX 32 AD5 THR B 347 GLY B 351 5 5 HELIX 33 AD6 SER B 374 LYS B 377 5 4 HELIX 34 AD7 THR B 388 GLU B 406 1 19 HELIX 35 AD8 MET B 408 PHE B 423 1 16 SHEET 1 AA1 9 SER A 3 LYS A 6 0 SHEET 2 AA1 9 GLU A 298 LEU A 301 -1 O LEU A 301 N SER A 3 SHEET 3 AA1 9 ALA A 257 THR A 261 1 N LEU A 259 O ILE A 300 SHEET 4 AA1 9 VAL A 228 ALA A 232 1 N VAL A 228 O TRP A 258 SHEET 5 AA1 9 HIS A 319 HIS A 323 1 O GLU A 321 N ILE A 231 SHEET 6 AA1 9 SER A 339 LEU A 342 1 O PHE A 341 N LEU A 320 SHEET 7 AA1 9 MET B 379 MET B 387 1 O GLN B 385 N LEU A 342 SHEET 8 AA1 9 VAL B 103 PRO B 111 -1 N THR B 104 O GLN B 386 SHEET 9 AA1 9 PHE B 95 GLU B 98 -1 N VAL B 97 O ALA B 105 SHEET 1 AA2 9 PHE A 95 GLU A 98 0 SHEET 2 AA2 9 VAL A 103 PRO A 111 -1 O ALA A 105 N VAL A 97 SHEET 3 AA2 9 MET A 379 MET A 387 -1 O GLN A 386 N THR A 104 SHEET 4 AA2 9 SER B 339 LEU B 342 1 O LEU B 342 N GLN A 385 SHEET 5 AA2 9 HIS B 319 HIS B 323 1 N LEU B 320 O PHE B 341 SHEET 6 AA2 9 ALA B 229 ALA B 232 1 N ILE B 231 O HIS B 323 SHEET 7 AA2 9 TRP B 258 THR B 261 1 O PHE B 260 N VAL B 230 SHEET 8 AA2 9 GLU B 298 LEU B 301 1 O ILE B 300 N THR B 261 SHEET 9 AA2 9 SER B 3 LYS B 6 -1 N SER B 3 O LEU B 301 SHEET 1 AA3 4 VAL A 172 MET A 174 0 SHEET 2 AA3 4 THR A 144 CYS A 148 1 N ALA A 147 O VAL A 172 SHEET 3 AA3 4 VAL A 114 TYR A 118 1 N CYS A 117 O VAL A 146 SHEET 4 AA3 4 VAL A 197 VAL A 199 1 O VAL A 197 N GLY A 116 SHEET 1 AA4 4 VAL B 172 ALA B 175 0 SHEET 2 AA4 4 THR B 144 SER B 149 1 N ALA B 147 O MET B 174 SHEET 3 AA4 4 VAL B 114 ALA B 119 1 N CYS B 117 O CYS B 148 SHEET 4 AA4 4 VAL B 197 VAL B 199 1 O VAL B 197 N GLY B 116 LINK NE2 HIS A 126 ZN ZN A 501 1555 1555 2.20 LINK OE1 GLN A 248 ZN ZN A 501 1555 1555 2.17 LINK NE2 HIS A 251 ZN ZN A 501 1555 1555 2.24 LINK NE2 HIS A 411 ZN ZN B 502 1555 1555 2.35 LINK ZN ZN A 501 O HOH A 618 1555 1555 2.04 LINK ZN ZN A 501 NE2 HIS B 411 1555 1555 2.03 LINK ZN ZN A 501 O HOH B 635 1555 1555 2.09 LINK NE2 HIS B 126 ZN ZN B 502 1555 1555 2.18 LINK OE1 GLN B 248 ZN ZN B 502 1555 1555 2.35 LINK NE2 HIS B 251 ZN ZN B 502 1555 1555 2.08 LINK ZN ZN B 502 O HOH B 632 1555 1555 2.15 LINK ZN ZN B 502 O HOH B 636 1555 1555 2.34 CRYST1 77.307 87.556 134.197 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012935 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011421 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007452 0.00000