HEADER CELL INVASION 04-DEC-23 8V7Q TITLE IPAD (122-321) PI-HELIX MUTANT (DELTA Q148) APO STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: INVASIN IPAD; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHIGELLA FLEXNERI; SOURCE 3 ORGANISM_TAXID: 623; SOURCE 4 GENE: IPAD; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TYPE THREE SECRETION SYSTEM, T3SS, T3SA, SHIGELLA, PI HELIX, CELL KEYWDS 2 INVASION EXPDTA X-RAY DIFFRACTION AUTHOR S.A.BARKER,N.E.DICKENSON,S.J.JOHNSON REVDAT 1 21-AUG-24 8V7Q 0 JRNL AUTH S.A.BARKER,A.R.BERNARD,Y.MORALES,S.J.JOHNSON,N.E.DICKENSON JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF THE IPAD JRNL TITL 2 PI-HELIX REVEALS CRITICAL ROLES IN DOC INTERACTION, T3SS JRNL TITL 3 APPARATUS MATURATION, AND SHIGELLA VIRULENCE. JRNL REF J.BIOL.CHEM. 07613 2024 JRNL REFN ESSN 1083-351X JRNL PMID 39079629 JRNL DOI 10.1016/J.JBC.2024.107613 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 20672 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.258 REMARK 3 R VALUE (WORKING SET) : 0.257 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1031 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7370 - 5.7271 0.98 2928 158 0.1967 0.2044 REMARK 3 2 5.7271 - 4.5510 0.98 2866 154 0.2400 0.2804 REMARK 3 3 4.5510 - 3.9772 0.94 2764 142 0.2502 0.2851 REMARK 3 4 3.9772 - 3.6143 0.95 2785 147 0.2965 0.2879 REMARK 3 5 3.6143 - 3.3556 0.98 2870 149 0.3205 0.3457 REMARK 3 6 3.3556 - 3.1580 0.97 2777 145 0.3583 0.3627 REMARK 3 7 3.1580 - 3.0000 0.92 2651 136 0.3858 0.3608 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6096 REMARK 3 ANGLE : 0.408 8245 REMARK 3 CHIRALITY : 0.034 926 REMARK 3 PLANARITY : 0.003 1059 REMARK 3 DIHEDRAL : 1.723 3681 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7506 -4.4367 28.7848 REMARK 3 T TENSOR REMARK 3 T11: 0.7206 T22: 0.6870 REMARK 3 T33: 0.7217 T12: 0.0996 REMARK 3 T13: -0.1244 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 1.7577 L22: 3.9042 REMARK 3 L33: 5.4395 L12: 0.6115 REMARK 3 L13: 1.1934 L23: 4.4596 REMARK 3 S TENSOR REMARK 3 S11: 0.0717 S12: 0.0768 S13: -0.3487 REMARK 3 S21: 0.9615 S22: 0.3610 S23: -0.4335 REMARK 3 S31: 1.2828 S32: 0.4323 S33: -0.4337 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 243 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7876 -5.1177 18.6280 REMARK 3 T TENSOR REMARK 3 T11: 0.6356 T22: 0.6686 REMARK 3 T33: 0.7294 T12: 0.1568 REMARK 3 T13: -0.0984 T23: -0.1176 REMARK 3 L TENSOR REMARK 3 L11: 1.7194 L22: 4.2332 REMARK 3 L33: 4.4380 L12: 1.7086 REMARK 3 L13: 1.7628 L23: 3.9346 REMARK 3 S TENSOR REMARK 3 S11: -0.0035 S12: 0.2493 S13: -0.4237 REMARK 3 S21: -0.2288 S22: 0.2522 S23: -0.2754 REMARK 3 S31: 0.1671 S32: 0.4159 S33: -0.2331 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 124 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.1672 17.2430 62.7991 REMARK 3 T TENSOR REMARK 3 T11: 0.7776 T22: 0.4832 REMARK 3 T33: 0.5407 T12: -0.0364 REMARK 3 T13: 0.0485 T23: -0.0499 REMARK 3 L TENSOR REMARK 3 L11: 1.5642 L22: 0.5635 REMARK 3 L33: 4.7341 L12: 0.3261 REMARK 3 L13: -0.8080 L23: -0.3540 REMARK 3 S TENSOR REMARK 3 S11: -0.0825 S12: 0.2690 S13: -0.4326 REMARK 3 S21: 0.1849 S22: -0.0258 S23: -0.0512 REMARK 3 S31: 0.3315 S32: -0.2067 S33: 0.1196 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 180 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.8850 11.3154 82.6444 REMARK 3 T TENSOR REMARK 3 T11: 0.5837 T22: 0.4876 REMARK 3 T33: 0.5689 T12: 0.0232 REMARK 3 T13: 0.0653 T23: 0.1458 REMARK 3 L TENSOR REMARK 3 L11: 3.8725 L22: 4.6333 REMARK 3 L33: 5.5410 L12: -0.5119 REMARK 3 L13: -2.9210 L23: 0.8962 REMARK 3 S TENSOR REMARK 3 S11: -0.2357 S12: -0.2559 S13: -0.1776 REMARK 3 S21: 0.2912 S22: 0.0401 S23: -0.3299 REMARK 3 S31: 0.8924 S32: 0.1035 S33: 0.2308 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 262 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.9531 23.6996 77.1445 REMARK 3 T TENSOR REMARK 3 T11: 0.6863 T22: 0.5149 REMARK 3 T33: 0.7356 T12: -0.0841 REMARK 3 T13: -0.0580 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 3.7096 L22: 0.5721 REMARK 3 L33: 6.7565 L12: -0.2879 REMARK 3 L13: -1.6120 L23: 0.2964 REMARK 3 S TENSOR REMARK 3 S11: -0.1558 S12: -0.0846 S13: 0.0014 REMARK 3 S21: 0.2678 S22: -0.2538 S23: -0.3331 REMARK 3 S31: -0.1164 S32: 0.7012 S33: 0.4037 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 124 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.4704 21.4415 23.7290 REMARK 3 T TENSOR REMARK 3 T11: 0.7571 T22: 0.6185 REMARK 3 T33: 0.5519 T12: 0.0826 REMARK 3 T13: -0.0341 T23: -0.0541 REMARK 3 L TENSOR REMARK 3 L11: 2.2479 L22: 1.0814 REMARK 3 L33: 4.8738 L12: 0.4136 REMARK 3 L13: 2.7695 L23: 0.4951 REMARK 3 S TENSOR REMARK 3 S11: -0.2344 S12: -0.4645 S13: 0.4696 REMARK 3 S21: -0.1010 S22: -0.1813 S23: 0.0282 REMARK 3 S31: -0.4574 S32: -0.7508 S33: 0.4729 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 180 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.3832 22.8138 -8.6341 REMARK 3 T TENSOR REMARK 3 T11: 0.8483 T22: 0.6495 REMARK 3 T33: 0.7013 T12: -0.0461 REMARK 3 T13: -0.1079 T23: 0.2574 REMARK 3 L TENSOR REMARK 3 L11: 4.8758 L22: 4.5812 REMARK 3 L33: 8.3337 L12: -0.4722 REMARK 3 L13: 0.0512 L23: -1.2017 REMARK 3 S TENSOR REMARK 3 S11: -0.6149 S12: 0.2433 S13: 0.2767 REMARK 3 S21: -0.0864 S22: 0.2219 S23: 0.5485 REMARK 3 S31: -1.1318 S32: -0.9130 S33: -0.1118 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 205 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1628 22.4770 9.9169 REMARK 3 T TENSOR REMARK 3 T11: 0.5531 T22: 0.7325 REMARK 3 T33: 0.6904 T12: 0.0210 REMARK 3 T13: -0.0263 T23: 0.0517 REMARK 3 L TENSOR REMARK 3 L11: 2.5850 L22: 0.9560 REMARK 3 L33: 5.8031 L12: -0.0869 REMARK 3 L13: 2.3266 L23: -1.6842 REMARK 3 S TENSOR REMARK 3 S11: -0.2794 S12: 0.4107 S13: 0.1631 REMARK 3 S21: 0.0165 S22: -0.1147 S23: -0.4082 REMARK 3 S31: -0.5259 S32: 0.4275 S33: 0.3575 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 124 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.9869 36.7884 58.1383 REMARK 3 T TENSOR REMARK 3 T11: 0.5036 T22: 0.7910 REMARK 3 T33: 0.7186 T12: -0.0615 REMARK 3 T13: 0.0522 T23: -0.1764 REMARK 3 L TENSOR REMARK 3 L11: 2.0884 L22: 2.9575 REMARK 3 L33: 2.5991 L12: -0.7305 REMARK 3 L13: -1.8771 L23: 2.2934 REMARK 3 S TENSOR REMARK 3 S11: 0.1487 S12: -0.1830 S13: 0.2053 REMARK 3 S21: -0.2735 S22: 1.1620 S23: -1.3007 REMARK 3 S31: -0.2349 S32: 1.1717 S33: -0.9239 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 191 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1076 51.0070 57.1954 REMARK 3 T TENSOR REMARK 3 T11: 1.0847 T22: 0.7481 REMARK 3 T33: 0.8281 T12: -0.0242 REMARK 3 T13: 0.2959 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 3.5170 L22: 5.3621 REMARK 3 L33: 2.8795 L12: -1.0348 REMARK 3 L13: -0.0255 L23: 1.5771 REMARK 3 S TENSOR REMARK 3 S11: 0.7668 S12: 0.6047 S13: 0.9713 REMARK 3 S21: -1.4230 S22: -0.2974 S23: -0.5954 REMARK 3 S31: -1.9428 S32: 0.0913 S33: -0.3219 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 250 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.5788 42.9843 69.2042 REMARK 3 T TENSOR REMARK 3 T11: 0.4834 T22: 0.7921 REMARK 3 T33: 0.7452 T12: -0.1053 REMARK 3 T13: 0.0922 T23: -0.1583 REMARK 3 L TENSOR REMARK 3 L11: 1.4429 L22: 3.2117 REMARK 3 L33: 6.3223 L12: -2.1030 REMARK 3 L13: -2.1177 L23: 3.8541 REMARK 3 S TENSOR REMARK 3 S11: -0.2211 S12: -0.0988 S13: 0.1734 REMARK 3 S21: 0.4653 S22: -0.1334 S23: 0.3715 REMARK 3 S31: -0.0061 S32: 0.1877 S33: 0.2944 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8V7Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-23. REMARK 100 THE DEPOSITION ID IS D_1000279505. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21120 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 1.04000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 0.018 - 0.02 M REMARK 280 MAGNESIUM CHLORIDE HEXAHYDRATE, 20% W/V POLY(ACRYLIC ACID SODIUM REMARK 280 SALT) 5100, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.71100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 123 REMARK 465 GLY A 180 REMARK 465 GLY A 181 REMARK 465 ASN A 182 REMARK 465 ASP A 183 REMARK 465 GLY A 184 REMARK 465 GLY A 241 REMARK 465 SER A 320 REMARK 465 LEU B 123 REMARK 465 SER B 320 REMARK 465 LEU C 123 REMARK 465 GLY C 181 REMARK 465 ASN C 182 REMARK 465 ASP C 183 REMARK 465 GLY C 184 REMARK 465 SER C 320 REMARK 465 LEU D 123 REMARK 465 GLY D 180 REMARK 465 GLY D 181 REMARK 465 ASN D 182 REMARK 465 ASP D 183 REMARK 465 GLY D 184 REMARK 465 SER D 320 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 215 -134.71 62.00 REMARK 500 ASN A 265 76.35 42.69 REMARK 500 PRO B 212 35.58 -98.95 REMARK 500 ALA B 213 -64.78 57.28 REMARK 500 ASN B 215 -156.32 56.23 REMARK 500 LYS B 239 -55.21 -136.63 REMARK 500 ALA C 213 -11.99 64.70 REMARK 500 ASN C 215 -143.05 58.74 REMARK 500 ASN D 215 -152.41 60.29 REMARK 500 ASN D 240 -124.43 60.33 REMARK 500 ASN D 265 -78.58 -120.92 REMARK 500 REMARK 500 REMARK: NULL DBREF 8V7Q A 123 320 UNP P18013 IPAD_SHIFL 123 321 DBREF 8V7Q B 123 320 UNP P18013 IPAD_SHIFL 123 321 DBREF 8V7Q C 123 320 UNP P18013 IPAD_SHIFL 123 321 DBREF 8V7Q D 123 320 UNP P18013 IPAD_SHIFL 123 321 SEQADV 8V7Q A UNP P18013 GLN 148 DELETION SEQADV 8V7Q B UNP P18013 GLN 148 DELETION SEQADV 8V7Q C UNP P18013 GLN 148 DELETION SEQADV 8V7Q D UNP P18013 GLN 148 DELETION SEQRES 1 A 198 LEU ASP GLY ASP GLN MET ILE SER HIS ARG GLU LEU TRP SEQRES 2 A 198 ALA LYS ILE ALA ASN SER ILE ASN ASP ILE ASN GLU TYR SEQRES 3 A 198 LEU LYS VAL TYR GLU HIS ALA VAL SER SER TYR THR GLN SEQRES 4 A 198 MET TYR GLN ASP PHE SER ALA VAL LEU SER SER LEU ALA SEQRES 5 A 198 GLY TRP ILE SER PRO GLY GLY ASN ASP GLY ASN SER VAL SEQRES 6 A 198 LYS LEU GLN VAL ASN SER LEU LYS LYS ALA LEU GLU GLU SEQRES 7 A 198 LEU LYS GLU LYS TYR LYS ASP LYS PRO LEU TYR PRO ALA SEQRES 8 A 198 ASN ASN THR VAL SER GLN GLU GLN ALA ASN LYS TRP LEU SEQRES 9 A 198 THR GLU LEU GLY GLY THR ILE GLY LYS VAL SER GLN LYS SEQRES 10 A 198 ASN GLY GLY TYR VAL VAL SER ILE ASN MET THR PRO ILE SEQRES 11 A 198 ASP ASN MET LEU LYS SER LEU ASP ASN LEU GLY GLY ASN SEQRES 12 A 198 GLY GLU VAL VAL LEU ASP ASN ALA LYS TYR GLN ALA TRP SEQRES 13 A 198 ASN ALA GLY PHE SER ALA GLU ASP GLU THR MET LYS ASN SEQRES 14 A 198 ASN LEU GLN THR LEU VAL GLN LYS TYR SER ASN ALA ASN SEQRES 15 A 198 SER ILE PHE ASP ASN LEU VAL LYS VAL LEU SER SER THR SEQRES 16 A 198 ILE SER SER SEQRES 1 B 198 LEU ASP GLY ASP GLN MET ILE SER HIS ARG GLU LEU TRP SEQRES 2 B 198 ALA LYS ILE ALA ASN SER ILE ASN ASP ILE ASN GLU TYR SEQRES 3 B 198 LEU LYS VAL TYR GLU HIS ALA VAL SER SER TYR THR GLN SEQRES 4 B 198 MET TYR GLN ASP PHE SER ALA VAL LEU SER SER LEU ALA SEQRES 5 B 198 GLY TRP ILE SER PRO GLY GLY ASN ASP GLY ASN SER VAL SEQRES 6 B 198 LYS LEU GLN VAL ASN SER LEU LYS LYS ALA LEU GLU GLU SEQRES 7 B 198 LEU LYS GLU LYS TYR LYS ASP LYS PRO LEU TYR PRO ALA SEQRES 8 B 198 ASN ASN THR VAL SER GLN GLU GLN ALA ASN LYS TRP LEU SEQRES 9 B 198 THR GLU LEU GLY GLY THR ILE GLY LYS VAL SER GLN LYS SEQRES 10 B 198 ASN GLY GLY TYR VAL VAL SER ILE ASN MET THR PRO ILE SEQRES 11 B 198 ASP ASN MET LEU LYS SER LEU ASP ASN LEU GLY GLY ASN SEQRES 12 B 198 GLY GLU VAL VAL LEU ASP ASN ALA LYS TYR GLN ALA TRP SEQRES 13 B 198 ASN ALA GLY PHE SER ALA GLU ASP GLU THR MET LYS ASN SEQRES 14 B 198 ASN LEU GLN THR LEU VAL GLN LYS TYR SER ASN ALA ASN SEQRES 15 B 198 SER ILE PHE ASP ASN LEU VAL LYS VAL LEU SER SER THR SEQRES 16 B 198 ILE SER SER SEQRES 1 C 198 LEU ASP GLY ASP GLN MET ILE SER HIS ARG GLU LEU TRP SEQRES 2 C 198 ALA LYS ILE ALA ASN SER ILE ASN ASP ILE ASN GLU TYR SEQRES 3 C 198 LEU LYS VAL TYR GLU HIS ALA VAL SER SER TYR THR GLN SEQRES 4 C 198 MET TYR GLN ASP PHE SER ALA VAL LEU SER SER LEU ALA SEQRES 5 C 198 GLY TRP ILE SER PRO GLY GLY ASN ASP GLY ASN SER VAL SEQRES 6 C 198 LYS LEU GLN VAL ASN SER LEU LYS LYS ALA LEU GLU GLU SEQRES 7 C 198 LEU LYS GLU LYS TYR LYS ASP LYS PRO LEU TYR PRO ALA SEQRES 8 C 198 ASN ASN THR VAL SER GLN GLU GLN ALA ASN LYS TRP LEU SEQRES 9 C 198 THR GLU LEU GLY GLY THR ILE GLY LYS VAL SER GLN LYS SEQRES 10 C 198 ASN GLY GLY TYR VAL VAL SER ILE ASN MET THR PRO ILE SEQRES 11 C 198 ASP ASN MET LEU LYS SER LEU ASP ASN LEU GLY GLY ASN SEQRES 12 C 198 GLY GLU VAL VAL LEU ASP ASN ALA LYS TYR GLN ALA TRP SEQRES 13 C 198 ASN ALA GLY PHE SER ALA GLU ASP GLU THR MET LYS ASN SEQRES 14 C 198 ASN LEU GLN THR LEU VAL GLN LYS TYR SER ASN ALA ASN SEQRES 15 C 198 SER ILE PHE ASP ASN LEU VAL LYS VAL LEU SER SER THR SEQRES 16 C 198 ILE SER SER SEQRES 1 D 198 LEU ASP GLY ASP GLN MET ILE SER HIS ARG GLU LEU TRP SEQRES 2 D 198 ALA LYS ILE ALA ASN SER ILE ASN ASP ILE ASN GLU TYR SEQRES 3 D 198 LEU LYS VAL TYR GLU HIS ALA VAL SER SER TYR THR GLN SEQRES 4 D 198 MET TYR GLN ASP PHE SER ALA VAL LEU SER SER LEU ALA SEQRES 5 D 198 GLY TRP ILE SER PRO GLY GLY ASN ASP GLY ASN SER VAL SEQRES 6 D 198 LYS LEU GLN VAL ASN SER LEU LYS LYS ALA LEU GLU GLU SEQRES 7 D 198 LEU LYS GLU LYS TYR LYS ASP LYS PRO LEU TYR PRO ALA SEQRES 8 D 198 ASN ASN THR VAL SER GLN GLU GLN ALA ASN LYS TRP LEU SEQRES 9 D 198 THR GLU LEU GLY GLY THR ILE GLY LYS VAL SER GLN LYS SEQRES 10 D 198 ASN GLY GLY TYR VAL VAL SER ILE ASN MET THR PRO ILE SEQRES 11 D 198 ASP ASN MET LEU LYS SER LEU ASP ASN LEU GLY GLY ASN SEQRES 12 D 198 GLY GLU VAL VAL LEU ASP ASN ALA LYS TYR GLN ALA TRP SEQRES 13 D 198 ASN ALA GLY PHE SER ALA GLU ASP GLU THR MET LYS ASN SEQRES 14 D 198 ASN LEU GLN THR LEU VAL GLN LYS TYR SER ASN ALA ASN SEQRES 15 D 198 SER ILE PHE ASP ASN LEU VAL LYS VAL LEU SER SER THR SEQRES 16 D 198 ILE SER SER HELIX 1 AA1 HIS A 131 SER A 172 1 42 HELIX 2 AA2 LEU A 173 GLY A 175 5 3 HELIX 3 AA3 VAL A 191 TYR A 205 1 15 HELIX 4 AA4 SER A 218 GLY A 230 1 13 HELIX 5 AA5 MET A 249 ASN A 261 1 13 HELIX 6 AA6 ASP A 271 ILE A 318 1 48 HELIX 7 AA7 HIS B 131 SER B 172 1 42 HELIX 8 AA8 LEU B 173 GLY B 175 5 3 HELIX 9 AA9 VAL B 191 TYR B 205 1 15 HELIX 10 AB1 SER B 218 GLY B 230 1 13 HELIX 11 AB2 MET B 249 LEU B 262 1 14 HELIX 12 AB3 ASP B 271 SER B 319 1 49 HELIX 13 AB4 HIS C 131 SER C 172 1 42 HELIX 14 AB5 LEU C 173 GLY C 175 5 3 HELIX 15 AB6 VAL C 191 TYR C 205 1 15 HELIX 16 AB7 SER C 218 GLY C 230 1 13 HELIX 17 AB8 MET C 249 ASN C 261 1 13 HELIX 18 AB9 ASP C 271 SER C 319 1 49 HELIX 19 AC1 HIS D 131 LEU D 173 1 43 HELIX 20 AC2 GLN D 190 TYR D 205 1 16 HELIX 21 AC3 SER D 218 GLY D 230 1 13 HELIX 22 AC4 MET D 249 ASN D 261 1 13 HELIX 23 AC5 ASP D 271 SER D 319 1 49 SHEET 1 AA1 2 MET A 128 SER A 130 0 SHEET 2 AA1 2 MET C 128 SER C 130 -1 O ILE C 129 N ILE A 129 SHEET 1 AA2 3 ILE A 177 SER A 178 0 SHEET 2 AA2 3 VAL A 187 GLN A 190 -1 O LYS A 188 N SER A 178 SHEET 3 AA2 3 GLU A 267 LEU A 270 -1 O LEU A 270 N VAL A 187 SHEET 1 AA3 2 GLY A 234 GLN A 238 0 SHEET 2 AA3 2 TYR A 243 ILE A 247 -1 O VAL A 244 N SER A 237 SHEET 1 AA4 2 MET B 128 SER B 130 0 SHEET 2 AA4 2 MET D 128 SER D 130 -1 O ILE D 129 N ILE B 129 SHEET 1 AA5 3 ILE B 177 PRO B 179 0 SHEET 2 AA5 3 VAL B 187 GLN B 190 -1 O LYS B 188 N SER B 178 SHEET 3 AA5 3 GLU B 267 LEU B 270 -1 O LEU B 270 N VAL B 187 SHEET 1 AA6 2 GLY B 234 GLN B 238 0 SHEET 2 AA6 2 TYR B 243 ILE B 247 -1 O VAL B 244 N SER B 237 SHEET 1 AA7 3 ILE C 177 PRO C 179 0 SHEET 2 AA7 3 VAL C 187 GLN C 190 -1 O LYS C 188 N SER C 178 SHEET 3 AA7 3 GLU C 267 LEU C 270 -1 O VAL C 268 N LEU C 189 SHEET 1 AA8 3 PRO C 209 TYR C 211 0 SHEET 2 AA8 3 TYR C 243 ILE C 247 -1 O VAL C 245 N TYR C 211 SHEET 3 AA8 3 GLY C 234 GLN C 238 -1 N SER C 237 O VAL C 244 SHEET 1 AA9 3 ILE D 177 SER D 178 0 SHEET 2 AA9 3 VAL D 187 LEU D 189 -1 O LYS D 188 N SER D 178 SHEET 3 AA9 3 VAL D 268 LEU D 270 -1 O VAL D 268 N LEU D 189 SHEET 1 AB1 3 PRO D 209 TYR D 211 0 SHEET 2 AB1 3 GLY D 242 ILE D 247 -1 O VAL D 245 N TYR D 211 SHEET 3 AB1 3 GLY D 234 LYS D 239 -1 N SER D 237 O VAL D 244 CISPEP 1 TYR A 211 PRO A 212 0 -3.45 CISPEP 2 TYR B 211 PRO B 212 0 1.47 CISPEP 3 TYR C 211 PRO C 212 0 1.75 CISPEP 4 TYR D 211 PRO D 212 0 -1.40 CRYST1 44.962 69.422 172.958 90.00 90.28 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022241 0.000000 0.000107 0.00000 SCALE2 0.000000 0.014405 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005782 0.00000