data_8VFA # _entry.id 8VFA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.393 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8VFA pdb_00008vfa 10.2210/pdb8vfa/pdb WWPDB D_1000280080 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-05-08 2 'Structure model' 1 1 2024-06-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' # _database_PDB_caveat.id 1 _database_PDB_caveat.text ;8NI T 7 HAS WRONG CHIRALITY AT ATOM C1' ; # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8VFA _pdbx_database_status.recvd_initial_deposition_date 2023-12-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email bfreudenthal@kumc.edu _pdbx_contact_author.name_first Bret _pdbx_contact_author.name_last Freudenthal _pdbx_contact_author.name_mi D _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-1449-4710 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Oden, P.N.' 1 0009-0005-8506-2028 'Ryan, B.J.' 2 0000-0001-8262-8659 'Freudenthal, B.D.' 3 0000-0003-1449-4710 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 52 _citation.language ? _citation.page_first 5392 _citation.page_last 5405 _citation.title 'Biochemical and structural characterization of Fapy•dG replication by Human DNA polymerase beta.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkae277 _citation.pdbx_database_id_PubMed 38634780 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gao, S.' 1 ? primary 'Oden, P.N.' 2 ? primary 'Ryan, B.J.' 3 ? primary 'Yang, H.' 4 ? primary 'Freudenthal, B.D.' 5 ? primary 'Greenberg, M.M.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*GP*AP*CP*CP*(FAP)P*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') ; 4847.149 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3') ; 3061.004 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*GP*TP*CP*GP*G)-3') ; 1536.035 1 ? ? ? ? 4 polymer man 'DNA polymerase beta' 38241.672 1 2.7.7.7,4.2.99.- ? ? ? 5 non-polymer syn 'PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER' 521.208 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 7 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 8 water nat water 18.015 91 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(DC)(DG)(DA)(DC)(DC)(8NI)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACCXCGCATCAGC T ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC)' GCTGATGCGC P ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 4 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER' G2P 6 'SODIUM ION' NA 7 'MANGANESE (II) ION' MN 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DC n 1 6 DC n 1 7 8NI n 1 8 DC n 1 9 DG n 1 10 DC n 1 11 DA n 1 12 DT n 1 13 DC n 1 14 DA n 1 15 DG n 1 16 DC n 2 1 DG n 2 2 DC n 2 3 DT n 2 4 DG n 2 5 DA n 2 6 DT n 2 7 DG n 2 8 DC n 2 9 DG n 2 10 DC n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DG n 3 5 DG n 4 1 MET n 4 2 SER n 4 3 LYS n 4 4 ARG n 4 5 LYS n 4 6 ALA n 4 7 PRO n 4 8 GLN n 4 9 GLU n 4 10 THR n 4 11 LEU n 4 12 ASN n 4 13 GLY n 4 14 GLY n 4 15 ILE n 4 16 THR n 4 17 ASP n 4 18 MET n 4 19 LEU n 4 20 THR n 4 21 GLU n 4 22 LEU n 4 23 ALA n 4 24 ASN n 4 25 PHE n 4 26 GLU n 4 27 LYS n 4 28 ASN n 4 29 VAL n 4 30 SER n 4 31 GLN n 4 32 ALA n 4 33 ILE n 4 34 HIS n 4 35 LYS n 4 36 TYR n 4 37 ASN n 4 38 ALA n 4 39 TYR n 4 40 ARG n 4 41 LYS n 4 42 ALA n 4 43 ALA n 4 44 SER n 4 45 VAL n 4 46 ILE n 4 47 ALA n 4 48 LYS n 4 49 TYR n 4 50 PRO n 4 51 HIS n 4 52 LYS n 4 53 ILE n 4 54 LYS n 4 55 SER n 4 56 GLY n 4 57 ALA n 4 58 GLU n 4 59 ALA n 4 60 LYS n 4 61 LYS n 4 62 LEU n 4 63 PRO n 4 64 GLY n 4 65 VAL n 4 66 GLY n 4 67 THR n 4 68 LYS n 4 69 ILE n 4 70 ALA n 4 71 GLU n 4 72 LYS n 4 73 ILE n 4 74 ASP n 4 75 GLU n 4 76 PHE n 4 77 LEU n 4 78 ALA n 4 79 THR n 4 80 GLY n 4 81 LYS n 4 82 LEU n 4 83 ARG n 4 84 LYS n 4 85 LEU n 4 86 GLU n 4 87 LYS n 4 88 ILE n 4 89 ARG n 4 90 GLN n 4 91 ASP n 4 92 ASP n 4 93 THR n 4 94 SER n 4 95 SER n 4 96 SER n 4 97 ILE n 4 98 ASN n 4 99 PHE n 4 100 LEU n 4 101 THR n 4 102 ARG n 4 103 VAL n 4 104 SER n 4 105 GLY n 4 106 ILE n 4 107 GLY n 4 108 PRO n 4 109 SER n 4 110 ALA n 4 111 ALA n 4 112 ARG n 4 113 LYS n 4 114 PHE n 4 115 VAL n 4 116 ASP n 4 117 GLU n 4 118 GLY n 4 119 ILE n 4 120 LYS n 4 121 THR n 4 122 LEU n 4 123 GLU n 4 124 ASP n 4 125 LEU n 4 126 ARG n 4 127 LYS n 4 128 ASN n 4 129 GLU n 4 130 ASP n 4 131 LYS n 4 132 LEU n 4 133 ASN n 4 134 HIS n 4 135 HIS n 4 136 GLN n 4 137 ARG n 4 138 ILE n 4 139 GLY n 4 140 LEU n 4 141 LYS n 4 142 TYR n 4 143 PHE n 4 144 GLY n 4 145 ASP n 4 146 PHE n 4 147 GLU n 4 148 LYS n 4 149 ARG n 4 150 ILE n 4 151 PRO n 4 152 ARG n 4 153 GLU n 4 154 GLU n 4 155 MET n 4 156 LEU n 4 157 GLN n 4 158 MET n 4 159 GLN n 4 160 ASP n 4 161 ILE n 4 162 VAL n 4 163 LEU n 4 164 ASN n 4 165 GLU n 4 166 VAL n 4 167 LYS n 4 168 LYS n 4 169 VAL n 4 170 ASP n 4 171 SER n 4 172 GLU n 4 173 TYR n 4 174 ILE n 4 175 ALA n 4 176 THR n 4 177 VAL n 4 178 CYS n 4 179 GLY n 4 180 SER n 4 181 PHE n 4 182 ARG n 4 183 ARG n 4 184 GLY n 4 185 ALA n 4 186 GLU n 4 187 SER n 4 188 SER n 4 189 GLY n 4 190 ASP n 4 191 MET n 4 192 ASP n 4 193 VAL n 4 194 LEU n 4 195 LEU n 4 196 THR n 4 197 HIS n 4 198 PRO n 4 199 SER n 4 200 PHE n 4 201 THR n 4 202 SER n 4 203 GLU n 4 204 SER n 4 205 THR n 4 206 LYS n 4 207 GLN n 4 208 PRO n 4 209 LYS n 4 210 LEU n 4 211 LEU n 4 212 HIS n 4 213 GLN n 4 214 VAL n 4 215 VAL n 4 216 GLU n 4 217 GLN n 4 218 LEU n 4 219 GLN n 4 220 LYS n 4 221 VAL n 4 222 HIS n 4 223 PHE n 4 224 ILE n 4 225 THR n 4 226 ASP n 4 227 THR n 4 228 LEU n 4 229 SER n 4 230 LYS n 4 231 GLY n 4 232 GLU n 4 233 THR n 4 234 LYS n 4 235 PHE n 4 236 MET n 4 237 GLY n 4 238 VAL n 4 239 CYS n 4 240 GLN n 4 241 LEU n 4 242 PRO n 4 243 SER n 4 244 LYS n 4 245 ASN n 4 246 ASP n 4 247 GLU n 4 248 LYS n 4 249 GLU n 4 250 TYR n 4 251 PRO n 4 252 HIS n 4 253 ARG n 4 254 ARG n 4 255 ILE n 4 256 ASP n 4 257 ILE n 4 258 ARG n 4 259 LEU n 4 260 ILE n 4 261 PRO n 4 262 LYS n 4 263 ASP n 4 264 GLN n 4 265 TYR n 4 266 TYR n 4 267 CYS n 4 268 GLY n 4 269 VAL n 4 270 LEU n 4 271 TYR n 4 272 PHE n 4 273 THR n 4 274 GLY n 4 275 SER n 4 276 ASP n 4 277 ILE n 4 278 PHE n 4 279 ASN n 4 280 LYS n 4 281 ASN n 4 282 MET n 4 283 ARG n 4 284 ALA n 4 285 HIS n 4 286 ALA n 4 287 LEU n 4 288 GLU n 4 289 LYS n 4 290 GLY n 4 291 PHE n 4 292 THR n 4 293 ILE n 4 294 ASN n 4 295 GLU n 4 296 TYR n 4 297 THR n 4 298 ILE n 4 299 ARG n 4 300 PRO n 4 301 LEU n 4 302 GLY n 4 303 VAL n 4 304 THR n 4 305 GLY n 4 306 VAL n 4 307 ALA n 4 308 GLY n 4 309 GLU n 4 310 PRO n 4 311 LEU n 4 312 PRO n 4 313 VAL n 4 314 ASP n 4 315 SER n 4 316 GLU n 4 317 LYS n 4 318 ASP n 4 319 ILE n 4 320 PHE n 4 321 ASP n 4 322 TYR n 4 323 ILE n 4 324 GLN n 4 325 TRP n 4 326 LYS n 4 327 TYR n 4 328 ARG n 4 329 GLU n 4 330 PRO n 4 331 LYS n 4 332 ASP n 4 333 ARG n 4 334 SER n 4 335 GLU n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 335 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 16 'synthetic construct' ? 32630 ? 2 1 sample 1 10 'synthetic construct' ? 32630 ? 3 1 sample 1 5 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8NI 'DNA linking' . 'N-[(5S)-2-amino-5-formamido-6-oxo-5,6-dihydropyrimidin-4-yl]-2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosylamine' ? 'C10 H16 N5 O8 P' 365.237 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G2P non-polymer . 'PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER' ? 'C11 H18 N5 O13 P3' 521.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC T . n A 1 2 DC 2 2 2 DC DC T . n A 1 3 DG 3 3 3 DG DG T . n A 1 4 DA 4 4 4 DA DA T . n A 1 5 DC 5 5 5 DC DC T . n A 1 6 DC 6 6 6 DC DC T . n A 1 7 8NI 7 7 7 8NI FAP T . n A 1 8 DC 8 8 8 DC DC T . n A 1 9 DG 9 9 9 DG DG T . n A 1 10 DC 10 10 10 DC DC T . n A 1 11 DA 11 11 11 DA DA T . n A 1 12 DT 12 12 12 DT DT T . n A 1 13 DC 13 13 13 DC DC T . n A 1 14 DA 14 14 14 DA DA T . n A 1 15 DG 15 15 15 DG DG T . n A 1 16 DC 16 16 16 DC DC T . n B 2 1 DG 1 1 1 DG DG P . n B 2 2 DC 2 2 2 DC DC P . n B 2 3 DT 3 3 3 DT DT P . n B 2 4 DG 4 4 4 DG DG P . n B 2 5 DA 5 5 5 DA DA P . n B 2 6 DT 6 6 6 DT DT P . n B 2 7 DG 7 7 7 DG DG P . n B 2 8 DC 8 8 8 DC DC P . n B 2 9 DG 9 9 9 DG DG P . n B 2 10 DC 10 10 10 DC DC P . n C 3 1 DG 1 1 1 DG DG D . n C 3 2 DT 2 2 2 DT DT D . n C 3 3 DC 3 3 3 DC DC D . n C 3 4 DG 4 4 4 DG DG D . n C 3 5 DG 5 5 5 DG DG D . n D 4 1 MET 1 1 ? ? ? A . n D 4 2 SER 2 2 ? ? ? A . n D 4 3 LYS 3 3 ? ? ? A . n D 4 4 ARG 4 4 ? ? ? A . n D 4 5 LYS 5 5 ? ? ? A . n D 4 6 ALA 6 6 ? ? ? A . n D 4 7 PRO 7 7 ? ? ? A . n D 4 8 GLN 8 8 ? ? ? A . n D 4 9 GLU 9 9 ? ? ? A . n D 4 10 THR 10 10 10 THR THR A . n D 4 11 LEU 11 11 11 LEU LEU A . n D 4 12 ASN 12 12 12 ASN ASN A . n D 4 13 GLY 13 13 13 GLY GLY A . n D 4 14 GLY 14 14 14 GLY GLY A . n D 4 15 ILE 15 15 15 ILE ILE A . n D 4 16 THR 16 16 16 THR THR A . n D 4 17 ASP 17 17 17 ASP ASP A . n D 4 18 MET 18 18 18 MET MET A . n D 4 19 LEU 19 19 19 LEU LEU A . n D 4 20 THR 20 20 20 THR THR A . n D 4 21 GLU 21 21 21 GLU GLU A . n D 4 22 LEU 22 22 22 LEU LEU A . n D 4 23 ALA 23 23 23 ALA ALA A . n D 4 24 ASN 24 24 24 ASN ASN A . n D 4 25 PHE 25 25 25 PHE PHE A . n D 4 26 GLU 26 26 26 GLU GLU A . n D 4 27 LYS 27 27 27 LYS LYS A . n D 4 28 ASN 28 28 28 ASN ASN A . n D 4 29 VAL 29 29 29 VAL VAL A . n D 4 30 SER 30 30 30 SER SER A . n D 4 31 GLN 31 31 31 GLN GLN A . n D 4 32 ALA 32 32 32 ALA ALA A . n D 4 33 ILE 33 33 33 ILE ILE A . n D 4 34 HIS 34 34 34 HIS HIS A . n D 4 35 LYS 35 35 35 LYS LYS A . n D 4 36 TYR 36 36 36 TYR TYR A . n D 4 37 ASN 37 37 37 ASN ASN A . n D 4 38 ALA 38 38 38 ALA ALA A . n D 4 39 TYR 39 39 39 TYR TYR A . n D 4 40 ARG 40 40 40 ARG ARG A . n D 4 41 LYS 41 41 41 LYS LYS A . n D 4 42 ALA 42 42 42 ALA ALA A . n D 4 43 ALA 43 43 43 ALA ALA A . n D 4 44 SER 44 44 44 SER SER A . n D 4 45 VAL 45 45 45 VAL VAL A . n D 4 46 ILE 46 46 46 ILE ILE A . n D 4 47 ALA 47 47 47 ALA ALA A . n D 4 48 LYS 48 48 48 LYS LYS A . n D 4 49 TYR 49 49 49 TYR TYR A . n D 4 50 PRO 50 50 50 PRO PRO A . n D 4 51 HIS 51 51 51 HIS HIS A . n D 4 52 LYS 52 52 52 LYS LYS A . n D 4 53 ILE 53 53 53 ILE ILE A . n D 4 54 LYS 54 54 54 LYS LYS A . n D 4 55 SER 55 55 55 SER SER A . n D 4 56 GLY 56 56 56 GLY GLY A . n D 4 57 ALA 57 57 57 ALA ALA A . n D 4 58 GLU 58 58 58 GLU GLU A . n D 4 59 ALA 59 59 59 ALA ALA A . n D 4 60 LYS 60 60 60 LYS LYS A . n D 4 61 LYS 61 61 61 LYS LYS A . n D 4 62 LEU 62 62 62 LEU LEU A . n D 4 63 PRO 63 63 63 PRO PRO A . n D 4 64 GLY 64 64 64 GLY GLY A . n D 4 65 VAL 65 65 65 VAL VAL A . n D 4 66 GLY 66 66 66 GLY GLY A . n D 4 67 THR 67 67 67 THR THR A . n D 4 68 LYS 68 68 68 LYS LYS A . n D 4 69 ILE 69 69 69 ILE ILE A . n D 4 70 ALA 70 70 70 ALA ALA A . n D 4 71 GLU 71 71 71 GLU GLU A . n D 4 72 LYS 72 72 72 LYS LYS A . n D 4 73 ILE 73 73 73 ILE ILE A . n D 4 74 ASP 74 74 74 ASP ASP A . n D 4 75 GLU 75 75 75 GLU GLU A . n D 4 76 PHE 76 76 76 PHE PHE A . n D 4 77 LEU 77 77 77 LEU LEU A . n D 4 78 ALA 78 78 78 ALA ALA A . n D 4 79 THR 79 79 79 THR THR A . n D 4 80 GLY 80 80 80 GLY GLY A . n D 4 81 LYS 81 81 81 LYS LYS A . n D 4 82 LEU 82 82 82 LEU LEU A . n D 4 83 ARG 83 83 83 ARG ARG A . n D 4 84 LYS 84 84 84 LYS LYS A . n D 4 85 LEU 85 85 85 LEU LEU A . n D 4 86 GLU 86 86 86 GLU GLU A . n D 4 87 LYS 87 87 87 LYS LYS A . n D 4 88 ILE 88 88 88 ILE ILE A . n D 4 89 ARG 89 89 89 ARG ARG A . n D 4 90 GLN 90 90 90 GLN GLN A . n D 4 91 ASP 91 91 91 ASP ASP A . n D 4 92 ASP 92 92 92 ASP ASP A . n D 4 93 THR 93 93 93 THR THR A . n D 4 94 SER 94 94 94 SER SER A . n D 4 95 SER 95 95 95 SER SER A . n D 4 96 SER 96 96 96 SER SER A . n D 4 97 ILE 97 97 97 ILE ILE A . n D 4 98 ASN 98 98 98 ASN ASN A . n D 4 99 PHE 99 99 99 PHE PHE A . n D 4 100 LEU 100 100 100 LEU LEU A . n D 4 101 THR 101 101 101 THR THR A . n D 4 102 ARG 102 102 102 ARG ARG A . n D 4 103 VAL 103 103 103 VAL VAL A . n D 4 104 SER 104 104 104 SER SER A . n D 4 105 GLY 105 105 105 GLY GLY A . n D 4 106 ILE 106 106 106 ILE ILE A . n D 4 107 GLY 107 107 107 GLY GLY A . n D 4 108 PRO 108 108 108 PRO PRO A . n D 4 109 SER 109 109 109 SER SER A . n D 4 110 ALA 110 110 110 ALA ALA A . n D 4 111 ALA 111 111 111 ALA ALA A . n D 4 112 ARG 112 112 112 ARG ARG A . n D 4 113 LYS 113 113 113 LYS LYS A . n D 4 114 PHE 114 114 114 PHE PHE A . n D 4 115 VAL 115 115 115 VAL VAL A . n D 4 116 ASP 116 116 116 ASP ASP A . n D 4 117 GLU 117 117 117 GLU GLU A . n D 4 118 GLY 118 118 118 GLY GLY A . n D 4 119 ILE 119 119 119 ILE ILE A . n D 4 120 LYS 120 120 120 LYS LYS A . n D 4 121 THR 121 121 121 THR THR A . n D 4 122 LEU 122 122 122 LEU LEU A . n D 4 123 GLU 123 123 123 GLU GLU A . n D 4 124 ASP 124 124 124 ASP ASP A . n D 4 125 LEU 125 125 125 LEU LEU A . n D 4 126 ARG 126 126 126 ARG ARG A . n D 4 127 LYS 127 127 127 LYS LYS A . n D 4 128 ASN 128 128 128 ASN ASN A . n D 4 129 GLU 129 129 129 GLU GLU A . n D 4 130 ASP 130 130 130 ASP ASP A . n D 4 131 LYS 131 131 131 LYS LYS A . n D 4 132 LEU 132 132 132 LEU LEU A . n D 4 133 ASN 133 133 133 ASN ASN A . n D 4 134 HIS 134 134 134 HIS HIS A . n D 4 135 HIS 135 135 135 HIS HIS A . n D 4 136 GLN 136 136 136 GLN GLN A . n D 4 137 ARG 137 137 137 ARG ARG A . n D 4 138 ILE 138 138 138 ILE ILE A . n D 4 139 GLY 139 139 139 GLY GLY A . n D 4 140 LEU 140 140 140 LEU LEU A . n D 4 141 LYS 141 141 141 LYS LYS A . n D 4 142 TYR 142 142 142 TYR TYR A . n D 4 143 PHE 143 143 143 PHE PHE A . n D 4 144 GLY 144 144 144 GLY GLY A . n D 4 145 ASP 145 145 145 ASP ASP A . n D 4 146 PHE 146 146 146 PHE PHE A . n D 4 147 GLU 147 147 147 GLU GLU A . n D 4 148 LYS 148 148 148 LYS LYS A . n D 4 149 ARG 149 149 149 ARG ARG A . n D 4 150 ILE 150 150 150 ILE ILE A . n D 4 151 PRO 151 151 151 PRO PRO A . n D 4 152 ARG 152 152 152 ARG ARG A . n D 4 153 GLU 153 153 153 GLU GLU A . n D 4 154 GLU 154 154 154 GLU GLU A . n D 4 155 MET 155 155 155 MET MET A . n D 4 156 LEU 156 156 156 LEU LEU A . n D 4 157 GLN 157 157 157 GLN GLN A . n D 4 158 MET 158 158 158 MET MET A . n D 4 159 GLN 159 159 159 GLN GLN A . n D 4 160 ASP 160 160 160 ASP ASP A . n D 4 161 ILE 161 161 161 ILE ILE A . n D 4 162 VAL 162 162 162 VAL VAL A . n D 4 163 LEU 163 163 163 LEU LEU A . n D 4 164 ASN 164 164 164 ASN ASN A . n D 4 165 GLU 165 165 165 GLU GLU A . n D 4 166 VAL 166 166 166 VAL VAL A . n D 4 167 LYS 167 167 167 LYS LYS A . n D 4 168 LYS 168 168 168 LYS LYS A . n D 4 169 VAL 169 169 169 VAL VAL A . n D 4 170 ASP 170 170 170 ASP ASP A . n D 4 171 SER 171 171 171 SER SER A . n D 4 172 GLU 172 172 172 GLU GLU A . n D 4 173 TYR 173 173 173 TYR TYR A . n D 4 174 ILE 174 174 174 ILE ILE A . n D 4 175 ALA 175 175 175 ALA ALA A . n D 4 176 THR 176 176 176 THR THR A . n D 4 177 VAL 177 177 177 VAL VAL A . n D 4 178 CYS 178 178 178 CYS CYS A . n D 4 179 GLY 179 179 179 GLY GLY A . n D 4 180 SER 180 180 180 SER SER A . n D 4 181 PHE 181 181 181 PHE PHE A . n D 4 182 ARG 182 182 182 ARG ARG A . n D 4 183 ARG 183 183 183 ARG ARG A . n D 4 184 GLY 184 184 184 GLY GLY A . n D 4 185 ALA 185 185 185 ALA ALA A . n D 4 186 GLU 186 186 186 GLU GLU A . n D 4 187 SER 187 187 187 SER SER A . n D 4 188 SER 188 188 188 SER SER A . n D 4 189 GLY 189 189 189 GLY GLY A . n D 4 190 ASP 190 190 190 ASP ASP A . n D 4 191 MET 191 191 191 MET MET A . n D 4 192 ASP 192 192 192 ASP ASP A . n D 4 193 VAL 193 193 193 VAL VAL A . n D 4 194 LEU 194 194 194 LEU LEU A . n D 4 195 LEU 195 195 195 LEU LEU A . n D 4 196 THR 196 196 196 THR THR A . n D 4 197 HIS 197 197 197 HIS HIS A . n D 4 198 PRO 198 198 198 PRO PRO A . n D 4 199 SER 199 199 199 SER SER A . n D 4 200 PHE 200 200 200 PHE PHE A . n D 4 201 THR 201 201 201 THR THR A . n D 4 202 SER 202 202 202 SER SER A . n D 4 203 GLU 203 203 203 GLU GLU A . n D 4 204 SER 204 204 204 SER SER A . n D 4 205 THR 205 205 205 THR THR A . n D 4 206 LYS 206 206 206 LYS LYS A . n D 4 207 GLN 207 207 207 GLN GLN A . n D 4 208 PRO 208 208 208 PRO PRO A . n D 4 209 LYS 209 209 209 LYS LYS A . n D 4 210 LEU 210 210 210 LEU LEU A . n D 4 211 LEU 211 211 211 LEU LEU A . n D 4 212 HIS 212 212 212 HIS HIS A . n D 4 213 GLN 213 213 213 GLN GLN A . n D 4 214 VAL 214 214 214 VAL VAL A . n D 4 215 VAL 215 215 215 VAL VAL A . n D 4 216 GLU 216 216 216 GLU GLU A . n D 4 217 GLN 217 217 217 GLN GLN A . n D 4 218 LEU 218 218 218 LEU LEU A . n D 4 219 GLN 219 219 219 GLN GLN A . n D 4 220 LYS 220 220 220 LYS LYS A . n D 4 221 VAL 221 221 221 VAL VAL A . n D 4 222 HIS 222 222 222 HIS HIS A . n D 4 223 PHE 223 223 223 PHE PHE A . n D 4 224 ILE 224 224 224 ILE ILE A . n D 4 225 THR 225 225 225 THR THR A . n D 4 226 ASP 226 226 226 ASP ASP A . n D 4 227 THR 227 227 227 THR THR A . n D 4 228 LEU 228 228 228 LEU LEU A . n D 4 229 SER 229 229 229 SER SER A . n D 4 230 LYS 230 230 230 LYS LYS A . n D 4 231 GLY 231 231 231 GLY GLY A . n D 4 232 GLU 232 232 232 GLU GLU A . n D 4 233 THR 233 233 233 THR THR A . n D 4 234 LYS 234 234 234 LYS LYS A . n D 4 235 PHE 235 235 235 PHE PHE A . n D 4 236 MET 236 236 236 MET MET A . n D 4 237 GLY 237 237 237 GLY GLY A . n D 4 238 VAL 238 238 238 VAL VAL A . n D 4 239 CYS 239 239 239 CYS CYS A . n D 4 240 GLN 240 240 240 GLN GLN A . n D 4 241 LEU 241 241 241 LEU LEU A . n D 4 242 PRO 242 242 242 PRO PRO A . n D 4 243 SER 243 243 243 SER SER A . n D 4 244 LYS 244 244 244 LYS LYS A . n D 4 245 ASN 245 245 245 ASN ASN A . n D 4 246 ASP 246 246 246 ASP ASP A . n D 4 247 GLU 247 247 247 GLU GLU A . n D 4 248 LYS 248 248 248 LYS LYS A . n D 4 249 GLU 249 249 249 GLU GLU A . n D 4 250 TYR 250 250 250 TYR TYR A . n D 4 251 PRO 251 251 251 PRO PRO A . n D 4 252 HIS 252 252 252 HIS HIS A . n D 4 253 ARG 253 253 253 ARG ARG A . n D 4 254 ARG 254 254 254 ARG ARG A . n D 4 255 ILE 255 255 255 ILE ILE A . n D 4 256 ASP 256 256 256 ASP ASP A . n D 4 257 ILE 257 257 257 ILE ILE A . n D 4 258 ARG 258 258 258 ARG ARG A . n D 4 259 LEU 259 259 259 LEU LEU A . n D 4 260 ILE 260 260 260 ILE ILE A . n D 4 261 PRO 261 261 261 PRO PRO A . n D 4 262 LYS 262 262 262 LYS LYS A . n D 4 263 ASP 263 263 263 ASP ASP A . n D 4 264 GLN 264 264 264 GLN GLN A . n D 4 265 TYR 265 265 265 TYR TYR A . n D 4 266 TYR 266 266 266 TYR TYR A . n D 4 267 CYS 267 267 267 CYS CYS A . n D 4 268 GLY 268 268 268 GLY GLY A . n D 4 269 VAL 269 269 269 VAL VAL A . n D 4 270 LEU 270 270 270 LEU LEU A . n D 4 271 TYR 271 271 271 TYR TYR A . n D 4 272 PHE 272 272 272 PHE PHE A . n D 4 273 THR 273 273 273 THR THR A . n D 4 274 GLY 274 274 274 GLY GLY A . n D 4 275 SER 275 275 275 SER SER A . n D 4 276 ASP 276 276 276 ASP ASP A . n D 4 277 ILE 277 277 277 ILE ILE A . n D 4 278 PHE 278 278 278 PHE PHE A . n D 4 279 ASN 279 279 279 ASN ASN A . n D 4 280 LYS 280 280 280 LYS LYS A . n D 4 281 ASN 281 281 281 ASN ASN A . n D 4 282 MET 282 282 282 MET MET A . n D 4 283 ARG 283 283 283 ARG ARG A . n D 4 284 ALA 284 284 284 ALA ALA A . n D 4 285 HIS 285 285 285 HIS HIS A . n D 4 286 ALA 286 286 286 ALA ALA A . n D 4 287 LEU 287 287 287 LEU LEU A . n D 4 288 GLU 288 288 288 GLU GLU A . n D 4 289 LYS 289 289 289 LYS LYS A . n D 4 290 GLY 290 290 290 GLY GLY A . n D 4 291 PHE 291 291 291 PHE PHE A . n D 4 292 THR 292 292 292 THR THR A . n D 4 293 ILE 293 293 293 ILE ILE A . n D 4 294 ASN 294 294 294 ASN ASN A . n D 4 295 GLU 295 295 295 GLU GLU A . n D 4 296 TYR 296 296 296 TYR TYR A . n D 4 297 THR 297 297 297 THR THR A . n D 4 298 ILE 298 298 298 ILE ILE A . n D 4 299 ARG 299 299 299 ARG ARG A . n D 4 300 PRO 300 300 300 PRO PRO A . n D 4 301 LEU 301 301 ? ? ? A . n D 4 302 GLY 302 302 ? ? ? A . n D 4 303 VAL 303 303 ? ? ? A . n D 4 304 THR 304 304 ? ? ? A . n D 4 305 GLY 305 305 ? ? ? A . n D 4 306 VAL 306 306 ? ? ? A . n D 4 307 ALA 307 307 307 ALA ALA A . n D 4 308 GLY 308 308 308 GLY GLY A . n D 4 309 GLU 309 309 309 GLU GLU A . n D 4 310 PRO 310 310 310 PRO PRO A . n D 4 311 LEU 311 311 311 LEU LEU A . n D 4 312 PRO 312 312 312 PRO PRO A . n D 4 313 VAL 313 313 313 VAL VAL A . n D 4 314 ASP 314 314 314 ASP ASP A . n D 4 315 SER 315 315 315 SER SER A . n D 4 316 GLU 316 316 316 GLU GLU A . n D 4 317 LYS 317 317 317 LYS LYS A . n D 4 318 ASP 318 318 318 ASP ASP A . n D 4 319 ILE 319 319 319 ILE ILE A . n D 4 320 PHE 320 320 320 PHE PHE A . n D 4 321 ASP 321 321 321 ASP ASP A . n D 4 322 TYR 322 322 322 TYR TYR A . n D 4 323 ILE 323 323 323 ILE ILE A . n D 4 324 GLN 324 324 324 GLN GLN A . n D 4 325 TRP 325 325 325 TRP TRP A . n D 4 326 LYS 326 326 326 LYS LYS A . n D 4 327 TYR 327 327 327 TYR TYR A . n D 4 328 ARG 328 328 328 ARG ARG A . n D 4 329 GLU 329 329 329 GLU GLU A . n D 4 330 PRO 330 330 330 PRO PRO A . n D 4 331 LYS 331 331 331 LYS LYS A . n D 4 332 ASP 332 332 332 ASP ASP A . n D 4 333 ARG 333 333 333 ARG ARG A . n D 4 334 SER 334 334 334 SER SER A . n D 4 335 GLU 335 335 335 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 G2P 1 401 11 G2P LIG A . F 6 NA 1 402 341 NA NA A . G 6 NA 1 403 342 NA NA A . H 7 MN 1 404 1 MN MN A . I 7 MN 1 405 2 MN MN A . J 8 HOH 1 101 56 HOH HOH T . J 8 HOH 2 102 39 HOH HOH T . J 8 HOH 3 103 36 HOH HOH T . J 8 HOH 4 104 119 HOH HOH T . J 8 HOH 5 105 26 HOH HOH T . J 8 HOH 6 106 22 HOH HOH T . J 8 HOH 7 107 81 HOH HOH T . J 8 HOH 8 108 117 HOH HOH T . J 8 HOH 9 109 46 HOH HOH T . J 8 HOH 10 110 62 HOH HOH T . J 8 HOH 11 111 110 HOH HOH T . J 8 HOH 12 112 112 HOH HOH T . J 8 HOH 13 113 10 HOH HOH T . K 8 HOH 1 101 77 HOH HOH P . K 8 HOH 2 102 58 HOH HOH P . K 8 HOH 3 103 50 HOH HOH P . K 8 HOH 4 104 101 HOH HOH P . K 8 HOH 5 105 33 HOH HOH P . K 8 HOH 6 106 47 HOH HOH P . K 8 HOH 7 107 84 HOH HOH P . K 8 HOH 8 108 94 HOH HOH P . L 8 HOH 1 101 120 HOH HOH D . L 8 HOH 2 102 34 HOH HOH D . L 8 HOH 3 103 45 HOH HOH D . L 8 HOH 4 104 111 HOH HOH D . L 8 HOH 5 105 102 HOH HOH D . L 8 HOH 6 106 61 HOH HOH D . M 8 HOH 1 501 32 HOH HOH A . M 8 HOH 2 502 5 HOH HOH A . M 8 HOH 3 503 40 HOH HOH A . M 8 HOH 4 504 99 HOH HOH A . M 8 HOH 5 505 97 HOH HOH A . M 8 HOH 6 506 108 HOH HOH A . M 8 HOH 7 507 72 HOH HOH A . M 8 HOH 8 508 21 HOH HOH A . M 8 HOH 9 509 82 HOH HOH A . M 8 HOH 10 510 89 HOH HOH A . M 8 HOH 11 511 25 HOH HOH A . M 8 HOH 12 512 106 HOH HOH A . M 8 HOH 13 513 44 HOH HOH A . M 8 HOH 14 514 73 HOH HOH A . M 8 HOH 15 515 38 HOH HOH A . M 8 HOH 16 516 52 HOH HOH A . M 8 HOH 17 517 67 HOH HOH A . M 8 HOH 18 518 9 HOH HOH A . M 8 HOH 19 519 28 HOH HOH A . M 8 HOH 20 520 95 HOH HOH A . M 8 HOH 21 521 79 HOH HOH A . M 8 HOH 22 522 68 HOH HOH A . M 8 HOH 23 523 116 HOH HOH A . M 8 HOH 24 524 65 HOH HOH A . M 8 HOH 25 525 78 HOH HOH A . M 8 HOH 26 526 64 HOH HOH A . M 8 HOH 27 527 29 HOH HOH A . M 8 HOH 28 528 63 HOH HOH A . M 8 HOH 29 529 122 HOH HOH A . M 8 HOH 30 530 114 HOH HOH A . M 8 HOH 31 531 93 HOH HOH A . M 8 HOH 32 532 70 HOH HOH A . M 8 HOH 33 533 14 HOH HOH A . M 8 HOH 34 534 92 HOH HOH A . M 8 HOH 35 535 71 HOH HOH A . M 8 HOH 36 536 24 HOH HOH A . M 8 HOH 37 537 57 HOH HOH A . M 8 HOH 38 538 60 HOH HOH A . M 8 HOH 39 539 104 HOH HOH A . M 8 HOH 40 540 85 HOH HOH A . M 8 HOH 41 541 76 HOH HOH A . M 8 HOH 42 542 15 HOH HOH A . M 8 HOH 43 543 74 HOH HOH A . M 8 HOH 44 544 123 HOH HOH A . M 8 HOH 45 545 80 HOH HOH A . M 8 HOH 46 546 109 HOH HOH A . M 8 HOH 47 547 30 HOH HOH A . M 8 HOH 48 548 18 HOH HOH A . M 8 HOH 49 549 41 HOH HOH A . M 8 HOH 50 550 88 HOH HOH A . M 8 HOH 51 551 75 HOH HOH A . M 8 HOH 52 552 115 HOH HOH A . M 8 HOH 53 553 121 HOH HOH A . M 8 HOH 54 554 35 HOH HOH A . M 8 HOH 55 555 23 HOH HOH A . M 8 HOH 56 556 59 HOH HOH A . M 8 HOH 57 557 105 HOH HOH A . M 8 HOH 58 558 107 HOH HOH A . M 8 HOH 59 559 48 HOH HOH A . M 8 HOH 60 560 118 HOH HOH A . M 8 HOH 61 561 83 HOH HOH A . M 8 HOH 62 562 124 HOH HOH A . M 8 HOH 63 563 96 HOH HOH A . M 8 HOH 64 564 8 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 83 ? CG ? D ARG 83 CG 2 1 Y 1 A ARG 83 ? CD ? D ARG 83 CD 3 1 Y 1 A ARG 83 ? NE ? D ARG 83 NE 4 1 Y 1 A ARG 83 ? CZ ? D ARG 83 CZ 5 1 Y 1 A ARG 83 ? NH1 ? D ARG 83 NH1 6 1 Y 1 A ARG 83 ? NH2 ? D ARG 83 NH2 7 1 Y 1 A LYS 244 ? CG ? D LYS 244 CG 8 1 Y 1 A LYS 244 ? CD ? D LYS 244 CD 9 1 Y 1 A LYS 244 ? CE ? D LYS 244 CE 10 1 Y 1 A LYS 244 ? NZ ? D LYS 244 NZ 11 1 Y 1 A LYS 248 ? CG ? D LYS 248 CG 12 1 Y 1 A LYS 248 ? CD ? D LYS 248 CD 13 1 Y 1 A LYS 248 ? CE ? D LYS 248 CE 14 1 Y 1 A LYS 248 ? NZ ? D LYS 248 NZ 15 1 Y 1 A LYS 280 ? CG ? D LYS 280 CG 16 1 Y 1 A LYS 280 ? CD ? D LYS 280 CD 17 1 Y 1 A LYS 280 ? CE ? D LYS 280 CE 18 1 Y 1 A LYS 280 ? NZ ? D LYS 280 NZ 19 1 N 1 A G2P 401 ? "O2'" ? E G2P 1 "O2'" # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? . 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 6 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 108.260 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8VFA _cell.details ? _cell.formula_units_Z ? _cell.length_a 54.437 _cell.length_a_esd ? _cell.length_b 79.531 _cell.length_b_esd ? _cell.length_c 54.889 _cell.length_c_esd ? _cell.volume 225671.638 _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8VFA _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8VFA _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.37 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;14-22% PEG 3350 0.05 M Imidazole pH 8.0 0.35 M Sodium Acetate ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 R 200K-A' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-05-29 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 24.92 _reflns.entry_id 8VFA _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.05 _reflns.d_resolution_low 25.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 38424 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.6 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 24.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.09 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1274 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.828 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 33.63 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8VFA _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.05 _refine.ls_d_res_low 24.94 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 38424 _refine.ls_number_reflns_R_free 2814 _refine.ls_number_reflns_R_work 35610 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 70.21 _refine.ls_percent_reflns_R_free 7.32 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2286 _refine.ls_R_factor_R_free 0.2667 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2256 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.0828 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2732 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 24.94 _refine_hist.number_atoms_solvent 91 _refine_hist.number_atoms_total 3315 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2559 _refine_hist.pdbx_number_atoms_nucleic_acid 630 _refine_hist.pdbx_number_atoms_ligand 35 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0111 ? 3367 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.4225 ? 4671 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0994 ? 508 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0328 ? 495 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 23.0906 ? 1313 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.05 2.09 . . 68 894 35.17 . . . . 0.2790 . . . . . . . . . . . 0.3090 'X-RAY DIFFRACTION' 2.09 2.12 . . 81 1009 39.81 . . . . 0.2701 . . . . . . . . . . . 0.2882 'X-RAY DIFFRACTION' 2.12 2.17 . . 90 1105 44.03 . . . . 0.2892 . . . . . . . . . . . 0.3011 'X-RAY DIFFRACTION' 2.17 2.21 . . 94 1223 47.56 . . . . 0.2797 . . . . . . . . . . . 0.3035 'X-RAY DIFFRACTION' 2.21 2.26 . . 99 1237 49.44 . . . . 0.2847 . . . . . . . . . . . 0.3078 'X-RAY DIFFRACTION' 2.26 2.31 . . 101 1285 50.88 . . . . 0.2936 . . . . . . . . . . . 0.2884 'X-RAY DIFFRACTION' 2.31 2.37 . . 105 1312 50.88 . . . . 0.2979 . . . . . . . . . . . 0.3681 'X-RAY DIFFRACTION' 2.37 2.43 . . 111 1294 52.23 . . . . 0.2882 . . . . . . . . . . . 0.3127 'X-RAY DIFFRACTION' 2.43 2.50 . . 113 1387 54.68 . . . . 0.2824 . . . . . . . . . . . 0.3463 'X-RAY DIFFRACTION' 2.50 2.58 . . 112 1558 60.73 . . . . 0.2586 . . . . . . . . . . . 0.2989 'X-RAY DIFFRACTION' 2.58 2.68 . . 134 1739 68.51 . . . . 0.2684 . . . . . . . . . . . 0.3582 'X-RAY DIFFRACTION' 2.68 2.78 . . 152 1971 78.14 . . . . 0.2572 . . . . . . . . . . . 0.3293 'X-RAY DIFFRACTION' 2.78 2.91 . . 185 2242 87.49 . . . . 0.2627 . . . . . . . . . . . 0.2782 'X-RAY DIFFRACTION' 2.91 3.06 . . 183 2397 93.89 . . . . 0.2703 . . . . . . . . . . . 0.2867 'X-RAY DIFFRACTION' 3.06 3.25 . . 186 2441 97.91 . . . . 0.2515 . . . . . . . . . . . 0.2769 'X-RAY DIFFRACTION' 3.25 3.50 . . 200 2513 98.40 . . . . 0.2159 . . . . . . . . . . . 0.2542 'X-RAY DIFFRACTION' 3.51 3.86 . . 206 2520 98.55 . . . . 0.2036 . . . . . . . . . . . 0.2673 'X-RAY DIFFRACTION' 3.86 4.41 . . 199 2496 98.79 . . . . 0.1759 . . . . . . . . . . . 0.2294 'X-RAY DIFFRACTION' 4.41 5.55 . . 196 2505 98.94 . . . . 0.1919 . . . . . . . . . . . 0.2157 'X-RAY DIFFRACTION' 5.55 24.94 . . 199 2482 97.88 . . . . 0.1806 . . . . . . . . . . . 0.2276 # _struct.entry_id 8VFA _struct.title 'Ternary DNA Polymerase Beta bound to DNA containing primer terminal dC base-paired with FapydG' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8VFA _struct_keywords.text 'FapydG, Polymerase Beta, primer terminus, Pol Beta, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 7 ? I N N 7 ? J N N 8 ? K N N 8 ? L N N 8 ? M N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8VFA 8VFA ? 1 ? 1 2 PDB 8VFA 8VFA ? 2 ? 1 3 PDB 8VFA 8VFA ? 3 ? 1 4 UNP DPOLB_HUMAN P06746 ? 4 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8VFA T 1 ? 16 ? 8VFA 1 ? 16 ? 1 16 2 2 8VFA P 1 ? 10 ? 8VFA 1 ? 10 ? 1 10 3 3 8VFA D 1 ? 5 ? 8VFA 1 ? 5 ? 1 5 4 4 8VFA A 1 ? 335 ? P06746 1 ? 335 ? 1 335 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5670 ? 1 MORE -64 ? 1 'SSA (A^2)' 19450 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN D 12 ? VAL D 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 AA2 ALA D 32 ? TYR D 49 ? ALA A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 AA3 SER D 55 ? LYS D 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 AA4 GLY D 66 ? GLY D 80 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 AA5 LEU D 82 ? ASP D 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 AA6 ASP D 91 ? THR D 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 AA7 GLY D 107 ? GLU D 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 AA8 THR D 121 ? LYS D 127 ? THR A 121 LYS A 127 1 ? 7 HELX_P HELX_P9 AA9 ASN D 128 ? LEU D 132 ? ASN A 128 LEU A 132 5 ? 5 HELX_P HELX_P10 AB1 ASN D 133 ? TYR D 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 AB2 TYR D 142 ? LYS D 148 ? TYR A 142 LYS A 148 1 ? 7 HELX_P HELX_P12 AB3 ARG D 152 ? ASP D 170 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 AB4 GLY D 179 ? GLY D 184 ? GLY A 179 GLY A 184 5 ? 6 HELX_P HELX_P14 AB5 LYS D 209 ? VAL D 221 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 AB6 PRO D 261 ? ASP D 263 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 AB7 GLN D 264 ? GLY D 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 AB8 SER D 275 ? LEU D 287 ? SER A 275 LEU A 287 1 ? 13 HELX_P HELX_P18 AB9 SER D 315 ? ILE D 323 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 AC1 GLU D 329 ? ARG D 333 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 6 "O3'" ? ? ? 1_555 A 8NI 7 P ? ? T DC 6 T 8NI 7 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale2 covale both ? A 8NI 7 "O3'" ? ? ? 1_555 A DC 8 P ? ? T 8NI 7 T DC 8 1_555 ? ? ? ? ? ? ? 1.605 ? ? metalc1 metalc ? ? B DG 9 OP1 ? ? ? 1_555 F NA . NA ? ? P DG 9 A NA 402 1_555 ? ? ? ? ? ? ? 2.418 ? ? metalc2 metalc ? ? K HOH . O ? ? ? 1_555 I MN . MN ? ? P HOH 101 A MN 405 1_555 ? ? ? ? ? ? ? 2.613 ? ? metalc3 metalc ? ? K HOH . O ? ? ? 1_555 F NA . NA ? ? P HOH 103 A NA 402 1_555 ? ? ? ? ? ? ? 2.660 ? ? metalc4 metalc ? ? C DC 3 OP1 ? ? ? 1_555 G NA . NA ? ? D DC 3 A NA 403 1_555 ? ? ? ? ? ? ? 2.908 ? ? metalc5 metalc ? ? L HOH . O ? ? ? 1_555 G NA . NA ? ? D HOH 103 A NA 403 1_555 ? ? ? ? ? ? ? 2.552 ? ? metalc6 metalc ? ? D LYS 60 O ? ? ? 1_555 G NA . NA ? ? A LYS 60 A NA 403 1_555 ? ? ? ? ? ? ? 2.312 ? ? metalc7 metalc ? ? D LEU 62 O ? ? ? 1_555 G NA . NA ? ? A LEU 62 A NA 403 1_555 ? ? ? ? ? ? ? 2.565 ? ? metalc8 metalc ? ? D VAL 65 O ? ? ? 1_555 G NA . NA ? ? A VAL 65 A NA 403 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc9 metalc ? ? D THR 101 O ? ? ? 1_555 F NA . NA ? ? A THR 101 A NA 402 1_555 ? ? ? ? ? ? ? 2.199 ? ? metalc10 metalc ? ? D VAL 103 O ? ? ? 1_555 F NA . NA ? ? A VAL 103 A NA 402 1_555 ? ? ? ? ? ? ? 2.450 ? ? metalc11 metalc ? ? D ILE 106 O ? ? ? 1_555 F NA . NA ? ? A ILE 106 A NA 402 1_555 ? ? ? ? ? ? ? 2.330 ? ? metalc12 metalc ? ? D ASP 190 OD1 ? ? ? 1_555 H MN . MN ? ? A ASP 190 A MN 404 1_555 ? ? ? ? ? ? ? 2.229 ? ? metalc13 metalc ? ? D ASP 190 OD2 ? ? ? 1_555 I MN . MN ? ? A ASP 190 A MN 405 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc14 metalc ? ? D ASP 192 OD2 ? ? ? 1_555 H MN . MN ? ? A ASP 192 A MN 404 1_555 ? ? ? ? ? ? ? 2.140 ? ? metalc15 metalc ? ? D ASP 192 OD1 ? ? ? 1_555 I MN . MN ? ? A ASP 192 A MN 405 1_555 ? ? ? ? ? ? ? 2.230 ? ? metalc16 metalc ? ? D ASP 256 OD2 ? ? ? 1_555 I MN . MN ? ? A ASP 256 A MN 405 1_555 ? ? ? ? ? ? ? 2.214 ? ? metalc17 metalc ? ? E G2P . O2G ? ? ? 1_555 H MN . MN ? ? A G2P 401 A MN 404 1_555 ? ? ? ? ? ? ? 2.542 ? ? metalc18 metalc ? ? E G2P . O1B ? ? ? 1_555 H MN . MN ? ? A G2P 401 A MN 404 1_555 ? ? ? ? ? ? ? 2.231 ? ? metalc19 metalc ? ? E G2P . O1A ? ? ? 1_555 H MN . MN ? ? A G2P 401 A MN 404 1_555 ? ? ? ? ? ? ? 2.268 ? ? metalc20 metalc ? ? E G2P . O1A ? ? ? 1_555 I MN . MN ? ? A G2P 401 A MN 405 1_555 ? ? ? ? ? ? ? 2.339 ? ? metalc21 metalc ? ? F NA . NA ? ? ? 1_555 M HOH . O ? ? A NA 402 A HOH 555 1_555 ? ? ? ? ? ? ? 2.520 ? ? metalc22 metalc ? ? G NA . NA ? ? ? 1_555 M HOH . O ? ? A NA 403 A HOH 562 1_555 ? ? ? ? ? ? ? 2.187 ? ? metalc23 metalc ? ? H MN . MN ? ? ? 1_555 M HOH . O ? ? A MN 404 A HOH 532 1_555 ? ? ? ? ? ? ? 2.402 ? ? metalc24 metalc ? ? I MN . MN ? ? ? 1_555 M HOH . O ? ? A MN 405 A HOH 544 1_555 ? ? ? ? ? ? ? 2.286 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 C DG 5 N1 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 C DG 5 O6 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 C DG 5 N2 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 C DC 3 N3 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 C DC 3 O2 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 C DC 3 N4 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 C DT 2 N3 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 C DT 2 O4 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 C DG 1 N1 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 C DG 1 O6 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 C DG 1 N2 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 9 N1 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 9 O6 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 9 N2 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 8 N3 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 8 O2 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 8 N4 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 7 N1 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 7 O6 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 7 N2 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 6 N3 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 6 O4 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 5 N1 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 5 N6 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 4 N1 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 4 O6 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 4 N2 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 3 N3 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 3 O4 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 2 N3 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 2 O2 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 2 N4 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 1 N1 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 1 O6 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 1 N2 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? K HOH . ? P HOH 103 ? 1_555 82.2 ? 2 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? D THR 101 ? A THR 101 ? 1_555 162.5 ? 3 O ? K HOH . ? P HOH 103 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? D THR 101 ? A THR 101 ? 1_555 84.3 ? 4 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 97.7 ? 5 O ? K HOH . ? P HOH 103 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 179.2 ? 6 O ? D THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 95.7 ? 7 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 95.3 ? 8 O ? K HOH . ? P HOH 103 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 90.2 ? 9 O ? D THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 95.8 ? 10 O ? D VAL 103 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 90.6 ? 11 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? M HOH . ? A HOH 555 ? 1_555 90.4 ? 12 O ? K HOH . ? P HOH 103 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? M HOH . ? A HOH 555 ? 1_555 90.6 ? 13 O ? D THR 101 ? A THR 101 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? M HOH . ? A HOH 555 ? 1_555 78.6 ? 14 O ? D VAL 103 ? A VAL 103 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? M HOH . ? A HOH 555 ? 1_555 88.5 ? 15 O ? D ILE 106 ? A ILE 106 ? 1_555 NA ? F NA . ? A NA 402 ? 1_555 O ? M HOH . ? A HOH 555 ? 1_555 174.3 ? 16 O ? K HOH . ? P HOH 101 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 76.6 ? 17 O ? K HOH . ? P HOH 101 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 164.4 ? 18 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 117.2 ? 19 O ? K HOH . ? P HOH 101 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 88.9 ? 20 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 95.0 ? 21 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 96.7 ? 22 O ? K HOH . ? P HOH 101 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O1A ? E G2P . ? A G2P 401 ? 1_555 79.5 ? 23 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O1A ? E G2P . ? A G2P 401 ? 1_555 88.4 ? 24 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O1A ? E G2P . ? A G2P 401 ? 1_555 93.1 ? 25 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O1A ? E G2P . ? A G2P 401 ? 1_555 166.8 ? 26 O ? K HOH . ? P HOH 101 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O ? M HOH . ? A HOH 544 ? 1_555 87.6 ? 27 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O ? M HOH . ? A HOH 544 ? 1_555 164.1 ? 28 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O ? M HOH . ? A HOH 544 ? 1_555 78.6 ? 29 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O ? M HOH . ? A HOH 544 ? 1_555 84.6 ? 30 O1A ? E G2P . ? A G2P 401 ? 1_555 MN ? I MN . ? A MN 405 ? 1_555 O ? M HOH . ? A HOH 544 ? 1_555 88.7 ? 31 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? L HOH . ? D HOH 103 ? 1_555 78.9 ? 32 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? D LYS 60 ? A LYS 60 ? 1_555 176.1 ? 33 O ? L HOH . ? D HOH 103 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? D LYS 60 ? A LYS 60 ? 1_555 102.6 ? 34 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 89.0 ? 35 O ? L HOH . ? D HOH 103 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 167.8 ? 36 O ? D LYS 60 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 89.5 ? 37 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 79.7 ? 38 O ? L HOH . ? D HOH 103 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 84.2 ? 39 O ? D LYS 60 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 96.8 ? 40 O ? D LEU 62 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 92.9 ? 41 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? M HOH . ? A HOH 562 ? 1_555 90.3 ? 42 O ? L HOH . ? D HOH 103 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? M HOH . ? A HOH 562 ? 1_555 94.4 ? 43 O ? D LYS 60 ? A LYS 60 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? M HOH . ? A HOH 562 ? 1_555 93.2 ? 44 O ? D LEU 62 ? A LEU 62 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? M HOH . ? A HOH 562 ? 1_555 86.4 ? 45 O ? D VAL 65 ? A VAL 65 ? 1_555 NA ? G NA . ? A NA 403 ? 1_555 O ? M HOH . ? A HOH 562 ? 1_555 170.0 ? 46 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 100.8 ? 47 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O2G ? E G2P . ? A G2P 401 ? 1_555 79.9 ? 48 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O2G ? E G2P . ? A G2P 401 ? 1_555 169.8 ? 49 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O1B ? E G2P . ? A G2P 401 ? 1_555 169.2 ? 50 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O1B ? E G2P . ? A G2P 401 ? 1_555 88.2 ? 51 O2G ? E G2P . ? A G2P 401 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O1B ? E G2P . ? A G2P 401 ? 1_555 90.2 ? 52 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O1A ? E G2P . ? A G2P 401 ? 1_555 90.4 ? 53 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O1A ? E G2P . ? A G2P 401 ? 1_555 104.5 ? 54 O2G ? E G2P . ? A G2P 401 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O1A ? E G2P . ? A G2P 401 ? 1_555 85.6 ? 55 O1B ? E G2P . ? A G2P 401 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O1A ? E G2P . ? A G2P 401 ? 1_555 93.1 ? 56 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? M HOH . ? A HOH 532 ? 1_555 93.5 ? 57 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? M HOH . ? A HOH 532 ? 1_555 75.5 ? 58 O2G ? E G2P . ? A G2P 401 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? M HOH . ? A HOH 532 ? 1_555 94.4 ? 59 O1B ? E G2P . ? A G2P 401 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? M HOH . ? A HOH 532 ? 1_555 82.9 ? 60 O1A ? E G2P . ? A G2P 401 ? 1_555 MN ? H MN . ? A MN 404 ? 1_555 O ? M HOH . ? A HOH 532 ? 1_555 176.0 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 274 _struct_mon_prot_cis.label_asym_id D _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 275 _struct_mon_prot_cis.pdbx_label_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 6.04 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE D 150 ? PRO D 151 ? ILE A 150 PRO A 151 AA1 2 SER D 187 ? SER D 188 ? SER A 187 SER A 188 AA2 1 ILE D 174 ? CYS D 178 ? ILE A 174 CYS A 178 AA2 2 MET D 191 ? THR D 196 ? MET A 191 THR A 196 AA2 3 ARG D 253 ? LEU D 259 ? ARG A 253 LEU A 259 AA2 4 LYS D 234 ? CYS D 239 ? LYS A 234 CYS A 239 AA2 5 ILE D 224 ? LYS D 230 ? ILE A 224 LYS A 230 AA3 1 PHE D 200 ? THR D 201 ? PHE A 200 THR A 201 AA3 2 SER D 204 ? THR D 205 ? SER A 204 THR A 205 AA4 1 THR D 292 ? ILE D 293 ? THR A 292 ILE A 293 AA4 2 ILE D 298 ? ARG D 299 ? ILE A 298 ARG A 299 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE D 150 ? N ILE A 150 O SER D 188 ? O SER A 188 AA2 1 2 N THR D 176 ? N THR A 176 O LEU D 194 ? O LEU A 194 AA2 2 3 N VAL D 193 ? N VAL A 193 O ASP D 256 ? O ASP A 256 AA2 3 4 O ILE D 255 ? O ILE A 255 N GLY D 237 ? N GLY A 237 AA2 4 5 O MET D 236 ? O MET A 236 N SER D 229 ? N SER A 229 AA3 1 2 N THR D 201 ? N THR A 201 O SER D 204 ? O SER A 204 AA4 1 2 N THR D 292 ? N THR A 292 O ARG D 299 ? O ARG A 299 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 P _pdbx_validate_rmsd_bond.auth_comp_id_1 DC _pdbx_validate_rmsd_bond.auth_seq_id_1 2 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 P _pdbx_validate_rmsd_bond.auth_asym_id_2 P _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 3 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.517 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.090 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" T DC 5 ? ? "C1'" T DC 5 ? ? N1 T DC 5 ? ? 110.67 108.30 2.37 0.30 N 2 1 "C3'" T DC 6 ? ? "O3'" T DC 6 ? ? P T 8NI 7 ? ? 110.65 119.70 -9.05 1.20 Y 3 1 "O4'" T DG 15 ? ? "C1'" T DG 15 ? ? N9 T DG 15 ? ? 110.68 108.30 2.38 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 11 ? ? 72.04 53.23 2 1 ASP A 170 ? ? -162.60 117.47 3 1 CYS A 178 ? ? -121.45 -155.41 4 1 ASP A 314 ? ? -151.65 22.79 5 1 SER A 334 ? ? -88.37 48.71 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C5 ? T 8NI 7 ? PLANAR . 2 1 "C1'" ? T 8NI 7 ? 'WRONG HAND' . # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 149 ? ? 0.255 'SIDE CHAIN' 2 1 ARG A 258 ? ? 0.142 'SIDE CHAIN' 3 1 ARG A 328 ? ? 0.288 'SIDE CHAIN' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y+1/2,-z # _pdbx_entry_details.entry_id 8VFA _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? D MET 1 2 1 Y 1 A SER 2 ? D SER 2 3 1 Y 1 A LYS 3 ? D LYS 3 4 1 Y 1 A ARG 4 ? D ARG 4 5 1 Y 1 A LYS 5 ? D LYS 5 6 1 Y 1 A ALA 6 ? D ALA 6 7 1 Y 1 A PRO 7 ? D PRO 7 8 1 Y 1 A GLN 8 ? D GLN 8 9 1 Y 1 A GLU 9 ? D GLU 9 10 1 Y 1 A LEU 301 ? D LEU 301 11 1 Y 1 A GLY 302 ? D GLY 302 12 1 Y 1 A VAL 303 ? D VAL 303 13 1 Y 1 A THR 304 ? D THR 304 14 1 Y 1 A GLY 305 ? D GLY 305 15 1 Y 1 A VAL 306 ? D VAL 306 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8NI C5 C N S 1 8NI C4 C N N 2 8NI N2 N N N 3 8NI N7 N N N 4 8NI C8 C N N 5 8NI "C1'" C N R 6 8NI C2 C N N 7 8NI "C2'" C N N 8 8NI "C3'" C N S 9 8NI "C4'" C N R 10 8NI "C5'" C N N 11 8NI C6 C N N 12 8NI N1 N N N 13 8NI N3 N N N 14 8NI N9 N N N 15 8NI "O3'" O N N 16 8NI "O4'" O N N 17 8NI "O5'" O N N 18 8NI O6 O N N 19 8NI O8 O N N 20 8NI OP1 O N N 21 8NI OP2 O N N 22 8NI P P N N 23 8NI H1 H N N 24 8NI H2 H N N 25 8NI H3 H N N 26 8NI H4 H N N 27 8NI H5 H N N 28 8NI H6 H N N 29 8NI H7 H N N 30 8NI H8 H N N 31 8NI H9 H N N 32 8NI H10 H N N 33 8NI H11 H N N 34 8NI H12 H N N 35 8NI H13 H N N 36 8NI H14 H N N 37 8NI H16 H N N 38 8NI OP3 O N N 39 8NI H15 H N N 40 ALA N N N N 41 ALA CA C N S 42 ALA C C N N 43 ALA O O N N 44 ALA CB C N N 45 ALA OXT O N N 46 ALA H H N N 47 ALA H2 H N N 48 ALA HA H N N 49 ALA HB1 H N N 50 ALA HB2 H N N 51 ALA HB3 H N N 52 ALA HXT H N N 53 ARG N N N N 54 ARG CA C N S 55 ARG C C N N 56 ARG O O N N 57 ARG CB C N N 58 ARG CG C N N 59 ARG CD C N N 60 ARG NE N N N 61 ARG CZ C N N 62 ARG NH1 N N N 63 ARG NH2 N N N 64 ARG OXT O N N 65 ARG H H N N 66 ARG H2 H N N 67 ARG HA H N N 68 ARG HB2 H N N 69 ARG HB3 H N N 70 ARG HG2 H N N 71 ARG HG3 H N N 72 ARG HD2 H N N 73 ARG HD3 H N N 74 ARG HE H N N 75 ARG HH11 H N N 76 ARG HH12 H N N 77 ARG HH21 H N N 78 ARG HH22 H N N 79 ARG HXT H N N 80 ASN N N N N 81 ASN CA C N S 82 ASN C C N N 83 ASN O O N N 84 ASN CB C N N 85 ASN CG C N N 86 ASN OD1 O N N 87 ASN ND2 N N N 88 ASN OXT O N N 89 ASN H H N N 90 ASN H2 H N N 91 ASN HA H N N 92 ASN HB2 H N N 93 ASN HB3 H N N 94 ASN HD21 H N N 95 ASN HD22 H N N 96 ASN HXT H N N 97 ASP N N N N 98 ASP CA C N S 99 ASP C C N N 100 ASP O O N N 101 ASP CB C N N 102 ASP CG C N N 103 ASP OD1 O N N 104 ASP OD2 O N N 105 ASP OXT O N N 106 ASP H H N N 107 ASP H2 H N N 108 ASP HA H N N 109 ASP HB2 H N N 110 ASP HB3 H N N 111 ASP HD2 H N N 112 ASP HXT H N N 113 CYS N N N N 114 CYS CA C N R 115 CYS C C N N 116 CYS O O N N 117 CYS CB C N N 118 CYS SG S N N 119 CYS OXT O N N 120 CYS H H N N 121 CYS H2 H N N 122 CYS HA H N N 123 CYS HB2 H N N 124 CYS HB3 H N N 125 CYS HG H N N 126 CYS HXT H N N 127 DA OP3 O N N 128 DA P P N N 129 DA OP1 O N N 130 DA OP2 O N N 131 DA "O5'" O N N 132 DA "C5'" C N N 133 DA "C4'" C N R 134 DA "O4'" O N N 135 DA "C3'" C N S 136 DA "O3'" O N N 137 DA "C2'" C N N 138 DA "C1'" C N R 139 DA N9 N Y N 140 DA C8 C Y N 141 DA N7 N Y N 142 DA C5 C Y N 143 DA C6 C Y N 144 DA N6 N N N 145 DA N1 N Y N 146 DA C2 C Y N 147 DA N3 N Y N 148 DA C4 C Y N 149 DA HOP3 H N N 150 DA HOP2 H N N 151 DA "H5'" H N N 152 DA "H5''" H N N 153 DA "H4'" H N N 154 DA "H3'" H N N 155 DA "HO3'" H N N 156 DA "H2'" H N N 157 DA "H2''" H N N 158 DA "H1'" H N N 159 DA H8 H N N 160 DA H61 H N N 161 DA H62 H N N 162 DA H2 H N N 163 DC OP3 O N N 164 DC P P N N 165 DC OP1 O N N 166 DC OP2 O N N 167 DC "O5'" O N N 168 DC "C5'" C N N 169 DC "C4'" C N R 170 DC "O4'" O N N 171 DC "C3'" C N S 172 DC "O3'" O N N 173 DC "C2'" C N N 174 DC "C1'" C N R 175 DC N1 N N N 176 DC C2 C N N 177 DC O2 O N N 178 DC N3 N N N 179 DC C4 C N N 180 DC N4 N N N 181 DC C5 C N N 182 DC C6 C N N 183 DC HOP3 H N N 184 DC HOP2 H N N 185 DC "H5'" H N N 186 DC "H5''" H N N 187 DC "H4'" H N N 188 DC "H3'" H N N 189 DC "HO3'" H N N 190 DC "H2'" H N N 191 DC "H2''" H N N 192 DC "H1'" H N N 193 DC H41 H N N 194 DC H42 H N N 195 DC H5 H N N 196 DC H6 H N N 197 DG OP3 O N N 198 DG P P N N 199 DG OP1 O N N 200 DG OP2 O N N 201 DG "O5'" O N N 202 DG "C5'" C N N 203 DG "C4'" C N R 204 DG "O4'" O N N 205 DG "C3'" C N S 206 DG "O3'" O N N 207 DG "C2'" C N N 208 DG "C1'" C N R 209 DG N9 N Y N 210 DG C8 C Y N 211 DG N7 N Y N 212 DG C5 C Y N 213 DG C6 C N N 214 DG O6 O N N 215 DG N1 N N N 216 DG C2 C N N 217 DG N2 N N N 218 DG N3 N N N 219 DG C4 C Y N 220 DG HOP3 H N N 221 DG HOP2 H N N 222 DG "H5'" H N N 223 DG "H5''" H N N 224 DG "H4'" H N N 225 DG "H3'" H N N 226 DG "HO3'" H N N 227 DG "H2'" H N N 228 DG "H2''" H N N 229 DG "H1'" H N N 230 DG H8 H N N 231 DG H1 H N N 232 DG H21 H N N 233 DG H22 H N N 234 DT OP3 O N N 235 DT P P N N 236 DT OP1 O N N 237 DT OP2 O N N 238 DT "O5'" O N N 239 DT "C5'" C N N 240 DT "C4'" C N R 241 DT "O4'" O N N 242 DT "C3'" C N S 243 DT "O3'" O N N 244 DT "C2'" C N N 245 DT "C1'" C N R 246 DT N1 N N N 247 DT C2 C N N 248 DT O2 O N N 249 DT N3 N N N 250 DT C4 C N N 251 DT O4 O N N 252 DT C5 C N N 253 DT C7 C N N 254 DT C6 C N N 255 DT HOP3 H N N 256 DT HOP2 H N N 257 DT "H5'" H N N 258 DT "H5''" H N N 259 DT "H4'" H N N 260 DT "H3'" H N N 261 DT "HO3'" H N N 262 DT "H2'" H N N 263 DT "H2''" H N N 264 DT "H1'" H N N 265 DT H3 H N N 266 DT H71 H N N 267 DT H72 H N N 268 DT H73 H N N 269 DT H6 H N N 270 G2P PG P N N 271 G2P O1G O N N 272 G2P O2G O N N 273 G2P O3G O N N 274 G2P O3B O N N 275 G2P PB P N R 276 G2P O1B O N N 277 G2P O2B O N N 278 G2P C3A C N N 279 G2P PA P N S 280 G2P O1A O N N 281 G2P O2A O N N 282 G2P "O5'" O N N 283 G2P "C5'" C N N 284 G2P "C4'" C N R 285 G2P "O4'" O N N 286 G2P "C3'" C N S 287 G2P "O3'" O N N 288 G2P "C2'" C N R 289 G2P "O2'" O N N 290 G2P "C1'" C N R 291 G2P N9 N Y N 292 G2P C8 C Y N 293 G2P N7 N Y N 294 G2P C5 C Y N 295 G2P C6 C Y N 296 G2P O6 O N N 297 G2P N1 N Y N 298 G2P C2 C Y N 299 G2P N2 N N N 300 G2P N3 N Y N 301 G2P C4 C Y N 302 G2P H3A1 H N N 303 G2P H3A2 H N N 304 G2P "H5'1" H N N 305 G2P "H5'2" H N N 306 G2P "H4'" H N N 307 G2P "H3'" H N N 308 G2P HA H N N 309 G2P "H2'" H N N 310 G2P HB H N N 311 G2P "H1'" H N N 312 G2P H8 H N N 313 G2P H1 H N N 314 G2P H2N1 H N N 315 G2P H2N2 H N N 316 G2P HO1 H N N 317 G2P HO2 H N N 318 G2P HO3 H N N 319 G2P HO4 H N N 320 GLN N N N N 321 GLN CA C N S 322 GLN C C N N 323 GLN O O N N 324 GLN CB C N N 325 GLN CG C N N 326 GLN CD C N N 327 GLN OE1 O N N 328 GLN NE2 N N N 329 GLN OXT O N N 330 GLN H H N N 331 GLN H2 H N N 332 GLN HA H N N 333 GLN HB2 H N N 334 GLN HB3 H N N 335 GLN HG2 H N N 336 GLN HG3 H N N 337 GLN HE21 H N N 338 GLN HE22 H N N 339 GLN HXT H N N 340 GLU N N N N 341 GLU CA C N S 342 GLU C C N N 343 GLU O O N N 344 GLU CB C N N 345 GLU CG C N N 346 GLU CD C N N 347 GLU OE1 O N N 348 GLU OE2 O N N 349 GLU OXT O N N 350 GLU H H N N 351 GLU H2 H N N 352 GLU HA H N N 353 GLU HB2 H N N 354 GLU HB3 H N N 355 GLU HG2 H N N 356 GLU HG3 H N N 357 GLU HE2 H N N 358 GLU HXT H N N 359 GLY N N N N 360 GLY CA C N N 361 GLY C C N N 362 GLY O O N N 363 GLY OXT O N N 364 GLY H H N N 365 GLY H2 H N N 366 GLY HA2 H N N 367 GLY HA3 H N N 368 GLY HXT H N N 369 HIS N N N N 370 HIS CA C N S 371 HIS C C N N 372 HIS O O N N 373 HIS CB C N N 374 HIS CG C Y N 375 HIS ND1 N Y N 376 HIS CD2 C Y N 377 HIS CE1 C Y N 378 HIS NE2 N Y N 379 HIS OXT O N N 380 HIS H H N N 381 HIS H2 H N N 382 HIS HA H N N 383 HIS HB2 H N N 384 HIS HB3 H N N 385 HIS HD1 H N N 386 HIS HD2 H N N 387 HIS HE1 H N N 388 HIS HE2 H N N 389 HIS HXT H N N 390 HOH O O N N 391 HOH H1 H N N 392 HOH H2 H N N 393 ILE N N N N 394 ILE CA C N S 395 ILE C C N N 396 ILE O O N N 397 ILE CB C N S 398 ILE CG1 C N N 399 ILE CG2 C N N 400 ILE CD1 C N N 401 ILE OXT O N N 402 ILE H H N N 403 ILE H2 H N N 404 ILE HA H N N 405 ILE HB H N N 406 ILE HG12 H N N 407 ILE HG13 H N N 408 ILE HG21 H N N 409 ILE HG22 H N N 410 ILE HG23 H N N 411 ILE HD11 H N N 412 ILE HD12 H N N 413 ILE HD13 H N N 414 ILE HXT H N N 415 LEU N N N N 416 LEU CA C N S 417 LEU C C N N 418 LEU O O N N 419 LEU CB C N N 420 LEU CG C N N 421 LEU CD1 C N N 422 LEU CD2 C N N 423 LEU OXT O N N 424 LEU H H N N 425 LEU H2 H N N 426 LEU HA H N N 427 LEU HB2 H N N 428 LEU HB3 H N N 429 LEU HG H N N 430 LEU HD11 H N N 431 LEU HD12 H N N 432 LEU HD13 H N N 433 LEU HD21 H N N 434 LEU HD22 H N N 435 LEU HD23 H N N 436 LEU HXT H N N 437 LYS N N N N 438 LYS CA C N S 439 LYS C C N N 440 LYS O O N N 441 LYS CB C N N 442 LYS CG C N N 443 LYS CD C N N 444 LYS CE C N N 445 LYS NZ N N N 446 LYS OXT O N N 447 LYS H H N N 448 LYS H2 H N N 449 LYS HA H N N 450 LYS HB2 H N N 451 LYS HB3 H N N 452 LYS HG2 H N N 453 LYS HG3 H N N 454 LYS HD2 H N N 455 LYS HD3 H N N 456 LYS HE2 H N N 457 LYS HE3 H N N 458 LYS HZ1 H N N 459 LYS HZ2 H N N 460 LYS HZ3 H N N 461 LYS HXT H N N 462 MET N N N N 463 MET CA C N S 464 MET C C N N 465 MET O O N N 466 MET CB C N N 467 MET CG C N N 468 MET SD S N N 469 MET CE C N N 470 MET OXT O N N 471 MET H H N N 472 MET H2 H N N 473 MET HA H N N 474 MET HB2 H N N 475 MET HB3 H N N 476 MET HG2 H N N 477 MET HG3 H N N 478 MET HE1 H N N 479 MET HE2 H N N 480 MET HE3 H N N 481 MET HXT H N N 482 MN MN MN N N 483 NA NA NA N N 484 PHE N N N N 485 PHE CA C N S 486 PHE C C N N 487 PHE O O N N 488 PHE CB C N N 489 PHE CG C Y N 490 PHE CD1 C Y N 491 PHE CD2 C Y N 492 PHE CE1 C Y N 493 PHE CE2 C Y N 494 PHE CZ C Y N 495 PHE OXT O N N 496 PHE H H N N 497 PHE H2 H N N 498 PHE HA H N N 499 PHE HB2 H N N 500 PHE HB3 H N N 501 PHE HD1 H N N 502 PHE HD2 H N N 503 PHE HE1 H N N 504 PHE HE2 H N N 505 PHE HZ H N N 506 PHE HXT H N N 507 PRO N N N N 508 PRO CA C N S 509 PRO C C N N 510 PRO O O N N 511 PRO CB C N N 512 PRO CG C N N 513 PRO CD C N N 514 PRO OXT O N N 515 PRO H H N N 516 PRO HA H N N 517 PRO HB2 H N N 518 PRO HB3 H N N 519 PRO HG2 H N N 520 PRO HG3 H N N 521 PRO HD2 H N N 522 PRO HD3 H N N 523 PRO HXT H N N 524 SER N N N N 525 SER CA C N S 526 SER C C N N 527 SER O O N N 528 SER CB C N N 529 SER OG O N N 530 SER OXT O N N 531 SER H H N N 532 SER H2 H N N 533 SER HA H N N 534 SER HB2 H N N 535 SER HB3 H N N 536 SER HG H N N 537 SER HXT H N N 538 THR N N N N 539 THR CA C N S 540 THR C C N N 541 THR O O N N 542 THR CB C N R 543 THR OG1 O N N 544 THR CG2 C N N 545 THR OXT O N N 546 THR H H N N 547 THR H2 H N N 548 THR HA H N N 549 THR HB H N N 550 THR HG1 H N N 551 THR HG21 H N N 552 THR HG22 H N N 553 THR HG23 H N N 554 THR HXT H N N 555 TRP N N N N 556 TRP CA C N S 557 TRP C C N N 558 TRP O O N N 559 TRP CB C N N 560 TRP CG C Y N 561 TRP CD1 C Y N 562 TRP CD2 C Y N 563 TRP NE1 N Y N 564 TRP CE2 C Y N 565 TRP CE3 C Y N 566 TRP CZ2 C Y N 567 TRP CZ3 C Y N 568 TRP CH2 C Y N 569 TRP OXT O N N 570 TRP H H N N 571 TRP H2 H N N 572 TRP HA H N N 573 TRP HB2 H N N 574 TRP HB3 H N N 575 TRP HD1 H N N 576 TRP HE1 H N N 577 TRP HE3 H N N 578 TRP HZ2 H N N 579 TRP HZ3 H N N 580 TRP HH2 H N N 581 TRP HXT H N N 582 TYR N N N N 583 TYR CA C N S 584 TYR C C N N 585 TYR O O N N 586 TYR CB C N N 587 TYR CG C Y N 588 TYR CD1 C Y N 589 TYR CD2 C Y N 590 TYR CE1 C Y N 591 TYR CE2 C Y N 592 TYR CZ C Y N 593 TYR OH O N N 594 TYR OXT O N N 595 TYR H H N N 596 TYR H2 H N N 597 TYR HA H N N 598 TYR HB2 H N N 599 TYR HB3 H N N 600 TYR HD1 H N N 601 TYR HD2 H N N 602 TYR HE1 H N N 603 TYR HE2 H N N 604 TYR HH H N N 605 TYR HXT H N N 606 VAL N N N N 607 VAL CA C N S 608 VAL C C N N 609 VAL O O N N 610 VAL CB C N N 611 VAL CG1 C N N 612 VAL CG2 C N N 613 VAL OXT O N N 614 VAL H H N N 615 VAL H2 H N N 616 VAL HA H N N 617 VAL HB H N N 618 VAL HG11 H N N 619 VAL HG12 H N N 620 VAL HG13 H N N 621 VAL HG21 H N N 622 VAL HG22 H N N 623 VAL HG23 H N N 624 VAL HXT H N N 625 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8NI "C5'" "C4'" sing N N 1 8NI "C5'" "O5'" sing N N 2 8NI "O3'" "C3'" sing N N 3 8NI "C4'" "C3'" sing N N 4 8NI "C4'" "O4'" sing N N 5 8NI "C3'" "C2'" sing N N 6 8NI "O5'" P sing N N 7 8NI P OP2 sing N N 8 8NI P OP1 doub N N 9 8NI "O4'" "C1'" sing N N 10 8NI O8 C8 doub N N 11 8NI "C2'" "C1'" sing N N 12 8NI "C1'" N9 sing N N 13 8NI C8 N7 sing N N 14 8NI N7 C5 sing N N 15 8NI N9 C4 sing N N 16 8NI C5 C4 sing N N 17 8NI C5 C6 sing N N 18 8NI C4 N3 doub N N 19 8NI O6 C6 doub N N 20 8NI C6 N1 sing N N 21 8NI N3 C2 sing N N 22 8NI N1 C2 doub N N 23 8NI C2 N2 sing N N 24 8NI C5 H1 sing N N 25 8NI N2 H2 sing N N 26 8NI N2 H3 sing N N 27 8NI N7 H4 sing N N 28 8NI C8 H5 sing N N 29 8NI "C1'" H6 sing N N 30 8NI "C2'" H7 sing N N 31 8NI "C2'" H8 sing N N 32 8NI "C3'" H9 sing N N 33 8NI "C4'" H10 sing N N 34 8NI "C5'" H11 sing N N 35 8NI "C5'" H12 sing N N 36 8NI N9 H13 sing N N 37 8NI "O3'" H14 sing N N 38 8NI OP2 H16 sing N N 39 8NI P OP3 sing N N 40 8NI OP3 H15 sing N N 41 ALA N CA sing N N 42 ALA N H sing N N 43 ALA N H2 sing N N 44 ALA CA C sing N N 45 ALA CA CB sing N N 46 ALA CA HA sing N N 47 ALA C O doub N N 48 ALA C OXT sing N N 49 ALA CB HB1 sing N N 50 ALA CB HB2 sing N N 51 ALA CB HB3 sing N N 52 ALA OXT HXT sing N N 53 ARG N CA sing N N 54 ARG N H sing N N 55 ARG N H2 sing N N 56 ARG CA C sing N N 57 ARG CA CB sing N N 58 ARG CA HA sing N N 59 ARG C O doub N N 60 ARG C OXT sing N N 61 ARG CB CG sing N N 62 ARG CB HB2 sing N N 63 ARG CB HB3 sing N N 64 ARG CG CD sing N N 65 ARG CG HG2 sing N N 66 ARG CG HG3 sing N N 67 ARG CD NE sing N N 68 ARG CD HD2 sing N N 69 ARG CD HD3 sing N N 70 ARG NE CZ sing N N 71 ARG NE HE sing N N 72 ARG CZ NH1 sing N N 73 ARG CZ NH2 doub N N 74 ARG NH1 HH11 sing N N 75 ARG NH1 HH12 sing N N 76 ARG NH2 HH21 sing N N 77 ARG NH2 HH22 sing N N 78 ARG OXT HXT sing N N 79 ASN N CA sing N N 80 ASN N H sing N N 81 ASN N H2 sing N N 82 ASN CA C sing N N 83 ASN CA CB sing N N 84 ASN CA HA sing N N 85 ASN C O doub N N 86 ASN C OXT sing N N 87 ASN CB CG sing N N 88 ASN CB HB2 sing N N 89 ASN CB HB3 sing N N 90 ASN CG OD1 doub N N 91 ASN CG ND2 sing N N 92 ASN ND2 HD21 sing N N 93 ASN ND2 HD22 sing N N 94 ASN OXT HXT sing N N 95 ASP N CA sing N N 96 ASP N H sing N N 97 ASP N H2 sing N N 98 ASP CA C sing N N 99 ASP CA CB sing N N 100 ASP CA HA sing N N 101 ASP C O doub N N 102 ASP C OXT sing N N 103 ASP CB CG sing N N 104 ASP CB HB2 sing N N 105 ASP CB HB3 sing N N 106 ASP CG OD1 doub N N 107 ASP CG OD2 sing N N 108 ASP OD2 HD2 sing N N 109 ASP OXT HXT sing N N 110 CYS N CA sing N N 111 CYS N H sing N N 112 CYS N H2 sing N N 113 CYS CA C sing N N 114 CYS CA CB sing N N 115 CYS CA HA sing N N 116 CYS C O doub N N 117 CYS C OXT sing N N 118 CYS CB SG sing N N 119 CYS CB HB2 sing N N 120 CYS CB HB3 sing N N 121 CYS SG HG sing N N 122 CYS OXT HXT sing N N 123 DA OP3 P sing N N 124 DA OP3 HOP3 sing N N 125 DA P OP1 doub N N 126 DA P OP2 sing N N 127 DA P "O5'" sing N N 128 DA OP2 HOP2 sing N N 129 DA "O5'" "C5'" sing N N 130 DA "C5'" "C4'" sing N N 131 DA "C5'" "H5'" sing N N 132 DA "C5'" "H5''" sing N N 133 DA "C4'" "O4'" sing N N 134 DA "C4'" "C3'" sing N N 135 DA "C4'" "H4'" sing N N 136 DA "O4'" "C1'" sing N N 137 DA "C3'" "O3'" sing N N 138 DA "C3'" "C2'" sing N N 139 DA "C3'" "H3'" sing N N 140 DA "O3'" "HO3'" sing N N 141 DA "C2'" "C1'" sing N N 142 DA "C2'" "H2'" sing N N 143 DA "C2'" "H2''" sing N N 144 DA "C1'" N9 sing N N 145 DA "C1'" "H1'" sing N N 146 DA N9 C8 sing Y N 147 DA N9 C4 sing Y N 148 DA C8 N7 doub Y N 149 DA C8 H8 sing N N 150 DA N7 C5 sing Y N 151 DA C5 C6 sing Y N 152 DA C5 C4 doub Y N 153 DA C6 N6 sing N N 154 DA C6 N1 doub Y N 155 DA N6 H61 sing N N 156 DA N6 H62 sing N N 157 DA N1 C2 sing Y N 158 DA C2 N3 doub Y N 159 DA C2 H2 sing N N 160 DA N3 C4 sing Y N 161 DC OP3 P sing N N 162 DC OP3 HOP3 sing N N 163 DC P OP1 doub N N 164 DC P OP2 sing N N 165 DC P "O5'" sing N N 166 DC OP2 HOP2 sing N N 167 DC "O5'" "C5'" sing N N 168 DC "C5'" "C4'" sing N N 169 DC "C5'" "H5'" sing N N 170 DC "C5'" "H5''" sing N N 171 DC "C4'" "O4'" sing N N 172 DC "C4'" "C3'" sing N N 173 DC "C4'" "H4'" sing N N 174 DC "O4'" "C1'" sing N N 175 DC "C3'" "O3'" sing N N 176 DC "C3'" "C2'" sing N N 177 DC "C3'" "H3'" sing N N 178 DC "O3'" "HO3'" sing N N 179 DC "C2'" "C1'" sing N N 180 DC "C2'" "H2'" sing N N 181 DC "C2'" "H2''" sing N N 182 DC "C1'" N1 sing N N 183 DC "C1'" "H1'" sing N N 184 DC N1 C2 sing N N 185 DC N1 C6 sing N N 186 DC C2 O2 doub N N 187 DC C2 N3 sing N N 188 DC N3 C4 doub N N 189 DC C4 N4 sing N N 190 DC C4 C5 sing N N 191 DC N4 H41 sing N N 192 DC N4 H42 sing N N 193 DC C5 C6 doub N N 194 DC C5 H5 sing N N 195 DC C6 H6 sing N N 196 DG OP3 P sing N N 197 DG OP3 HOP3 sing N N 198 DG P OP1 doub N N 199 DG P OP2 sing N N 200 DG P "O5'" sing N N 201 DG OP2 HOP2 sing N N 202 DG "O5'" "C5'" sing N N 203 DG "C5'" "C4'" sing N N 204 DG "C5'" "H5'" sing N N 205 DG "C5'" "H5''" sing N N 206 DG "C4'" "O4'" sing N N 207 DG "C4'" "C3'" sing N N 208 DG "C4'" "H4'" sing N N 209 DG "O4'" "C1'" sing N N 210 DG "C3'" "O3'" sing N N 211 DG "C3'" "C2'" sing N N 212 DG "C3'" "H3'" sing N N 213 DG "O3'" "HO3'" sing N N 214 DG "C2'" "C1'" sing N N 215 DG "C2'" "H2'" sing N N 216 DG "C2'" "H2''" sing N N 217 DG "C1'" N9 sing N N 218 DG "C1'" "H1'" sing N N 219 DG N9 C8 sing Y N 220 DG N9 C4 sing Y N 221 DG C8 N7 doub Y N 222 DG C8 H8 sing N N 223 DG N7 C5 sing Y N 224 DG C5 C6 sing N N 225 DG C5 C4 doub Y N 226 DG C6 O6 doub N N 227 DG C6 N1 sing N N 228 DG N1 C2 sing N N 229 DG N1 H1 sing N N 230 DG C2 N2 sing N N 231 DG C2 N3 doub N N 232 DG N2 H21 sing N N 233 DG N2 H22 sing N N 234 DG N3 C4 sing N N 235 DT OP3 P sing N N 236 DT OP3 HOP3 sing N N 237 DT P OP1 doub N N 238 DT P OP2 sing N N 239 DT P "O5'" sing N N 240 DT OP2 HOP2 sing N N 241 DT "O5'" "C5'" sing N N 242 DT "C5'" "C4'" sing N N 243 DT "C5'" "H5'" sing N N 244 DT "C5'" "H5''" sing N N 245 DT "C4'" "O4'" sing N N 246 DT "C4'" "C3'" sing N N 247 DT "C4'" "H4'" sing N N 248 DT "O4'" "C1'" sing N N 249 DT "C3'" "O3'" sing N N 250 DT "C3'" "C2'" sing N N 251 DT "C3'" "H3'" sing N N 252 DT "O3'" "HO3'" sing N N 253 DT "C2'" "C1'" sing N N 254 DT "C2'" "H2'" sing N N 255 DT "C2'" "H2''" sing N N 256 DT "C1'" N1 sing N N 257 DT "C1'" "H1'" sing N N 258 DT N1 C2 sing N N 259 DT N1 C6 sing N N 260 DT C2 O2 doub N N 261 DT C2 N3 sing N N 262 DT N3 C4 sing N N 263 DT N3 H3 sing N N 264 DT C4 O4 doub N N 265 DT C4 C5 sing N N 266 DT C5 C7 sing N N 267 DT C5 C6 doub N N 268 DT C7 H71 sing N N 269 DT C7 H72 sing N N 270 DT C7 H73 sing N N 271 DT C6 H6 sing N N 272 G2P PG O1G sing N N 273 G2P PG O2G doub N N 274 G2P PG O3G sing N N 275 G2P PG O3B sing N N 276 G2P O3B PB sing N N 277 G2P PB O1B sing N N 278 G2P PB O2B doub N N 279 G2P PB C3A sing N N 280 G2P C3A PA sing N N 281 G2P C3A H3A1 sing N N 282 G2P C3A H3A2 sing N N 283 G2P PA O1A sing N N 284 G2P PA O2A doub N N 285 G2P PA "O5'" sing N N 286 G2P "O5'" "C5'" sing N N 287 G2P "C5'" "C4'" sing N N 288 G2P "C5'" "H5'1" sing N N 289 G2P "C5'" "H5'2" sing N N 290 G2P "C4'" "O4'" sing N N 291 G2P "C4'" "C3'" sing N N 292 G2P "C4'" "H4'" sing N N 293 G2P "O4'" "C1'" sing N N 294 G2P "C3'" "O3'" sing N N 295 G2P "C3'" "C2'" sing N N 296 G2P "C3'" "H3'" sing N N 297 G2P "O3'" HA sing N N 298 G2P "C2'" "O2'" sing N N 299 G2P "C2'" "C1'" sing N N 300 G2P "C2'" "H2'" sing N N 301 G2P "O2'" HB sing N N 302 G2P "C1'" N9 sing N N 303 G2P "C1'" "H1'" sing N N 304 G2P N9 C8 sing Y N 305 G2P N9 C4 sing Y N 306 G2P C8 N7 doub Y N 307 G2P C8 H8 sing N N 308 G2P N7 C5 sing Y N 309 G2P C5 C6 sing Y N 310 G2P C5 C4 doub Y N 311 G2P C6 O6 doub N N 312 G2P C6 N1 sing Y N 313 G2P N1 C2 sing Y N 314 G2P N1 H1 sing N N 315 G2P C2 N2 sing N N 316 G2P C2 N3 doub Y N 317 G2P N2 H2N1 sing N N 318 G2P N2 H2N2 sing N N 319 G2P N3 C4 sing Y N 320 G2P HO1 O1G sing N N 321 G2P HO2 O3G sing N N 322 G2P HO3 O1A sing N N 323 G2P HO4 O1B sing N N 324 GLN N CA sing N N 325 GLN N H sing N N 326 GLN N H2 sing N N 327 GLN CA C sing N N 328 GLN CA CB sing N N 329 GLN CA HA sing N N 330 GLN C O doub N N 331 GLN C OXT sing N N 332 GLN CB CG sing N N 333 GLN CB HB2 sing N N 334 GLN CB HB3 sing N N 335 GLN CG CD sing N N 336 GLN CG HG2 sing N N 337 GLN CG HG3 sing N N 338 GLN CD OE1 doub N N 339 GLN CD NE2 sing N N 340 GLN NE2 HE21 sing N N 341 GLN NE2 HE22 sing N N 342 GLN OXT HXT sing N N 343 GLU N CA sing N N 344 GLU N H sing N N 345 GLU N H2 sing N N 346 GLU CA C sing N N 347 GLU CA CB sing N N 348 GLU CA HA sing N N 349 GLU C O doub N N 350 GLU C OXT sing N N 351 GLU CB CG sing N N 352 GLU CB HB2 sing N N 353 GLU CB HB3 sing N N 354 GLU CG CD sing N N 355 GLU CG HG2 sing N N 356 GLU CG HG3 sing N N 357 GLU CD OE1 doub N N 358 GLU CD OE2 sing N N 359 GLU OE2 HE2 sing N N 360 GLU OXT HXT sing N N 361 GLY N CA sing N N 362 GLY N H sing N N 363 GLY N H2 sing N N 364 GLY CA C sing N N 365 GLY CA HA2 sing N N 366 GLY CA HA3 sing N N 367 GLY C O doub N N 368 GLY C OXT sing N N 369 GLY OXT HXT sing N N 370 HIS N CA sing N N 371 HIS N H sing N N 372 HIS N H2 sing N N 373 HIS CA C sing N N 374 HIS CA CB sing N N 375 HIS CA HA sing N N 376 HIS C O doub N N 377 HIS C OXT sing N N 378 HIS CB CG sing N N 379 HIS CB HB2 sing N N 380 HIS CB HB3 sing N N 381 HIS CG ND1 sing Y N 382 HIS CG CD2 doub Y N 383 HIS ND1 CE1 doub Y N 384 HIS ND1 HD1 sing N N 385 HIS CD2 NE2 sing Y N 386 HIS CD2 HD2 sing N N 387 HIS CE1 NE2 sing Y N 388 HIS CE1 HE1 sing N N 389 HIS NE2 HE2 sing N N 390 HIS OXT HXT sing N N 391 HOH O H1 sing N N 392 HOH O H2 sing N N 393 ILE N CA sing N N 394 ILE N H sing N N 395 ILE N H2 sing N N 396 ILE CA C sing N N 397 ILE CA CB sing N N 398 ILE CA HA sing N N 399 ILE C O doub N N 400 ILE C OXT sing N N 401 ILE CB CG1 sing N N 402 ILE CB CG2 sing N N 403 ILE CB HB sing N N 404 ILE CG1 CD1 sing N N 405 ILE CG1 HG12 sing N N 406 ILE CG1 HG13 sing N N 407 ILE CG2 HG21 sing N N 408 ILE CG2 HG22 sing N N 409 ILE CG2 HG23 sing N N 410 ILE CD1 HD11 sing N N 411 ILE CD1 HD12 sing N N 412 ILE CD1 HD13 sing N N 413 ILE OXT HXT sing N N 414 LEU N CA sing N N 415 LEU N H sing N N 416 LEU N H2 sing N N 417 LEU CA C sing N N 418 LEU CA CB sing N N 419 LEU CA HA sing N N 420 LEU C O doub N N 421 LEU C OXT sing N N 422 LEU CB CG sing N N 423 LEU CB HB2 sing N N 424 LEU CB HB3 sing N N 425 LEU CG CD1 sing N N 426 LEU CG CD2 sing N N 427 LEU CG HG sing N N 428 LEU CD1 HD11 sing N N 429 LEU CD1 HD12 sing N N 430 LEU CD1 HD13 sing N N 431 LEU CD2 HD21 sing N N 432 LEU CD2 HD22 sing N N 433 LEU CD2 HD23 sing N N 434 LEU OXT HXT sing N N 435 LYS N CA sing N N 436 LYS N H sing N N 437 LYS N H2 sing N N 438 LYS CA C sing N N 439 LYS CA CB sing N N 440 LYS CA HA sing N N 441 LYS C O doub N N 442 LYS C OXT sing N N 443 LYS CB CG sing N N 444 LYS CB HB2 sing N N 445 LYS CB HB3 sing N N 446 LYS CG CD sing N N 447 LYS CG HG2 sing N N 448 LYS CG HG3 sing N N 449 LYS CD CE sing N N 450 LYS CD HD2 sing N N 451 LYS CD HD3 sing N N 452 LYS CE NZ sing N N 453 LYS CE HE2 sing N N 454 LYS CE HE3 sing N N 455 LYS NZ HZ1 sing N N 456 LYS NZ HZ2 sing N N 457 LYS NZ HZ3 sing N N 458 LYS OXT HXT sing N N 459 MET N CA sing N N 460 MET N H sing N N 461 MET N H2 sing N N 462 MET CA C sing N N 463 MET CA CB sing N N 464 MET CA HA sing N N 465 MET C O doub N N 466 MET C OXT sing N N 467 MET CB CG sing N N 468 MET CB HB2 sing N N 469 MET CB HB3 sing N N 470 MET CG SD sing N N 471 MET CG HG2 sing N N 472 MET CG HG3 sing N N 473 MET SD CE sing N N 474 MET CE HE1 sing N N 475 MET CE HE2 sing N N 476 MET CE HE3 sing N N 477 MET OXT HXT sing N N 478 PHE N CA sing N N 479 PHE N H sing N N 480 PHE N H2 sing N N 481 PHE CA C sing N N 482 PHE CA CB sing N N 483 PHE CA HA sing N N 484 PHE C O doub N N 485 PHE C OXT sing N N 486 PHE CB CG sing N N 487 PHE CB HB2 sing N N 488 PHE CB HB3 sing N N 489 PHE CG CD1 doub Y N 490 PHE CG CD2 sing Y N 491 PHE CD1 CE1 sing Y N 492 PHE CD1 HD1 sing N N 493 PHE CD2 CE2 doub Y N 494 PHE CD2 HD2 sing N N 495 PHE CE1 CZ doub Y N 496 PHE CE1 HE1 sing N N 497 PHE CE2 CZ sing Y N 498 PHE CE2 HE2 sing N N 499 PHE CZ HZ sing N N 500 PHE OXT HXT sing N N 501 PRO N CA sing N N 502 PRO N CD sing N N 503 PRO N H sing N N 504 PRO CA C sing N N 505 PRO CA CB sing N N 506 PRO CA HA sing N N 507 PRO C O doub N N 508 PRO C OXT sing N N 509 PRO CB CG sing N N 510 PRO CB HB2 sing N N 511 PRO CB HB3 sing N N 512 PRO CG CD sing N N 513 PRO CG HG2 sing N N 514 PRO CG HG3 sing N N 515 PRO CD HD2 sing N N 516 PRO CD HD3 sing N N 517 PRO OXT HXT sing N N 518 SER N CA sing N N 519 SER N H sing N N 520 SER N H2 sing N N 521 SER CA C sing N N 522 SER CA CB sing N N 523 SER CA HA sing N N 524 SER C O doub N N 525 SER C OXT sing N N 526 SER CB OG sing N N 527 SER CB HB2 sing N N 528 SER CB HB3 sing N N 529 SER OG HG sing N N 530 SER OXT HXT sing N N 531 THR N CA sing N N 532 THR N H sing N N 533 THR N H2 sing N N 534 THR CA C sing N N 535 THR CA CB sing N N 536 THR CA HA sing N N 537 THR C O doub N N 538 THR C OXT sing N N 539 THR CB OG1 sing N N 540 THR CB CG2 sing N N 541 THR CB HB sing N N 542 THR OG1 HG1 sing N N 543 THR CG2 HG21 sing N N 544 THR CG2 HG22 sing N N 545 THR CG2 HG23 sing N N 546 THR OXT HXT sing N N 547 TRP N CA sing N N 548 TRP N H sing N N 549 TRP N H2 sing N N 550 TRP CA C sing N N 551 TRP CA CB sing N N 552 TRP CA HA sing N N 553 TRP C O doub N N 554 TRP C OXT sing N N 555 TRP CB CG sing N N 556 TRP CB HB2 sing N N 557 TRP CB HB3 sing N N 558 TRP CG CD1 doub Y N 559 TRP CG CD2 sing Y N 560 TRP CD1 NE1 sing Y N 561 TRP CD1 HD1 sing N N 562 TRP CD2 CE2 doub Y N 563 TRP CD2 CE3 sing Y N 564 TRP NE1 CE2 sing Y N 565 TRP NE1 HE1 sing N N 566 TRP CE2 CZ2 sing Y N 567 TRP CE3 CZ3 doub Y N 568 TRP CE3 HE3 sing N N 569 TRP CZ2 CH2 doub Y N 570 TRP CZ2 HZ2 sing N N 571 TRP CZ3 CH2 sing Y N 572 TRP CZ3 HZ3 sing N N 573 TRP CH2 HH2 sing N N 574 TRP OXT HXT sing N N 575 TYR N CA sing N N 576 TYR N H sing N N 577 TYR N H2 sing N N 578 TYR CA C sing N N 579 TYR CA CB sing N N 580 TYR CA HA sing N N 581 TYR C O doub N N 582 TYR C OXT sing N N 583 TYR CB CG sing N N 584 TYR CB HB2 sing N N 585 TYR CB HB3 sing N N 586 TYR CG CD1 doub Y N 587 TYR CG CD2 sing Y N 588 TYR CD1 CE1 sing Y N 589 TYR CD1 HD1 sing N N 590 TYR CD2 CE2 doub Y N 591 TYR CD2 HD2 sing N N 592 TYR CE1 CZ doub Y N 593 TYR CE1 HE1 sing N N 594 TYR CE2 CZ sing Y N 595 TYR CE2 HE2 sing N N 596 TYR CZ OH sing N N 597 TYR OH HH sing N N 598 TYR OXT HXT sing N N 599 VAL N CA sing N N 600 VAL N H sing N N 601 VAL N H2 sing N N 602 VAL CA C sing N N 603 VAL CA CB sing N N 604 VAL CA HA sing N N 605 VAL C O doub N N 606 VAL C OXT sing N N 607 VAL CB CG1 sing N N 608 VAL CB CG2 sing N N 609 VAL CB HB sing N N 610 VAL CG1 HG11 sing N N 611 VAL CG1 HG12 sing N N 612 VAL CG1 HG13 sing N N 613 VAL CG2 HG21 sing N N 614 VAL CG2 HG22 sing N N 615 VAL CG2 HG23 sing N N 616 VAL OXT HXT sing N N 617 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8VFA 'double helix' 8VFA 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 C DG 5 1_555 -0.022 -0.225 0.316 -3.079 -8.026 -1.283 1 T_DC1:DG5_D T 1 ? D 5 ? 19 1 1 A DC 2 1_555 C DG 4 1_555 0.372 -0.424 -0.084 -1.712 -4.053 -0.986 2 T_DC2:DG4_D T 2 ? D 4 ? 19 1 1 A DG 3 1_555 C DC 3 1_555 -0.231 -0.312 0.142 2.622 -7.066 -2.947 3 T_DG3:DC3_D T 3 ? D 3 ? 19 1 1 A DA 4 1_555 C DT 2 1_555 0.136 -0.189 0.299 1.191 -1.721 -1.350 4 T_DA4:DT2_D T 4 ? D 2 ? 20 1 1 A DC 5 1_555 C DG 1 1_555 0.125 -0.026 -0.309 18.707 4.737 -3.043 5 T_DC5:DG1_D T 5 ? D 1 ? 19 1 1 A DC 8 1_555 B DG 9 1_555 0.076 -0.246 0.145 -8.957 4.702 -1.620 6 T_DC8:DG9_P T 8 ? P 9 ? 19 1 1 A DG 9 1_555 B DC 8 1_555 -0.198 -0.217 -0.118 1.769 -0.609 -1.880 7 T_DG9:DC8_P T 9 ? P 8 ? 19 1 1 A DC 10 1_555 B DG 7 1_555 0.365 -0.253 0.294 2.959 -8.088 -1.704 8 T_DC10:DG7_P T 10 ? P 7 ? 19 1 1 A DA 11 1_555 B DT 6 1_555 -0.038 -0.103 0.380 1.998 -9.885 1.162 9 T_DA11:DT6_P T 11 ? P 6 ? 20 1 1 A DT 12 1_555 B DA 5 1_555 -0.148 -0.236 0.157 5.617 -9.063 2.591 10 T_DT12:DA5_P T 12 ? P 5 ? 20 1 1 A DC 13 1_555 B DG 4 1_555 0.410 -0.312 0.137 0.858 -12.075 0.888 11 T_DC13:DG4_P T 13 ? P 4 ? 19 1 1 A DA 14 1_555 B DT 3 1_555 0.370 -0.264 0.577 7.483 1.860 -5.606 12 T_DA14:DT3_P T 14 ? P 3 ? 20 1 1 A DG 15 1_555 B DC 2 1_555 -0.223 -0.245 0.225 11.948 -5.762 -0.971 13 T_DG15:DC2_P T 15 ? P 2 ? 19 1 1 A DC 16 1_555 B DG 1 1_555 0.389 -0.245 0.121 6.907 -10.660 -2.684 14 T_DC16:DG1_P T 16 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 C DG 5 1_555 A DC 2 1_555 C DG 4 1_555 1.110 0.357 3.162 5.478 2.208 38.600 0.270 -1.005 3.297 3.317 -8.228 39.032 1 TT_DC1DC2:DG4DG5_DD T 1 ? D 5 ? T 2 ? D 4 ? 1 A DC 2 1_555 C DG 4 1_555 A DG 3 1_555 C DC 3 1_555 -0.864 0.587 3.305 -4.096 4.248 32.941 0.293 0.799 3.432 7.417 7.151 33.451 2 TT_DC2DG3:DC3DG4_DD T 2 ? D 4 ? T 3 ? D 3 ? 1 A DG 3 1_555 C DC 3 1_555 A DA 4 1_555 C DT 2 1_555 -0.247 -0.236 3.264 -2.456 -0.110 37.217 -0.354 0.061 3.274 -0.172 3.843 37.295 3 TT_DG3DA4:DT2DC3_DD T 3 ? D 3 ? T 4 ? D 2 ? 1 A DA 4 1_555 C DT 2 1_555 A DC 5 1_555 C DG 1 1_555 0.565 -0.281 3.017 3.505 -1.235 27.964 -0.306 -0.396 3.073 -2.542 -7.214 28.205 4 TT_DA4DC5:DG1DT2_DD T 4 ? D 2 ? T 5 ? D 1 ? 1 A DC 8 1_555 B DG 9 1_555 A DG 9 1_555 B DC 8 1_555 -1.307 -0.003 3.298 -0.643 1.145 33.515 -0.196 2.158 3.320 1.985 1.115 33.540 5 TT_DC8DG9:DC8DG9_PP T 8 ? P 9 ? T 9 ? P 8 ? 1 A DG 9 1_555 B DC 8 1_555 A DC 10 1_555 B DG 7 1_555 -0.327 -0.462 3.342 -3.190 2.837 31.378 -1.381 -0.002 3.305 5.215 5.864 31.660 6 TT_DG9DC10:DG7DC8_PP T 9 ? P 8 ? T 10 ? P 7 ? 1 A DC 10 1_555 B DG 7 1_555 A DA 11 1_555 B DT 6 1_555 -0.029 -0.152 3.264 0.067 1.165 39.255 -0.365 0.051 3.259 1.734 -0.100 39.272 7 TT_DC10DA11:DT6DG7_PP T 10 ? P 7 ? T 11 ? P 6 ? 1 A DA 11 1_555 B DT 6 1_555 A DT 12 1_555 B DA 5 1_555 0.398 -0.676 3.218 2.108 -4.019 29.898 -0.480 -0.335 3.298 -7.734 -4.056 30.233 8 TT_DA11DT12:DA5DT6_PP T 11 ? P 6 ? T 12 ? P 5 ? 1 A DT 12 1_555 B DA 5 1_555 A DC 13 1_555 B DG 4 1_555 0.095 -0.355 3.201 0.924 -1.088 42.920 -0.379 -0.040 3.210 -1.487 -1.262 42.943 9 TT_DT12DC13:DG4DA5_PP T 12 ? P 5 ? T 13 ? P 4 ? 1 A DC 13 1_555 B DG 4 1_555 A DA 14 1_555 B DT 3 1_555 -0.487 -0.488 3.053 -3.177 0.577 35.698 -0.871 0.364 3.076 0.939 5.170 35.839 10 TT_DC13DA14:DT3DG4_PP T 13 ? P 4 ? T 14 ? P 3 ? 1 A DA 14 1_555 B DT 3 1_555 A DG 15 1_555 B DC 2 1_555 0.841 -0.932 3.222 1.030 5.706 26.483 -3.375 -1.544 2.988 12.268 -2.214 27.100 11 TT_DA14DG15:DC2DT3_PP T 14 ? P 3 ? T 15 ? P 2 ? 1 A DG 15 1_555 B DC 2 1_555 A DC 16 1_555 B DG 1 1_555 -0.753 -0.798 3.336 -1.773 2.527 38.970 -1.502 0.909 3.310 3.781 2.653 39.087 12 TT_DG15DC16:DG1DC2_PP T 15 ? P 2 ? T 16 ? P 1 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01ES-027558 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 8NI ? ? 8NI ? ? 'SUBJECT OF INVESTIGATION' ? 2 G2P ? ? G2P ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2FMS _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 1 21 1' _space_group.name_Hall 'P 2yb' _space_group.IT_number 4 _space_group.crystal_system monoclinic _space_group.id 1 # _atom_sites.entry_id 8VFA _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.018370 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006061 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012574 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019185 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MN ? ? 20.23591 4.67902 ? ? 2.76514 44.01191 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA ? ? 9.38062 1.54875 ? ? 3.38349 72.32734 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O1- ? ? 5.12366 3.84317 ? ? 3.49406 27.47979 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_