HEADER IMMUNE SYSTEM 18-DEC-23 8VEG TITLE CRYSTAL STRUCTURE OF AN ENGINEERED CONFORMATIONALLY RIGID ANTI- TITLE 2 TRYPTASE FAB VARIANT E104.V1.4DS.S112F COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB E104.V1.4DS.S112F LIGHT CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: FAB E104.V1.4DS.S112F HEAVY CHAIN; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS ANTIBODY FRAGMENT, FAB, PROTEIN ENGINEERING, TRYPTASE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.E.KUNG,J.SUDHAMSU REVDAT 2 06-NOV-24 8VEG 1 JRNL REVDAT 1 30-OCT-24 8VEG 0 JRNL AUTH J.E.KUNG,M.C.JOHNSON,C.C.JAO,C.P.ARTHUR,D.TEGUNOV,A.ROHOU, JRNL AUTH 2 J.SUDHAMSU JRNL TITL DISULFI DE CONSTRAINED FABS OVERCOME TARGET SIZE LIMITATION JRNL TITL 2 FOR HIGH-RESOLUTION SINGLE-PARTICLE CRYO-EM. JRNL REF BIORXIV 2024 JRNL REFN ISSN 2692-8205 JRNL PMID 38798381 JRNL DOI 10.1101/2024.05.10.593593 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20RC3-4406_FINAL REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 36945 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.410 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2400 - 4.8200 1.00 2748 157 0.1875 0.2036 REMARK 3 2 4.8200 - 3.8300 1.00 2590 148 0.1576 0.1640 REMARK 3 3 3.8300 - 3.3400 1.00 2540 146 0.1930 0.2215 REMARK 3 4 3.3400 - 3.0400 1.00 2523 145 0.2114 0.3078 REMARK 3 5 3.0400 - 2.8200 1.00 2522 144 0.2315 0.2529 REMARK 3 6 2.8200 - 2.6500 1.00 2491 143 0.2287 0.2587 REMARK 3 7 2.6500 - 2.5200 1.00 2502 142 0.2284 0.2568 REMARK 3 8 2.5200 - 2.4100 1.00 2496 143 0.2404 0.2643 REMARK 3 9 2.4100 - 2.3200 1.00 2475 141 0.2612 0.2836 REMARK 3 10 2.3200 - 2.2400 0.92 2267 131 0.3555 0.3937 REMARK 3 11 2.2400 - 2.1700 0.96 2377 136 0.2700 0.3169 REMARK 3 12 2.1700 - 2.1100 1.00 2467 141 0.2525 0.3080 REMARK 3 13 2.1100 - 2.0500 1.00 2479 142 0.2993 0.3292 REMARK 3 14 2.0500 - 2.0000 1.00 2468 141 0.3194 0.3864 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.247 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.38 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3295 REMARK 3 ANGLE : 0.919 4494 REMARK 3 CHIRALITY : 0.058 521 REMARK 3 PLANARITY : 0.016 570 REMARK 3 DIHEDRAL : 16.733 1184 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 2:25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.672 -30.926 -10.964 REMARK 3 T TENSOR REMARK 3 T11: 0.2293 T22: 0.2251 REMARK 3 T33: 0.4029 T12: -0.0540 REMARK 3 T13: -0.0198 T23: -0.0236 REMARK 3 L TENSOR REMARK 3 L11: 5.8234 L22: 8.7501 REMARK 3 L33: 5.8504 L12: -1.7293 REMARK 3 L13: -2.2620 L23: 0.9762 REMARK 3 S TENSOR REMARK 3 S11: -0.0198 S12: -0.1712 S13: -0.0130 REMARK 3 S21: 0.2707 S22: 0.1118 S23: 0.7102 REMARK 3 S31: -0.1480 S32: -0.1113 S33: -0.1093 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 26:38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -53.513 -16.505 -8.490 REMARK 3 T TENSOR REMARK 3 T11: 0.4708 T22: 0.3106 REMARK 3 T33: 0.5617 T12: 0.0206 REMARK 3 T13: 0.0328 T23: -0.0300 REMARK 3 L TENSOR REMARK 3 L11: 5.3329 L22: 7.4587 REMARK 3 L33: 5.4480 L12: -0.7826 REMARK 3 L13: -1.3553 L23: 0.0357 REMARK 3 S TENSOR REMARK 3 S11: 0.2304 S12: 0.0538 S13: 0.3867 REMARK 3 S21: 0.5377 S22: -0.1148 S23: 1.1727 REMARK 3 S31: -0.6960 S32: -0.6159 S33: -0.0682 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 39:75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -52.021 -21.236 -17.688 REMARK 3 T TENSOR REMARK 3 T11: 0.3527 T22: 0.3022 REMARK 3 T33: 0.4483 T12: 0.0259 REMARK 3 T13: -0.0733 T23: 0.0292 REMARK 3 L TENSOR REMARK 3 L11: 2.9435 L22: 4.1226 REMARK 3 L33: 3.6857 L12: 1.9389 REMARK 3 L13: 0.6533 L23: 1.2537 REMARK 3 S TENSOR REMARK 3 S11: -0.0201 S12: 0.3179 S13: 0.3342 REMARK 3 S21: -0.2020 S22: 0.0525 S23: 0.4758 REMARK 3 S31: -0.3117 S32: -0.2326 S33: -0.0217 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 76:91 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.422 -27.902 -17.761 REMARK 3 T TENSOR REMARK 3 T11: 0.2451 T22: 0.2366 REMARK 3 T33: 0.3588 T12: -0.0452 REMARK 3 T13: -0.0166 T23: 0.0299 REMARK 3 L TENSOR REMARK 3 L11: 5.5442 L22: 7.3765 REMARK 3 L33: 7.6688 L12: -0.5960 REMARK 3 L13: 0.6337 L23: 2.9012 REMARK 3 S TENSOR REMARK 3 S11: 0.2210 S12: 0.3818 S13: 0.4455 REMARK 3 S21: -0.3001 S22: 0.2123 S23: 0.1078 REMARK 3 S31: -0.2642 S32: 0.2793 S33: -0.3812 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 92:103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.832 -15.779 -2.001 REMARK 3 T TENSOR REMARK 3 T11: 0.5054 T22: 0.6545 REMARK 3 T33: 0.7091 T12: -0.0353 REMARK 3 T13: 0.0340 T23: -0.3485 REMARK 3 L TENSOR REMARK 3 L11: 1.4417 L22: 2.7849 REMARK 3 L33: 2.5162 L12: -1.8005 REMARK 3 L13: -0.4869 L23: -0.4066 REMARK 3 S TENSOR REMARK 3 S11: 0.3298 S12: -1.2102 S13: 0.7229 REMARK 3 S21: 0.5062 S22: -0.6915 S23: 0.3458 REMARK 3 S31: -0.2906 S32: -0.8048 S33: 0.0698 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 104:130 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.234 -39.957 -22.568 REMARK 3 T TENSOR REMARK 3 T11: 0.4945 T22: 0.6518 REMARK 3 T33: 0.6911 T12: 0.0812 REMARK 3 T13: 0.0188 T23: -0.3149 REMARK 3 L TENSOR REMARK 3 L11: 0.9658 L22: 1.6862 REMARK 3 L33: 0.7951 L12: -1.0861 REMARK 3 L13: 0.0869 L23: 0.3804 REMARK 3 S TENSOR REMARK 3 S11: 0.6051 S12: 0.8383 S13: -0.5745 REMARK 3 S21: -0.4272 S22: -0.1941 S23: -0.4440 REMARK 3 S31: -0.0704 S32: 0.2894 S33: -0.3933 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 131:152 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.065 -45.605 -20.125 REMARK 3 T TENSOR REMARK 3 T11: 0.5399 T22: 0.4956 REMARK 3 T33: 0.6421 T12: 0.1362 REMARK 3 T13: -0.1291 T23: -0.2919 REMARK 3 L TENSOR REMARK 3 L11: 6.9646 L22: 2.1664 REMARK 3 L33: 1.1629 L12: -0.8275 REMARK 3 L13: -0.3160 L23: 1.3619 REMARK 3 S TENSOR REMARK 3 S11: 0.2801 S12: 0.6943 S13: -1.1901 REMARK 3 S21: 0.0657 S22: -0.0961 S23: 0.0586 REMARK 3 S31: 0.2052 S32: 0.0632 S33: -0.0967 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN A AND RESID 153:176 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.749 -42.286 -19.044 REMARK 3 T TENSOR REMARK 3 T11: 0.4984 T22: 0.5005 REMARK 3 T33: 0.4372 T12: 0.0795 REMARK 3 T13: -0.0548 T23: -0.1390 REMARK 3 L TENSOR REMARK 3 L11: 6.1826 L22: 3.4476 REMARK 3 L33: 2.4974 L12: -0.6288 REMARK 3 L13: 0.8678 L23: -0.1045 REMARK 3 S TENSOR REMARK 3 S11: 0.0796 S12: 0.1993 S13: -0.2610 REMARK 3 S21: 0.3488 S22: -0.0606 S23: -0.1583 REMARK 3 S31: 0.0588 S32: -0.3998 S33: 0.0041 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN A AND RESID 177:212 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.549 -49.223 -21.445 REMARK 3 T TENSOR REMARK 3 T11: 0.5393 T22: 0.6967 REMARK 3 T33: 0.9074 T12: 0.1714 REMARK 3 T13: -0.1151 T23: -0.3703 REMARK 3 L TENSOR REMARK 3 L11: 0.6398 L22: 4.5380 REMARK 3 L33: 2.1965 L12: -1.6099 REMARK 3 L13: -0.7590 L23: 1.3127 REMARK 3 S TENSOR REMARK 3 S11: 0.3852 S12: 0.7733 S13: -0.9743 REMARK 3 S21: -0.1273 S22: 0.2141 S23: -0.8437 REMARK 3 S31: 0.0332 S32: 0.5835 S33: -0.3368 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN B AND RESID 2:34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.550 -8.121 -11.618 REMARK 3 T TENSOR REMARK 3 T11: 0.4147 T22: 0.3298 REMARK 3 T33: 0.3208 T12: -0.0625 REMARK 3 T13: 0.0288 T23: -0.0381 REMARK 3 L TENSOR REMARK 3 L11: 4.9167 L22: 7.8822 REMARK 3 L33: 3.6983 L12: -1.0466 REMARK 3 L13: 1.4007 L23: -1.6943 REMARK 3 S TENSOR REMARK 3 S11: -0.1635 S12: 0.1154 S13: 0.3635 REMARK 3 S21: -0.2438 S22: 0.2217 S23: -0.2945 REMARK 3 S31: -0.2626 S32: 0.0859 S33: -0.0191 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN B AND RESID 35:150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.205 -14.507 -7.841 REMARK 3 T TENSOR REMARK 3 T11: 0.3953 T22: 0.2639 REMARK 3 T33: 0.2577 T12: -0.0252 REMARK 3 T13: -0.0341 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 1.7309 L22: 5.1710 REMARK 3 L33: 1.1251 L12: -1.7440 REMARK 3 L13: -0.8410 L23: 1.4355 REMARK 3 S TENSOR REMARK 3 S11: -0.1212 S12: -0.0068 S13: -0.0514 REMARK 3 S21: 0.1385 S22: 0.1443 S23: 0.1304 REMARK 3 S31: -0.0373 S32: 0.1563 S33: -0.0061 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN B AND RESID 151:218 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.122 -27.722 -21.373 REMARK 3 T TENSOR REMARK 3 T11: 1.0602 T22: 0.6546 REMARK 3 T33: 0.4095 T12: 0.0447 REMARK 3 T13: -0.0504 T23: 0.0432 REMARK 3 L TENSOR REMARK 3 L11: 3.3896 L22: 1.2961 REMARK 3 L33: 4.8533 L12: 1.0714 REMARK 3 L13: 0.4037 L23: 1.3966 REMARK 3 S TENSOR REMARK 3 S11: -0.2615 S12: 0.6948 S13: 0.4362 REMARK 3 S21: -1.0624 S22: 0.2361 S23: 0.0748 REMARK 3 S31: -1.2704 S32: 0.1318 S33: 0.0085 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8VEG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-DEC-23. REMARK 100 THE DEPOSITION ID IS D_1000279982. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979460 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 717900 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 47.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 19.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07047 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.5200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 19.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.62300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M NA CITRATE, 20% PEG 3350, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.34867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 90.69733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 68.02300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 113.37167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 22.67433 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 45.34867 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 90.69733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 113.37167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 68.02300 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 22.67433 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 GLU A 213 REMARK 465 CYS A 214 REMARK 465 SER B 131 REMARK 465 SER B 132 REMARK 465 LYS B 133 REMARK 465 SER B 134 REMARK 465 THR B 135 REMARK 465 SER B 136 REMARK 465 GLY B 137 REMARK 465 GLY B 138 REMARK 465 THR B 139 REMARK 465 ALA B 140 REMARK 465 SER B 191 REMARK 465 SER B 192 REMARK 465 SER B 193 REMARK 465 LEU B 194 REMARK 465 GLY B 195 REMARK 465 THR B 196 REMARK 465 GLN B 197 REMARK 465 THR B 198 REMARK 465 LYS B 219 REMARK 465 SER B 220 REMARK 465 CYS B 221 REMARK 465 ASP B 222 REMARK 465 LYS B 223 REMARK 465 THR B 224 REMARK 465 HIS B 225 REMARK 465 THR B 226 REMARK 465 HIS B 227 REMARK 465 HIS B 228 REMARK 465 HIS B 229 REMARK 465 HIS B 230 REMARK 465 HIS B 231 REMARK 465 HIS B 232 REMARK 465 PRO B 233 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 95 O HOH A 301 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 51 -46.95 72.35 REMARK 500 ASP A 93 24.47 81.33 REMARK 500 ARG A 94 -159.45 178.59 REMARK 500 ASN A 138 68.46 60.04 REMARK 500 ARG A 211 101.37 -51.29 REMARK 500 SER B 15 -8.33 76.83 REMARK 500 ARG B 66 -0.48 -140.83 REMARK 500 ARG B 66 -0.48 -141.33 REMARK 500 ALA B 100A 51.03 -141.66 REMARK 500 ASP B 148 62.43 64.08 REMARK 500 CYS B 151 -157.36 -97.90 REMARK 500 CYS B 153 110.34 -39.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 32 0.17 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS B 64 -11.08 REMARK 500 LYS B 64 -11.06 REMARK 500 REMARK 500 REMARK: NULL DBREF 8VEG A 1 214 PDB 8VEG 8VEG 1 214 DBREF 8VEG B 1 233 PDB 8VEG 8VEG 1 233 SEQRES 1 A 217 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 A 217 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN SER ILE SEQRES 3 A 217 LYS SER VAL TYR ASN ASN ARG LEU GLY TRP TYR GLN GLN SEQRES 4 A 217 LYS CYS GLY LYS ALA PRO LYS LEU LEU ILE TYR GLU THR SEQRES 5 A 217 SER ILE LEU THR SER GLY VAL PRO SER ARG PHE SER GLY SEQRES 6 A 217 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER SEQRES 7 A 217 LEU GLN CYS GLU ASP PHE ALA THR TYR TYR CYS ALA GLY SEQRES 8 A 217 GLY PHE ASP ARG SER GLY ASP THR THR PHE GLY GLN GLY SEQRES 9 A 217 THR LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER SEQRES 10 A 217 VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER SEQRES 11 A 217 GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR SEQRES 12 A 217 PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA SEQRES 13 A 217 LEU GLN SER GLY ASN SER GLN GLU SER VAL THR CYS GLN SEQRES 14 A 217 ASP SER LYS ASP CYS THR TYR SER LEU SER SER THR LEU SEQRES 15 A 217 THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR SEQRES 16 A 217 ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL SEQRES 17 A 217 THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 B 238 GLU VAL GLN LEU VAL GLU SER GLY PRO GLY CYS VAL LYS SEQRES 2 B 238 PRO SER GLU THR LEU SER LEU THR CYS THR VAL SER ARG SEQRES 3 B 238 PHE SER LEU ILE GLY TYR ALA ILE THR TRP ILE ARG GLN SEQRES 4 B 238 PRO PRO GLY LYS GLY LEU GLU TRP ILE GLY GLY ILE SER SEQRES 5 B 238 SER ALA ALA THR THR PHE TYR SER SER TRP ALA LYS SER SEQRES 6 B 238 ARG VAL THR ILE SER VAL ASP THR SER LYS ASN GLN PHE SEQRES 7 B 238 SER LEU LYS LEU SER SER VAL THR ALA ALA ASP THR ALA SEQRES 8 B 238 VAL TYR TYR CYS ALA ARG ASP PRO ARG GLY TYR GLY ALA SEQRES 9 B 238 ALA LEU ASP ARG LEU ASP LEU TRP GLY GLN GLY THR CYS SEQRES 10 B 238 VAL THR VAL PHE SER ALA SER THR LYS GLY PRO SER VAL SEQRES 11 B 238 PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY SEQRES 12 B 238 THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE CYS SEQRES 13 B 238 GLU CYS PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU SEQRES 14 B 238 THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SEQRES 15 B 238 SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SEQRES 16 B 238 SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL SEQRES 17 B 238 ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL SEQRES 18 B 238 GLU PRO LYS SER CYS ASP LYS THR HIS THR HIS HIS HIS SEQRES 19 B 238 HIS HIS HIS PRO FORMUL 3 HOH *200(H2 O) HELIX 1 AA1 GLN A 79 PHE A 83 5 5 HELIX 2 AA2 SER A 121 SER A 127 1 7 HELIX 3 AA3 LYS A 183 GLU A 187 1 5 HELIX 4 AA4 THR B 83 THR B 87 5 5 HELIX 5 AA5 SER B 161 ALA B 163 5 3 HELIX 6 AA6 LYS B 206 ASN B 209 5 4 SHEET 1 AA1 4 MET A 4 SER A 7 0 SHEET 2 AA1 4 VAL A 19 SER A 25 -1 O GLN A 24 N THR A 5 SHEET 3 AA1 4 ASP A 70 ILE A 75 -1 O PHE A 71 N CYS A 23 SHEET 4 AA1 4 PHE A 62 SER A 67 -1 N SER A 63 O THR A 74 SHEET 1 AA2 6 SER A 10 SER A 14 0 SHEET 2 AA2 6 THR A 102 LYS A 107 1 O LYS A 107 N ALA A 13 SHEET 3 AA2 6 ALA A 84 GLY A 91 -1 N TYR A 86 O THR A 102 SHEET 4 AA2 6 LEU A 33 GLN A 38 -1 N GLY A 34 O ALA A 89 SHEET 5 AA2 6 LYS A 45 TYR A 49 -1 O LEU A 47 N TRP A 35 SHEET 6 AA2 6 ILE A 53 LEU A 54 -1 O ILE A 53 N TYR A 49 SHEET 1 AA3 4 SER A 10 SER A 14 0 SHEET 2 AA3 4 THR A 102 LYS A 107 1 O LYS A 107 N ALA A 13 SHEET 3 AA3 4 ALA A 84 GLY A 91 -1 N TYR A 86 O THR A 102 SHEET 4 AA3 4 THR A 96 PHE A 98 -1 O THR A 97 N GLY A 90 SHEET 1 AA4 4 SER A 114 PHE A 118 0 SHEET 2 AA4 4 THR A 129 PHE A 139 -1 O LEU A 135 N PHE A 116 SHEET 3 AA4 4 TYR A 173 SER A 182 -1 O TYR A 173 N PHE A 139 SHEET 4 AA4 4 SER A 159 VAL A 163 -1 N GLN A 160 O THR A 178 SHEET 1 AA5 4 ALA A 153 LEU A 154 0 SHEET 2 AA5 4 LYS A 145 VAL A 150 -1 N VAL A 150 O ALA A 153 SHEET 3 AA5 4 VAL A 191 THR A 197 -1 O ALA A 193 N LYS A 149 SHEET 4 AA5 4 VAL A 205 ASN A 210 -1 O VAL A 205 N VAL A 196 SHEET 1 AA6 4 LEU B 4 SER B 7 0 SHEET 2 AA6 4 LEU B 18 VAL B 24 -1 O THR B 23 N VAL B 5 SHEET 3 AA6 4 GLN B 77 LEU B 82 -1 O LEU B 80 N LEU B 20 SHEET 4 AA6 4 VAL B 67 ASP B 72 -1 N SER B 70 O SER B 79 SHEET 1 AA7 6 CYS B 11 VAL B 12 0 SHEET 2 AA7 6 THR B 107 VAL B 111 1 O THR B 110 N VAL B 12 SHEET 3 AA7 6 ALA B 88 ARG B 94 -1 N TYR B 90 O THR B 107 SHEET 4 AA7 6 ILE B 34 GLN B 39 -1 N ILE B 37 O TYR B 91 SHEET 5 AA7 6 GLU B 46 ILE B 51 -1 O ILE B 51 N ILE B 34 SHEET 6 AA7 6 THR B 57 TYR B 59 -1 O PHE B 58 N GLY B 50 SHEET 1 AA8 4 CYS B 11 VAL B 12 0 SHEET 2 AA8 4 THR B 107 VAL B 111 1 O THR B 110 N VAL B 12 SHEET 3 AA8 4 ALA B 88 ARG B 94 -1 N TYR B 90 O THR B 107 SHEET 4 AA8 4 LEU B 102 TRP B 103 -1 O LEU B 102 N ARG B 94 SHEET 1 AA9 4 SER B 124 LEU B 128 0 SHEET 2 AA9 4 LEU B 142 TYR B 149 -1 O LYS B 147 N SER B 124 SHEET 3 AA9 4 TYR B 181 VAL B 187 -1 O TYR B 181 N TYR B 149 SHEET 4 AA9 4 VAL B 168 THR B 170 -1 N HIS B 169 O VAL B 186 SHEET 1 AB1 4 SER B 124 LEU B 128 0 SHEET 2 AB1 4 LEU B 142 TYR B 149 -1 O LYS B 147 N SER B 124 SHEET 3 AB1 4 TYR B 181 VAL B 187 -1 O TYR B 181 N TYR B 149 SHEET 4 AB1 4 VAL B 174 LEU B 175 -1 N VAL B 174 O SER B 182 SHEET 1 AB2 3 THR B 156 TRP B 159 0 SHEET 2 AB2 3 ILE B 200 HIS B 205 -1 O ASN B 202 N SER B 158 SHEET 3 AB2 3 THR B 210 LYS B 215 -1 O THR B 210 N HIS B 205 SSBOND 1 CYS A 23 CYS A 88 1555 1555 2.05 SSBOND 2 CYS A 40 CYS A 165 1555 1555 2.03 SSBOND 3 CYS A 80 CYS A 171 1555 1555 2.04 SSBOND 4 CYS A 134 CYS A 194 1555 1555 2.04 SSBOND 5 CYS B 11 CYS B 151 1555 1555 2.03 SSBOND 6 CYS B 22 CYS B 92 1555 1555 2.05 SSBOND 7 CYS B 108 CYS B 153 1555 1555 2.05 SSBOND 8 CYS B 144 CYS B 201 1555 1555 2.03 CISPEP 1 SER A 7 PRO A 8 0 -4.82 CISPEP 2 TYR A 140 PRO A 141 0 0.60 CISPEP 3 PHE B 150 CYS B 151 0 19.57 CRYST1 116.342 116.342 136.046 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008595 0.004963 0.000000 0.00000 SCALE2 0.000000 0.009925 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007350 0.00000