HEADER IMMUNE SYSTEM 27-DEC-23 8VGG TITLE CRYSTAL STRUCTURE OF AN ENGINEERED CONFORMATIONALLY RIGID ANTI- TITLE 2 TRYPTASE FAB VARIANT E104.V1.6DS COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB E104.V1.6DS LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB E104.V1.6DS HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS ANTIBODY FRAGMENT, FAB, PROTEIN ENGINEERING, TRYPTASE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.E.KUNG,J.SUDHAMSU REVDAT 1 30-OCT-24 8VGG 0 JRNL AUTH J.E.KUNG,M.C.JOHNSON,C.C.JAO,C.P.ARTHUR,D.TEGUNOV,A.ROHOU, JRNL AUTH 2 J.SUDHAMSU JRNL TITL DISULFI DE CONSTRAINED FABS OVERCOME TARGET SIZE LIMITATION JRNL TITL 2 FOR HIGH-RESOLUTION SINGLE-PARTICLE CRYO-EM. JRNL REF BIORXIV 2024 JRNL REFN ISSN 2692-8205 JRNL PMID 38798381 JRNL DOI 10.1101/2024.05.10.593593 REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20RC3-4406_FINAL REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15104 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1510 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.4200 - 6.0200 1.00 1364 151 0.2124 0.2652 REMARK 3 2 6.0200 - 4.7800 1.00 1270 141 0.1845 0.2271 REMARK 3 3 4.7800 - 4.1800 1.00 1244 138 0.1588 0.1977 REMARK 3 4 4.1800 - 3.8000 1.00 1233 138 0.1908 0.2572 REMARK 3 5 3.8000 - 3.5200 1.00 1225 136 0.2160 0.2536 REMARK 3 6 3.5200 - 3.3200 1.00 1223 135 0.2191 0.2574 REMARK 3 7 3.3200 - 3.1500 1.00 1215 136 0.2264 0.2867 REMARK 3 8 3.1500 - 3.0100 1.00 1212 134 0.2355 0.3009 REMARK 3 9 3.0100 - 2.9000 1.00 1202 133 0.2630 0.3430 REMARK 3 10 2.9000 - 2.8000 1.00 1213 135 0.2653 0.3239 REMARK 3 11 2.8000 - 2.7100 1.00 1193 133 0.2443 0.3216 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.307 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.116 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3227 REMARK 3 ANGLE : 0.574 4387 REMARK 3 CHIRALITY : 0.043 511 REMARK 3 PLANARITY : 0.004 552 REMARK 3 DIHEDRAL : 13.273 1149 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN L AND RESID 3:24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.489 -60.918 10.966 REMARK 3 T TENSOR REMARK 3 T11: 0.2677 T22: 0.2716 REMARK 3 T33: 0.4238 T12: 0.0723 REMARK 3 T13: 0.0046 T23: -0.0224 REMARK 3 L TENSOR REMARK 3 L11: 6.6897 L22: 5.6122 REMARK 3 L33: 9.8055 L12: 0.0532 REMARK 3 L13: -1.2149 L23: 0.0070 REMARK 3 S TENSOR REMARK 3 S11: -0.0842 S12: 0.1738 S13: -0.7097 REMARK 3 S21: 0.0215 S22: 0.0194 S23: 0.3408 REMARK 3 S31: 0.1753 S32: -0.2036 S33: 0.1511 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN L AND RESID 25:38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.595 -54.368 14.700 REMARK 3 T TENSOR REMARK 3 T11: 0.4087 T22: 0.4451 REMARK 3 T33: 0.6854 T12: 0.0387 REMARK 3 T13: 0.0962 T23: -0.1083 REMARK 3 L TENSOR REMARK 3 L11: 2.8756 L22: 4.3123 REMARK 3 L33: 5.3687 L12: 0.2354 REMARK 3 L13: -1.0815 L23: -2.7066 REMARK 3 S TENSOR REMARK 3 S11: -0.0690 S12: 0.0573 S13: -0.2725 REMARK 3 S21: 0.7152 S22: 0.3071 S23: 0.9464 REMARK 3 S31: -0.0540 S32: -0.8729 S33: -0.1670 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN L AND RESID 39:75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.146 -55.252 5.209 REMARK 3 T TENSOR REMARK 3 T11: 0.3431 T22: 0.4328 REMARK 3 T33: 0.6872 T12: 0.0091 REMARK 3 T13: -0.0397 T23: -0.1188 REMARK 3 L TENSOR REMARK 3 L11: 2.2186 L22: 4.9214 REMARK 3 L33: 4.2227 L12: -1.0181 REMARK 3 L13: -0.0299 L23: -0.1206 REMARK 3 S TENSOR REMARK 3 S11: 0.1293 S12: 0.0119 S13: -0.7171 REMARK 3 S21: -0.3407 S22: 0.0117 S23: 0.5537 REMARK 3 S31: 0.3315 S32: -0.5938 S33: -0.0704 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN L AND RESID 76:91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.183 -54.755 4.889 REMARK 3 T TENSOR REMARK 3 T11: 0.3309 T22: 0.3794 REMARK 3 T33: 0.4299 T12: 0.0463 REMARK 3 T13: -0.0536 T23: -0.0571 REMARK 3 L TENSOR REMARK 3 L11: 7.7244 L22: 4.1497 REMARK 3 L33: 7.0147 L12: 0.5689 REMARK 3 L13: -3.3204 L23: -0.2468 REMARK 3 S TENSOR REMARK 3 S11: 0.1727 S12: 0.5090 S13: 0.4225 REMARK 3 S21: -0.1976 S22: 0.1675 S23: 0.1885 REMARK 3 S31: -0.3456 S32: -0.1996 S33: -0.3667 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN L AND RESID 92:139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.771 -43.128 5.708 REMARK 3 T TENSOR REMARK 3 T11: 0.5058 T22: 0.4453 REMARK 3 T33: 0.4586 T12: 0.0265 REMARK 3 T13: 0.0507 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 3.8419 L22: 3.3059 REMARK 3 L33: 2.0889 L12: 1.0776 REMARK 3 L13: -1.5923 L23: 0.4086 REMARK 3 S TENSOR REMARK 3 S11: 0.0056 S12: 0.4615 S13: 0.2812 REMARK 3 S21: -0.1918 S22: 0.2656 S23: -0.3763 REMARK 3 S31: -0.4171 S32: -0.0265 S33: -0.3148 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN L AND RESID 140:152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.168 -48.543 3.431 REMARK 3 T TENSOR REMARK 3 T11: 0.5437 T22: 0.5881 REMARK 3 T33: 0.7884 T12: -0.0292 REMARK 3 T13: 0.2062 T23: -0.2453 REMARK 3 L TENSOR REMARK 3 L11: 8.3973 L22: 6.7393 REMARK 3 L33: 3.4851 L12: 5.5751 REMARK 3 L13: 2.1318 L23: 0.9517 REMARK 3 S TENSOR REMARK 3 S11: 0.1586 S12: -0.3629 S13: 0.6209 REMARK 3 S21: 0.2866 S22: 0.2020 S23: -1.0888 REMARK 3 S31: 0.4206 S32: -0.2463 S33: -0.3772 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN L AND RESID 153:176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.452 -44.971 3.630 REMARK 3 T TENSOR REMARK 3 T11: 0.4680 T22: 0.5490 REMARK 3 T33: 0.6977 T12: 0.0610 REMARK 3 T13: 0.1265 T23: -0.2045 REMARK 3 L TENSOR REMARK 3 L11: 6.2680 L22: 2.9770 REMARK 3 L33: 1.3765 L12: 2.4915 REMARK 3 L13: 1.6963 L23: 0.6615 REMARK 3 S TENSOR REMARK 3 S11: -0.1126 S12: -0.1950 S13: 0.1912 REMARK 3 S21: -0.1964 S22: 0.2948 S23: -0.4736 REMARK 3 S31: 0.1592 S32: 0.2554 S33: -0.0375 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN L AND RESID 177:212 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.783 -38.836 1.150 REMARK 3 T TENSOR REMARK 3 T11: 0.6400 T22: 0.8428 REMARK 3 T33: 1.1016 T12: -0.0972 REMARK 3 T13: 0.3241 T23: -0.2187 REMARK 3 L TENSOR REMARK 3 L11: 0.8081 L22: 3.5704 REMARK 3 L33: 1.0852 L12: 0.4191 REMARK 3 L13: 0.8981 L23: 1.0837 REMARK 3 S TENSOR REMARK 3 S11: -0.0744 S12: 0.4690 S13: -0.0592 REMARK 3 S21: -0.6033 S22: 0.4506 S23: -1.7818 REMARK 3 S31: -0.5673 S32: -0.0594 S33: -0.2606 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN H AND RESID 3:150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.294 -34.011 13.296 REMARK 3 T TENSOR REMARK 3 T11: 0.3643 T22: 0.3176 REMARK 3 T33: 0.3038 T12: 0.0628 REMARK 3 T13: -0.0384 T23: -0.0548 REMARK 3 L TENSOR REMARK 3 L11: 4.7446 L22: 2.1854 REMARK 3 L33: 1.2346 L12: -0.5994 REMARK 3 L13: -1.6852 L23: 0.1242 REMARK 3 S TENSOR REMARK 3 S11: 0.0939 S12: 0.0880 S13: -0.2774 REMARK 3 S21: -0.2316 S22: -0.1476 S23: -0.0742 REMARK 3 S31: -0.2074 S32: -0.0164 S33: 0.0285 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN H AND RESID 151:216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.252 -31.162 0.909 REMARK 3 T TENSOR REMARK 3 T11: 0.7385 T22: 0.7401 REMARK 3 T33: 0.5174 T12: 0.0680 REMARK 3 T13: 0.0157 T23: 0.0621 REMARK 3 L TENSOR REMARK 3 L11: 4.6558 L22: 7.0438 REMARK 3 L33: 2.6725 L12: -0.5111 REMARK 3 L13: -1.7591 L23: 2.3941 REMARK 3 S TENSOR REMARK 3 S11: 0.2641 S12: 1.2295 S13: 0.2186 REMARK 3 S21: -1.0194 S22: -0.4487 S23: 0.3065 REMARK 3 S31: -0.3375 S32: -0.5190 S33: 0.2460 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8VGG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1000280099. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979460 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15107 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.710 REMARK 200 RESOLUTION RANGE LOW (A) : 36.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 19.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.23330 REMARK 200 FOR THE DATA SET : 15.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 19.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.69300 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE, PH 4.5, 26% REMARK 280 PEG4000, VAPOR DIFFUSION, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.34633 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 90.69267 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 68.01950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 113.36583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 22.67317 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 45.34633 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 90.69267 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 113.36583 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 68.01950 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 22.67317 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP L 1 REMARK 465 ILE L 2 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 465 GLU H 1 REMARK 465 PRO H 130 REMARK 465 SER H 131 REMARK 465 SER H 132 REMARK 465 LYS H 133 REMARK 465 SER H 134 REMARK 465 THR H 135 REMARK 465 SER H 136 REMARK 465 GLY H 137 REMARK 465 SER H 192 REMARK 465 SER H 193 REMARK 465 LEU H 194 REMARK 465 GLY H 195 REMARK 465 THR H 196 REMARK 465 GLN H 197 REMARK 465 GLU H 217 REMARK 465 PRO H 218 REMARK 465 LYS H 219 REMARK 465 SER H 220 REMARK 465 CYS H 221 REMARK 465 ASP H 222 REMARK 465 LYS H 223 REMARK 465 THR H 224 REMARK 465 HIS H 225 REMARK 465 THR H 226 REMARK 465 HIS H 227 REMARK 465 HIS H 228 REMARK 465 HIS H 229 REMARK 465 HIS H 230 REMARK 465 HIS H 231 REMARK 465 HIS H 232 REMARK 465 PRO H 233 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR L 51 -49.47 71.61 REMARK 500 SER L 52 14.55 -146.18 REMARK 500 ASN L 138 78.28 55.63 REMARK 500 ARG L 211 108.11 -58.79 REMARK 500 SER H 15 -9.88 80.08 REMARK 500 ARG H 26 151.28 69.95 REMARK 500 ARG H 26 143.66 70.74 REMARK 500 SER H 28 -115.75 -139.36 REMARK 500 ARG H 66 8.50 -156.71 REMARK 500 ALA H 100A 50.81 -141.30 REMARK 500 ASP H 148 64.83 64.18 REMARK 500 REMARK 500 REMARK: NULL DBREF 8VGG L 1 214 PDB 8VGG 8VGG 1 214 DBREF 8VGG H 1 233 PDB 8VGG 8VGG 1 233 SEQRES 1 L 217 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 217 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN SER ILE SEQRES 3 L 217 LYS SER VAL TYR ASN ASN ARG LEU GLY TRP TYR GLN GLN SEQRES 4 L 217 LYS CYS GLY LYS ALA PRO LYS LEU LEU ILE TYR GLU THR SEQRES 5 L 217 SER ILE LEU THR SER GLY VAL PRO SER ARG PHE SER GLY SEQRES 6 L 217 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER SEQRES 7 L 217 LEU GLN CYS GLU ASP PHE ALA THR TYR TYR CYS ALA GLY SEQRES 8 L 217 GLY PHE ASP ARG SER GLY ASP THR THR PHE GLY GLN GLY SEQRES 9 L 217 THR LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER SEQRES 10 L 217 VAL CYS ILE PHE PRO PRO SER ASP GLU CYS LEU LYS SER SEQRES 11 L 217 GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR SEQRES 12 L 217 PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA SEQRES 13 L 217 LEU GLN SER GLY ASN SER GLN GLU SER VAL THR CYS GLN SEQRES 14 L 217 ASP SER LYS ASP CYS THR TYR SER LEU SER SER THR LEU SEQRES 15 L 217 THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR SEQRES 16 L 217 ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL SEQRES 17 L 217 THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 H 238 GLU VAL GLN LEU VAL GLU SER GLY PRO GLY CYS VAL LYS SEQRES 2 H 238 PRO SER GLU THR LEU SER LEU THR CYS THR VAL SER ARG SEQRES 3 H 238 PHE SER LEU ILE GLY TYR ALA ILE THR TRP ILE ARG GLN SEQRES 4 H 238 PRO PRO GLY LYS GLY LEU GLU TRP ILE GLY GLY ILE SER SEQRES 5 H 238 SER ALA ALA THR THR PHE TYR SER SER TRP ALA LYS SER SEQRES 6 H 238 ARG VAL THR ILE SER VAL ASP THR SER LYS ASN GLN PHE SEQRES 7 H 238 SER LEU LYS LEU SER SER VAL THR ALA ALA ASP THR ALA SEQRES 8 H 238 VAL TYR TYR CYS ALA ARG ASP PRO ARG GLY TYR GLY ALA SEQRES 9 H 238 ALA LEU ASP ARG LEU ASP LEU TRP GLY GLN GLY THR CYS SEQRES 10 H 238 VAL THR VAL SER SER PHE SER THR LYS GLY PRO SER VAL SEQRES 11 H 238 CYS PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY SEQRES 12 H 238 THR ALA CYS LEU GLY CYS LEU VAL LYS ASP TYR PHE CYS SEQRES 13 H 238 GLU CYS PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU SEQRES 14 H 238 THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SEQRES 15 H 238 SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SEQRES 16 H 238 SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL SEQRES 17 H 238 ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL SEQRES 18 H 238 GLU PRO LYS SER CYS ASP LYS THR HIS THR HIS HIS HIS SEQRES 19 H 238 HIS HIS HIS PRO FORMUL 3 HOH *11(H2 O) HELIX 1 AA1 VAL L 28 ASN L 31 5 4 HELIX 2 AA2 GLN L 79 PHE L 83 5 5 HELIX 3 AA3 GLU L 123 SER L 127 5 5 HELIX 4 AA4 LYS L 183 HIS L 189 1 7 HELIX 5 AA5 THR H 83 THR H 87 5 5 HELIX 6 AA6 SER H 161 ALA H 163 5 3 HELIX 7 AA7 PRO H 207 ASN H 209 5 3 SHEET 1 AA1 4 THR L 5 SER L 7 0 SHEET 2 AA1 4 VAL L 19 GLN L 24 -1 O GLN L 24 N THR L 5 SHEET 3 AA1 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA1 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA2 6 SER L 10 SER L 14 0 SHEET 2 AA2 6 THR L 102 LYS L 107 1 O LYS L 107 N ALA L 13 SHEET 3 AA2 6 ALA L 84 GLY L 91 -1 N TYR L 86 O THR L 102 SHEET 4 AA2 6 LEU L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AA2 6 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 AA2 6 ILE L 53 LEU L 54 -1 O ILE L 53 N TYR L 49 SHEET 1 AA3 4 SER L 10 SER L 14 0 SHEET 2 AA3 4 THR L 102 LYS L 107 1 O LYS L 107 N ALA L 13 SHEET 3 AA3 4 ALA L 84 GLY L 91 -1 N TYR L 86 O THR L 102 SHEET 4 AA3 4 THR L 96 PHE L 98 -1 O THR L 97 N GLY L 90 SHEET 1 AA4 4 SER L 114 PHE L 118 0 SHEET 2 AA4 4 THR L 129 PHE L 139 -1 O LEU L 135 N CYS L 116 SHEET 3 AA4 4 TYR L 173 SER L 182 -1 O TYR L 173 N PHE L 139 SHEET 4 AA4 4 SER L 159 VAL L 163 -1 N SER L 162 O SER L 176 SHEET 1 AA5 4 ALA L 153 LEU L 154 0 SHEET 2 AA5 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AA5 4 VAL L 191 THR L 197 -1 O ALA L 193 N LYS L 149 SHEET 4 AA5 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 AA6 4 GLN H 3 SER H 7 0 SHEET 2 AA6 4 LEU H 18 SER H 25 -1 O THR H 23 N VAL H 5 SHEET 3 AA6 4 GLN H 77 LEU H 82 -1 O LEU H 80 N LEU H 20 SHEET 4 AA6 4 VAL H 67 ASP H 72 -1 N SER H 70 O SER H 79 SHEET 1 AA7 6 CYS H 11 VAL H 12 0 SHEET 2 AA7 6 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA7 6 ALA H 88 ASP H 95 -1 N TYR H 90 O THR H 107 SHEET 4 AA7 6 ALA H 33 GLN H 39 -1 N GLN H 39 O VAL H 89 SHEET 5 AA7 6 GLU H 46 ILE H 51 -1 O ILE H 48 N TRP H 36 SHEET 6 AA7 6 THR H 57 TYR H 59 -1 O PHE H 58 N GLY H 50 SHEET 1 AA8 4 CYS H 11 VAL H 12 0 SHEET 2 AA8 4 THR H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA8 4 ALA H 88 ASP H 95 -1 N TYR H 90 O THR H 107 SHEET 4 AA8 4 LEU H 102 TRP H 103 -1 O LEU H 102 N ARG H 94 SHEET 1 AA9 4 SER H 124 LEU H 128 0 SHEET 2 AA9 4 THR H 139 TYR H 149 -1 O LYS H 147 N SER H 124 SHEET 3 AA9 4 TYR H 181 PRO H 190 -1 O LEU H 183 N VAL H 146 SHEET 4 AA9 4 VAL H 168 THR H 170 -1 N HIS H 169 O VAL H 186 SHEET 1 AB1 4 SER H 124 LEU H 128 0 SHEET 2 AB1 4 THR H 139 TYR H 149 -1 O LYS H 147 N SER H 124 SHEET 3 AB1 4 TYR H 181 PRO H 190 -1 O LEU H 183 N VAL H 146 SHEET 4 AB1 4 VAL H 174 LEU H 175 -1 N VAL H 174 O SER H 182 SHEET 1 AB2 3 VAL H 155 TRP H 159 0 SHEET 2 AB2 3 ILE H 200 HIS H 205 -1 O ASN H 202 N SER H 158 SHEET 3 AB2 3 THR H 210 LYS H 215 -1 O VAL H 212 N VAL H 203 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 2 CYS L 40 CYS L 165 1555 1555 2.03 SSBOND 3 CYS L 80 CYS L 171 1555 1555 2.03 SSBOND 4 CYS L 116 CYS H 141 1555 1555 2.04 SSBOND 5 CYS L 124 CYS H 126 1555 1555 2.03 SSBOND 6 CYS L 134 CYS L 194 1555 1555 2.03 SSBOND 7 CYS H 11 CYS H 151 1555 1555 2.04 SSBOND 8 CYS H 22 CYS H 92 1555 1555 2.03 SSBOND 9 CYS H 108 CYS H 153 1555 1555 2.03 SSBOND 10 CYS H 144 CYS H 201 1555 1555 2.03 CISPEP 1 SER L 7 PRO L 8 0 -3.42 CISPEP 2 TYR L 140 PRO L 141 0 1.82 CISPEP 3 PHE H 150 CYS H 151 0 1.81 CISPEP 4 CYS H 153 PRO H 154 0 3.72 CRYST1 115.494 115.494 136.039 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008658 0.004999 0.000000 0.00000 SCALE2 0.000000 0.009998 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007351 0.00000