HEADER ALLERGEN 01-DEC-23 8V5Y TITLE CRYSTAL STRUCTURE OF TYR P 36.0101 IN COMPLEX WITH A POLY(L-PROLINE) TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROFILIN; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: POLY(L-PROLINE) PEPTIDE; COMPND 7 CHAIN: C; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TYROPHAGUS PUTRESCENTIAE; SOURCE 3 ORGANISM_TAXID: 59818; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 9 ORGANISM_TAXID: 32630 KEYWDS MITE PROFILIN, STORAGE MITE, ALLERGY, ALLERGEN, POLY(L-PROLINE) KEYWDS 2 PEPTIDE EXPDTA X-RAY DIFFRACTION AUTHOR A.O'MALLEY,M.CHRUSZCZ REVDAT 2 19-JUN-24 8V5Y 1 JRNL REVDAT 1 08-MAY-24 8V5Y 0 JRNL AUTH A.O'MALLEY,S.SANKARAN,A.CARRIUOLO,K.KHATRI,K.KOWAL, JRNL AUTH 2 M.CHRUSZCZ JRNL TITL STRUCTURAL HOMOLOGY OF MITE PROFILINS TO PLANT PROFILINS IS JRNL TITL 2 NOT INDICATIVE OF ALLERGIC CROSS-REACTIVITY. JRNL REF BIOL.CHEM. V. 405 367 2024 JRNL REFN ISSN 1431-6730 JRNL PMID 38662449 JRNL DOI 10.1515/HSZ-2023-0366 REMARK 2 REMARK 2 RESOLUTION. 2.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0419 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.1 REMARK 3 NUMBER OF REFLECTIONS : 13909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.997 REMARK 3 FREE R VALUE TEST SET COUNT : 695 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.06 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.11 REMARK 3 REFLECTION IN BIN (WORKING SET) : 655 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 60.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 32 REMARK 3 BIN FREE R VALUE : 0.2170 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2040 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.06100 REMARK 3 B22 (A**2) : 0.22300 REMARK 3 B33 (A**2) : -0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.09200 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.276 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.194 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.135 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.803 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2116 ; 0.006 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2004 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2882 ; 1.483 ; 1.795 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4619 ; 0.497 ; 1.760 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 275 ; 6.697 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 9 ; 7.516 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 346 ;12.628 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 325 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2535 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 469 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 430 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 82 ; 0.235 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1028 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 164 ; 0.171 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1085 ; 1.575 ; 1.675 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1085 ; 1.575 ; 1.675 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1353 ; 2.489 ; 3.002 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1354 ; 2.490 ; 3.002 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1031 ; 2.564 ; 2.072 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1016 ; 2.488 ; 2.020 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1525 ; 4.033 ; 3.641 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1502 ; 3.992 ; 3.548 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 1 B 130 NULL REMARK 3 1 B 1 B 130 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 131 REMARK 3 ORIGIN FOR THE GROUP (A): -17.4220 18.0210 0.9930 REMARK 3 T TENSOR REMARK 3 T11: 0.0027 T22: 0.0010 REMARK 3 T33: 0.0397 T12: -0.0013 REMARK 3 T13: 0.0065 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.4350 L22: 1.4142 REMARK 3 L33: 1.1195 L12: 0.2680 REMARK 3 L13: 0.0171 L23: -0.5793 REMARK 3 S TENSOR REMARK 3 S11: -0.0123 S12: 0.0155 S13: -0.0165 REMARK 3 S21: -0.0269 S22: 0.0093 S23: 0.0354 REMARK 3 S31: -0.0121 S32: 0.0125 S33: 0.0031 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): 3.8990 -0.0150 21.6860 REMARK 3 T TENSOR REMARK 3 T11: 0.0040 T22: 0.0043 REMARK 3 T33: 0.0522 T12: 0.0040 REMARK 3 T13: 0.0138 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.7177 L22: 1.4438 REMARK 3 L33: 0.3178 L12: -0.5325 REMARK 3 L13: -0.0446 L23: 0.2703 REMARK 3 S TENSOR REMARK 3 S11: 0.0176 S12: 0.0256 S13: 0.0211 REMARK 3 S21: -0.0126 S22: -0.0313 S23: -0.0289 REMARK 3 S31: -0.0023 S32: -0.0047 S33: 0.0138 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): -7.6290 9.5250 12.4750 REMARK 3 T TENSOR REMARK 3 T11: 0.0207 T22: 0.0196 REMARK 3 T33: 0.0669 T12: 0.0024 REMARK 3 T13: -0.0237 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 10.6529 L22: 8.6054 REMARK 3 L33: 1.0392 L12: 0.2443 REMARK 3 L13: -2.7252 L23: 1.6525 REMARK 3 S TENSOR REMARK 3 S11: -0.1603 S12: 0.1517 S13: 0.0175 REMARK 3 S21: -0.1319 S22: 0.1173 S23: 0.2317 REMARK 3 S31: 0.0165 S32: -0.0161 S33: 0.0430 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8V5Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-DEC-23. REMARK 100 THE DEPOSITION ID IS D_1000279596. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13911 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 65.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.21400 REMARK 200 R SYM FOR SHELL (I) : 0.21400 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M LITHIUM CITRATE PH 3.5, 2.0 M REMARK 280 AMMONIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.14450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.75900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.14450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.75900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 GLY B -14 REMARK 465 VAL B -13 REMARK 465 ASP B -12 REMARK 465 LEU B -11 REMARK 465 GLY B -10 REMARK 465 THR B -9 REMARK 465 GLU B -8 REMARK 465 ASN B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 SER B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 SER A -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN B 57 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 57 O HOH A 301 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 11 -60.50 -105.30 REMARK 500 LYS A 36 -96.30 -96.22 REMARK 500 ASN A 57 79.02 -153.66 REMARK 500 THR A 97 -158.98 -103.53 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8V5Y B 2 131 UNP A0A1B2YLJ4_TYRPU DBREF2 8V5Y B A0A1B2YLJ4 2 131 DBREF1 8V5Y A 2 131 UNP A0A1B2YLJ4_TYRPU DBREF2 8V5Y A A0A1B2YLJ4 2 131 DBREF 8V5Y C 1 6 PDB 8V5Y 8V5Y 1 6 SEQADV 8V5Y MET B -23 UNP A0A1B2YLJ INITIATING METHIONINE SEQADV 8V5Y HIS B -22 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y HIS B -21 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y HIS B -20 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y HIS B -19 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y HIS B -18 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y HIS B -17 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y SER B -16 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y SER B -15 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y GLY B -14 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y VAL B -13 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y ASP B -12 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y LEU B -11 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y GLY B -10 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y THR B -9 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y GLU B -8 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y ASN B -7 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y LEU B -6 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y TYR B -5 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y PHE B -4 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y GLN B -3 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y SER B -2 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y GLY B -1 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y SER B 0 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y GLY B 1 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y MET A -23 UNP A0A1B2YLJ INITIATING METHIONINE SEQADV 8V5Y HIS A -22 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y HIS A -21 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y HIS A -20 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y HIS A -19 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y HIS A -18 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y HIS A -17 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y SER A -16 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y SER A -15 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y GLY A -14 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y VAL A -13 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y ASP A -12 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y LEU A -11 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y GLY A -10 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y THR A -9 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y GLU A -8 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y ASN A -7 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y LEU A -6 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y TYR A -5 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y PHE A -4 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y GLN A -3 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y SER A -2 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y GLY A -1 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y SER A 0 UNP A0A1B2YLJ EXPRESSION TAG SEQADV 8V5Y GLY A 1 UNP A0A1B2YLJ EXPRESSION TAG SEQRES 1 B 155 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 155 GLY THR GLU ASN LEU TYR PHE GLN SER GLY SER GLY SER SEQRES 3 B 155 TRP GLN SER TYR VAL ASP ASN GLN ILE CYS GLN HIS VAL SEQRES 4 B 155 ASP CYS ARG LEU ALA VAL ILE ALA GLY LEU GLN ASP GLY SEQRES 5 B 155 ALA VAL TRP ALA LYS PHE GLU LYS ASP LEU PRO LYS GLN SEQRES 6 B 155 ILE THR GLN GLN GLU LEU LYS THR ILE ALA ASP ALA ILE SEQRES 7 B 155 ARG SER ASN PRO ASN SER PHE LEU GLU GLY GLY ILE HIS SEQRES 8 B 155 LEU GLY GLY GLU LYS TYR ILE CYS ILE GLN ALA ASP ASN SEQRES 9 B 155 SER LEU VAL ARG GLY ARG LYS GLY SER SER ALA LEU CYS SEQRES 10 B 155 ILE VAL ALA THR ASN THR CYS LEU LEU ALA ALA ALA THR SEQRES 11 B 155 VAL ASP GLY PHE PRO PRO GLY GLN LEU ASN ASN VAL VAL SEQRES 12 B 155 GLU LYS LEU GLY ASP TYR LEU LYS ALA ASN ASN TYR SEQRES 1 A 155 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 155 GLY THR GLU ASN LEU TYR PHE GLN SER GLY SER GLY SER SEQRES 3 A 155 TRP GLN SER TYR VAL ASP ASN GLN ILE CYS GLN HIS VAL SEQRES 4 A 155 ASP CYS ARG LEU ALA VAL ILE ALA GLY LEU GLN ASP GLY SEQRES 5 A 155 ALA VAL TRP ALA LYS PHE GLU LYS ASP LEU PRO LYS GLN SEQRES 6 A 155 ILE THR GLN GLN GLU LEU LYS THR ILE ALA ASP ALA ILE SEQRES 7 A 155 ARG SER ASN PRO ASN SER PHE LEU GLU GLY GLY ILE HIS SEQRES 8 A 155 LEU GLY GLY GLU LYS TYR ILE CYS ILE GLN ALA ASP ASN SEQRES 9 A 155 SER LEU VAL ARG GLY ARG LYS GLY SER SER ALA LEU CYS SEQRES 10 A 155 ILE VAL ALA THR ASN THR CYS LEU LEU ALA ALA ALA THR SEQRES 11 A 155 VAL ASP GLY PHE PRO PRO GLY GLN LEU ASN ASN VAL VAL SEQRES 12 A 155 GLU LYS LEU GLY ASP TYR LEU LYS ALA ASN ASN TYR SEQRES 1 C 6 PRO PRO PRO PRO PRO PRO HET SO4 B 201 5 HET SO4 B 202 5 HET SO4 B 203 5 HET SO4 A 201 5 HETNAM SO4 SULFATE ION FORMUL 4 SO4 4(O4 S 2-) FORMUL 8 HOH *220(H2 O) HELIX 1 AA1 GLY B 1 GLN B 10 1 10 HELIX 2 AA2 GLN B 10 VAL B 15 1 6 HELIX 3 AA3 THR B 43 ASN B 57 1 15 HELIX 4 AA4 ASN B 59 GLY B 65 1 7 HELIX 5 AA5 PRO B 111 ALA B 128 1 18 HELIX 6 AA6 SER A 2 ILE A 11 1 10 HELIX 7 AA7 THR A 43 ASN A 57 1 15 HELIX 8 AA8 PRO A 58 GLU A 63 5 6 HELIX 9 AA9 PRO A 111 ASN A 129 1 19 SHEET 1 AA1 7 VAL B 30 GLU B 35 0 SHEET 2 AA1 7 CYS B 17 GLY B 24 -1 N ILE B 22 O TRP B 31 SHEET 3 AA1 7 CYS B 100 THR B 106 -1 O ALA B 103 N VAL B 21 SHEET 4 AA1 7 SER B 90 ALA B 96 -1 N VAL B 95 O LEU B 102 SHEET 5 AA1 7 LEU B 82 LYS B 87 -1 N VAL B 83 O ILE B 94 SHEET 6 AA1 7 GLU B 71 ALA B 78 -1 N ILE B 74 O ARG B 86 SHEET 7 AA1 7 ILE B 66 LEU B 68 -1 N ILE B 66 O TYR B 73 SHEET 1 AA2 7 VAL A 30 GLU A 35 0 SHEET 2 AA2 7 CYS A 17 GLY A 24 -1 N ILE A 22 O TRP A 31 SHEET 3 AA2 7 CYS A 100 THR A 106 -1 O LEU A 101 N ALA A 23 SHEET 4 AA2 7 SER A 90 ALA A 96 -1 N VAL A 95 O LEU A 102 SHEET 5 AA2 7 LEU A 82 LYS A 87 -1 N VAL A 83 O ILE A 94 SHEET 6 AA2 7 GLU A 71 ALA A 78 -1 N ILE A 74 O ARG A 86 SHEET 7 AA2 7 ILE A 66 LEU A 68 -1 N ILE A 66 O TYR A 73 CRYST1 88.289 55.518 59.032 90.00 121.18 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011326 0.000000 0.006854 0.00000 SCALE2 0.000000 0.018012 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019800 0.00000