data_8VKD # _entry.id 8VKD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8VKD pdb_00008vkd 10.2210/pdb8vkd/pdb WWPDB D_1000280424 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-07-17 2 'Structure model' 1 1 2024-07-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8VKD _pdbx_database_status.recvd_initial_deposition_date 2024-01-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 4 _pdbx_contact_author.email franzen@ncsu.edu _pdbx_contact_author.name_first Stefan _pdbx_contact_author.name_last Franzen _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2364-2287 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Aktar, M.S.' 1 ? 'de Serrano, V.S.' 2 ? 'Ghiladi, R.A.' 3 ? 'Franzen, S.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochemistry _citation.journal_id_ASTM BICHAW _citation.journal_id_CSD 0033 _citation.journal_id_ISSN 0006-2960 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 63 _citation.language ? _citation.page_first 1761 _citation.page_last 1773 _citation.title 'Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.biochem.4c00179 _citation.pdbx_database_id_PubMed 38959050 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Aktar, M.S.' 1 ? primary 'de Serrano, V.' 2 ? primary 'Ghiladi, R.A.' 3 ? primary 'Franzen, S.' 4 0000-0003-2364-2287 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dehaloperoxidase A' 15548.597 2 ? ? ? ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 2 ? ? ? ? 5 non-polymer syn 4-NITROCATECHOL 155.108 2 ? ? ? ? 6 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 1 ? ? ? ? 7 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 8 water nat water 18.015 202 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GFKQDIATIRGDLRTYAQDIFLAFLNKYPDERRYFKNYVGKSDQELKSMAKFGDHTEKVFNLMMEVADRATDCVPLASDA NTLVQMKQHSSLTTGNFEKLFVALVEYMRASGQSFDSQSWDRFGKNLVSALSSAGMK ; _entity_poly.pdbx_seq_one_letter_code_can ;GFKQDIATIRGDLRTYAQDIFLAFLNKYPDERRYFKNYVGKSDQELKSMAKFGDHTEKVFNLMMEVADRATDCVPLASDA NTLVQMKQHSSLTTGNFEKLFVALVEYMRASGQSFDSQSWDRFGKNLVSALSSAGMK ; _entity_poly.pdbx_strand_id AAA,BBB _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 GLYCEROL GOL 4 'DI(HYDROXYETHYL)ETHER' PEG 5 4-NITROCATECHOL 4NC 6 'DIMETHYL SULFOXIDE' DMS 7 'SULFATE ION' SO4 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PHE n 1 3 LYS n 1 4 GLN n 1 5 ASP n 1 6 ILE n 1 7 ALA n 1 8 THR n 1 9 ILE n 1 10 ARG n 1 11 GLY n 1 12 ASP n 1 13 LEU n 1 14 ARG n 1 15 THR n 1 16 TYR n 1 17 ALA n 1 18 GLN n 1 19 ASP n 1 20 ILE n 1 21 PHE n 1 22 LEU n 1 23 ALA n 1 24 PHE n 1 25 LEU n 1 26 ASN n 1 27 LYS n 1 28 TYR n 1 29 PRO n 1 30 ASP n 1 31 GLU n 1 32 ARG n 1 33 ARG n 1 34 TYR n 1 35 PHE n 1 36 LYS n 1 37 ASN n 1 38 TYR n 1 39 VAL n 1 40 GLY n 1 41 LYS n 1 42 SER n 1 43 ASP n 1 44 GLN n 1 45 GLU n 1 46 LEU n 1 47 LYS n 1 48 SER n 1 49 MET n 1 50 ALA n 1 51 LYS n 1 52 PHE n 1 53 GLY n 1 54 ASP n 1 55 HIS n 1 56 THR n 1 57 GLU n 1 58 LYS n 1 59 VAL n 1 60 PHE n 1 61 ASN n 1 62 LEU n 1 63 MET n 1 64 MET n 1 65 GLU n 1 66 VAL n 1 67 ALA n 1 68 ASP n 1 69 ARG n 1 70 ALA n 1 71 THR n 1 72 ASP n 1 73 CYS n 1 74 VAL n 1 75 PRO n 1 76 LEU n 1 77 ALA n 1 78 SER n 1 79 ASP n 1 80 ALA n 1 81 ASN n 1 82 THR n 1 83 LEU n 1 84 VAL n 1 85 GLN n 1 86 MET n 1 87 LYS n 1 88 GLN n 1 89 HIS n 1 90 SER n 1 91 SER n 1 92 LEU n 1 93 THR n 1 94 THR n 1 95 GLY n 1 96 ASN n 1 97 PHE n 1 98 GLU n 1 99 LYS n 1 100 LEU n 1 101 PHE n 1 102 VAL n 1 103 ALA n 1 104 LEU n 1 105 VAL n 1 106 GLU n 1 107 TYR n 1 108 MET n 1 109 ARG n 1 110 ALA n 1 111 SER n 1 112 GLY n 1 113 GLN n 1 114 SER n 1 115 PHE n 1 116 ASP n 1 117 SER n 1 118 GLN n 1 119 SER n 1 120 TRP n 1 121 ASP n 1 122 ARG n 1 123 PHE n 1 124 GLY n 1 125 LYS n 1 126 ASN n 1 127 LEU n 1 128 VAL n 1 129 SER n 1 130 ALA n 1 131 LEU n 1 132 SER n 1 133 SER n 1 134 ALA n 1 135 GLY n 1 136 MET n 1 137 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 137 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Amphitrite ornata' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 129555 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4NC non-polymer . 4-NITROCATECHOL ? 'C6 H5 N O4' 155.108 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY AAA . n A 1 2 PHE 2 2 2 PHE PHE AAA . n A 1 3 LYS 3 3 3 LYS LYS AAA . n A 1 4 GLN 4 4 4 GLN GLN AAA . n A 1 5 ASP 5 5 5 ASP ASP AAA . n A 1 6 ILE 6 6 6 ILE ILE AAA . n A 1 7 ALA 7 7 7 ALA ALA AAA . n A 1 8 THR 8 8 8 THR THR AAA . n A 1 9 ILE 9 9 9 ILE ILE AAA . n A 1 10 ARG 10 10 10 ARG ARG AAA . n A 1 11 GLY 11 11 11 GLY GLY AAA . n A 1 12 ASP 12 12 12 ASP ASP AAA . n A 1 13 LEU 13 13 13 LEU LEU AAA . n A 1 14 ARG 14 14 14 ARG ARG AAA . n A 1 15 THR 15 15 15 THR THR AAA . n A 1 16 TYR 16 16 16 TYR TYR AAA . n A 1 17 ALA 17 17 17 ALA ALA AAA . n A 1 18 GLN 18 18 18 GLN GLN AAA . n A 1 19 ASP 19 19 19 ASP ASP AAA . n A 1 20 ILE 20 20 20 ILE ILE AAA . n A 1 21 PHE 21 21 21 PHE PHE AAA . n A 1 22 LEU 22 22 22 LEU LEU AAA . n A 1 23 ALA 23 23 23 ALA ALA AAA . n A 1 24 PHE 24 24 24 PHE PHE AAA . n A 1 25 LEU 25 25 25 LEU LEU AAA . n A 1 26 ASN 26 26 26 ASN ASN AAA . n A 1 27 LYS 27 27 27 LYS LYS AAA . n A 1 28 TYR 28 28 28 TYR TYR AAA . n A 1 29 PRO 29 29 29 PRO PRO AAA . n A 1 30 ASP 30 30 30 ASP ASP AAA . n A 1 31 GLU 31 31 31 GLU GLU AAA . n A 1 32 ARG 32 32 32 ARG ARG AAA . n A 1 33 ARG 33 33 33 ARG ARG AAA . n A 1 34 TYR 34 34 34 TYR TYR AAA . n A 1 35 PHE 35 35 35 PHE PHE AAA . n A 1 36 LYS 36 36 36 LYS LYS AAA . n A 1 37 ASN 37 37 37 ASN ASN AAA . n A 1 38 TYR 38 38 38 TYR TYR AAA . n A 1 39 VAL 39 39 39 VAL VAL AAA . n A 1 40 GLY 40 40 40 GLY GLY AAA . n A 1 41 LYS 41 41 41 LYS LYS AAA . n A 1 42 SER 42 42 42 SER SER AAA . n A 1 43 ASP 43 43 43 ASP ASP AAA . n A 1 44 GLN 44 44 44 GLN GLN AAA . n A 1 45 GLU 45 45 45 GLU GLU AAA . n A 1 46 LEU 46 46 46 LEU LEU AAA . n A 1 47 LYS 47 47 47 LYS LYS AAA . n A 1 48 SER 48 48 48 SER SER AAA . n A 1 49 MET 49 49 49 MET MET AAA . n A 1 50 ALA 50 50 50 ALA ALA AAA . n A 1 51 LYS 51 51 51 LYS LYS AAA . n A 1 52 PHE 52 52 52 PHE PHE AAA . n A 1 53 GLY 53 53 53 GLY GLY AAA . n A 1 54 ASP 54 54 54 ASP ASP AAA . n A 1 55 HIS 55 55 55 HIS HIS AAA . n A 1 56 THR 56 56 56 THR THR AAA . n A 1 57 GLU 57 57 57 GLU GLU AAA . n A 1 58 LYS 58 58 58 LYS LYS AAA . n A 1 59 VAL 59 59 59 VAL VAL AAA . n A 1 60 PHE 60 60 60 PHE PHE AAA . n A 1 61 ASN 61 61 61 ASN ASN AAA . n A 1 62 LEU 62 62 62 LEU LEU AAA . n A 1 63 MET 63 63 63 MET MET AAA . n A 1 64 MET 64 64 64 MET MET AAA . n A 1 65 GLU 65 65 65 GLU GLU AAA . n A 1 66 VAL 66 66 66 VAL VAL AAA . n A 1 67 ALA 67 67 67 ALA ALA AAA . n A 1 68 ASP 68 68 68 ASP ASP AAA . n A 1 69 ARG 69 69 69 ARG ARG AAA . n A 1 70 ALA 70 70 70 ALA ALA AAA . n A 1 71 THR 71 71 71 THR THR AAA . n A 1 72 ASP 72 72 72 ASP ASP AAA . n A 1 73 CYS 73 73 73 CYS CYS AAA . n A 1 74 VAL 74 74 74 VAL VAL AAA . n A 1 75 PRO 75 75 75 PRO PRO AAA . n A 1 76 LEU 76 76 76 LEU LEU AAA . n A 1 77 ALA 77 77 77 ALA ALA AAA . n A 1 78 SER 78 78 78 SER SER AAA . n A 1 79 ASP 79 79 79 ASP ASP AAA . n A 1 80 ALA 80 80 80 ALA ALA AAA . n A 1 81 ASN 81 81 81 ASN ASN AAA . n A 1 82 THR 82 82 82 THR THR AAA . n A 1 83 LEU 83 83 83 LEU LEU AAA . n A 1 84 VAL 84 84 84 VAL VAL AAA . n A 1 85 GLN 85 85 85 GLN GLN AAA . n A 1 86 MET 86 86 86 MET MET AAA . n A 1 87 LYS 87 87 87 LYS LYS AAA . n A 1 88 GLN 88 88 88 GLN GLN AAA . n A 1 89 HIS 89 89 89 HIS HIS AAA . n A 1 90 SER 90 90 90 SER SER AAA . n A 1 91 SER 91 91 91 SER SER AAA . n A 1 92 LEU 92 92 92 LEU LEU AAA . n A 1 93 THR 93 93 93 THR THR AAA . n A 1 94 THR 94 94 94 THR THR AAA . n A 1 95 GLY 95 95 95 GLY GLY AAA . n A 1 96 ASN 96 96 96 ASN ASN AAA . n A 1 97 PHE 97 97 97 PHE PHE AAA . n A 1 98 GLU 98 98 98 GLU GLU AAA . n A 1 99 LYS 99 99 99 LYS LYS AAA . n A 1 100 LEU 100 100 100 LEU LEU AAA . n A 1 101 PHE 101 101 101 PHE PHE AAA . n A 1 102 VAL 102 102 102 VAL VAL AAA . n A 1 103 ALA 103 103 103 ALA ALA AAA . n A 1 104 LEU 104 104 104 LEU LEU AAA . n A 1 105 VAL 105 105 105 VAL VAL AAA . n A 1 106 GLU 106 106 106 GLU GLU AAA . n A 1 107 TYR 107 107 107 TYR TYR AAA . n A 1 108 MET 108 108 108 MET MET AAA . n A 1 109 ARG 109 109 109 ARG ARG AAA . n A 1 110 ALA 110 110 110 ALA ALA AAA . n A 1 111 SER 111 111 111 SER SER AAA . n A 1 112 GLY 112 112 112 GLY GLY AAA . n A 1 113 GLN 113 113 113 GLN GLN AAA . n A 1 114 SER 114 114 114 SER SER AAA . n A 1 115 PHE 115 115 115 PHE PHE AAA . n A 1 116 ASP 116 116 116 ASP ASP AAA . n A 1 117 SER 117 117 117 SER SER AAA . n A 1 118 GLN 118 118 118 GLN GLN AAA . n A 1 119 SER 119 119 119 SER SER AAA . n A 1 120 TRP 120 120 120 TRP TRP AAA . n A 1 121 ASP 121 121 121 ASP ASP AAA . n A 1 122 ARG 122 122 122 ARG ARG AAA . n A 1 123 PHE 123 123 123 PHE PHE AAA . n A 1 124 GLY 124 124 124 GLY GLY AAA . n A 1 125 LYS 125 125 125 LYS LYS AAA . n A 1 126 ASN 126 126 126 ASN ASN AAA . n A 1 127 LEU 127 127 127 LEU LEU AAA . n A 1 128 VAL 128 128 128 VAL VAL AAA . n A 1 129 SER 129 129 129 SER SER AAA . n A 1 130 ALA 130 130 130 ALA ALA AAA . n A 1 131 LEU 131 131 131 LEU LEU AAA . n A 1 132 SER 132 132 132 SER SER AAA . n A 1 133 SER 133 133 133 SER SER AAA . n A 1 134 ALA 134 134 134 ALA ALA AAA . n A 1 135 GLY 135 135 135 GLY GLY AAA . n A 1 136 MET 136 136 136 MET MET AAA . n A 1 137 LYS 137 137 137 LYS LYS AAA . n B 1 1 GLY 1 1 1 GLY GLY BBB . n B 1 2 PHE 2 2 2 PHE PHE BBB . n B 1 3 LYS 3 3 3 LYS LYS BBB . n B 1 4 GLN 4 4 4 GLN GLN BBB . n B 1 5 ASP 5 5 5 ASP ASP BBB . n B 1 6 ILE 6 6 6 ILE ILE BBB . n B 1 7 ALA 7 7 7 ALA ALA BBB . n B 1 8 THR 8 8 8 THR THR BBB . n B 1 9 ILE 9 9 9 ILE ILE BBB . n B 1 10 ARG 10 10 10 ARG ARG BBB . n B 1 11 GLY 11 11 11 GLY GLY BBB . n B 1 12 ASP 12 12 12 ASP ASP BBB . n B 1 13 LEU 13 13 13 LEU LEU BBB . n B 1 14 ARG 14 14 14 ARG ARG BBB . n B 1 15 THR 15 15 15 THR THR BBB . n B 1 16 TYR 16 16 16 TYR TYR BBB . n B 1 17 ALA 17 17 17 ALA ALA BBB . n B 1 18 GLN 18 18 18 GLN GLN BBB . n B 1 19 ASP 19 19 19 ASP ASP BBB . n B 1 20 ILE 20 20 20 ILE ILE BBB . n B 1 21 PHE 21 21 21 PHE PHE BBB . n B 1 22 LEU 22 22 22 LEU LEU BBB . n B 1 23 ALA 23 23 23 ALA ALA BBB . n B 1 24 PHE 24 24 24 PHE PHE BBB . n B 1 25 LEU 25 25 25 LEU LEU BBB . n B 1 26 ASN 26 26 26 ASN ASN BBB . n B 1 27 LYS 27 27 27 LYS LYS BBB . n B 1 28 TYR 28 28 28 TYR TYR BBB . n B 1 29 PRO 29 29 29 PRO PRO BBB . n B 1 30 ASP 30 30 30 ASP ASP BBB . n B 1 31 GLU 31 31 31 GLU GLU BBB . n B 1 32 ARG 32 32 32 ARG ARG BBB . n B 1 33 ARG 33 33 33 ARG ARG BBB . n B 1 34 TYR 34 34 34 TYR TYR BBB . n B 1 35 PHE 35 35 35 PHE PHE BBB . n B 1 36 LYS 36 36 36 LYS LYS BBB . n B 1 37 ASN 37 37 37 ASN ASN BBB . n B 1 38 TYR 38 38 38 TYR TYR BBB . n B 1 39 VAL 39 39 39 VAL VAL BBB . n B 1 40 GLY 40 40 40 GLY GLY BBB . n B 1 41 LYS 41 41 41 LYS LYS BBB . n B 1 42 SER 42 42 42 SER SER BBB . n B 1 43 ASP 43 43 43 ASP ASP BBB . n B 1 44 GLN 44 44 44 GLN GLN BBB . n B 1 45 GLU 45 45 45 GLU GLU BBB . n B 1 46 LEU 46 46 46 LEU LEU BBB . n B 1 47 LYS 47 47 47 LYS LYS BBB . n B 1 48 SER 48 48 48 SER SER BBB . n B 1 49 MET 49 49 49 MET MET BBB . n B 1 50 ALA 50 50 50 ALA ALA BBB . n B 1 51 LYS 51 51 51 LYS LYS BBB . n B 1 52 PHE 52 52 52 PHE PHE BBB . n B 1 53 GLY 53 53 53 GLY GLY BBB . n B 1 54 ASP 54 54 54 ASP ASP BBB . n B 1 55 HIS 55 55 55 HIS HIS BBB . n B 1 56 THR 56 56 56 THR THR BBB . n B 1 57 GLU 57 57 57 GLU GLU BBB . n B 1 58 LYS 58 58 58 LYS LYS BBB . n B 1 59 VAL 59 59 59 VAL VAL BBB . n B 1 60 PHE 60 60 60 PHE PHE BBB . n B 1 61 ASN 61 61 61 ASN ASN BBB . n B 1 62 LEU 62 62 62 LEU LEU BBB . n B 1 63 MET 63 63 63 MET MET BBB . n B 1 64 MET 64 64 64 MET MET BBB . n B 1 65 GLU 65 65 65 GLU GLU BBB . n B 1 66 VAL 66 66 66 VAL VAL BBB . n B 1 67 ALA 67 67 67 ALA ALA BBB . n B 1 68 ASP 68 68 68 ASP ASP BBB . n B 1 69 ARG 69 69 69 ARG ARG BBB . n B 1 70 ALA 70 70 70 ALA ALA BBB . n B 1 71 THR 71 71 71 THR THR BBB . n B 1 72 ASP 72 72 72 ASP ASP BBB . n B 1 73 CYS 73 73 73 CYS CYS BBB . n B 1 74 VAL 74 74 74 VAL VAL BBB . n B 1 75 PRO 75 75 75 PRO PRO BBB . n B 1 76 LEU 76 76 76 LEU LEU BBB . n B 1 77 ALA 77 77 77 ALA ALA BBB . n B 1 78 SER 78 78 78 SER SER BBB . n B 1 79 ASP 79 79 79 ASP ASP BBB . n B 1 80 ALA 80 80 80 ALA ALA BBB . n B 1 81 ASN 81 81 81 ASN ASN BBB . n B 1 82 THR 82 82 82 THR THR BBB . n B 1 83 LEU 83 83 83 LEU LEU BBB . n B 1 84 VAL 84 84 84 VAL VAL BBB . n B 1 85 GLN 85 85 85 GLN GLN BBB . n B 1 86 MET 86 86 86 MET MET BBB . n B 1 87 LYS 87 87 87 LYS LYS BBB . n B 1 88 GLN 88 88 88 GLN GLN BBB . n B 1 89 HIS 89 89 89 HIS HIS BBB . n B 1 90 SER 90 90 90 SER SER BBB . n B 1 91 SER 91 91 91 SER SER BBB . n B 1 92 LEU 92 92 92 LEU LEU BBB . n B 1 93 THR 93 93 93 THR THR BBB . n B 1 94 THR 94 94 94 THR THR BBB . n B 1 95 GLY 95 95 95 GLY GLY BBB . n B 1 96 ASN 96 96 96 ASN ASN BBB . n B 1 97 PHE 97 97 97 PHE PHE BBB . n B 1 98 GLU 98 98 98 GLU GLU BBB . n B 1 99 LYS 99 99 99 LYS LYS BBB . n B 1 100 LEU 100 100 100 LEU LEU BBB . n B 1 101 PHE 101 101 101 PHE PHE BBB . n B 1 102 VAL 102 102 102 VAL VAL BBB . n B 1 103 ALA 103 103 103 ALA ALA BBB . n B 1 104 LEU 104 104 104 LEU LEU BBB . n B 1 105 VAL 105 105 105 VAL VAL BBB . n B 1 106 GLU 106 106 106 GLU GLU BBB . n B 1 107 TYR 107 107 107 TYR TYR BBB . n B 1 108 MET 108 108 108 MET MET BBB . n B 1 109 ARG 109 109 109 ARG ARG BBB . n B 1 110 ALA 110 110 110 ALA ALA BBB . n B 1 111 SER 111 111 111 SER SER BBB . n B 1 112 GLY 112 112 112 GLY ALA BBB . n B 1 113 GLN 113 113 113 GLN GLN BBB . n B 1 114 SER 114 114 114 SER SER BBB . n B 1 115 PHE 115 115 115 PHE PHE BBB . n B 1 116 ASP 116 116 116 ASP ASP BBB . n B 1 117 SER 117 117 117 SER SER BBB . n B 1 118 GLN 118 118 118 GLN GLN BBB . n B 1 119 SER 119 119 119 SER SER BBB . n B 1 120 TRP 120 120 120 TRP TRP BBB . n B 1 121 ASP 121 121 121 ASP ASP BBB . n B 1 122 ARG 122 122 122 ARG ARG BBB . n B 1 123 PHE 123 123 123 PHE PHE BBB . n B 1 124 GLY 124 124 124 GLY GLY BBB . n B 1 125 LYS 125 125 125 LYS LYS BBB . n B 1 126 ASN 126 126 126 ASN ASN BBB . n B 1 127 LEU 127 127 127 LEU LEU BBB . n B 1 128 VAL 128 128 128 VAL VAL BBB . n B 1 129 SER 129 129 129 SER SER BBB . n B 1 130 ALA 130 130 130 ALA ALA BBB . n B 1 131 LEU 131 131 131 LEU LEU BBB . n B 1 132 SER 132 132 132 SER SER BBB . n B 1 133 SER 133 133 133 SER SER BBB . n B 1 134 ALA 134 134 134 ALA ALA BBB . n B 1 135 GLY 135 135 135 GLY GLY BBB . n B 1 136 MET 136 136 136 MET MET BBB . n B 1 137 LYS 137 137 137 LYS LYS BBB . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM 1 201 139 HEM HEM AAA . D 3 GOL 1 202 140 GOL GOL AAA . E 4 PEG 1 203 141 PEG PEG AAA . F 5 4NC 1 204 142 4NC 4NC AAA . G 6 DMS 1 205 143 DMS DMS AAA . H 4 PEG 1 206 144 PEG PEG AAA . I 3 GOL 1 207 146 GOL GOL AAA . J 7 SO4 1 208 3 SO4 SO4 AAA . K 2 HEM 1 201 139 HEM HEM BBB . L 5 4NC 1 202 140 4NC 4NC BBB . M 7 SO4 1 203 1 SO4 SO4 BBB . N 7 SO4 1 204 2 SO4 SO4 BBB . O 8 HOH 1 301 12 HOH HOH AAA . O 8 HOH 2 302 42 HOH HOH AAA . O 8 HOH 3 303 95 HOH HOH AAA . O 8 HOH 4 304 98 HOH HOH AAA . O 8 HOH 5 305 210 HOH HOH AAA . O 8 HOH 6 306 159 HOH HOH AAA . O 8 HOH 7 307 72 HOH HOH AAA . O 8 HOH 8 308 75 HOH HOH AAA . O 8 HOH 9 309 211 HOH HOH AAA . O 8 HOH 10 310 109 HOH HOH AAA . O 8 HOH 11 311 204 HOH HOH AAA . O 8 HOH 12 312 47 HOH HOH AAA . O 8 HOH 13 313 163 HOH HOH AAA . O 8 HOH 14 314 76 HOH HOH AAA . O 8 HOH 15 315 223 HOH HOH AAA . O 8 HOH 16 316 36 HOH HOH AAA . O 8 HOH 17 317 200 HOH HOH AAA . O 8 HOH 18 318 92 HOH HOH AAA . O 8 HOH 19 319 82 HOH HOH AAA . O 8 HOH 20 320 114 HOH HOH AAA . O 8 HOH 21 321 91 HOH HOH AAA . O 8 HOH 22 322 29 HOH HOH AAA . O 8 HOH 23 323 15 HOH HOH AAA . O 8 HOH 24 324 40 HOH HOH AAA . O 8 HOH 25 325 89 HOH HOH AAA . O 8 HOH 26 326 102 HOH HOH AAA . O 8 HOH 27 327 79 HOH HOH AAA . O 8 HOH 28 328 209 HOH HOH AAA . O 8 HOH 29 329 85 HOH HOH AAA . O 8 HOH 30 330 58 HOH HOH AAA . O 8 HOH 31 331 94 HOH HOH AAA . O 8 HOH 32 332 24 HOH HOH AAA . O 8 HOH 33 333 201 HOH HOH AAA . O 8 HOH 34 334 203 HOH HOH AAA . O 8 HOH 35 335 84 HOH HOH AAA . O 8 HOH 36 336 74 HOH HOH AAA . O 8 HOH 37 337 14 HOH HOH AAA . O 8 HOH 38 338 67 HOH HOH AAA . O 8 HOH 39 339 6 HOH HOH AAA . O 8 HOH 40 340 7 HOH HOH AAA . O 8 HOH 41 341 13 HOH HOH AAA . O 8 HOH 42 342 146 HOH HOH AAA . O 8 HOH 43 343 65 HOH HOH AAA . O 8 HOH 44 344 108 HOH HOH AAA . O 8 HOH 45 345 50 HOH HOH AAA . O 8 HOH 46 346 11 HOH HOH AAA . O 8 HOH 47 347 131 HOH HOH AAA . O 8 HOH 48 348 22 HOH HOH AAA . O 8 HOH 49 349 48 HOH HOH AAA . O 8 HOH 50 350 63 HOH HOH AAA . O 8 HOH 51 351 81 HOH HOH AAA . O 8 HOH 52 352 34 HOH HOH AAA . O 8 HOH 53 353 66 HOH HOH AAA . O 8 HOH 54 354 104 HOH HOH AAA . O 8 HOH 55 355 52 HOH HOH AAA . O 8 HOH 56 356 161 HOH HOH AAA . O 8 HOH 57 357 55 HOH HOH AAA . O 8 HOH 58 358 26 HOH HOH AAA . O 8 HOH 59 359 57 HOH HOH AAA . O 8 HOH 60 360 41 HOH HOH AAA . O 8 HOH 61 361 212 HOH HOH AAA . O 8 HOH 62 362 68 HOH HOH AAA . O 8 HOH 63 363 31 HOH HOH AAA . O 8 HOH 64 364 150 HOH HOH AAA . O 8 HOH 65 365 33 HOH HOH AAA . O 8 HOH 66 366 103 HOH HOH AAA . O 8 HOH 67 367 38 HOH HOH AAA . O 8 HOH 68 368 208 HOH HOH AAA . O 8 HOH 69 369 71 HOH HOH AAA . O 8 HOH 70 370 59 HOH HOH AAA . O 8 HOH 71 371 147 HOH HOH AAA . O 8 HOH 72 372 120 HOH HOH AAA . O 8 HOH 73 373 158 HOH HOH AAA . O 8 HOH 74 374 125 HOH HOH AAA . O 8 HOH 75 375 206 HOH HOH AAA . O 8 HOH 76 376 160 HOH HOH AAA . O 8 HOH 77 377 133 HOH HOH AAA . O 8 HOH 78 378 148 HOH HOH AAA . O 8 HOH 79 379 45 HOH HOH AAA . O 8 HOH 80 380 78 HOH HOH AAA . O 8 HOH 81 381 205 HOH HOH AAA . O 8 HOH 82 382 144 HOH HOH AAA . O 8 HOH 83 383 100 HOH HOH AAA . O 8 HOH 84 384 44 HOH HOH AAA . O 8 HOH 85 385 162 HOH HOH AAA . O 8 HOH 86 386 1 HOH HOH AAA . O 8 HOH 87 387 145 HOH HOH AAA . O 8 HOH 88 388 142 HOH HOH AAA . O 8 HOH 89 389 207 HOH HOH AAA . O 8 HOH 90 390 112 HOH HOH AAA . O 8 HOH 91 391 137 HOH HOH AAA . O 8 HOH 92 392 214 HOH HOH AAA . O 8 HOH 93 393 119 HOH HOH AAA . O 8 HOH 94 394 127 HOH HOH AAA . O 8 HOH 95 395 105 HOH HOH AAA . O 8 HOH 96 396 140 HOH HOH AAA . O 8 HOH 97 397 199 HOH HOH AAA . O 8 HOH 98 398 96 HOH HOH AAA . O 8 HOH 99 399 141 HOH HOH AAA . O 8 HOH 100 400 124 HOH HOH AAA . O 8 HOH 101 401 101 HOH HOH AAA . O 8 HOH 102 402 62 HOH HOH AAA . O 8 HOH 103 403 116 HOH HOH AAA . O 8 HOH 104 404 115 HOH HOH AAA . O 8 HOH 105 405 61 HOH HOH AAA . P 8 HOH 1 301 123 HOH HOH BBB . P 8 HOH 2 302 32 HOH HOH BBB . P 8 HOH 3 303 178 HOH HOH BBB . P 8 HOH 4 304 53 HOH HOH BBB . P 8 HOH 5 305 179 HOH HOH BBB . P 8 HOH 6 306 171 HOH HOH BBB . P 8 HOH 7 307 165 HOH HOH BBB . P 8 HOH 8 308 164 HOH HOH BBB . P 8 HOH 9 309 220 HOH HOH BBB . P 8 HOH 10 310 181 HOH HOH BBB . P 8 HOH 11 311 25 HOH HOH BBB . P 8 HOH 12 312 222 HOH HOH BBB . P 8 HOH 13 313 157 HOH HOH BBB . P 8 HOH 14 314 17 HOH HOH BBB . P 8 HOH 15 315 30 HOH HOH BBB . P 8 HOH 16 316 192 HOH HOH BBB . P 8 HOH 17 317 166 HOH HOH BBB . P 8 HOH 18 318 156 HOH HOH BBB . P 8 HOH 19 319 90 HOH HOH BBB . P 8 HOH 20 320 87 HOH HOH BBB . P 8 HOH 21 321 27 HOH HOH BBB . P 8 HOH 22 322 153 HOH HOH BBB . P 8 HOH 23 323 190 HOH HOH BBB . P 8 HOH 24 324 175 HOH HOH BBB . P 8 HOH 25 325 173 HOH HOH BBB . P 8 HOH 26 326 198 HOH HOH BBB . P 8 HOH 27 327 185 HOH HOH BBB . P 8 HOH 28 328 51 HOH HOH BBB . P 8 HOH 29 329 4 HOH HOH BBB . P 8 HOH 30 330 152 HOH HOH BBB . P 8 HOH 31 331 182 HOH HOH BBB . P 8 HOH 32 332 218 HOH HOH BBB . P 8 HOH 33 333 187 HOH HOH BBB . P 8 HOH 34 334 18 HOH HOH BBB . P 8 HOH 35 335 189 HOH HOH BBB . P 8 HOH 36 336 9 HOH HOH BBB . P 8 HOH 37 337 177 HOH HOH BBB . P 8 HOH 38 338 19 HOH HOH BBB . P 8 HOH 39 339 169 HOH HOH BBB . P 8 HOH 40 340 5 HOH HOH BBB . P 8 HOH 41 341 8 HOH HOH BBB . P 8 HOH 42 342 49 HOH HOH BBB . P 8 HOH 43 343 60 HOH HOH BBB . P 8 HOH 44 344 186 HOH HOH BBB . P 8 HOH 45 345 154 HOH HOH BBB . P 8 HOH 46 346 170 HOH HOH BBB . P 8 HOH 47 347 73 HOH HOH BBB . P 8 HOH 48 348 70 HOH HOH BBB . P 8 HOH 49 349 216 HOH HOH BBB . P 8 HOH 50 350 217 HOH HOH BBB . P 8 HOH 51 351 113 HOH HOH BBB . P 8 HOH 52 352 151 HOH HOH BBB . P 8 HOH 53 353 176 HOH HOH BBB . P 8 HOH 54 354 132 HOH HOH BBB . P 8 HOH 55 355 219 HOH HOH BBB . P 8 HOH 56 356 10 HOH HOH BBB . P 8 HOH 57 357 196 HOH HOH BBB . P 8 HOH 58 358 193 HOH HOH BBB . P 8 HOH 59 359 16 HOH HOH BBB . P 8 HOH 60 360 184 HOH HOH BBB . P 8 HOH 61 361 21 HOH HOH BBB . P 8 HOH 62 362 20 HOH HOH BBB . P 8 HOH 63 363 215 HOH HOH BBB . P 8 HOH 64 364 135 HOH HOH BBB . P 8 HOH 65 365 110 HOH HOH BBB . P 8 HOH 66 366 191 HOH HOH BBB . P 8 HOH 67 367 188 HOH HOH BBB . P 8 HOH 68 368 86 HOH HOH BBB . P 8 HOH 69 369 221 HOH HOH BBB . P 8 HOH 70 370 3 HOH HOH BBB . P 8 HOH 71 371 168 HOH HOH BBB . P 8 HOH 72 372 77 HOH HOH BBB . P 8 HOH 73 373 35 HOH HOH BBB . P 8 HOH 74 374 83 HOH HOH BBB . P 8 HOH 75 375 64 HOH HOH BBB . P 8 HOH 76 376 155 HOH HOH BBB . P 8 HOH 77 377 97 HOH HOH BBB . P 8 HOH 78 378 80 HOH HOH BBB . P 8 HOH 79 379 183 HOH HOH BBB . P 8 HOH 80 380 172 HOH HOH BBB . P 8 HOH 81 381 195 HOH HOH BBB . P 8 HOH 82 382 88 HOH HOH BBB . P 8 HOH 83 383 128 HOH HOH BBB . P 8 HOH 84 384 194 HOH HOH BBB . P 8 HOH 85 385 99 HOH HOH BBB . P 8 HOH 86 386 107 HOH HOH BBB . P 8 HOH 87 387 121 HOH HOH BBB . P 8 HOH 88 388 118 HOH HOH BBB . P 8 HOH 89 389 69 HOH HOH BBB . P 8 HOH 90 390 54 HOH HOH BBB . P 8 HOH 91 391 134 HOH HOH BBB . P 8 HOH 92 392 130 HOH HOH BBB . P 8 HOH 93 393 43 HOH HOH BBB . P 8 HOH 94 394 39 HOH HOH BBB . P 8 HOH 95 395 56 HOH HOH BBB . P 8 HOH 96 396 129 HOH HOH BBB . P 8 HOH 97 397 117 HOH HOH BBB . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8VKD _cell.details ? _cell.formula_units_Z ? _cell.length_a 58.359 _cell.length_a_esd ? _cell.length_b 68.036 _cell.length_b_esd ? _cell.length_c 68.312 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8VKD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8VKD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.18 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'MPEG 2000, ammonium sulfate, sodium cacodylate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 277 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-03-03 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8VKD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.40 _reflns.d_resolution_low 44.411 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 51376 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94.65 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.2 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 27.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.40 _reflns_shell.d_res_low 1.436 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2425 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.873 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -2.185 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] -0.000 _refine.aniso_B[2][2] 0.064 _refine.aniso_B[2][3] -0.000 _refine.aniso_B[3][3] 2.121 _refine.B_iso_max ? _refine.B_iso_mean 15.537 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8VKD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.400 _refine.ls_d_res_low 44.411 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 51376 _refine.ls_number_reflns_R_free 2581 _refine.ls_number_reflns_R_work 48795 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.650 _refine.ls_percent_reflns_R_free 5.024 _refine.ls_R_factor_all 0.168 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2008 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1658 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 2QFK' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.089 _refine.pdbx_overall_ESU_R_Free 0.072 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 3.319 _refine.overall_SU_ML 0.057 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2183 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 153 _refine_hist.number_atoms_solvent 202 _refine_hist.number_atoms_total 2538 _refine_hist.d_res_high 1.400 _refine_hist.d_res_low 44.411 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.015 0.013 2867 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.004 0.015 2596 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.998 1.702 3922 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.662 1.628 6009 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.715 5.000 365 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.398 22.469 162 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 16.673 15.000 509 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 20.611 15.000 21 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.099 0.200 334 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.012 0.020 3488 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 742 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.317 0.200 790 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.203 0.200 2270 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.181 0.200 1305 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.079 0.200 1007 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.184 0.200 169 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.114 0.200 2 ? r_symmetry_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.273 0.200 59 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.271 0.200 154 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.248 0.200 32 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 2.356 1.332 1338 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.353 1.332 1337 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.668 2.015 1736 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 2.668 2.015 1737 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.139 1.674 1529 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.142 1.668 1516 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 3.568 2.380 2183 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 3.563 2.367 2165 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 3.917 16.804 3561 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 3.748 16.566 3523 ? r_lrange_other ? ? 'X-RAY DIFFRACTION' ? 8.484 3.000 5463 ? r_rigid_bond_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.400 1.436 . . 138 2425 65.0343 . . . . 0.295 . . . . . . . . . . . 0.363 'X-RAY DIFFRACTION' 1.436 1.475 . . 169 3046 83.3117 . . . . 0.230 . . . . . . . . . . . 0.301 'X-RAY DIFFRACTION' 1.475 1.518 . . 165 3228 89.9046 . . . . 0.201 . . . . . . . . . . . 0.280 'X-RAY DIFFRACTION' 1.518 1.565 . . 165 3219 93.2231 . . . . 0.197 . . . . . . . . . . . 0.213 'X-RAY DIFFRACTION' 1.565 1.616 . . 170 3225 95.7417 . . . . 0.176 . . . . . . . . . . . 0.204 'X-RAY DIFFRACTION' 1.616 1.673 . . 205 3194 98.8369 . . . . 0.169 . . . . . . . . . . . 0.217 'X-RAY DIFFRACTION' 1.673 1.736 . . 154 3163 99.9699 . . . . 0.160 . . . . . . . . . . . 0.194 'X-RAY DIFFRACTION' 1.736 1.807 . . 146 3031 99.8429 . . . . 0.151 . . . . . . . . . . . 0.197 'X-RAY DIFFRACTION' 1.807 1.887 . . 168 2916 99.9676 . . . . 0.150 . . . . . . . . . . . 0.174 'X-RAY DIFFRACTION' 1.887 1.979 . . 150 2782 99.8978 . . . . 0.144 . . . . . . . . . . . 0.177 'X-RAY DIFFRACTION' 1.979 2.086 . . 130 2686 99.9290 . . . . 0.141 . . . . . . . . . . . 0.182 'X-RAY DIFFRACTION' 2.086 2.212 . . 101 2541 99.8866 . . . . 0.141 . . . . . . . . . . . 0.169 'X-RAY DIFFRACTION' 2.212 2.364 . . 162 2339 99.9600 . . . . 0.133 . . . . . . . . . . . 0.154 'X-RAY DIFFRACTION' 2.364 2.553 . . 111 2230 99.9573 . . . . 0.138 . . . . . . . . . . . 0.176 'X-RAY DIFFRACTION' 2.553 2.796 . . 95 2057 99.9536 . . . . 0.148 . . . . . . . . . . . 0.166 'X-RAY DIFFRACTION' 2.796 3.125 . . 101 1864 99.9491 . . . . 0.152 . . . . . . . . . . . 0.198 'X-RAY DIFFRACTION' 3.125 3.606 . . 84 1668 99.7722 . . . . 0.163 . . . . . . . . . . . 0.196 'X-RAY DIFFRACTION' 3.606 4.410 . . 98 1383 99.7978 . . . . 0.161 . . . . . . . . . . . 0.203 'X-RAY DIFFRACTION' 4.410 6.210 . . 50 1139 99.6647 . . . . 0.217 . . . . . . . . . . . 0.283 'X-RAY DIFFRACTION' 6.210 44.411 . . 19 659 95.2247 . . . . 0.288 . . . . . . . . . . . 0.308 # _struct.entry_id 8VKD _struct.title 'Crystal structure of dehaloperoxidase A in complex with substrate 4-nitrocatechol' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8VKD _struct_keywords.text ;peroxidase, peroxigenase, oxidase, oxigenase, globin, heme cofactor, oxygen binding, hydrogenase co-substrate, halophenol substrates, OXIDOREDUCTASE ; _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 4 ? I N N 3 ? J N N 7 ? K N N 2 ? L N N 5 ? M N N 7 ? N N N 7 ? O N N 8 ? P N N 8 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9NAV8_9ANNE _struct_ref.pdbx_db_accession Q9NAV8 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GFKQDIATIRGDLRTYAQDIFLAFLNKYPDERRYFKNYVGKSDQELKSMAKFGDHTEKVFNLMMEVADRATDCVPLASDA NTLVQMKQHSSLTTGNFEKLFVALVEYMRASGQSFDSQSWDRFGKNLVSALSSAGMK ; _struct_ref.pdbx_align_begin 0 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8VKD AAA 1 ? 137 ? Q9NAV8 2 ? 138 ? 1 137 2 1 8VKD BBB 1 ? 137 ? Q9NAV8 2 ? 138 ? 1 137 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,H,I,J,O 2 1 B,K,L,M,N,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 1 ? ASP A 12 ? GLY AAA 1 ASP AAA 12 1 ? 12 HELX_P HELX_P2 AA2 ASP A 12 ? TYR A 28 ? ASP AAA 12 TYR AAA 28 1 ? 17 HELX_P HELX_P3 AA3 PRO A 29 ? VAL A 39 ? PRO AAA 29 VAL AAA 39 5 ? 11 HELX_P HELX_P4 AA4 SER A 42 ? SER A 48 ? SER AAA 42 SER AAA 48 1 ? 7 HELX_P HELX_P5 AA5 MET A 49 ? ALA A 70 ? MET AAA 49 ALA AAA 70 1 ? 22 HELX_P HELX_P6 AA6 LEU A 76 ? MET A 86 ? LEU AAA 76 MET AAA 86 1 ? 11 HELX_P HELX_P7 AA7 LYS A 87 ? SER A 90 ? LYS AAA 87 SER AAA 90 5 ? 4 HELX_P HELX_P8 AA8 THR A 93 ? SER A 111 ? THR AAA 93 SER AAA 111 1 ? 19 HELX_P HELX_P9 AA9 ASP A 116 ? ALA A 134 ? ASP AAA 116 ALA AAA 134 1 ? 19 HELX_P HELX_P10 AB1 PHE B 2 ? GLY B 11 ? PHE BBB 2 GLY BBB 11 1 ? 10 HELX_P HELX_P11 AB2 ASP B 12 ? TYR B 28 ? ASP BBB 12 TYR BBB 28 1 ? 17 HELX_P HELX_P12 AB3 PRO B 29 ? PHE B 35 ? PRO BBB 29 PHE BBB 35 5 ? 7 HELX_P HELX_P13 AB4 SER B 42 ? SER B 48 ? SER BBB 42 SER BBB 48 1 ? 7 HELX_P HELX_P14 AB5 MET B 49 ? ALA B 70 ? MET BBB 49 ALA BBB 70 1 ? 22 HELX_P HELX_P15 AB6 LEU B 76 ? MET B 86 ? LEU BBB 76 MET BBB 86 1 ? 11 HELX_P HELX_P16 AB7 LYS B 87 ? SER B 90 ? LYS BBB 87 SER BBB 90 5 ? 4 HELX_P HELX_P17 AB8 THR B 93 ? SER B 111 ? THR BBB 93 SER BBB 111 1 ? 19 HELX_P HELX_P18 AB9 ASP B 116 ? ALA B 134 ? ASP BBB 116 ALA BBB 134 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale none ? A HIS 55 ND1 A ? ? 1_555 F 4NC . O8 ? ? AAA HIS 55 AAA 4NC 204 1_555 ? ? ? ? ? ? ? 1.223 ? ? covale2 covale none ? A HIS 55 CE1 A ? ? 1_555 F 4NC . C2 ? ? AAA HIS 55 AAA 4NC 204 1_555 ? ? ? ? ? ? ? 1.067 ? ? covale3 covale none ? A HIS 55 CE1 A ? ? 1_555 F 4NC . C6 ? ? AAA HIS 55 AAA 4NC 204 1_555 ? ? ? ? ? ? ? 1.632 ? ? covale4 covale none ? A HIS 55 NE2 A ? ? 1_555 F 4NC . C1 ? ? AAA HIS 55 AAA 4NC 204 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale5 covale none ? A HIS 55 NE2 A ? ? 1_555 F 4NC . C6 ? ? AAA HIS 55 AAA 4NC 204 1_555 ? ? ? ? ? ? ? 1.474 ? ? covale6 covale none ? B HIS 55 ND1 A ? ? 1_555 L 4NC . C1 ? ? BBB HIS 55 BBB 4NC 202 1_555 ? ? ? ? ? ? ? 1.285 ? ? covale7 covale none ? B HIS 55 ND1 A ? ? 1_555 L 4NC . O8 ? ? BBB HIS 55 BBB 4NC 202 1_555 ? ? ? ? ? ? ? 1.424 ? ? covale8 covale none ? B HIS 55 CE1 A ? ? 1_555 L 4NC . C2 ? ? BBB HIS 55 BBB 4NC 202 1_555 ? ? ? ? ? ? ? 1.404 ? ? covale9 covale none ? B HIS 55 CE1 A ? ? 1_555 L 4NC . C6 ? ? BBB HIS 55 BBB 4NC 202 1_555 ? ? ? ? ? ? ? 1.212 ? ? covale10 covale none ? B HIS 55 NE2 A ? ? 1_555 L 4NC . C1 ? ? BBB HIS 55 BBB 4NC 202 1_555 ? ? ? ? ? ? ? 1.553 ? ? covale11 covale none ? B HIS 55 NE2 A ? ? 1_555 L 4NC . C6 ? ? BBB HIS 55 BBB 4NC 202 1_555 ? ? ? ? ? ? ? 1.496 ? ? metalc1 metalc ? ? A HIS 89 NE2 ? ? ? 1_555 C HEM . FE ? ? AAA HIS 89 AAA HEM 201 1_555 ? ? ? ? ? ? ? 2.133 ? ? metalc2 metalc ? ? C HEM . FE ? ? ? 1_555 O HOH . O ? ? AAA HEM 201 AAA HOH 317 1_555 ? ? ? ? ? ? ? 2.274 ? ? metalc3 metalc ? ? B HIS 89 NE2 ? ? ? 1_555 K HEM . FE ? ? BBB HIS 89 BBB HEM 201 1_555 ? ? ? ? ? ? ? 2.139 ? ? metalc4 metalc ? ? K HEM . FE ? ? ? 1_555 P HOH . O ? ? BBB HEM 201 BBB HOH 326 1_555 ? ? ? ? ? ? ? 2.434 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 89 ? AAA HIS 89 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 NA ? C HEM . ? AAA HEM 201 ? 1_555 96.2 ? 2 NE2 ? A HIS 89 ? AAA HIS 89 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 NB ? C HEM . ? AAA HEM 201 ? 1_555 90.9 ? 3 NA ? C HEM . ? AAA HEM 201 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 NB ? C HEM . ? AAA HEM 201 ? 1_555 88.7 ? 4 NE2 ? A HIS 89 ? AAA HIS 89 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 NC ? C HEM . ? AAA HEM 201 ? 1_555 93.6 ? 5 NA ? C HEM . ? AAA HEM 201 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 NC ? C HEM . ? AAA HEM 201 ? 1_555 169.6 ? 6 NB ? C HEM . ? AAA HEM 201 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 NC ? C HEM . ? AAA HEM 201 ? 1_555 87.5 ? 7 NE2 ? A HIS 89 ? AAA HIS 89 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 ND ? C HEM . ? AAA HEM 201 ? 1_555 96.2 ? 8 NA ? C HEM . ? AAA HEM 201 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 ND ? C HEM . ? AAA HEM 201 ? 1_555 91.1 ? 9 NB ? C HEM . ? AAA HEM 201 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 ND ? C HEM . ? AAA HEM 201 ? 1_555 173.0 ? 10 NC ? C HEM . ? AAA HEM 201 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 ND ? C HEM . ? AAA HEM 201 ? 1_555 91.4 ? 11 NE2 ? A HIS 89 ? AAA HIS 89 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 O ? O HOH . ? AAA HOH 317 ? 1_555 171.4 ? 12 NA ? C HEM . ? AAA HEM 201 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 O ? O HOH . ? AAA HOH 317 ? 1_555 92.0 ? 13 NB ? C HEM . ? AAA HEM 201 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 O ? O HOH . ? AAA HOH 317 ? 1_555 91.9 ? 14 NC ? C HEM . ? AAA HEM 201 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 O ? O HOH . ? AAA HOH 317 ? 1_555 78.4 ? 15 ND ? C HEM . ? AAA HEM 201 ? 1_555 FE ? C HEM . ? AAA HEM 201 ? 1_555 O ? O HOH . ? AAA HOH 317 ? 1_555 81.1 ? 16 NE2 ? B HIS 89 ? BBB HIS 89 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 NA ? K HEM . ? BBB HEM 201 ? 1_555 96.7 ? 17 NE2 ? B HIS 89 ? BBB HIS 89 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 NB ? K HEM . ? BBB HEM 201 ? 1_555 91.1 ? 18 NA ? K HEM . ? BBB HEM 201 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 NB ? K HEM . ? BBB HEM 201 ? 1_555 90.2 ? 19 NE2 ? B HIS 89 ? BBB HIS 89 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 NC ? K HEM . ? BBB HEM 201 ? 1_555 92.7 ? 20 NA ? K HEM . ? BBB HEM 201 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 NC ? K HEM . ? BBB HEM 201 ? 1_555 170.3 ? 21 NB ? K HEM . ? BBB HEM 201 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 NC ? K HEM . ? BBB HEM 201 ? 1_555 87.3 ? 22 NE2 ? B HIS 89 ? BBB HIS 89 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 ND ? K HEM . ? BBB HEM 201 ? 1_555 95.9 ? 23 NA ? K HEM . ? BBB HEM 201 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 ND ? K HEM . ? BBB HEM 201 ? 1_555 87.9 ? 24 NB ? K HEM . ? BBB HEM 201 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 ND ? K HEM . ? BBB HEM 201 ? 1_555 172.9 ? 25 NC ? K HEM . ? BBB HEM 201 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 ND ? K HEM . ? BBB HEM 201 ? 1_555 93.5 ? 26 NE2 ? B HIS 89 ? BBB HIS 89 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 O ? P HOH . ? BBB HOH 326 ? 1_555 165.0 ? 27 NA ? K HEM . ? BBB HEM 201 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 O ? P HOH . ? BBB HOH 326 ? 1_555 94.4 ? 28 NB ? K HEM . ? BBB HEM 201 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 O ? P HOH . ? BBB HOH 326 ? 1_555 98.9 ? 29 NC ? K HEM . ? BBB HEM 201 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 O ? P HOH . ? BBB HOH 326 ? 1_555 76.7 ? 30 ND ? K HEM . ? BBB HEM 201 ? 1_555 FE ? K HEM . ? BBB HEM 201 ? 1_555 O ? P HOH . ? BBB HOH 326 ? 1_555 74.5 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 C5 _pdbx_validate_close_contact.auth_asym_id_1 BBB _pdbx_validate_close_contact.auth_comp_id_1 4NC _pdbx_validate_close_contact.auth_seq_id_1 202 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 BBB _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 326 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.64 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CZ _pdbx_validate_rmsd_bond.auth_asym_id_1 BBB _pdbx_validate_rmsd_bond.auth_comp_id_1 ARG _pdbx_validate_rmsd_bond.auth_seq_id_1 32 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 B _pdbx_validate_rmsd_bond.auth_atom_id_2 NH2 _pdbx_validate_rmsd_bond.auth_asym_id_2 BBB _pdbx_validate_rmsd_bond.auth_comp_id_2 ARG _pdbx_validate_rmsd_bond.auth_seq_id_2 32 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 B _pdbx_validate_rmsd_bond.bond_value 1.405 _pdbx_validate_rmsd_bond.bond_target_value 1.326 _pdbx_validate_rmsd_bond.bond_deviation 0.079 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.013 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE AAA ARG 10 ? B CZ AAA ARG 10 ? B NH1 AAA ARG 10 ? B 123.46 120.30 3.16 0.50 N 2 1 CB BBB ASP 5 ? ? CG BBB ASP 5 ? ? OD2 BBB ASP 5 ? ? 112.67 118.30 -5.63 0.90 N 3 1 CD BBB ARG 32 ? B NE BBB ARG 32 ? B CZ BBB ARG 32 ? B 132.08 123.60 8.48 1.40 N 4 1 NE BBB ARG 32 ? B CZ BBB ARG 32 ? B NH1 BBB ARG 32 ? B 110.06 120.30 -10.24 0.50 N 5 1 NE BBB ARG 32 ? B CZ BBB ARG 32 ? B NH2 BBB ARG 32 ? B 124.90 120.30 4.60 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER AAA 114 ? A -80.70 49.78 2 1 ASP BBB 12 ? ? -152.69 53.59 3 1 ASN BBB 37 ? ? 92.01 14.40 4 1 SER BBB 114 ? A -87.45 40.60 # _pdbx_entry_details.entry_id 8VKD _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id BBB _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 397 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.99 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 4NC C1 C Y N 1 4NC C2 C Y N 2 4NC C3 C Y N 3 4NC C4 C Y N 4 4NC C5 C Y N 5 4NC C6 C Y N 6 4NC O7 O N N 7 4NC O8 O N N 8 4NC N9 N N N 9 4NC O10 O N N 10 4NC O11 O N N 11 4NC H3 H N N 12 4NC H5 H N N 13 4NC H6 H N N 14 4NC HO7 H N N 15 4NC HO8 H N N 16 ALA N N N N 17 ALA CA C N S 18 ALA C C N N 19 ALA O O N N 20 ALA CB C N N 21 ALA OXT O N N 22 ALA H H N N 23 ALA H2 H N N 24 ALA HA H N N 25 ALA HB1 H N N 26 ALA HB2 H N N 27 ALA HB3 H N N 28 ALA HXT H N N 29 ARG N N N N 30 ARG CA C N S 31 ARG C C N N 32 ARG O O N N 33 ARG CB C N N 34 ARG CG C N N 35 ARG CD C N N 36 ARG NE N N N 37 ARG CZ C N N 38 ARG NH1 N N N 39 ARG NH2 N N N 40 ARG OXT O N N 41 ARG H H N N 42 ARG H2 H N N 43 ARG HA H N N 44 ARG HB2 H N N 45 ARG HB3 H N N 46 ARG HG2 H N N 47 ARG HG3 H N N 48 ARG HD2 H N N 49 ARG HD3 H N N 50 ARG HE H N N 51 ARG HH11 H N N 52 ARG HH12 H N N 53 ARG HH21 H N N 54 ARG HH22 H N N 55 ARG HXT H N N 56 ASN N N N N 57 ASN CA C N S 58 ASN C C N N 59 ASN O O N N 60 ASN CB C N N 61 ASN CG C N N 62 ASN OD1 O N N 63 ASN ND2 N N N 64 ASN OXT O N N 65 ASN H H N N 66 ASN H2 H N N 67 ASN HA H N N 68 ASN HB2 H N N 69 ASN HB3 H N N 70 ASN HD21 H N N 71 ASN HD22 H N N 72 ASN HXT H N N 73 ASP N N N N 74 ASP CA C N S 75 ASP C C N N 76 ASP O O N N 77 ASP CB C N N 78 ASP CG C N N 79 ASP OD1 O N N 80 ASP OD2 O N N 81 ASP OXT O N N 82 ASP H H N N 83 ASP H2 H N N 84 ASP HA H N N 85 ASP HB2 H N N 86 ASP HB3 H N N 87 ASP HD2 H N N 88 ASP HXT H N N 89 CYS N N N N 90 CYS CA C N R 91 CYS C C N N 92 CYS O O N N 93 CYS CB C N N 94 CYS SG S N N 95 CYS OXT O N N 96 CYS H H N N 97 CYS H2 H N N 98 CYS HA H N N 99 CYS HB2 H N N 100 CYS HB3 H N N 101 CYS HG H N N 102 CYS HXT H N N 103 DMS S S N N 104 DMS O O N N 105 DMS C1 C N N 106 DMS C2 C N N 107 DMS H11 H N N 108 DMS H12 H N N 109 DMS H13 H N N 110 DMS H21 H N N 111 DMS H22 H N N 112 DMS H23 H N N 113 GLN N N N N 114 GLN CA C N S 115 GLN C C N N 116 GLN O O N N 117 GLN CB C N N 118 GLN CG C N N 119 GLN CD C N N 120 GLN OE1 O N N 121 GLN NE2 N N N 122 GLN OXT O N N 123 GLN H H N N 124 GLN H2 H N N 125 GLN HA H N N 126 GLN HB2 H N N 127 GLN HB3 H N N 128 GLN HG2 H N N 129 GLN HG3 H N N 130 GLN HE21 H N N 131 GLN HE22 H N N 132 GLN HXT H N N 133 GLU N N N N 134 GLU CA C N S 135 GLU C C N N 136 GLU O O N N 137 GLU CB C N N 138 GLU CG C N N 139 GLU CD C N N 140 GLU OE1 O N N 141 GLU OE2 O N N 142 GLU OXT O N N 143 GLU H H N N 144 GLU H2 H N N 145 GLU HA H N N 146 GLU HB2 H N N 147 GLU HB3 H N N 148 GLU HG2 H N N 149 GLU HG3 H N N 150 GLU HE2 H N N 151 GLU HXT H N N 152 GLY N N N N 153 GLY CA C N N 154 GLY C C N N 155 GLY O O N N 156 GLY OXT O N N 157 GLY H H N N 158 GLY H2 H N N 159 GLY HA2 H N N 160 GLY HA3 H N N 161 GLY HXT H N N 162 GOL C1 C N N 163 GOL O1 O N N 164 GOL C2 C N N 165 GOL O2 O N N 166 GOL C3 C N N 167 GOL O3 O N N 168 GOL H11 H N N 169 GOL H12 H N N 170 GOL HO1 H N N 171 GOL H2 H N N 172 GOL HO2 H N N 173 GOL H31 H N N 174 GOL H32 H N N 175 GOL HO3 H N N 176 HEM CHA C N N 177 HEM CHB C N N 178 HEM CHC C N N 179 HEM CHD C N N 180 HEM C1A C Y N 181 HEM C2A C Y N 182 HEM C3A C Y N 183 HEM C4A C Y N 184 HEM CMA C N N 185 HEM CAA C N N 186 HEM CBA C N N 187 HEM CGA C N N 188 HEM O1A O N N 189 HEM O2A O N N 190 HEM C1B C N N 191 HEM C2B C N N 192 HEM C3B C N N 193 HEM C4B C N N 194 HEM CMB C N N 195 HEM CAB C N N 196 HEM CBB C N N 197 HEM C1C C Y N 198 HEM C2C C Y N 199 HEM C3C C Y N 200 HEM C4C C Y N 201 HEM CMC C N N 202 HEM CAC C N N 203 HEM CBC C N N 204 HEM C1D C N N 205 HEM C2D C N N 206 HEM C3D C N N 207 HEM C4D C N N 208 HEM CMD C N N 209 HEM CAD C N N 210 HEM CBD C N N 211 HEM CGD C N N 212 HEM O1D O N N 213 HEM O2D O N N 214 HEM NA N Y N 215 HEM NB N N N 216 HEM NC N Y N 217 HEM ND N N N 218 HEM FE FE N N 219 HEM HHB H N N 220 HEM HHC H N N 221 HEM HHD H N N 222 HEM HMA H N N 223 HEM HMAA H N N 224 HEM HMAB H N N 225 HEM HAA H N N 226 HEM HAAA H N N 227 HEM HBA H N N 228 HEM HBAA H N N 229 HEM HMB H N N 230 HEM HMBA H N N 231 HEM HMBB H N N 232 HEM HAB H N N 233 HEM HBB H N N 234 HEM HBBA H N N 235 HEM HMC H N N 236 HEM HMCA H N N 237 HEM HMCB H N N 238 HEM HAC H N N 239 HEM HBC H N N 240 HEM HBCA H N N 241 HEM HMD H N N 242 HEM HMDA H N N 243 HEM HMDB H N N 244 HEM HAD H N N 245 HEM HADA H N N 246 HEM HBD H N N 247 HEM HBDA H N N 248 HEM H2A H N N 249 HEM H2D H N N 250 HEM HHA H N N 251 HIS N N N N 252 HIS CA C N S 253 HIS C C N N 254 HIS O O N N 255 HIS CB C N N 256 HIS CG C Y N 257 HIS ND1 N Y N 258 HIS CD2 C Y N 259 HIS CE1 C Y N 260 HIS NE2 N Y N 261 HIS OXT O N N 262 HIS H H N N 263 HIS H2 H N N 264 HIS HA H N N 265 HIS HB2 H N N 266 HIS HB3 H N N 267 HIS HD1 H N N 268 HIS HD2 H N N 269 HIS HE1 H N N 270 HIS HE2 H N N 271 HIS HXT H N N 272 HOH O O N N 273 HOH H1 H N N 274 HOH H2 H N N 275 ILE N N N N 276 ILE CA C N S 277 ILE C C N N 278 ILE O O N N 279 ILE CB C N S 280 ILE CG1 C N N 281 ILE CG2 C N N 282 ILE CD1 C N N 283 ILE OXT O N N 284 ILE H H N N 285 ILE H2 H N N 286 ILE HA H N N 287 ILE HB H N N 288 ILE HG12 H N N 289 ILE HG13 H N N 290 ILE HG21 H N N 291 ILE HG22 H N N 292 ILE HG23 H N N 293 ILE HD11 H N N 294 ILE HD12 H N N 295 ILE HD13 H N N 296 ILE HXT H N N 297 LEU N N N N 298 LEU CA C N S 299 LEU C C N N 300 LEU O O N N 301 LEU CB C N N 302 LEU CG C N N 303 LEU CD1 C N N 304 LEU CD2 C N N 305 LEU OXT O N N 306 LEU H H N N 307 LEU H2 H N N 308 LEU HA H N N 309 LEU HB2 H N N 310 LEU HB3 H N N 311 LEU HG H N N 312 LEU HD11 H N N 313 LEU HD12 H N N 314 LEU HD13 H N N 315 LEU HD21 H N N 316 LEU HD22 H N N 317 LEU HD23 H N N 318 LEU HXT H N N 319 LYS N N N N 320 LYS CA C N S 321 LYS C C N N 322 LYS O O N N 323 LYS CB C N N 324 LYS CG C N N 325 LYS CD C N N 326 LYS CE C N N 327 LYS NZ N N N 328 LYS OXT O N N 329 LYS H H N N 330 LYS H2 H N N 331 LYS HA H N N 332 LYS HB2 H N N 333 LYS HB3 H N N 334 LYS HG2 H N N 335 LYS HG3 H N N 336 LYS HD2 H N N 337 LYS HD3 H N N 338 LYS HE2 H N N 339 LYS HE3 H N N 340 LYS HZ1 H N N 341 LYS HZ2 H N N 342 LYS HZ3 H N N 343 LYS HXT H N N 344 MET N N N N 345 MET CA C N S 346 MET C C N N 347 MET O O N N 348 MET CB C N N 349 MET CG C N N 350 MET SD S N N 351 MET CE C N N 352 MET OXT O N N 353 MET H H N N 354 MET H2 H N N 355 MET HA H N N 356 MET HB2 H N N 357 MET HB3 H N N 358 MET HG2 H N N 359 MET HG3 H N N 360 MET HE1 H N N 361 MET HE2 H N N 362 MET HE3 H N N 363 MET HXT H N N 364 PEG C1 C N N 365 PEG O1 O N N 366 PEG C2 C N N 367 PEG O2 O N N 368 PEG C3 C N N 369 PEG C4 C N N 370 PEG O4 O N N 371 PEG H11 H N N 372 PEG H12 H N N 373 PEG HO1 H N N 374 PEG H21 H N N 375 PEG H22 H N N 376 PEG H31 H N N 377 PEG H32 H N N 378 PEG H41 H N N 379 PEG H42 H N N 380 PEG HO4 H N N 381 PHE N N N N 382 PHE CA C N S 383 PHE C C N N 384 PHE O O N N 385 PHE CB C N N 386 PHE CG C Y N 387 PHE CD1 C Y N 388 PHE CD2 C Y N 389 PHE CE1 C Y N 390 PHE CE2 C Y N 391 PHE CZ C Y N 392 PHE OXT O N N 393 PHE H H N N 394 PHE H2 H N N 395 PHE HA H N N 396 PHE HB2 H N N 397 PHE HB3 H N N 398 PHE HD1 H N N 399 PHE HD2 H N N 400 PHE HE1 H N N 401 PHE HE2 H N N 402 PHE HZ H N N 403 PHE HXT H N N 404 PRO N N N N 405 PRO CA C N S 406 PRO C C N N 407 PRO O O N N 408 PRO CB C N N 409 PRO CG C N N 410 PRO CD C N N 411 PRO OXT O N N 412 PRO H H N N 413 PRO HA H N N 414 PRO HB2 H N N 415 PRO HB3 H N N 416 PRO HG2 H N N 417 PRO HG3 H N N 418 PRO HD2 H N N 419 PRO HD3 H N N 420 PRO HXT H N N 421 SER N N N N 422 SER CA C N S 423 SER C C N N 424 SER O O N N 425 SER CB C N N 426 SER OG O N N 427 SER OXT O N N 428 SER H H N N 429 SER H2 H N N 430 SER HA H N N 431 SER HB2 H N N 432 SER HB3 H N N 433 SER HG H N N 434 SER HXT H N N 435 SO4 S S N N 436 SO4 O1 O N N 437 SO4 O2 O N N 438 SO4 O3 O N N 439 SO4 O4 O N N 440 THR N N N N 441 THR CA C N S 442 THR C C N N 443 THR O O N N 444 THR CB C N R 445 THR OG1 O N N 446 THR CG2 C N N 447 THR OXT O N N 448 THR H H N N 449 THR H2 H N N 450 THR HA H N N 451 THR HB H N N 452 THR HG1 H N N 453 THR HG21 H N N 454 THR HG22 H N N 455 THR HG23 H N N 456 THR HXT H N N 457 TRP N N N N 458 TRP CA C N S 459 TRP C C N N 460 TRP O O N N 461 TRP CB C N N 462 TRP CG C Y N 463 TRP CD1 C Y N 464 TRP CD2 C Y N 465 TRP NE1 N Y N 466 TRP CE2 C Y N 467 TRP CE3 C Y N 468 TRP CZ2 C Y N 469 TRP CZ3 C Y N 470 TRP CH2 C Y N 471 TRP OXT O N N 472 TRP H H N N 473 TRP H2 H N N 474 TRP HA H N N 475 TRP HB2 H N N 476 TRP HB3 H N N 477 TRP HD1 H N N 478 TRP HE1 H N N 479 TRP HE3 H N N 480 TRP HZ2 H N N 481 TRP HZ3 H N N 482 TRP HH2 H N N 483 TRP HXT H N N 484 TYR N N N N 485 TYR CA C N S 486 TYR C C N N 487 TYR O O N N 488 TYR CB C N N 489 TYR CG C Y N 490 TYR CD1 C Y N 491 TYR CD2 C Y N 492 TYR CE1 C Y N 493 TYR CE2 C Y N 494 TYR CZ C Y N 495 TYR OH O N N 496 TYR OXT O N N 497 TYR H H N N 498 TYR H2 H N N 499 TYR HA H N N 500 TYR HB2 H N N 501 TYR HB3 H N N 502 TYR HD1 H N N 503 TYR HD2 H N N 504 TYR HE1 H N N 505 TYR HE2 H N N 506 TYR HH H N N 507 TYR HXT H N N 508 VAL N N N N 509 VAL CA C N S 510 VAL C C N N 511 VAL O O N N 512 VAL CB C N N 513 VAL CG1 C N N 514 VAL CG2 C N N 515 VAL OXT O N N 516 VAL H H N N 517 VAL H2 H N N 518 VAL HA H N N 519 VAL HB H N N 520 VAL HG11 H N N 521 VAL HG12 H N N 522 VAL HG13 H N N 523 VAL HG21 H N N 524 VAL HG22 H N N 525 VAL HG23 H N N 526 VAL HXT H N N 527 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4NC C1 C2 doub Y N 1 4NC C1 C6 sing Y N 2 4NC C1 O7 sing N N 3 4NC C2 C3 sing Y N 4 4NC C2 O8 sing N N 5 4NC C3 C4 doub Y N 6 4NC C3 H3 sing N N 7 4NC C4 C5 sing Y N 8 4NC C4 N9 sing N N 9 4NC C5 C6 doub Y N 10 4NC C5 H5 sing N N 11 4NC C6 H6 sing N N 12 4NC O7 HO7 sing N N 13 4NC O8 HO8 sing N N 14 4NC N9 O10 doub N N 15 4NC N9 O11 sing N N 16 ALA N CA sing N N 17 ALA N H sing N N 18 ALA N H2 sing N N 19 ALA CA C sing N N 20 ALA CA CB sing N N 21 ALA CA HA sing N N 22 ALA C O doub N N 23 ALA C OXT sing N N 24 ALA CB HB1 sing N N 25 ALA CB HB2 sing N N 26 ALA CB HB3 sing N N 27 ALA OXT HXT sing N N 28 ARG N CA sing N N 29 ARG N H sing N N 30 ARG N H2 sing N N 31 ARG CA C sing N N 32 ARG CA CB sing N N 33 ARG CA HA sing N N 34 ARG C O doub N N 35 ARG C OXT sing N N 36 ARG CB CG sing N N 37 ARG CB HB2 sing N N 38 ARG CB HB3 sing N N 39 ARG CG CD sing N N 40 ARG CG HG2 sing N N 41 ARG CG HG3 sing N N 42 ARG CD NE sing N N 43 ARG CD HD2 sing N N 44 ARG CD HD3 sing N N 45 ARG NE CZ sing N N 46 ARG NE HE sing N N 47 ARG CZ NH1 sing N N 48 ARG CZ NH2 doub N N 49 ARG NH1 HH11 sing N N 50 ARG NH1 HH12 sing N N 51 ARG NH2 HH21 sing N N 52 ARG NH2 HH22 sing N N 53 ARG OXT HXT sing N N 54 ASN N CA sing N N 55 ASN N H sing N N 56 ASN N H2 sing N N 57 ASN CA C sing N N 58 ASN CA CB sing N N 59 ASN CA HA sing N N 60 ASN C O doub N N 61 ASN C OXT sing N N 62 ASN CB CG sing N N 63 ASN CB HB2 sing N N 64 ASN CB HB3 sing N N 65 ASN CG OD1 doub N N 66 ASN CG ND2 sing N N 67 ASN ND2 HD21 sing N N 68 ASN ND2 HD22 sing N N 69 ASN OXT HXT sing N N 70 ASP N CA sing N N 71 ASP N H sing N N 72 ASP N H2 sing N N 73 ASP CA C sing N N 74 ASP CA CB sing N N 75 ASP CA HA sing N N 76 ASP C O doub N N 77 ASP C OXT sing N N 78 ASP CB CG sing N N 79 ASP CB HB2 sing N N 80 ASP CB HB3 sing N N 81 ASP CG OD1 doub N N 82 ASP CG OD2 sing N N 83 ASP OD2 HD2 sing N N 84 ASP OXT HXT sing N N 85 CYS N CA sing N N 86 CYS N H sing N N 87 CYS N H2 sing N N 88 CYS CA C sing N N 89 CYS CA CB sing N N 90 CYS CA HA sing N N 91 CYS C O doub N N 92 CYS C OXT sing N N 93 CYS CB SG sing N N 94 CYS CB HB2 sing N N 95 CYS CB HB3 sing N N 96 CYS SG HG sing N N 97 CYS OXT HXT sing N N 98 DMS S O doub N N 99 DMS S C1 sing N N 100 DMS S C2 sing N N 101 DMS C1 H11 sing N N 102 DMS C1 H12 sing N N 103 DMS C1 H13 sing N N 104 DMS C2 H21 sing N N 105 DMS C2 H22 sing N N 106 DMS C2 H23 sing N N 107 GLN N CA sing N N 108 GLN N H sing N N 109 GLN N H2 sing N N 110 GLN CA C sing N N 111 GLN CA CB sing N N 112 GLN CA HA sing N N 113 GLN C O doub N N 114 GLN C OXT sing N N 115 GLN CB CG sing N N 116 GLN CB HB2 sing N N 117 GLN CB HB3 sing N N 118 GLN CG CD sing N N 119 GLN CG HG2 sing N N 120 GLN CG HG3 sing N N 121 GLN CD OE1 doub N N 122 GLN CD NE2 sing N N 123 GLN NE2 HE21 sing N N 124 GLN NE2 HE22 sing N N 125 GLN OXT HXT sing N N 126 GLU N CA sing N N 127 GLU N H sing N N 128 GLU N H2 sing N N 129 GLU CA C sing N N 130 GLU CA CB sing N N 131 GLU CA HA sing N N 132 GLU C O doub N N 133 GLU C OXT sing N N 134 GLU CB CG sing N N 135 GLU CB HB2 sing N N 136 GLU CB HB3 sing N N 137 GLU CG CD sing N N 138 GLU CG HG2 sing N N 139 GLU CG HG3 sing N N 140 GLU CD OE1 doub N N 141 GLU CD OE2 sing N N 142 GLU OE2 HE2 sing N N 143 GLU OXT HXT sing N N 144 GLY N CA sing N N 145 GLY N H sing N N 146 GLY N H2 sing N N 147 GLY CA C sing N N 148 GLY CA HA2 sing N N 149 GLY CA HA3 sing N N 150 GLY C O doub N N 151 GLY C OXT sing N N 152 GLY OXT HXT sing N N 153 GOL C1 O1 sing N N 154 GOL C1 C2 sing N N 155 GOL C1 H11 sing N N 156 GOL C1 H12 sing N N 157 GOL O1 HO1 sing N N 158 GOL C2 O2 sing N N 159 GOL C2 C3 sing N N 160 GOL C2 H2 sing N N 161 GOL O2 HO2 sing N N 162 GOL C3 O3 sing N N 163 GOL C3 H31 sing N N 164 GOL C3 H32 sing N N 165 GOL O3 HO3 sing N N 166 HEM CHA C1A sing N N 167 HEM CHA C4D doub N N 168 HEM CHA HHA sing N N 169 HEM CHB C4A sing N N 170 HEM CHB C1B doub N N 171 HEM CHB HHB sing N N 172 HEM CHC C4B sing N N 173 HEM CHC C1C doub N N 174 HEM CHC HHC sing N N 175 HEM CHD C4C doub N N 176 HEM CHD C1D sing N N 177 HEM CHD HHD sing N N 178 HEM C1A C2A doub Y N 179 HEM C1A NA sing Y N 180 HEM C2A C3A sing Y N 181 HEM C2A CAA sing N N 182 HEM C3A C4A doub Y N 183 HEM C3A CMA sing N N 184 HEM C4A NA sing Y N 185 HEM CMA HMA sing N N 186 HEM CMA HMAA sing N N 187 HEM CMA HMAB sing N N 188 HEM CAA CBA sing N N 189 HEM CAA HAA sing N N 190 HEM CAA HAAA sing N N 191 HEM CBA CGA sing N N 192 HEM CBA HBA sing N N 193 HEM CBA HBAA sing N N 194 HEM CGA O1A doub N N 195 HEM CGA O2A sing N N 196 HEM C1B C2B sing N N 197 HEM C1B NB sing N N 198 HEM C2B C3B doub N N 199 HEM C2B CMB sing N N 200 HEM C3B C4B sing N N 201 HEM C3B CAB sing N N 202 HEM C4B NB doub N N 203 HEM CMB HMB sing N N 204 HEM CMB HMBA sing N N 205 HEM CMB HMBB sing N N 206 HEM CAB CBB doub N N 207 HEM CAB HAB sing N N 208 HEM CBB HBB sing N N 209 HEM CBB HBBA sing N N 210 HEM C1C C2C sing Y N 211 HEM C1C NC sing Y N 212 HEM C2C C3C doub Y N 213 HEM C2C CMC sing N N 214 HEM C3C C4C sing Y N 215 HEM C3C CAC sing N N 216 HEM C4C NC sing Y N 217 HEM CMC HMC sing N N 218 HEM CMC HMCA sing N N 219 HEM CMC HMCB sing N N 220 HEM CAC CBC doub N N 221 HEM CAC HAC sing N N 222 HEM CBC HBC sing N N 223 HEM CBC HBCA sing N N 224 HEM C1D C2D sing N N 225 HEM C1D ND doub N N 226 HEM C2D C3D doub N N 227 HEM C2D CMD sing N N 228 HEM C3D C4D sing N N 229 HEM C3D CAD sing N N 230 HEM C4D ND sing N N 231 HEM CMD HMD sing N N 232 HEM CMD HMDA sing N N 233 HEM CMD HMDB sing N N 234 HEM CAD CBD sing N N 235 HEM CAD HAD sing N N 236 HEM CAD HADA sing N N 237 HEM CBD CGD sing N N 238 HEM CBD HBD sing N N 239 HEM CBD HBDA sing N N 240 HEM CGD O1D doub N N 241 HEM CGD O2D sing N N 242 HEM O2A H2A sing N N 243 HEM O2D H2D sing N N 244 HEM FE NA sing N N 245 HEM FE NB sing N N 246 HEM FE NC sing N N 247 HEM FE ND sing N N 248 HIS N CA sing N N 249 HIS N H sing N N 250 HIS N H2 sing N N 251 HIS CA C sing N N 252 HIS CA CB sing N N 253 HIS CA HA sing N N 254 HIS C O doub N N 255 HIS C OXT sing N N 256 HIS CB CG sing N N 257 HIS CB HB2 sing N N 258 HIS CB HB3 sing N N 259 HIS CG ND1 sing Y N 260 HIS CG CD2 doub Y N 261 HIS ND1 CE1 doub Y N 262 HIS ND1 HD1 sing N N 263 HIS CD2 NE2 sing Y N 264 HIS CD2 HD2 sing N N 265 HIS CE1 NE2 sing Y N 266 HIS CE1 HE1 sing N N 267 HIS NE2 HE2 sing N N 268 HIS OXT HXT sing N N 269 HOH O H1 sing N N 270 HOH O H2 sing N N 271 ILE N CA sing N N 272 ILE N H sing N N 273 ILE N H2 sing N N 274 ILE CA C sing N N 275 ILE CA CB sing N N 276 ILE CA HA sing N N 277 ILE C O doub N N 278 ILE C OXT sing N N 279 ILE CB CG1 sing N N 280 ILE CB CG2 sing N N 281 ILE CB HB sing N N 282 ILE CG1 CD1 sing N N 283 ILE CG1 HG12 sing N N 284 ILE CG1 HG13 sing N N 285 ILE CG2 HG21 sing N N 286 ILE CG2 HG22 sing N N 287 ILE CG2 HG23 sing N N 288 ILE CD1 HD11 sing N N 289 ILE CD1 HD12 sing N N 290 ILE CD1 HD13 sing N N 291 ILE OXT HXT sing N N 292 LEU N CA sing N N 293 LEU N H sing N N 294 LEU N H2 sing N N 295 LEU CA C sing N N 296 LEU CA CB sing N N 297 LEU CA HA sing N N 298 LEU C O doub N N 299 LEU C OXT sing N N 300 LEU CB CG sing N N 301 LEU CB HB2 sing N N 302 LEU CB HB3 sing N N 303 LEU CG CD1 sing N N 304 LEU CG CD2 sing N N 305 LEU CG HG sing N N 306 LEU CD1 HD11 sing N N 307 LEU CD1 HD12 sing N N 308 LEU CD1 HD13 sing N N 309 LEU CD2 HD21 sing N N 310 LEU CD2 HD22 sing N N 311 LEU CD2 HD23 sing N N 312 LEU OXT HXT sing N N 313 LYS N CA sing N N 314 LYS N H sing N N 315 LYS N H2 sing N N 316 LYS CA C sing N N 317 LYS CA CB sing N N 318 LYS CA HA sing N N 319 LYS C O doub N N 320 LYS C OXT sing N N 321 LYS CB CG sing N N 322 LYS CB HB2 sing N N 323 LYS CB HB3 sing N N 324 LYS CG CD sing N N 325 LYS CG HG2 sing N N 326 LYS CG HG3 sing N N 327 LYS CD CE sing N N 328 LYS CD HD2 sing N N 329 LYS CD HD3 sing N N 330 LYS CE NZ sing N N 331 LYS CE HE2 sing N N 332 LYS CE HE3 sing N N 333 LYS NZ HZ1 sing N N 334 LYS NZ HZ2 sing N N 335 LYS NZ HZ3 sing N N 336 LYS OXT HXT sing N N 337 MET N CA sing N N 338 MET N H sing N N 339 MET N H2 sing N N 340 MET CA C sing N N 341 MET CA CB sing N N 342 MET CA HA sing N N 343 MET C O doub N N 344 MET C OXT sing N N 345 MET CB CG sing N N 346 MET CB HB2 sing N N 347 MET CB HB3 sing N N 348 MET CG SD sing N N 349 MET CG HG2 sing N N 350 MET CG HG3 sing N N 351 MET SD CE sing N N 352 MET CE HE1 sing N N 353 MET CE HE2 sing N N 354 MET CE HE3 sing N N 355 MET OXT HXT sing N N 356 PEG C1 O1 sing N N 357 PEG C1 C2 sing N N 358 PEG C1 H11 sing N N 359 PEG C1 H12 sing N N 360 PEG O1 HO1 sing N N 361 PEG C2 O2 sing N N 362 PEG C2 H21 sing N N 363 PEG C2 H22 sing N N 364 PEG O2 C3 sing N N 365 PEG C3 C4 sing N N 366 PEG C3 H31 sing N N 367 PEG C3 H32 sing N N 368 PEG C4 O4 sing N N 369 PEG C4 H41 sing N N 370 PEG C4 H42 sing N N 371 PEG O4 HO4 sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 PRO N CA sing N N 396 PRO N CD sing N N 397 PRO N H sing N N 398 PRO CA C sing N N 399 PRO CA CB sing N N 400 PRO CA HA sing N N 401 PRO C O doub N N 402 PRO C OXT sing N N 403 PRO CB CG sing N N 404 PRO CB HB2 sing N N 405 PRO CB HB3 sing N N 406 PRO CG CD sing N N 407 PRO CG HG2 sing N N 408 PRO CG HG3 sing N N 409 PRO CD HD2 sing N N 410 PRO CD HD3 sing N N 411 PRO OXT HXT sing N N 412 SER N CA sing N N 413 SER N H sing N N 414 SER N H2 sing N N 415 SER CA C sing N N 416 SER CA CB sing N N 417 SER CA HA sing N N 418 SER C O doub N N 419 SER C OXT sing N N 420 SER CB OG sing N N 421 SER CB HB2 sing N N 422 SER CB HB3 sing N N 423 SER OG HG sing N N 424 SER OXT HXT sing N N 425 SO4 S O1 doub N N 426 SO4 S O2 doub N N 427 SO4 S O3 sing N N 428 SO4 S O4 sing N N 429 THR N CA sing N N 430 THR N H sing N N 431 THR N H2 sing N N 432 THR CA C sing N N 433 THR CA CB sing N N 434 THR CA HA sing N N 435 THR C O doub N N 436 THR C OXT sing N N 437 THR CB OG1 sing N N 438 THR CB CG2 sing N N 439 THR CB HB sing N N 440 THR OG1 HG1 sing N N 441 THR CG2 HG21 sing N N 442 THR CG2 HG22 sing N N 443 THR CG2 HG23 sing N N 444 THR OXT HXT sing N N 445 TRP N CA sing N N 446 TRP N H sing N N 447 TRP N H2 sing N N 448 TRP CA C sing N N 449 TRP CA CB sing N N 450 TRP CA HA sing N N 451 TRP C O doub N N 452 TRP C OXT sing N N 453 TRP CB CG sing N N 454 TRP CB HB2 sing N N 455 TRP CB HB3 sing N N 456 TRP CG CD1 doub Y N 457 TRP CG CD2 sing Y N 458 TRP CD1 NE1 sing Y N 459 TRP CD1 HD1 sing N N 460 TRP CD2 CE2 doub Y N 461 TRP CD2 CE3 sing Y N 462 TRP NE1 CE2 sing Y N 463 TRP NE1 HE1 sing N N 464 TRP CE2 CZ2 sing Y N 465 TRP CE3 CZ3 doub Y N 466 TRP CE3 HE3 sing N N 467 TRP CZ2 CH2 doub Y N 468 TRP CZ2 HZ2 sing N N 469 TRP CZ3 CH2 sing Y N 470 TRP CZ3 HZ3 sing N N 471 TRP CH2 HH2 sing N N 472 TRP OXT HXT sing N N 473 TYR N CA sing N N 474 TYR N H sing N N 475 TYR N H2 sing N N 476 TYR CA C sing N N 477 TYR CA CB sing N N 478 TYR CA HA sing N N 479 TYR C O doub N N 480 TYR C OXT sing N N 481 TYR CB CG sing N N 482 TYR CB HB2 sing N N 483 TYR CB HB3 sing N N 484 TYR CG CD1 doub Y N 485 TYR CG CD2 sing Y N 486 TYR CD1 CE1 sing Y N 487 TYR CD1 HD1 sing N N 488 TYR CD2 CE2 doub Y N 489 TYR CD2 HD2 sing N N 490 TYR CE1 CZ doub Y N 491 TYR CE1 HE1 sing N N 492 TYR CE2 CZ sing Y N 493 TYR CE2 HE2 sing N N 494 TYR CZ OH sing N N 495 TYR OH HH sing N N 496 TYR OXT HXT sing N N 497 VAL N CA sing N N 498 VAL N H sing N N 499 VAL N H2 sing N N 500 VAL CA C sing N N 501 VAL CA CB sing N N 502 VAL CA HA sing N N 503 VAL C O doub N N 504 VAL C OXT sing N N 505 VAL CB CG1 sing N N 506 VAL CB CG2 sing N N 507 VAL CB HB sing N N 508 VAL CG1 HG11 sing N N 509 VAL CG1 HG12 sing N N 510 VAL CG1 HG13 sing N N 511 VAL CG2 HG21 sing N N 512 VAL CG2 HG22 sing N N 513 VAL CG2 HG23 sing N N 514 VAL OXT HXT sing N N 515 # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id HEM _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id HEM _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2QFK _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 8VKD _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.017135 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014698 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014639 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 FE 26 26 11.774 4.761 7.360 0.307 3.524 15.354 2.305 76.881 1.037 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 0.867 # loop_