data_8VKN # _entry.id 8VKN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8VKN pdb_00008vkn 10.2210/pdb8vkn/pdb WWPDB D_1000280117 ? ? EMDB EMD-43323 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8VKN _pdbx_database_status.recvd_initial_deposition_date 2024-01-09 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of SARS-CoV-2 XBB.1.5 spike protein in complex with mouse ACE2 (focused refinement of RBD and mouse ACE2)' _pdbx_database_related.db_id EMD-43323 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email sriram.subramaniam@ubc.ca _pdbx_contact_author.name_first Sriram _pdbx_contact_author.name_last Subramaniam _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4231-4115 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhu, X.' 1 ? 'Mannar, D.' 2 ? 'Saville, J.' 3 ? 'Poloni, C.' 4 ? 'Bezeruk, A.' 5 ? 'Tidey, K.' 6 ? 'Ahmed, S.' 7 ? 'Tuttle, K.' 8 ? 'Vahdatihassani, F.' 9 ? 'Cholak, S.' 10 ? 'Cook, L.' 11 ? 'Steiner, T.S.' 12 ? 'Subramaniam, S.' 13 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'SARS-CoV-2 XBB.1.5 Spike Protein: Altered Receptor Binding, Antibody Evasion, and Retention of T Cell Recognition' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mannar, D.' 1 ? primary 'Saville, J.' 2 ? primary 'Poloni, C.' 3 ? primary 'Zhu, X.' 4 ? primary 'Bezeruk, A.' 5 ? primary 'Tidey, K.' 6 ? primary 'Ahmed, S.' 7 ? primary 'Tuttle, K.' 8 ? primary 'Vahdatihassani, F.' 9 ? primary 'Cholak, S.' 10 ? primary 'Cook, L.' 11 ? primary 'Steiner, T.S.' 12 ? primary 'Subramaniam, S.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike protein S1' 22580.527 1 ? ? ? 'XBB.1.5 RBD' 2 polymer man 'Angiotensin-converting enzyme 2' 71795.523 1 3.4.17.23,3.4.17.- ? ? ? 3 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 4 branched man 'beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ? ? ? ? 5 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'ACE-related carboxypeptidase' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;PNITNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQ IAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGPNCY SPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKS ; ;PNITNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQ IAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGPNCY SPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKS ; A ? 2 'polypeptide(L)' no no ;MSSSSWLLLSLVAVTTAQSLTEENAKTFLNNFNQEAEDLSYQSSLASWNYNTNITEENAQKMSEAAAKWSAFYEEQSKTA QSFSLQEIQTPIIKRQLQALQQSGSSALSADKNKQLNTILNTMSTIYSTGKVCNPKNPQECLLLEPGLDEIMATSTDYNS RLWAWEGWRAEVGKQLRPLYEEYVVLKNEMARANNYNDYGDYWRGDYEAEGADGYNYNRNQLIEDVERTFAEIKPLYEHL HAYVRRKLMDTYPSYISPTGCLPAHLLGDMWGRFWTNLYPLTVPFAQKPNIDVTDAMMNQGWDAERIFQEAEKFFVSVGL PHMTQGFWANSMLTEPADGRKVVCHPTAWDLGHGDFRIKMCTKVTMDNFLTAHHEMGHIQYDMAYARQPFLLRNGANEGF HEAVGEIMSLSAATPKHLKSIGLLPSDFQEDSETEINFLLKQALTIVGTLPFTYMLEKWRWMVFRGEIPKEQWMKKWWEM KREIVGVVEPLPHDETYCDPASLFHVSNDYSFIRYYTRTIYQFQFQEALCQAAKYNGSLHKCDISNSTEAGQKLLKMLSL GNSEPWTKALENVVGARNMDVKPLLNYFQPLFDWLKEQNRNSFVGWNTEWSPYADHHHHHH ; ;MSSSSWLLLSLVAVTTAQSLTEENAKTFLNNFNQEAEDLSYQSSLASWNYNTNITEENAQKMSEAAAKWSAFYEEQSKTA QSFSLQEIQTPIIKRQLQALQQSGSSALSADKNKQLNTILNTMSTIYSTGKVCNPKNPQECLLLEPGLDEIMATSTDYNS RLWAWEGWRAEVGKQLRPLYEEYVVLKNEMARANNYNDYGDYWRGDYEAEGADGYNYNRNQLIEDVERTFAEIKPLYEHL HAYVRRKLMDTYPSYISPTGCLPAHLLGDMWGRFWTNLYPLTVPFAQKPNIDVTDAMMNQGWDAERIFQEAEKFFVSVGL PHMTQGFWANSMLTEPADGRKVVCHPTAWDLGHGDFRIKMCTKVTMDNFLTAHHEMGHIQYDMAYARQPFLLRNGANEGF HEAVGEIMSLSAATPKHLKSIGLLPSDFQEDSETEINFLLKQALTIVGTLPFTYMLEKWRWMVFRGEIPKEQWMKKWWEM KREIVGVVEPLPHDETYCDPASLFHVSNDYSFIRYYTRTIYQFQFQEALCQAAKYNGSLHKCDISNSTEAGQKLLKMLSL GNSEPWTKALENVVGARNMDVKPLLNYFQPLFDWLKEQNRNSFVGWNTEWSPYADHHHHHH ; D ? # _pdbx_entity_nonpoly.entity_id 5 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 ASN n 1 3 ILE n 1 4 THR n 1 5 ASN n 1 6 LEU n 1 7 CYS n 1 8 PRO n 1 9 PHE n 1 10 HIS n 1 11 GLU n 1 12 VAL n 1 13 PHE n 1 14 ASN n 1 15 ALA n 1 16 THR n 1 17 THR n 1 18 PHE n 1 19 ALA n 1 20 SER n 1 21 VAL n 1 22 TYR n 1 23 ALA n 1 24 TRP n 1 25 ASN n 1 26 ARG n 1 27 LYS n 1 28 ARG n 1 29 ILE n 1 30 SER n 1 31 ASN n 1 32 CYS n 1 33 VAL n 1 34 ALA n 1 35 ASP n 1 36 TYR n 1 37 SER n 1 38 VAL n 1 39 ILE n 1 40 TYR n 1 41 ASN n 1 42 PHE n 1 43 ALA n 1 44 PRO n 1 45 PHE n 1 46 PHE n 1 47 ALA n 1 48 PHE n 1 49 LYS n 1 50 CYS n 1 51 TYR n 1 52 GLY n 1 53 VAL n 1 54 SER n 1 55 PRO n 1 56 THR n 1 57 LYS n 1 58 LEU n 1 59 ASN n 1 60 ASP n 1 61 LEU n 1 62 CYS n 1 63 PHE n 1 64 THR n 1 65 ASN n 1 66 VAL n 1 67 TYR n 1 68 ALA n 1 69 ASP n 1 70 SER n 1 71 PHE n 1 72 VAL n 1 73 ILE n 1 74 ARG n 1 75 GLY n 1 76 ASN n 1 77 GLU n 1 78 VAL n 1 79 SER n 1 80 GLN n 1 81 ILE n 1 82 ALA n 1 83 PRO n 1 84 GLY n 1 85 GLN n 1 86 THR n 1 87 GLY n 1 88 ASN n 1 89 ILE n 1 90 ALA n 1 91 ASP n 1 92 TYR n 1 93 ASN n 1 94 TYR n 1 95 LYS n 1 96 LEU n 1 97 PRO n 1 98 ASP n 1 99 ASP n 1 100 PHE n 1 101 THR n 1 102 GLY n 1 103 CYS n 1 104 VAL n 1 105 ILE n 1 106 ALA n 1 107 TRP n 1 108 ASN n 1 109 SER n 1 110 ASN n 1 111 LYS n 1 112 LEU n 1 113 ASP n 1 114 SER n 1 115 LYS n 1 116 PRO n 1 117 SER n 1 118 GLY n 1 119 ASN n 1 120 TYR n 1 121 ASN n 1 122 TYR n 1 123 LEU n 1 124 TYR n 1 125 ARG n 1 126 LEU n 1 127 PHE n 1 128 ARG n 1 129 LYS n 1 130 SER n 1 131 LYS n 1 132 LEU n 1 133 LYS n 1 134 PRO n 1 135 PHE n 1 136 GLU n 1 137 ARG n 1 138 ASP n 1 139 ILE n 1 140 SER n 1 141 THR n 1 142 GLU n 1 143 ILE n 1 144 TYR n 1 145 GLN n 1 146 ALA n 1 147 GLY n 1 148 ASN n 1 149 LYS n 1 150 PRO n 1 151 CYS n 1 152 ASN n 1 153 GLY n 1 154 VAL n 1 155 ALA n 1 156 GLY n 1 157 PRO n 1 158 ASN n 1 159 CYS n 1 160 TYR n 1 161 SER n 1 162 PRO n 1 163 LEU n 1 164 GLN n 1 165 SER n 1 166 TYR n 1 167 GLY n 1 168 PHE n 1 169 ARG n 1 170 PRO n 1 171 THR n 1 172 TYR n 1 173 GLY n 1 174 VAL n 1 175 GLY n 1 176 HIS n 1 177 GLN n 1 178 PRO n 1 179 TYR n 1 180 ARG n 1 181 VAL n 1 182 VAL n 1 183 VAL n 1 184 LEU n 1 185 SER n 1 186 PHE n 1 187 GLU n 1 188 LEU n 1 189 LEU n 1 190 HIS n 1 191 ALA n 1 192 PRO n 1 193 ALA n 1 194 THR n 1 195 VAL n 1 196 CYS n 1 197 GLY n 1 198 PRO n 1 199 LYS n 1 200 LYS n 1 201 SER n 2 1 MET n 2 2 SER n 2 3 SER n 2 4 SER n 2 5 SER n 2 6 TRP n 2 7 LEU n 2 8 LEU n 2 9 LEU n 2 10 SER n 2 11 LEU n 2 12 VAL n 2 13 ALA n 2 14 VAL n 2 15 THR n 2 16 THR n 2 17 ALA n 2 18 GLN n 2 19 SER n 2 20 LEU n 2 21 THR n 2 22 GLU n 2 23 GLU n 2 24 ASN n 2 25 ALA n 2 26 LYS n 2 27 THR n 2 28 PHE n 2 29 LEU n 2 30 ASN n 2 31 ASN n 2 32 PHE n 2 33 ASN n 2 34 GLN n 2 35 GLU n 2 36 ALA n 2 37 GLU n 2 38 ASP n 2 39 LEU n 2 40 SER n 2 41 TYR n 2 42 GLN n 2 43 SER n 2 44 SER n 2 45 LEU n 2 46 ALA n 2 47 SER n 2 48 TRP n 2 49 ASN n 2 50 TYR n 2 51 ASN n 2 52 THR n 2 53 ASN n 2 54 ILE n 2 55 THR n 2 56 GLU n 2 57 GLU n 2 58 ASN n 2 59 ALA n 2 60 GLN n 2 61 LYS n 2 62 MET n 2 63 SER n 2 64 GLU n 2 65 ALA n 2 66 ALA n 2 67 ALA n 2 68 LYS n 2 69 TRP n 2 70 SER n 2 71 ALA n 2 72 PHE n 2 73 TYR n 2 74 GLU n 2 75 GLU n 2 76 GLN n 2 77 SER n 2 78 LYS n 2 79 THR n 2 80 ALA n 2 81 GLN n 2 82 SER n 2 83 PHE n 2 84 SER n 2 85 LEU n 2 86 GLN n 2 87 GLU n 2 88 ILE n 2 89 GLN n 2 90 THR n 2 91 PRO n 2 92 ILE n 2 93 ILE n 2 94 LYS n 2 95 ARG n 2 96 GLN n 2 97 LEU n 2 98 GLN n 2 99 ALA n 2 100 LEU n 2 101 GLN n 2 102 GLN n 2 103 SER n 2 104 GLY n 2 105 SER n 2 106 SER n 2 107 ALA n 2 108 LEU n 2 109 SER n 2 110 ALA n 2 111 ASP n 2 112 LYS n 2 113 ASN n 2 114 LYS n 2 115 GLN n 2 116 LEU n 2 117 ASN n 2 118 THR n 2 119 ILE n 2 120 LEU n 2 121 ASN n 2 122 THR n 2 123 MET n 2 124 SER n 2 125 THR n 2 126 ILE n 2 127 TYR n 2 128 SER n 2 129 THR n 2 130 GLY n 2 131 LYS n 2 132 VAL n 2 133 CYS n 2 134 ASN n 2 135 PRO n 2 136 LYS n 2 137 ASN n 2 138 PRO n 2 139 GLN n 2 140 GLU n 2 141 CYS n 2 142 LEU n 2 143 LEU n 2 144 LEU n 2 145 GLU n 2 146 PRO n 2 147 GLY n 2 148 LEU n 2 149 ASP n 2 150 GLU n 2 151 ILE n 2 152 MET n 2 153 ALA n 2 154 THR n 2 155 SER n 2 156 THR n 2 157 ASP n 2 158 TYR n 2 159 ASN n 2 160 SER n 2 161 ARG n 2 162 LEU n 2 163 TRP n 2 164 ALA n 2 165 TRP n 2 166 GLU n 2 167 GLY n 2 168 TRP n 2 169 ARG n 2 170 ALA n 2 171 GLU n 2 172 VAL n 2 173 GLY n 2 174 LYS n 2 175 GLN n 2 176 LEU n 2 177 ARG n 2 178 PRO n 2 179 LEU n 2 180 TYR n 2 181 GLU n 2 182 GLU n 2 183 TYR n 2 184 VAL n 2 185 VAL n 2 186 LEU n 2 187 LYS n 2 188 ASN n 2 189 GLU n 2 190 MET n 2 191 ALA n 2 192 ARG n 2 193 ALA n 2 194 ASN n 2 195 ASN n 2 196 TYR n 2 197 ASN n 2 198 ASP n 2 199 TYR n 2 200 GLY n 2 201 ASP n 2 202 TYR n 2 203 TRP n 2 204 ARG n 2 205 GLY n 2 206 ASP n 2 207 TYR n 2 208 GLU n 2 209 ALA n 2 210 GLU n 2 211 GLY n 2 212 ALA n 2 213 ASP n 2 214 GLY n 2 215 TYR n 2 216 ASN n 2 217 TYR n 2 218 ASN n 2 219 ARG n 2 220 ASN n 2 221 GLN n 2 222 LEU n 2 223 ILE n 2 224 GLU n 2 225 ASP n 2 226 VAL n 2 227 GLU n 2 228 ARG n 2 229 THR n 2 230 PHE n 2 231 ALA n 2 232 GLU n 2 233 ILE n 2 234 LYS n 2 235 PRO n 2 236 LEU n 2 237 TYR n 2 238 GLU n 2 239 HIS n 2 240 LEU n 2 241 HIS n 2 242 ALA n 2 243 TYR n 2 244 VAL n 2 245 ARG n 2 246 ARG n 2 247 LYS n 2 248 LEU n 2 249 MET n 2 250 ASP n 2 251 THR n 2 252 TYR n 2 253 PRO n 2 254 SER n 2 255 TYR n 2 256 ILE n 2 257 SER n 2 258 PRO n 2 259 THR n 2 260 GLY n 2 261 CYS n 2 262 LEU n 2 263 PRO n 2 264 ALA n 2 265 HIS n 2 266 LEU n 2 267 LEU n 2 268 GLY n 2 269 ASP n 2 270 MET n 2 271 TRP n 2 272 GLY n 2 273 ARG n 2 274 PHE n 2 275 TRP n 2 276 THR n 2 277 ASN n 2 278 LEU n 2 279 TYR n 2 280 PRO n 2 281 LEU n 2 282 THR n 2 283 VAL n 2 284 PRO n 2 285 PHE n 2 286 ALA n 2 287 GLN n 2 288 LYS n 2 289 PRO n 2 290 ASN n 2 291 ILE n 2 292 ASP n 2 293 VAL n 2 294 THR n 2 295 ASP n 2 296 ALA n 2 297 MET n 2 298 MET n 2 299 ASN n 2 300 GLN n 2 301 GLY n 2 302 TRP n 2 303 ASP n 2 304 ALA n 2 305 GLU n 2 306 ARG n 2 307 ILE n 2 308 PHE n 2 309 GLN n 2 310 GLU n 2 311 ALA n 2 312 GLU n 2 313 LYS n 2 314 PHE n 2 315 PHE n 2 316 VAL n 2 317 SER n 2 318 VAL n 2 319 GLY n 2 320 LEU n 2 321 PRO n 2 322 HIS n 2 323 MET n 2 324 THR n 2 325 GLN n 2 326 GLY n 2 327 PHE n 2 328 TRP n 2 329 ALA n 2 330 ASN n 2 331 SER n 2 332 MET n 2 333 LEU n 2 334 THR n 2 335 GLU n 2 336 PRO n 2 337 ALA n 2 338 ASP n 2 339 GLY n 2 340 ARG n 2 341 LYS n 2 342 VAL n 2 343 VAL n 2 344 CYS n 2 345 HIS n 2 346 PRO n 2 347 THR n 2 348 ALA n 2 349 TRP n 2 350 ASP n 2 351 LEU n 2 352 GLY n 2 353 HIS n 2 354 GLY n 2 355 ASP n 2 356 PHE n 2 357 ARG n 2 358 ILE n 2 359 LYS n 2 360 MET n 2 361 CYS n 2 362 THR n 2 363 LYS n 2 364 VAL n 2 365 THR n 2 366 MET n 2 367 ASP n 2 368 ASN n 2 369 PHE n 2 370 LEU n 2 371 THR n 2 372 ALA n 2 373 HIS n 2 374 HIS n 2 375 GLU n 2 376 MET n 2 377 GLY n 2 378 HIS n 2 379 ILE n 2 380 GLN n 2 381 TYR n 2 382 ASP n 2 383 MET n 2 384 ALA n 2 385 TYR n 2 386 ALA n 2 387 ARG n 2 388 GLN n 2 389 PRO n 2 390 PHE n 2 391 LEU n 2 392 LEU n 2 393 ARG n 2 394 ASN n 2 395 GLY n 2 396 ALA n 2 397 ASN n 2 398 GLU n 2 399 GLY n 2 400 PHE n 2 401 HIS n 2 402 GLU n 2 403 ALA n 2 404 VAL n 2 405 GLY n 2 406 GLU n 2 407 ILE n 2 408 MET n 2 409 SER n 2 410 LEU n 2 411 SER n 2 412 ALA n 2 413 ALA n 2 414 THR n 2 415 PRO n 2 416 LYS n 2 417 HIS n 2 418 LEU n 2 419 LYS n 2 420 SER n 2 421 ILE n 2 422 GLY n 2 423 LEU n 2 424 LEU n 2 425 PRO n 2 426 SER n 2 427 ASP n 2 428 PHE n 2 429 GLN n 2 430 GLU n 2 431 ASP n 2 432 SER n 2 433 GLU n 2 434 THR n 2 435 GLU n 2 436 ILE n 2 437 ASN n 2 438 PHE n 2 439 LEU n 2 440 LEU n 2 441 LYS n 2 442 GLN n 2 443 ALA n 2 444 LEU n 2 445 THR n 2 446 ILE n 2 447 VAL n 2 448 GLY n 2 449 THR n 2 450 LEU n 2 451 PRO n 2 452 PHE n 2 453 THR n 2 454 TYR n 2 455 MET n 2 456 LEU n 2 457 GLU n 2 458 LYS n 2 459 TRP n 2 460 ARG n 2 461 TRP n 2 462 MET n 2 463 VAL n 2 464 PHE n 2 465 ARG n 2 466 GLY n 2 467 GLU n 2 468 ILE n 2 469 PRO n 2 470 LYS n 2 471 GLU n 2 472 GLN n 2 473 TRP n 2 474 MET n 2 475 LYS n 2 476 LYS n 2 477 TRP n 2 478 TRP n 2 479 GLU n 2 480 MET n 2 481 LYS n 2 482 ARG n 2 483 GLU n 2 484 ILE n 2 485 VAL n 2 486 GLY n 2 487 VAL n 2 488 VAL n 2 489 GLU n 2 490 PRO n 2 491 LEU n 2 492 PRO n 2 493 HIS n 2 494 ASP n 2 495 GLU n 2 496 THR n 2 497 TYR n 2 498 CYS n 2 499 ASP n 2 500 PRO n 2 501 ALA n 2 502 SER n 2 503 LEU n 2 504 PHE n 2 505 HIS n 2 506 VAL n 2 507 SER n 2 508 ASN n 2 509 ASP n 2 510 TYR n 2 511 SER n 2 512 PHE n 2 513 ILE n 2 514 ARG n 2 515 TYR n 2 516 TYR n 2 517 THR n 2 518 ARG n 2 519 THR n 2 520 ILE n 2 521 TYR n 2 522 GLN n 2 523 PHE n 2 524 GLN n 2 525 PHE n 2 526 GLN n 2 527 GLU n 2 528 ALA n 2 529 LEU n 2 530 CYS n 2 531 GLN n 2 532 ALA n 2 533 ALA n 2 534 LYS n 2 535 TYR n 2 536 ASN n 2 537 GLY n 2 538 SER n 2 539 LEU n 2 540 HIS n 2 541 LYS n 2 542 CYS n 2 543 ASP n 2 544 ILE n 2 545 SER n 2 546 ASN n 2 547 SER n 2 548 THR n 2 549 GLU n 2 550 ALA n 2 551 GLY n 2 552 GLN n 2 553 LYS n 2 554 LEU n 2 555 LEU n 2 556 LYS n 2 557 MET n 2 558 LEU n 2 559 SER n 2 560 LEU n 2 561 GLY n 2 562 ASN n 2 563 SER n 2 564 GLU n 2 565 PRO n 2 566 TRP n 2 567 THR n 2 568 LYS n 2 569 ALA n 2 570 LEU n 2 571 GLU n 2 572 ASN n 2 573 VAL n 2 574 VAL n 2 575 GLY n 2 576 ALA n 2 577 ARG n 2 578 ASN n 2 579 MET n 2 580 ASP n 2 581 VAL n 2 582 LYS n 2 583 PRO n 2 584 LEU n 2 585 LEU n 2 586 ASN n 2 587 TYR n 2 588 PHE n 2 589 GLN n 2 590 PRO n 2 591 LEU n 2 592 PHE n 2 593 ASP n 2 594 TRP n 2 595 LEU n 2 596 LYS n 2 597 GLU n 2 598 GLN n 2 599 ASN n 2 600 ARG n 2 601 ASN n 2 602 SER n 2 603 PHE n 2 604 VAL n 2 605 GLY n 2 606 TRP n 2 607 ASN n 2 608 THR n 2 609 GLU n 2 610 TRP n 2 611 SER n 2 612 PRO n 2 613 TYR n 2 614 ALA n 2 615 ASP n 2 616 HIS n 2 617 HIS n 2 618 HIS n 2 619 HIS n 2 620 HIS n 2 621 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 201 ? ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 621 'house mouse' ? Ace2 ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? 4 4 DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 5 4 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 6 4 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 3 4 3 BMA C1 O1 2 NAG O4 HO4 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 330 330 PRO PRO A . n A 1 2 ASN 2 331 331 ASN ASN A . n A 1 3 ILE 3 332 332 ILE ILE A . n A 1 4 THR 4 333 333 THR THR A . n A 1 5 ASN 5 334 334 ASN ASN A . n A 1 6 LEU 6 335 335 LEU LEU A . n A 1 7 CYS 7 336 336 CYS CYS A . n A 1 8 PRO 8 337 337 PRO PRO A . n A 1 9 PHE 9 338 338 PHE PHE A . n A 1 10 HIS 10 339 339 HIS HIS A . n A 1 11 GLU 11 340 340 GLU GLU A . n A 1 12 VAL 12 341 341 VAL VAL A . n A 1 13 PHE 13 342 342 PHE PHE A . n A 1 14 ASN 14 343 343 ASN ASN A . n A 1 15 ALA 15 344 344 ALA ALA A . n A 1 16 THR 16 345 345 THR THR A . n A 1 17 THR 17 346 346 THR THR A . n A 1 18 PHE 18 347 347 PHE PHE A . n A 1 19 ALA 19 348 348 ALA ALA A . n A 1 20 SER 20 349 349 SER SER A . n A 1 21 VAL 21 350 350 VAL VAL A . n A 1 22 TYR 22 351 351 TYR TYR A . n A 1 23 ALA 23 352 352 ALA ALA A . n A 1 24 TRP 24 353 353 TRP TRP A . n A 1 25 ASN 25 354 354 ASN ASN A . n A 1 26 ARG 26 355 355 ARG ARG A . n A 1 27 LYS 27 356 356 LYS LYS A . n A 1 28 ARG 28 357 357 ARG ARG A . n A 1 29 ILE 29 358 358 ILE ILE A . n A 1 30 SER 30 359 359 SER SER A . n A 1 31 ASN 31 360 360 ASN ASN A . n A 1 32 CYS 32 361 361 CYS CYS A . n A 1 33 VAL 33 362 362 VAL VAL A . n A 1 34 ALA 34 363 363 ALA ALA A . n A 1 35 ASP 35 364 364 ASP ASP A . n A 1 36 TYR 36 365 365 TYR TYR A . n A 1 37 SER 37 366 366 SER SER A . n A 1 38 VAL 38 367 367 VAL VAL A . n A 1 39 ILE 39 368 368 ILE ILE A . n A 1 40 TYR 40 369 369 TYR TYR A . n A 1 41 ASN 41 370 370 ASN ASN A . n A 1 42 PHE 42 371 371 PHE PHE A . n A 1 43 ALA 43 372 372 ALA ALA A . n A 1 44 PRO 44 373 373 PRO PRO A . n A 1 45 PHE 45 374 374 PHE PHE A . n A 1 46 PHE 46 375 375 PHE PHE A . n A 1 47 ALA 47 376 376 ALA ALA A . n A 1 48 PHE 48 377 377 PHE PHE A . n A 1 49 LYS 49 378 378 LYS LYS A . n A 1 50 CYS 50 379 379 CYS CYS A . n A 1 51 TYR 51 380 380 TYR TYR A . n A 1 52 GLY 52 381 381 GLY GLY A . n A 1 53 VAL 53 382 382 VAL VAL A . n A 1 54 SER 54 383 383 SER SER A . n A 1 55 PRO 55 384 384 PRO PRO A . n A 1 56 THR 56 385 385 THR THR A . n A 1 57 LYS 57 386 386 LYS LYS A . n A 1 58 LEU 58 387 387 LEU LEU A . n A 1 59 ASN 59 388 388 ASN ASN A . n A 1 60 ASP 60 389 389 ASP ASP A . n A 1 61 LEU 61 390 390 LEU LEU A . n A 1 62 CYS 62 391 391 CYS CYS A . n A 1 63 PHE 63 392 392 PHE PHE A . n A 1 64 THR 64 393 393 THR THR A . n A 1 65 ASN 65 394 394 ASN ASN A . n A 1 66 VAL 66 395 395 VAL VAL A . n A 1 67 TYR 67 396 396 TYR TYR A . n A 1 68 ALA 68 397 397 ALA ALA A . n A 1 69 ASP 69 398 398 ASP ASP A . n A 1 70 SER 70 399 399 SER SER A . n A 1 71 PHE 71 400 400 PHE PHE A . n A 1 72 VAL 72 401 401 VAL VAL A . n A 1 73 ILE 73 402 402 ILE ILE A . n A 1 74 ARG 74 403 403 ARG ARG A . n A 1 75 GLY 75 404 404 GLY GLY A . n A 1 76 ASN 76 405 405 ASN ASN A . n A 1 77 GLU 77 406 406 GLU GLU A . n A 1 78 VAL 78 407 407 VAL VAL A . n A 1 79 SER 79 408 408 SER SER A . n A 1 80 GLN 80 409 409 GLN GLN A . n A 1 81 ILE 81 410 410 ILE ILE A . n A 1 82 ALA 82 411 411 ALA ALA A . n A 1 83 PRO 83 412 412 PRO PRO A . n A 1 84 GLY 84 413 413 GLY GLY A . n A 1 85 GLN 85 414 414 GLN GLN A . n A 1 86 THR 86 415 415 THR THR A . n A 1 87 GLY 87 416 416 GLY GLY A . n A 1 88 ASN 88 417 417 ASN ASN A . n A 1 89 ILE 89 418 418 ILE ILE A . n A 1 90 ALA 90 419 419 ALA ALA A . n A 1 91 ASP 91 420 420 ASP ASP A . n A 1 92 TYR 92 421 421 TYR TYR A . n A 1 93 ASN 93 422 422 ASN ASN A . n A 1 94 TYR 94 423 423 TYR TYR A . n A 1 95 LYS 95 424 424 LYS LYS A . n A 1 96 LEU 96 425 425 LEU LEU A . n A 1 97 PRO 97 426 426 PRO PRO A . n A 1 98 ASP 98 427 427 ASP ASP A . n A 1 99 ASP 99 428 428 ASP ASP A . n A 1 100 PHE 100 429 429 PHE PHE A . n A 1 101 THR 101 430 430 THR THR A . n A 1 102 GLY 102 431 431 GLY GLY A . n A 1 103 CYS 103 432 432 CYS CYS A . n A 1 104 VAL 104 433 433 VAL VAL A . n A 1 105 ILE 105 434 434 ILE ILE A . n A 1 106 ALA 106 435 435 ALA ALA A . n A 1 107 TRP 107 436 436 TRP TRP A . n A 1 108 ASN 108 437 437 ASN ASN A . n A 1 109 SER 109 438 438 SER SER A . n A 1 110 ASN 110 439 439 ASN ASN A . n A 1 111 LYS 111 440 440 LYS LYS A . n A 1 112 LEU 112 441 441 LEU LEU A . n A 1 113 ASP 113 442 442 ASP ASP A . n A 1 114 SER 114 443 443 SER SER A . n A 1 115 LYS 115 444 444 LYS LYS A . n A 1 116 PRO 116 445 445 PRO PRO A . n A 1 117 SER 117 446 446 SER SER A . n A 1 118 GLY 118 447 447 GLY GLY A . n A 1 119 ASN 119 448 448 ASN ASN A . n A 1 120 TYR 120 449 449 TYR TYR A . n A 1 121 ASN 121 450 450 ASN ASN A . n A 1 122 TYR 122 451 451 TYR TYR A . n A 1 123 LEU 123 452 452 LEU LEU A . n A 1 124 TYR 124 453 453 TYR TYR A . n A 1 125 ARG 125 454 454 ARG ARG A . n A 1 126 LEU 126 455 455 LEU LEU A . n A 1 127 PHE 127 456 456 PHE PHE A . n A 1 128 ARG 128 457 457 ARG ARG A . n A 1 129 LYS 129 458 458 LYS LYS A . n A 1 130 SER 130 459 459 SER SER A . n A 1 131 LYS 131 460 460 LYS LYS A . n A 1 132 LEU 132 461 461 LEU LEU A . n A 1 133 LYS 133 462 462 LYS LYS A . n A 1 134 PRO 134 463 463 PRO PRO A . n A 1 135 PHE 135 464 464 PHE PHE A . n A 1 136 GLU 136 465 465 GLU GLU A . n A 1 137 ARG 137 466 466 ARG ARG A . n A 1 138 ASP 138 467 467 ASP ASP A . n A 1 139 ILE 139 468 468 ILE ILE A . n A 1 140 SER 140 469 469 SER SER A . n A 1 141 THR 141 470 470 THR THR A . n A 1 142 GLU 142 471 471 GLU GLU A . n A 1 143 ILE 143 472 472 ILE ILE A . n A 1 144 TYR 144 473 473 TYR TYR A . n A 1 145 GLN 145 474 474 GLN GLN A . n A 1 146 ALA 146 475 475 ALA ALA A . n A 1 147 GLY 147 476 476 GLY GLY A . n A 1 148 ASN 148 477 477 ASN ASN A . n A 1 149 LYS 149 478 478 LYS LYS A . n A 1 150 PRO 150 479 479 PRO PRO A . n A 1 151 CYS 151 480 480 CYS CYS A . n A 1 152 ASN 152 481 481 ASN ASN A . n A 1 153 GLY 153 482 482 GLY GLY A . n A 1 154 VAL 154 483 483 VAL VAL A . n A 1 155 ALA 155 484 484 ALA ALA A . n A 1 156 GLY 156 485 485 GLY GLY A . n A 1 157 PRO 157 486 486 PRO PRO A . n A 1 158 ASN 158 487 487 ASN ASN A . n A 1 159 CYS 159 488 488 CYS CYS A . n A 1 160 TYR 160 489 489 TYR TYR A . n A 1 161 SER 161 490 490 SER SER A . n A 1 162 PRO 162 491 491 PRO PRO A . n A 1 163 LEU 163 492 492 LEU LEU A . n A 1 164 GLN 164 493 493 GLN GLN A . n A 1 165 SER 165 494 494 SER SER A . n A 1 166 TYR 166 495 495 TYR TYR A . n A 1 167 GLY 167 496 496 GLY GLY A . n A 1 168 PHE 168 497 497 PHE PHE A . n A 1 169 ARG 169 498 498 ARG ARG A . n A 1 170 PRO 170 499 499 PRO PRO A . n A 1 171 THR 171 500 500 THR THR A . n A 1 172 TYR 172 501 501 TYR TYR A . n A 1 173 GLY 173 502 502 GLY GLY A . n A 1 174 VAL 174 503 503 VAL VAL A . n A 1 175 GLY 175 504 504 GLY GLY A . n A 1 176 HIS 176 505 505 HIS HIS A . n A 1 177 GLN 177 506 506 GLN GLN A . n A 1 178 PRO 178 507 507 PRO PRO A . n A 1 179 TYR 179 508 508 TYR TYR A . n A 1 180 ARG 180 509 509 ARG ARG A . n A 1 181 VAL 181 510 510 VAL VAL A . n A 1 182 VAL 182 511 511 VAL VAL A . n A 1 183 VAL 183 512 512 VAL VAL A . n A 1 184 LEU 184 513 513 LEU LEU A . n A 1 185 SER 185 514 514 SER SER A . n A 1 186 PHE 186 515 515 PHE PHE A . n A 1 187 GLU 187 516 516 GLU GLU A . n A 1 188 LEU 188 517 517 LEU LEU A . n A 1 189 LEU 189 518 518 LEU LEU A . n A 1 190 HIS 190 519 519 HIS HIS A . n A 1 191 ALA 191 520 520 ALA ALA A . n A 1 192 PRO 192 521 521 PRO PRO A . n A 1 193 ALA 193 522 522 ALA ALA A . n A 1 194 THR 194 523 523 THR THR A . n A 1 195 VAL 195 524 524 VAL VAL A . n A 1 196 CYS 196 525 525 CYS CYS A . n A 1 197 GLY 197 526 526 GLY GLY A . n A 1 198 PRO 198 527 527 PRO PRO A . n A 1 199 LYS 199 528 528 LYS LYS A . n A 1 200 LYS 200 529 529 LYS LYS A . n A 1 201 SER 201 530 530 SER SER A . n B 2 1 MET 1 1 ? ? ? D . n B 2 2 SER 2 2 ? ? ? D . n B 2 3 SER 3 3 ? ? ? D . n B 2 4 SER 4 4 ? ? ? D . n B 2 5 SER 5 5 ? ? ? D . n B 2 6 TRP 6 6 ? ? ? D . n B 2 7 LEU 7 7 ? ? ? D . n B 2 8 LEU 8 8 ? ? ? D . n B 2 9 LEU 9 9 ? ? ? D . n B 2 10 SER 10 10 ? ? ? D . n B 2 11 LEU 11 11 ? ? ? D . n B 2 12 VAL 12 12 ? ? ? D . n B 2 13 ALA 13 13 ? ? ? D . n B 2 14 VAL 14 14 ? ? ? D . n B 2 15 THR 15 15 ? ? ? D . n B 2 16 THR 16 16 ? ? ? D . n B 2 17 ALA 17 17 ? ? ? D . n B 2 18 GLN 18 18 ? ? ? D . n B 2 19 SER 19 19 ? ? ? D . n B 2 20 LEU 20 20 20 LEU LEU D . n B 2 21 THR 21 21 21 THR THR D . n B 2 22 GLU 22 22 22 GLU GLU D . n B 2 23 GLU 23 23 23 GLU GLU D . n B 2 24 ASN 24 24 24 ASN ASN D . n B 2 25 ALA 25 25 25 ALA ALA D . n B 2 26 LYS 26 26 26 LYS LYS D . n B 2 27 THR 27 27 27 THR THR D . n B 2 28 PHE 28 28 28 PHE PHE D . n B 2 29 LEU 29 29 29 LEU LEU D . n B 2 30 ASN 30 30 30 ASN ASN D . n B 2 31 ASN 31 31 31 ASN ASN D . n B 2 32 PHE 32 32 32 PHE PHE D . n B 2 33 ASN 33 33 33 ASN ASN D . n B 2 34 GLN 34 34 34 GLN GLN D . n B 2 35 GLU 35 35 35 GLU GLU D . n B 2 36 ALA 36 36 36 ALA ALA D . n B 2 37 GLU 37 37 37 GLU GLU D . n B 2 38 ASP 38 38 38 ASP ASP D . n B 2 39 LEU 39 39 39 LEU LEU D . n B 2 40 SER 40 40 40 SER SER D . n B 2 41 TYR 41 41 41 TYR TYR D . n B 2 42 GLN 42 42 42 GLN GLN D . n B 2 43 SER 43 43 43 SER SER D . n B 2 44 SER 44 44 44 SER SER D . n B 2 45 LEU 45 45 45 LEU LEU D . n B 2 46 ALA 46 46 46 ALA ALA D . n B 2 47 SER 47 47 47 SER SER D . n B 2 48 TRP 48 48 48 TRP TRP D . n B 2 49 ASN 49 49 49 ASN ASN D . n B 2 50 TYR 50 50 50 TYR TYR D . n B 2 51 ASN 51 51 51 ASN ASN D . n B 2 52 THR 52 52 52 THR THR D . n B 2 53 ASN 53 53 53 ASN ASN D . n B 2 54 ILE 54 54 54 ILE ILE D . n B 2 55 THR 55 55 55 THR THR D . n B 2 56 GLU 56 56 56 GLU GLU D . n B 2 57 GLU 57 57 57 GLU GLU D . n B 2 58 ASN 58 58 58 ASN ASN D . n B 2 59 ALA 59 59 59 ALA ALA D . n B 2 60 GLN 60 60 60 GLN GLN D . n B 2 61 LYS 61 61 61 LYS LYS D . n B 2 62 MET 62 62 62 MET MET D . n B 2 63 SER 63 63 63 SER SER D . n B 2 64 GLU 64 64 64 GLU GLU D . n B 2 65 ALA 65 65 65 ALA ALA D . n B 2 66 ALA 66 66 66 ALA ALA D . n B 2 67 ALA 67 67 67 ALA ALA D . n B 2 68 LYS 68 68 68 LYS LYS D . n B 2 69 TRP 69 69 69 TRP TRP D . n B 2 70 SER 70 70 70 SER SER D . n B 2 71 ALA 71 71 71 ALA ALA D . n B 2 72 PHE 72 72 72 PHE PHE D . n B 2 73 TYR 73 73 73 TYR TYR D . n B 2 74 GLU 74 74 74 GLU GLU D . n B 2 75 GLU 75 75 75 GLU GLU D . n B 2 76 GLN 76 76 76 GLN GLN D . n B 2 77 SER 77 77 77 SER SER D . n B 2 78 LYS 78 78 78 LYS LYS D . n B 2 79 THR 79 79 79 THR THR D . n B 2 80 ALA 80 80 80 ALA ALA D . n B 2 81 GLN 81 81 81 GLN GLN D . n B 2 82 SER 82 82 82 SER SER D . n B 2 83 PHE 83 83 83 PHE PHE D . n B 2 84 SER 84 84 84 SER SER D . n B 2 85 LEU 85 85 85 LEU LEU D . n B 2 86 GLN 86 86 86 GLN GLN D . n B 2 87 GLU 87 87 87 GLU GLU D . n B 2 88 ILE 88 88 88 ILE ILE D . n B 2 89 GLN 89 89 89 GLN GLN D . n B 2 90 THR 90 90 90 THR THR D . n B 2 91 PRO 91 91 91 PRO PRO D . n B 2 92 ILE 92 92 92 ILE ILE D . n B 2 93 ILE 93 93 93 ILE ILE D . n B 2 94 LYS 94 94 94 LYS LYS D . n B 2 95 ARG 95 95 95 ARG ARG D . n B 2 96 GLN 96 96 96 GLN GLN D . n B 2 97 LEU 97 97 97 LEU LEU D . n B 2 98 GLN 98 98 98 GLN GLN D . n B 2 99 ALA 99 99 99 ALA ALA D . n B 2 100 LEU 100 100 100 LEU LEU D . n B 2 101 GLN 101 101 101 GLN GLN D . n B 2 102 GLN 102 102 102 GLN GLN D . n B 2 103 SER 103 103 103 SER SER D . n B 2 104 GLY 104 104 104 GLY GLY D . n B 2 105 SER 105 105 105 SER SER D . n B 2 106 SER 106 106 106 SER SER D . n B 2 107 ALA 107 107 107 ALA ALA D . n B 2 108 LEU 108 108 108 LEU LEU D . n B 2 109 SER 109 109 109 SER SER D . n B 2 110 ALA 110 110 110 ALA ALA D . n B 2 111 ASP 111 111 111 ASP ASP D . n B 2 112 LYS 112 112 112 LYS LYS D . n B 2 113 ASN 113 113 113 ASN ASN D . n B 2 114 LYS 114 114 114 LYS LYS D . n B 2 115 GLN 115 115 115 GLN GLN D . n B 2 116 LEU 116 116 116 LEU LEU D . n B 2 117 ASN 117 117 117 ASN ASN D . n B 2 118 THR 118 118 118 THR THR D . n B 2 119 ILE 119 119 119 ILE ILE D . n B 2 120 LEU 120 120 120 LEU LEU D . n B 2 121 ASN 121 121 121 ASN ASN D . n B 2 122 THR 122 122 122 THR THR D . n B 2 123 MET 123 123 123 MET MET D . n B 2 124 SER 124 124 124 SER SER D . n B 2 125 THR 125 125 125 THR THR D . n B 2 126 ILE 126 126 126 ILE ILE D . n B 2 127 TYR 127 127 127 TYR TYR D . n B 2 128 SER 128 128 128 SER SER D . n B 2 129 THR 129 129 129 THR THR D . n B 2 130 GLY 130 130 130 GLY GLY D . n B 2 131 LYS 131 131 131 LYS LYS D . n B 2 132 VAL 132 132 132 VAL VAL D . n B 2 133 CYS 133 133 133 CYS CYS D . n B 2 134 ASN 134 134 134 ASN ASN D . n B 2 135 PRO 135 135 135 PRO PRO D . n B 2 136 LYS 136 136 136 LYS LYS D . n B 2 137 ASN 137 137 137 ASN ASN D . n B 2 138 PRO 138 138 138 PRO PRO D . n B 2 139 GLN 139 139 139 GLN GLN D . n B 2 140 GLU 140 140 140 GLU GLU D . n B 2 141 CYS 141 141 141 CYS CYS D . n B 2 142 LEU 142 142 142 LEU LEU D . n B 2 143 LEU 143 143 143 LEU LEU D . n B 2 144 LEU 144 144 144 LEU LEU D . n B 2 145 GLU 145 145 145 GLU GLU D . n B 2 146 PRO 146 146 146 PRO PRO D . n B 2 147 GLY 147 147 147 GLY GLY D . n B 2 148 LEU 148 148 148 LEU LEU D . n B 2 149 ASP 149 149 149 ASP ASP D . n B 2 150 GLU 150 150 150 GLU GLU D . n B 2 151 ILE 151 151 151 ILE ILE D . n B 2 152 MET 152 152 152 MET MET D . n B 2 153 ALA 153 153 153 ALA ALA D . n B 2 154 THR 154 154 154 THR THR D . n B 2 155 SER 155 155 155 SER SER D . n B 2 156 THR 156 156 156 THR THR D . n B 2 157 ASP 157 157 157 ASP ASP D . n B 2 158 TYR 158 158 158 TYR TYR D . n B 2 159 ASN 159 159 159 ASN ASN D . n B 2 160 SER 160 160 160 SER SER D . n B 2 161 ARG 161 161 161 ARG ARG D . n B 2 162 LEU 162 162 162 LEU LEU D . n B 2 163 TRP 163 163 163 TRP TRP D . n B 2 164 ALA 164 164 164 ALA ALA D . n B 2 165 TRP 165 165 165 TRP TRP D . n B 2 166 GLU 166 166 166 GLU GLU D . n B 2 167 GLY 167 167 167 GLY GLY D . n B 2 168 TRP 168 168 168 TRP TRP D . n B 2 169 ARG 169 169 169 ARG ARG D . n B 2 170 ALA 170 170 170 ALA ALA D . n B 2 171 GLU 171 171 171 GLU GLU D . n B 2 172 VAL 172 172 172 VAL VAL D . n B 2 173 GLY 173 173 173 GLY GLY D . n B 2 174 LYS 174 174 174 LYS LYS D . n B 2 175 GLN 175 175 175 GLN GLN D . n B 2 176 LEU 176 176 176 LEU LEU D . n B 2 177 ARG 177 177 177 ARG ARG D . n B 2 178 PRO 178 178 178 PRO PRO D . n B 2 179 LEU 179 179 179 LEU LEU D . n B 2 180 TYR 180 180 180 TYR TYR D . n B 2 181 GLU 181 181 181 GLU GLU D . n B 2 182 GLU 182 182 182 GLU GLU D . n B 2 183 TYR 183 183 183 TYR TYR D . n B 2 184 VAL 184 184 184 VAL VAL D . n B 2 185 VAL 185 185 185 VAL VAL D . n B 2 186 LEU 186 186 186 LEU LEU D . n B 2 187 LYS 187 187 187 LYS LYS D . n B 2 188 ASN 188 188 188 ASN ASN D . n B 2 189 GLU 189 189 189 GLU GLU D . n B 2 190 MET 190 190 190 MET MET D . n B 2 191 ALA 191 191 191 ALA ALA D . n B 2 192 ARG 192 192 192 ARG ARG D . n B 2 193 ALA 193 193 193 ALA ALA D . n B 2 194 ASN 194 194 194 ASN ASN D . n B 2 195 ASN 195 195 195 ASN ASN D . n B 2 196 TYR 196 196 196 TYR TYR D . n B 2 197 ASN 197 197 197 ASN ASN D . n B 2 198 ASP 198 198 198 ASP ASP D . n B 2 199 TYR 199 199 199 TYR TYR D . n B 2 200 GLY 200 200 200 GLY GLY D . n B 2 201 ASP 201 201 201 ASP ASP D . n B 2 202 TYR 202 202 202 TYR TYR D . n B 2 203 TRP 203 203 203 TRP TRP D . n B 2 204 ARG 204 204 204 ARG ARG D . n B 2 205 GLY 205 205 205 GLY GLY D . n B 2 206 ASP 206 206 206 ASP ASP D . n B 2 207 TYR 207 207 207 TYR TYR D . n B 2 208 GLU 208 208 208 GLU GLU D . n B 2 209 ALA 209 209 209 ALA ALA D . n B 2 210 GLU 210 210 210 GLU GLU D . n B 2 211 GLY 211 211 211 GLY GLY D . n B 2 212 ALA 212 212 212 ALA ALA D . n B 2 213 ASP 213 213 213 ASP ASP D . n B 2 214 GLY 214 214 214 GLY GLY D . n B 2 215 TYR 215 215 215 TYR TYR D . n B 2 216 ASN 216 216 216 ASN ASN D . n B 2 217 TYR 217 217 217 TYR TYR D . n B 2 218 ASN 218 218 218 ASN ASN D . n B 2 219 ARG 219 219 219 ARG ARG D . n B 2 220 ASN 220 220 220 ASN ASN D . n B 2 221 GLN 221 221 221 GLN GLN D . n B 2 222 LEU 222 222 222 LEU LEU D . n B 2 223 ILE 223 223 223 ILE ILE D . n B 2 224 GLU 224 224 224 GLU GLU D . n B 2 225 ASP 225 225 225 ASP ASP D . n B 2 226 VAL 226 226 226 VAL VAL D . n B 2 227 GLU 227 227 227 GLU GLU D . n B 2 228 ARG 228 228 228 ARG ARG D . n B 2 229 THR 229 229 229 THR THR D . n B 2 230 PHE 230 230 230 PHE PHE D . n B 2 231 ALA 231 231 231 ALA ALA D . n B 2 232 GLU 232 232 232 GLU GLU D . n B 2 233 ILE 233 233 233 ILE ILE D . n B 2 234 LYS 234 234 234 LYS LYS D . n B 2 235 PRO 235 235 235 PRO PRO D . n B 2 236 LEU 236 236 236 LEU LEU D . n B 2 237 TYR 237 237 237 TYR TYR D . n B 2 238 GLU 238 238 238 GLU GLU D . n B 2 239 HIS 239 239 239 HIS HIS D . n B 2 240 LEU 240 240 240 LEU LEU D . n B 2 241 HIS 241 241 241 HIS HIS D . n B 2 242 ALA 242 242 242 ALA ALA D . n B 2 243 TYR 243 243 243 TYR TYR D . n B 2 244 VAL 244 244 244 VAL VAL D . n B 2 245 ARG 245 245 245 ARG ARG D . n B 2 246 ARG 246 246 246 ARG ARG D . n B 2 247 LYS 247 247 247 LYS LYS D . n B 2 248 LEU 248 248 248 LEU LEU D . n B 2 249 MET 249 249 249 MET MET D . n B 2 250 ASP 250 250 250 ASP ASP D . n B 2 251 THR 251 251 251 THR THR D . n B 2 252 TYR 252 252 252 TYR TYR D . n B 2 253 PRO 253 253 253 PRO PRO D . n B 2 254 SER 254 254 254 SER SER D . n B 2 255 TYR 255 255 255 TYR TYR D . n B 2 256 ILE 256 256 256 ILE ILE D . n B 2 257 SER 257 257 257 SER SER D . n B 2 258 PRO 258 258 258 PRO PRO D . n B 2 259 THR 259 259 259 THR THR D . n B 2 260 GLY 260 260 260 GLY GLY D . n B 2 261 CYS 261 261 261 CYS CYS D . n B 2 262 LEU 262 262 262 LEU LEU D . n B 2 263 PRO 263 263 263 PRO PRO D . n B 2 264 ALA 264 264 264 ALA ALA D . n B 2 265 HIS 265 265 265 HIS HIS D . n B 2 266 LEU 266 266 266 LEU LEU D . n B 2 267 LEU 267 267 267 LEU LEU D . n B 2 268 GLY 268 268 268 GLY GLY D . n B 2 269 ASP 269 269 269 ASP ASP D . n B 2 270 MET 270 270 270 MET MET D . n B 2 271 TRP 271 271 271 TRP TRP D . n B 2 272 GLY 272 272 272 GLY GLY D . n B 2 273 ARG 273 273 273 ARG ARG D . n B 2 274 PHE 274 274 274 PHE PHE D . n B 2 275 TRP 275 275 275 TRP TRP D . n B 2 276 THR 276 276 276 THR THR D . n B 2 277 ASN 277 277 277 ASN ASN D . n B 2 278 LEU 278 278 278 LEU LEU D . n B 2 279 TYR 279 279 279 TYR TYR D . n B 2 280 PRO 280 280 280 PRO PRO D . n B 2 281 LEU 281 281 281 LEU LEU D . n B 2 282 THR 282 282 282 THR THR D . n B 2 283 VAL 283 283 283 VAL VAL D . n B 2 284 PRO 284 284 284 PRO PRO D . n B 2 285 PHE 285 285 285 PHE PHE D . n B 2 286 ALA 286 286 286 ALA ALA D . n B 2 287 GLN 287 287 287 GLN GLN D . n B 2 288 LYS 288 288 288 LYS LYS D . n B 2 289 PRO 289 289 289 PRO PRO D . n B 2 290 ASN 290 290 290 ASN ASN D . n B 2 291 ILE 291 291 291 ILE ILE D . n B 2 292 ASP 292 292 292 ASP ASP D . n B 2 293 VAL 293 293 293 VAL VAL D . n B 2 294 THR 294 294 294 THR THR D . n B 2 295 ASP 295 295 295 ASP ASP D . n B 2 296 ALA 296 296 296 ALA ALA D . n B 2 297 MET 297 297 297 MET MET D . n B 2 298 MET 298 298 298 MET MET D . n B 2 299 ASN 299 299 299 ASN ASN D . n B 2 300 GLN 300 300 300 GLN GLN D . n B 2 301 GLY 301 301 301 GLY GLY D . n B 2 302 TRP 302 302 302 TRP TRP D . n B 2 303 ASP 303 303 303 ASP ASP D . n B 2 304 ALA 304 304 304 ALA ALA D . n B 2 305 GLU 305 305 305 GLU GLU D . n B 2 306 ARG 306 306 306 ARG ARG D . n B 2 307 ILE 307 307 307 ILE ILE D . n B 2 308 PHE 308 308 308 PHE PHE D . n B 2 309 GLN 309 309 309 GLN GLN D . n B 2 310 GLU 310 310 310 GLU GLU D . n B 2 311 ALA 311 311 311 ALA ALA D . n B 2 312 GLU 312 312 312 GLU GLU D . n B 2 313 LYS 313 313 313 LYS LYS D . n B 2 314 PHE 314 314 314 PHE PHE D . n B 2 315 PHE 315 315 315 PHE PHE D . n B 2 316 VAL 316 316 316 VAL VAL D . n B 2 317 SER 317 317 317 SER SER D . n B 2 318 VAL 318 318 318 VAL VAL D . n B 2 319 GLY 319 319 319 GLY GLY D . n B 2 320 LEU 320 320 320 LEU LEU D . n B 2 321 PRO 321 321 321 PRO PRO D . n B 2 322 HIS 322 322 322 HIS HIS D . n B 2 323 MET 323 323 323 MET MET D . n B 2 324 THR 324 324 324 THR THR D . n B 2 325 GLN 325 325 325 GLN GLN D . n B 2 326 GLY 326 326 326 GLY GLY D . n B 2 327 PHE 327 327 327 PHE PHE D . n B 2 328 TRP 328 328 328 TRP TRP D . n B 2 329 ALA 329 329 329 ALA ALA D . n B 2 330 ASN 330 330 330 ASN ASN D . n B 2 331 SER 331 331 331 SER SER D . n B 2 332 MET 332 332 332 MET MET D . n B 2 333 LEU 333 333 333 LEU LEU D . n B 2 334 THR 334 334 334 THR THR D . n B 2 335 GLU 335 335 335 GLU GLU D . n B 2 336 PRO 336 336 336 PRO PRO D . n B 2 337 ALA 337 337 337 ALA ALA D . n B 2 338 ASP 338 338 338 ASP ASP D . n B 2 339 GLY 339 339 339 GLY GLY D . n B 2 340 ARG 340 340 340 ARG ARG D . n B 2 341 LYS 341 341 341 LYS LYS D . n B 2 342 VAL 342 342 342 VAL VAL D . n B 2 343 VAL 343 343 343 VAL VAL D . n B 2 344 CYS 344 344 344 CYS CYS D . n B 2 345 HIS 345 345 345 HIS HIS D . n B 2 346 PRO 346 346 346 PRO PRO D . n B 2 347 THR 347 347 347 THR THR D . n B 2 348 ALA 348 348 348 ALA ALA D . n B 2 349 TRP 349 349 349 TRP TRP D . n B 2 350 ASP 350 350 350 ASP ASP D . n B 2 351 LEU 351 351 351 LEU LEU D . n B 2 352 GLY 352 352 352 GLY GLY D . n B 2 353 HIS 353 353 353 HIS HIS D . n B 2 354 GLY 354 354 354 GLY GLY D . n B 2 355 ASP 355 355 355 ASP ASP D . n B 2 356 PHE 356 356 356 PHE PHE D . n B 2 357 ARG 357 357 357 ARG ARG D . n B 2 358 ILE 358 358 358 ILE ILE D . n B 2 359 LYS 359 359 359 LYS LYS D . n B 2 360 MET 360 360 360 MET MET D . n B 2 361 CYS 361 361 361 CYS CYS D . n B 2 362 THR 362 362 362 THR THR D . n B 2 363 LYS 363 363 363 LYS LYS D . n B 2 364 VAL 364 364 364 VAL VAL D . n B 2 365 THR 365 365 365 THR THR D . n B 2 366 MET 366 366 366 MET MET D . n B 2 367 ASP 367 367 367 ASP ASP D . n B 2 368 ASN 368 368 368 ASN ASN D . n B 2 369 PHE 369 369 369 PHE PHE D . n B 2 370 LEU 370 370 370 LEU LEU D . n B 2 371 THR 371 371 371 THR THR D . n B 2 372 ALA 372 372 372 ALA ALA D . n B 2 373 HIS 373 373 373 HIS HIS D . n B 2 374 HIS 374 374 374 HIS HIS D . n B 2 375 GLU 375 375 375 GLU GLU D . n B 2 376 MET 376 376 376 MET MET D . n B 2 377 GLY 377 377 377 GLY GLY D . n B 2 378 HIS 378 378 378 HIS HIS D . n B 2 379 ILE 379 379 379 ILE ILE D . n B 2 380 GLN 380 380 380 GLN GLN D . n B 2 381 TYR 381 381 381 TYR TYR D . n B 2 382 ASP 382 382 382 ASP ASP D . n B 2 383 MET 383 383 383 MET MET D . n B 2 384 ALA 384 384 384 ALA ALA D . n B 2 385 TYR 385 385 385 TYR TYR D . n B 2 386 ALA 386 386 386 ALA ALA D . n B 2 387 ARG 387 387 387 ARG ARG D . n B 2 388 GLN 388 388 388 GLN GLN D . n B 2 389 PRO 389 389 389 PRO PRO D . n B 2 390 PHE 390 390 390 PHE PHE D . n B 2 391 LEU 391 391 391 LEU LEU D . n B 2 392 LEU 392 392 392 LEU LEU D . n B 2 393 ARG 393 393 393 ARG ARG D . n B 2 394 ASN 394 394 394 ASN ASN D . n B 2 395 GLY 395 395 395 GLY GLY D . n B 2 396 ALA 396 396 396 ALA ALA D . n B 2 397 ASN 397 397 397 ASN ASN D . n B 2 398 GLU 398 398 398 GLU GLU D . n B 2 399 GLY 399 399 399 GLY GLY D . n B 2 400 PHE 400 400 400 PHE PHE D . n B 2 401 HIS 401 401 401 HIS HIS D . n B 2 402 GLU 402 402 402 GLU GLU D . n B 2 403 ALA 403 403 403 ALA ALA D . n B 2 404 VAL 404 404 404 VAL VAL D . n B 2 405 GLY 405 405 405 GLY GLY D . n B 2 406 GLU 406 406 406 GLU GLU D . n B 2 407 ILE 407 407 407 ILE ILE D . n B 2 408 MET 408 408 408 MET MET D . n B 2 409 SER 409 409 409 SER SER D . n B 2 410 LEU 410 410 410 LEU LEU D . n B 2 411 SER 411 411 411 SER SER D . n B 2 412 ALA 412 412 412 ALA ALA D . n B 2 413 ALA 413 413 413 ALA ALA D . n B 2 414 THR 414 414 414 THR THR D . n B 2 415 PRO 415 415 415 PRO PRO D . n B 2 416 LYS 416 416 416 LYS LYS D . n B 2 417 HIS 417 417 417 HIS HIS D . n B 2 418 LEU 418 418 418 LEU LEU D . n B 2 419 LYS 419 419 419 LYS LYS D . n B 2 420 SER 420 420 420 SER SER D . n B 2 421 ILE 421 421 421 ILE ILE D . n B 2 422 GLY 422 422 422 GLY GLY D . n B 2 423 LEU 423 423 423 LEU LEU D . n B 2 424 LEU 424 424 424 LEU LEU D . n B 2 425 PRO 425 425 425 PRO PRO D . n B 2 426 SER 426 426 426 SER SER D . n B 2 427 ASP 427 427 427 ASP ASP D . n B 2 428 PHE 428 428 428 PHE PHE D . n B 2 429 GLN 429 429 429 GLN GLN D . n B 2 430 GLU 430 430 430 GLU GLU D . n B 2 431 ASP 431 431 431 ASP ASP D . n B 2 432 SER 432 432 432 SER SER D . n B 2 433 GLU 433 433 433 GLU GLU D . n B 2 434 THR 434 434 434 THR THR D . n B 2 435 GLU 435 435 435 GLU GLU D . n B 2 436 ILE 436 436 436 ILE ILE D . n B 2 437 ASN 437 437 437 ASN ASN D . n B 2 438 PHE 438 438 438 PHE PHE D . n B 2 439 LEU 439 439 439 LEU LEU D . n B 2 440 LEU 440 440 440 LEU LEU D . n B 2 441 LYS 441 441 441 LYS LYS D . n B 2 442 GLN 442 442 442 GLN GLN D . n B 2 443 ALA 443 443 443 ALA ALA D . n B 2 444 LEU 444 444 444 LEU LEU D . n B 2 445 THR 445 445 445 THR THR D . n B 2 446 ILE 446 446 446 ILE ILE D . n B 2 447 VAL 447 447 447 VAL VAL D . n B 2 448 GLY 448 448 448 GLY GLY D . n B 2 449 THR 449 449 449 THR THR D . n B 2 450 LEU 450 450 450 LEU LEU D . n B 2 451 PRO 451 451 451 PRO PRO D . n B 2 452 PHE 452 452 452 PHE PHE D . n B 2 453 THR 453 453 453 THR THR D . n B 2 454 TYR 454 454 454 TYR TYR D . n B 2 455 MET 455 455 455 MET MET D . n B 2 456 LEU 456 456 456 LEU LEU D . n B 2 457 GLU 457 457 457 GLU GLU D . n B 2 458 LYS 458 458 458 LYS LYS D . n B 2 459 TRP 459 459 459 TRP TRP D . n B 2 460 ARG 460 460 460 ARG ARG D . n B 2 461 TRP 461 461 461 TRP TRP D . n B 2 462 MET 462 462 462 MET MET D . n B 2 463 VAL 463 463 463 VAL VAL D . n B 2 464 PHE 464 464 464 PHE PHE D . n B 2 465 ARG 465 465 465 ARG ARG D . n B 2 466 GLY 466 466 466 GLY GLY D . n B 2 467 GLU 467 467 467 GLU GLU D . n B 2 468 ILE 468 468 468 ILE ILE D . n B 2 469 PRO 469 469 469 PRO PRO D . n B 2 470 LYS 470 470 470 LYS LYS D . n B 2 471 GLU 471 471 471 GLU GLU D . n B 2 472 GLN 472 472 472 GLN GLN D . n B 2 473 TRP 473 473 473 TRP TRP D . n B 2 474 MET 474 474 474 MET MET D . n B 2 475 LYS 475 475 475 LYS LYS D . n B 2 476 LYS 476 476 476 LYS LYS D . n B 2 477 TRP 477 477 477 TRP TRP D . n B 2 478 TRP 478 478 478 TRP TRP D . n B 2 479 GLU 479 479 479 GLU GLU D . n B 2 480 MET 480 480 480 MET MET D . n B 2 481 LYS 481 481 481 LYS LYS D . n B 2 482 ARG 482 482 482 ARG ARG D . n B 2 483 GLU 483 483 483 GLU GLU D . n B 2 484 ILE 484 484 484 ILE ILE D . n B 2 485 VAL 485 485 485 VAL VAL D . n B 2 486 GLY 486 486 486 GLY GLY D . n B 2 487 VAL 487 487 487 VAL VAL D . n B 2 488 VAL 488 488 488 VAL VAL D . n B 2 489 GLU 489 489 489 GLU GLU D . n B 2 490 PRO 490 490 490 PRO PRO D . n B 2 491 LEU 491 491 491 LEU LEU D . n B 2 492 PRO 492 492 492 PRO PRO D . n B 2 493 HIS 493 493 493 HIS HIS D . n B 2 494 ASP 494 494 494 ASP ASP D . n B 2 495 GLU 495 495 495 GLU GLU D . n B 2 496 THR 496 496 496 THR THR D . n B 2 497 TYR 497 497 497 TYR TYR D . n B 2 498 CYS 498 498 498 CYS CYS D . n B 2 499 ASP 499 499 499 ASP ASP D . n B 2 500 PRO 500 500 500 PRO PRO D . n B 2 501 ALA 501 501 501 ALA ALA D . n B 2 502 SER 502 502 502 SER SER D . n B 2 503 LEU 503 503 503 LEU LEU D . n B 2 504 PHE 504 504 504 PHE PHE D . n B 2 505 HIS 505 505 505 HIS HIS D . n B 2 506 VAL 506 506 506 VAL VAL D . n B 2 507 SER 507 507 507 SER SER D . n B 2 508 ASN 508 508 508 ASN ASN D . n B 2 509 ASP 509 509 509 ASP ASP D . n B 2 510 TYR 510 510 510 TYR TYR D . n B 2 511 SER 511 511 511 SER SER D . n B 2 512 PHE 512 512 512 PHE PHE D . n B 2 513 ILE 513 513 513 ILE ILE D . n B 2 514 ARG 514 514 514 ARG ARG D . n B 2 515 TYR 515 515 515 TYR TYR D . n B 2 516 TYR 516 516 516 TYR TYR D . n B 2 517 THR 517 517 517 THR THR D . n B 2 518 ARG 518 518 518 ARG ARG D . n B 2 519 THR 519 519 519 THR THR D . n B 2 520 ILE 520 520 520 ILE ILE D . n B 2 521 TYR 521 521 521 TYR TYR D . n B 2 522 GLN 522 522 522 GLN GLN D . n B 2 523 PHE 523 523 523 PHE PHE D . n B 2 524 GLN 524 524 524 GLN GLN D . n B 2 525 PHE 525 525 525 PHE PHE D . n B 2 526 GLN 526 526 526 GLN GLN D . n B 2 527 GLU 527 527 527 GLU GLU D . n B 2 528 ALA 528 528 528 ALA ALA D . n B 2 529 LEU 529 529 529 LEU LEU D . n B 2 530 CYS 530 530 530 CYS CYS D . n B 2 531 GLN 531 531 531 GLN GLN D . n B 2 532 ALA 532 532 532 ALA ALA D . n B 2 533 ALA 533 533 533 ALA ALA D . n B 2 534 LYS 534 534 534 LYS LYS D . n B 2 535 TYR 535 535 535 TYR TYR D . n B 2 536 ASN 536 536 536 ASN ASN D . n B 2 537 GLY 537 537 537 GLY GLY D . n B 2 538 SER 538 538 538 SER SER D . n B 2 539 LEU 539 539 539 LEU LEU D . n B 2 540 HIS 540 540 540 HIS HIS D . n B 2 541 LYS 541 541 541 LYS LYS D . n B 2 542 CYS 542 542 542 CYS CYS D . n B 2 543 ASP 543 543 543 ASP ASP D . n B 2 544 ILE 544 544 544 ILE ILE D . n B 2 545 SER 545 545 545 SER SER D . n B 2 546 ASN 546 546 546 ASN ASN D . n B 2 547 SER 547 547 547 SER SER D . n B 2 548 THR 548 548 548 THR THR D . n B 2 549 GLU 549 549 549 GLU GLU D . n B 2 550 ALA 550 550 550 ALA ALA D . n B 2 551 GLY 551 551 551 GLY GLY D . n B 2 552 GLN 552 552 552 GLN GLN D . n B 2 553 LYS 553 553 553 LYS LYS D . n B 2 554 LEU 554 554 554 LEU LEU D . n B 2 555 LEU 555 555 555 LEU LEU D . n B 2 556 LYS 556 556 556 LYS LYS D . n B 2 557 MET 557 557 557 MET MET D . n B 2 558 LEU 558 558 558 LEU LEU D . n B 2 559 SER 559 559 559 SER SER D . n B 2 560 LEU 560 560 560 LEU LEU D . n B 2 561 GLY 561 561 561 GLY GLY D . n B 2 562 ASN 562 562 562 ASN ASN D . n B 2 563 SER 563 563 563 SER SER D . n B 2 564 GLU 564 564 564 GLU GLU D . n B 2 565 PRO 565 565 565 PRO PRO D . n B 2 566 TRP 566 566 566 TRP TRP D . n B 2 567 THR 567 567 567 THR THR D . n B 2 568 LYS 568 568 568 LYS LYS D . n B 2 569 ALA 569 569 569 ALA ALA D . n B 2 570 LEU 570 570 570 LEU LEU D . n B 2 571 GLU 571 571 571 GLU GLU D . n B 2 572 ASN 572 572 572 ASN ASN D . n B 2 573 VAL 573 573 573 VAL VAL D . n B 2 574 VAL 574 574 574 VAL VAL D . n B 2 575 GLY 575 575 575 GLY GLY D . n B 2 576 ALA 576 576 576 ALA ALA D . n B 2 577 ARG 577 577 577 ARG ARG D . n B 2 578 ASN 578 578 578 ASN ASN D . n B 2 579 MET 579 579 579 MET MET D . n B 2 580 ASP 580 580 580 ASP ASP D . n B 2 581 VAL 581 581 581 VAL VAL D . n B 2 582 LYS 582 582 582 LYS LYS D . n B 2 583 PRO 583 583 583 PRO PRO D . n B 2 584 LEU 584 584 584 LEU LEU D . n B 2 585 LEU 585 585 585 LEU LEU D . n B 2 586 ASN 586 586 586 ASN ASN D . n B 2 587 TYR 587 587 587 TYR TYR D . n B 2 588 PHE 588 588 588 PHE PHE D . n B 2 589 GLN 589 589 589 GLN GLN D . n B 2 590 PRO 590 590 590 PRO PRO D . n B 2 591 LEU 591 591 591 LEU LEU D . n B 2 592 PHE 592 592 592 PHE PHE D . n B 2 593 ASP 593 593 593 ASP ASP D . n B 2 594 TRP 594 594 594 TRP TRP D . n B 2 595 LEU 595 595 595 LEU LEU D . n B 2 596 LYS 596 596 596 LYS LYS D . n B 2 597 GLU 597 597 597 GLU GLU D . n B 2 598 GLN 598 598 598 GLN GLN D . n B 2 599 ASN 599 599 599 ASN ASN D . n B 2 600 ARG 600 600 600 ARG ARG D . n B 2 601 ASN 601 601 601 ASN ASN D . n B 2 602 SER 602 602 602 SER SER D . n B 2 603 PHE 603 603 603 PHE PHE D . n B 2 604 VAL 604 604 604 VAL VAL D . n B 2 605 GLY 605 605 605 GLY GLY D . n B 2 606 TRP 606 606 606 TRP TRP D . n B 2 607 ASN 607 607 607 ASN ASN D . n B 2 608 THR 608 608 608 THR THR D . n B 2 609 GLU 609 609 609 GLU GLU D . n B 2 610 TRP 610 610 610 TRP TRP D . n B 2 611 SER 611 611 611 SER SER D . n B 2 612 PRO 612 612 612 PRO PRO D . n B 2 613 TYR 613 613 ? ? ? D . n B 2 614 ALA 614 614 ? ? ? D . n B 2 615 ASP 615 615 ? ? ? D . n B 2 616 HIS 616 616 ? ? ? D . n B 2 617 HIS 617 617 ? ? ? D . n B 2 618 HIS 618 618 ? ? ? D . n B 2 619 HIS 619 619 ? ? ? D . n B 2 620 HIS 620 620 ? ? ? D . n B 2 621 HIS 621 621 ? ? ? D . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 B NAG 1 D NAG 1053 n C 3 NAG 2 B NAG 2 D NAG 1054 n D 4 NAG 1 C NAG 1 D NAG 1546 n D 4 NAG 2 C NAG 2 D NAG 1547 n D 4 BMA 3 C BMA 3 D BMA 1548 n # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 5 _pdbx_nonpoly_scheme.mon_id NAG _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 531 _pdbx_nonpoly_scheme.pdb_mon_id NAG _pdbx_nonpoly_scheme.auth_mon_id NAG _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8VKN _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8VKN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8VKN _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 111.09 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8VKN _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0059 ? 6692 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.9319 ? 9092 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.0562 ? 963 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.0075 ? 1172 ? f_plane_restr ? ? 'ELECTRON MICROSCOPY' ? 13.3786 ? 2443 ? f_dihedral_angle_d ? ? # _struct.entry_id 8VKN _struct.title 'Cryo-EM structure of SARS-CoV-2 XBB.1.5 spike protein in complex with mouse ACE2 (focused refinement of RBD and mouse ACE2)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8VKN _struct_keywords.text 'Complex, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_SARS2 P0DTC2 ? 1 ;VRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDE VRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGF NCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; 327 2 UNP ACE2_MOUSE Q8R0I0 ? 2 ;MSSSSWLLLSLVAVTTAQSLTEENAKTFLNNFNQEAEDLSYQSSLASWNYNTNITEENAQKMSEAAAKWSAFYEEQSKTA QSFSLQEIQTPIIKRQLQALQQSGSSALSADKNKQLNTILNTMSTIYSTGKVCNPKNPQECLLLEPGLDEIMATSTDYNS RLWAWEGWRAEVGKQLRPLYEEYVVLKNEMARANNYNDYGDYWRGDYEAEGADGYNYNRNQLIEDVERTFAEIKPLYEHL HAYVRRKLMDTYPSYISPTGCLPAHLLGDMWGRFWTNLYPLTVPFAQKPNIDVTDAMMNQGWDAERIFQEAEKFFVSVGL PHMTQGFWANSMLTEPADGRKVVCHPTAWDLGHGDFRIKMCTKVTMDNFLTAHHEMGHIQYDMAYARQPFLLRNGANEGF HEAVGEIMSLSAATPKHLKSIGLLPSDFQEDSETEINFLLKQALTIVGTLPFTYMLEKWRWMVFRGEIPKEQWMKKWWEM KREIVGVVEPLPHDETYCDPASLFHVSNDYSFIRYYTRTIYQFQFQEALCQAAKYNGSLHKCDISNSTEAGQKLLKMLSL GNSEPWTKALENVVGARNMDVKPLLNYFQPLFDWLKEQNRNSFVGWNTEWSPYAD ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8VKN A 1 ? 198 ? P0DTC2 327 ? 527 ? ? 527 2 2 8VKN D 1 ? 615 ? Q8R0I0 1 ? 615 ? 1 615 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8VKN ? A ? ? UNP P0DTC2 VAL 327 deletion ? 1 1 8VKN ? A ? ? UNP P0DTC2 ARG 328 deletion ? 2 1 8VKN ? A ? ? UNP P0DTC2 PHE 329 deletion ? 3 1 8VKN HIS A 10 ? UNP P0DTC2 GLY 339 conflict 339 4 1 8VKN THR A 17 ? UNP P0DTC2 ARG 346 conflict 346 5 1 8VKN ILE A 39 ? UNP P0DTC2 LEU 368 conflict 368 6 1 8VKN PHE A 42 ? UNP P0DTC2 SER 371 conflict 371 7 1 8VKN PRO A 44 ? UNP P0DTC2 SER 373 conflict 373 8 1 8VKN PHE A 46 ? UNP P0DTC2 SER 375 conflict 375 9 1 8VKN ALA A 47 ? UNP P0DTC2 THR 376 conflict 376 10 1 8VKN ASN A 76 ? UNP P0DTC2 ASP 405 conflict 405 11 1 8VKN SER A 79 ? UNP P0DTC2 ARG 408 conflict 408 12 1 8VKN ASN A 88 ? UNP P0DTC2 LYS 417 conflict 417 13 1 8VKN LYS A 111 ? UNP P0DTC2 ASN 440 conflict 440 14 1 8VKN PRO A 116 ? UNP P0DTC2 VAL 445 conflict 445 15 1 8VKN SER A 117 ? UNP P0DTC2 GLY 446 conflict 446 16 1 8VKN LYS A 131 ? UNP P0DTC2 ASN 460 conflict 460 17 1 8VKN ASN A 148 ? UNP P0DTC2 SER 477 conflict 477 18 1 8VKN LYS A 149 ? UNP P0DTC2 THR 478 conflict 478 19 1 8VKN ALA A 155 ? UNP P0DTC2 GLU 484 conflict 484 20 1 8VKN PRO A 157 ? UNP P0DTC2 PHE 486 conflict 486 21 1 8VKN SER A 161 ? UNP P0DTC2 PHE 490 conflict 490 22 1 8VKN ARG A 169 ? UNP P0DTC2 GLN 498 conflict 498 23 1 8VKN TYR A 172 ? UNP P0DTC2 ASN 501 conflict 501 24 1 8VKN HIS A 176 ? UNP P0DTC2 TYR 505 conflict 505 25 1 8VKN LYS A 199 ? UNP P0DTC2 ? ? 'expression tag' 528 26 1 8VKN LYS A 200 ? UNP P0DTC2 ? ? 'expression tag' 529 27 1 8VKN SER A 201 ? UNP P0DTC2 ? ? 'expression tag' 530 28 2 8VKN HIS D 616 ? UNP Q8R0I0 ? ? 'expression tag' 616 29 2 8VKN HIS D 617 ? UNP Q8R0I0 ? ? 'expression tag' 617 30 2 8VKN HIS D 618 ? UNP Q8R0I0 ? ? 'expression tag' 618 31 2 8VKN HIS D 619 ? UNP Q8R0I0 ? ? 'expression tag' 619 32 2 8VKN HIS D 620 ? UNP Q8R0I0 ? ? 'expression tag' 620 33 2 8VKN HIS D 621 ? UNP Q8R0I0 ? ? 'expression tag' 621 34 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 35 ? ASN A 41 ? ASP A 364 ASN A 370 1 ? 7 HELX_P HELX_P2 AA2 ASN A 76 ? ILE A 81 ? ASN A 405 ILE A 410 5 ? 6 HELX_P HELX_P3 AA3 GLY A 87 ? ASN A 93 ? GLY A 416 ASN A 422 1 ? 7 HELX_P HELX_P4 AA4 SER A 109 ? SER A 114 ? SER A 438 SER A 443 1 ? 6 HELX_P HELX_P5 AA5 THR B 21 ? THR B 52 ? THR D 21 THR D 52 1 ? 32 HELX_P HELX_P6 AA6 THR B 55 ? GLN B 81 ? THR D 55 GLN D 81 1 ? 27 HELX_P HELX_P7 AA7 SER B 82 ? PHE B 83 ? SER D 82 PHE D 83 5 ? 2 HELX_P HELX_P8 AA8 SER B 84 ? ILE B 88 ? SER D 84 ILE D 88 5 ? 5 HELX_P HELX_P9 AA9 THR B 90 ? GLN B 101 ? THR D 90 GLN D 101 1 ? 12 HELX_P HELX_P10 AB1 SER B 103 ? LEU B 108 ? SER D 103 LEU D 108 5 ? 6 HELX_P HELX_P11 AB2 SER B 109 ? SER B 128 ? SER D 109 SER D 128 1 ? 20 HELX_P HELX_P12 AB3 GLY B 147 ? SER B 155 ? GLY D 147 SER D 155 1 ? 9 HELX_P HELX_P13 AB4 ASP B 157 ? ASN B 194 ? ASP D 157 ASN D 194 1 ? 38 HELX_P HELX_P14 AB5 ASP B 198 ? GLY B 205 ? ASP D 198 GLY D 205 1 ? 8 HELX_P HELX_P15 AB6 ASN B 218 ? ALA B 231 ? ASN D 218 ALA D 231 1 ? 14 HELX_P HELX_P16 AB7 ILE B 233 ? TYR B 252 ? ILE D 233 TYR D 252 1 ? 20 HELX_P HELX_P17 AB8 TRP B 275 ? TYR B 279 ? TRP D 275 TYR D 279 5 ? 5 HELX_P HELX_P18 AB9 VAL B 293 ? GLN B 300 ? VAL D 293 GLN D 300 1 ? 8 HELX_P HELX_P19 AC1 ASP B 303 ? VAL B 318 ? ASP D 303 VAL D 318 1 ? 16 HELX_P HELX_P20 AC2 THR B 324 ? SER B 331 ? THR D 324 SER D 331 1 ? 8 HELX_P HELX_P21 AC3 THR B 365 ? TYR B 385 ? THR D 365 TYR D 385 1 ? 21 HELX_P HELX_P22 AC4 ALA B 386 ? GLN B 388 ? ALA D 386 GLN D 388 5 ? 3 HELX_P HELX_P23 AC5 PRO B 389 ? ARG B 393 ? PRO D 389 ARG D 393 5 ? 5 HELX_P HELX_P24 AC6 GLY B 399 ? ALA B 413 ? GLY D 399 ALA D 413 1 ? 15 HELX_P HELX_P25 AC7 THR B 414 ? ILE B 421 ? THR D 414 ILE D 421 1 ? 8 HELX_P HELX_P26 AC8 ASP B 431 ? VAL B 447 ? ASP D 431 VAL D 447 1 ? 17 HELX_P HELX_P27 AC9 GLY B 448 ? ARG B 465 ? GLY D 448 ARG D 465 1 ? 18 HELX_P HELX_P28 AD1 PRO B 469 ? GLU B 471 ? PRO D 469 GLU D 471 5 ? 3 HELX_P HELX_P29 AD2 GLN B 472 ? ILE B 484 ? GLN D 472 ILE D 484 1 ? 13 HELX_P HELX_P30 AD3 ASP B 499 ? SER B 502 ? ASP D 499 SER D 502 5 ? 4 HELX_P HELX_P31 AD4 LEU B 503 ? ASN B 508 ? LEU D 503 ASN D 508 1 ? 6 HELX_P HELX_P32 AD5 PHE B 512 ? ALA B 533 ? PHE D 512 ALA D 533 1 ? 22 HELX_P HELX_P33 AD6 SER B 538 ? CYS B 542 ? SER D 538 CYS D 542 5 ? 5 HELX_P HELX_P34 AD7 SER B 547 ? SER B 559 ? SER D 547 SER D 559 1 ? 13 HELX_P HELX_P35 AD8 PRO B 565 ? GLY B 575 ? PRO D 565 GLY D 575 1 ? 11 HELX_P HELX_P36 AD9 VAL B 581 ? PHE B 588 ? VAL D 581 PHE D 588 1 ? 8 HELX_P HELX_P37 AE1 PHE B 588 ? GLN B 598 ? PHE D 588 GLN D 598 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 32 SG ? ? A CYS 336 A CYS 361 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf2 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 103 SG ? ? A CYS 379 A CYS 432 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? A CYS 62 SG ? ? ? 1_555 A CYS 196 SG ? ? A CYS 391 A CYS 525 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf4 disulf ? ? A CYS 151 SG ? ? ? 1_555 A CYS 159 SG ? ? A CYS 480 A CYS 488 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf5 disulf ? ? B CYS 133 SG ? ? ? 1_555 B CYS 141 SG ? ? D CYS 133 D CYS 141 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf6 disulf ? ? B CYS 530 SG ? ? ? 1_555 B CYS 542 SG ? ? D CYS 530 D CYS 542 1_555 ? ? ? ? ? ? ? 2.027 ? ? covale1 covale one ? A ASN 14 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 343 A NAG 601 1_555 ? ? ? ? ? ? ? 1.451 ? N-Glycosylation covale2 covale one ? B ASN 53 ND2 ? ? ? 1_555 C NAG . C1 ? ? D ASN 53 B NAG 1 1_555 ? ? ? ? ? ? ? 1.432 ? N-Glycosylation covale3 covale one ? B ASN 546 ND2 ? ? ? 1_555 D NAG . C1 ? ? D ASN 546 C NAG 1 1_555 ? ? ? ? ? ? ? 1.431 ? N-Glycosylation covale4 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.448 ? ? covale5 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.445 ? ? covale6 covale both ? D NAG . O4 ? ? ? 1_555 D BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.444 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 2 ? AA6 ? 2 ? AA7 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? parallel AA7 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 25 ? ILE A 29 ? ASN A 354 ILE A 358 AA1 2 ASN A 65 ? ARG A 74 ? ASN A 394 ARG A 403 AA1 3 PRO A 178 ? GLU A 187 ? PRO A 507 GLU A 516 AA1 4 GLY A 102 ? ASN A 108 ? GLY A 431 ASN A 437 AA1 5 CYS A 50 ? TYR A 51 ? CYS A 379 TYR A 380 AA2 1 CYS A 32 ? VAL A 33 ? CYS A 361 VAL A 362 AA2 2 VAL A 195 ? CYS A 196 ? VAL A 524 CYS A 525 AA3 1 LEU A 123 ? ARG A 125 ? LEU A 452 ARG A 454 AA3 2 LEU A 163 ? SER A 165 ? LEU A 492 SER A 494 AA4 1 TYR A 144 ? GLN A 145 ? TYR A 473 GLN A 474 AA4 2 CYS A 159 ? TYR A 160 ? CYS A 488 TYR A 489 AA5 1 LYS B 131 ? CYS B 133 ? LYS D 131 CYS D 133 AA5 2 CYS B 141 ? LEU B 143 ? CYS D 141 LEU D 143 AA6 1 LEU B 262 ? PRO B 263 ? LEU D 262 PRO D 263 AA6 2 VAL B 487 ? VAL B 488 ? VAL D 487 VAL D 488 AA7 1 THR B 347 ? GLY B 352 ? THR D 347 GLY D 352 AA7 2 ASP B 355 ? LYS B 359 ? ASP D 355 LYS D 359 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 27 ? N LYS A 356 O ALA A 68 ? O ALA A 397 AA1 2 3 N ILE A 73 ? N ILE A 402 O TYR A 179 ? O TYR A 508 AA1 3 4 O VAL A 182 ? O VAL A 511 N ILE A 105 ? N ILE A 434 AA1 4 5 O GLY A 102 ? O GLY A 431 N TYR A 51 ? N TYR A 380 AA2 1 2 N CYS A 32 ? N CYS A 361 O CYS A 196 ? O CYS A 525 AA3 1 2 N TYR A 124 ? N TYR A 453 O GLN A 164 ? O GLN A 493 AA4 1 2 N TYR A 144 ? N TYR A 473 O TYR A 160 ? O TYR A 489 AA5 1 2 N VAL B 132 ? N VAL D 132 O LEU B 142 ? O LEU D 142 AA6 1 2 N LEU B 262 ? N LEU D 262 O VAL B 488 ? O VAL D 488 AA7 1 2 N THR B 347 ? N THR D 347 O LYS B 359 ? O LYS D 359 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 343 ? ? -156.35 59.76 2 1 ALA A 352 ? ? -104.32 63.21 3 1 ASN A 370 ? ? -98.82 41.68 4 1 ALA A 372 ? ? 175.38 166.08 5 1 ASN A 422 ? ? -123.88 -53.72 6 1 ASP A 428 ? ? -109.83 45.18 7 1 LEU A 518 ? ? -122.86 -168.64 8 1 ASN D 53 ? ? -161.84 56.96 9 1 LYS D 136 ? ? 76.31 -8.37 10 1 ASP D 509 ? ? 60.33 63.13 11 1 SER D 547 ? ? -150.64 64.02 # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # _pdbx_entry_details.entry_id 8VKN _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8VKN _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8VKN _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.93 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 154753 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'SARS-CoV-2 XBB.1.5 spike protein RBD bound to mouse ACE2' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2' # _em_imaging.entry_id 8VKN _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8VKN _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8VKN _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D MET 1 ? B MET 1 2 1 Y 1 D SER 2 ? B SER 2 3 1 Y 1 D SER 3 ? B SER 3 4 1 Y 1 D SER 4 ? B SER 4 5 1 Y 1 D SER 5 ? B SER 5 6 1 Y 1 D TRP 6 ? B TRP 6 7 1 Y 1 D LEU 7 ? B LEU 7 8 1 Y 1 D LEU 8 ? B LEU 8 9 1 Y 1 D LEU 9 ? B LEU 9 10 1 Y 1 D SER 10 ? B SER 10 11 1 Y 1 D LEU 11 ? B LEU 11 12 1 Y 1 D VAL 12 ? B VAL 12 13 1 Y 1 D ALA 13 ? B ALA 13 14 1 Y 1 D VAL 14 ? B VAL 14 15 1 Y 1 D THR 15 ? B THR 15 16 1 Y 1 D THR 16 ? B THR 16 17 1 Y 1 D ALA 17 ? B ALA 17 18 1 Y 1 D GLN 18 ? B GLN 18 19 1 Y 1 D SER 19 ? B SER 19 20 1 Y 1 D TYR 613 ? B TYR 613 21 1 Y 1 D ALA 614 ? B ALA 614 22 1 Y 1 D ASP 615 ? B ASP 615 23 1 Y 1 D HIS 616 ? B HIS 616 24 1 Y 1 D HIS 617 ? B HIS 617 25 1 Y 1 D HIS 618 ? B HIS 618 26 1 Y 1 D HIS 619 ? B HIS 619 27 1 Y 1 D HIS 620 ? B HIS 620 28 1 Y 1 D HIS 621 ? B HIS 621 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 ILE N N N N 182 ILE CA C N S 183 ILE C C N N 184 ILE O O N N 185 ILE CB C N S 186 ILE CG1 C N N 187 ILE CG2 C N N 188 ILE CD1 C N N 189 ILE OXT O N N 190 ILE H H N N 191 ILE H2 H N N 192 ILE HA H N N 193 ILE HB H N N 194 ILE HG12 H N N 195 ILE HG13 H N N 196 ILE HG21 H N N 197 ILE HG22 H N N 198 ILE HG23 H N N 199 ILE HD11 H N N 200 ILE HD12 H N N 201 ILE HD13 H N N 202 ILE HXT H N N 203 LEU N N N N 204 LEU CA C N S 205 LEU C C N N 206 LEU O O N N 207 LEU CB C N N 208 LEU CG C N N 209 LEU CD1 C N N 210 LEU CD2 C N N 211 LEU OXT O N N 212 LEU H H N N 213 LEU H2 H N N 214 LEU HA H N N 215 LEU HB2 H N N 216 LEU HB3 H N N 217 LEU HG H N N 218 LEU HD11 H N N 219 LEU HD12 H N N 220 LEU HD13 H N N 221 LEU HD21 H N N 222 LEU HD22 H N N 223 LEU HD23 H N N 224 LEU HXT H N N 225 LYS N N N N 226 LYS CA C N S 227 LYS C C N N 228 LYS O O N N 229 LYS CB C N N 230 LYS CG C N N 231 LYS CD C N N 232 LYS CE C N N 233 LYS NZ N N N 234 LYS OXT O N N 235 LYS H H N N 236 LYS H2 H N N 237 LYS HA H N N 238 LYS HB2 H N N 239 LYS HB3 H N N 240 LYS HG2 H N N 241 LYS HG3 H N N 242 LYS HD2 H N N 243 LYS HD3 H N N 244 LYS HE2 H N N 245 LYS HE3 H N N 246 LYS HZ1 H N N 247 LYS HZ2 H N N 248 LYS HZ3 H N N 249 LYS HXT H N N 250 MET N N N N 251 MET CA C N S 252 MET C C N N 253 MET O O N N 254 MET CB C N N 255 MET CG C N N 256 MET SD S N N 257 MET CE C N N 258 MET OXT O N N 259 MET H H N N 260 MET H2 H N N 261 MET HA H N N 262 MET HB2 H N N 263 MET HB3 H N N 264 MET HG2 H N N 265 MET HG3 H N N 266 MET HE1 H N N 267 MET HE2 H N N 268 MET HE3 H N N 269 MET HXT H N N 270 NAG C1 C N R 271 NAG C2 C N R 272 NAG C3 C N R 273 NAG C4 C N S 274 NAG C5 C N R 275 NAG C6 C N N 276 NAG C7 C N N 277 NAG C8 C N N 278 NAG N2 N N N 279 NAG O1 O N N 280 NAG O3 O N N 281 NAG O4 O N N 282 NAG O5 O N N 283 NAG O6 O N N 284 NAG O7 O N N 285 NAG H1 H N N 286 NAG H2 H N N 287 NAG H3 H N N 288 NAG H4 H N N 289 NAG H5 H N N 290 NAG H61 H N N 291 NAG H62 H N N 292 NAG H81 H N N 293 NAG H82 H N N 294 NAG H83 H N N 295 NAG HN2 H N N 296 NAG HO1 H N N 297 NAG HO3 H N N 298 NAG HO4 H N N 299 NAG HO6 H N N 300 PHE N N N N 301 PHE CA C N S 302 PHE C C N N 303 PHE O O N N 304 PHE CB C N N 305 PHE CG C Y N 306 PHE CD1 C Y N 307 PHE CD2 C Y N 308 PHE CE1 C Y N 309 PHE CE2 C Y N 310 PHE CZ C Y N 311 PHE OXT O N N 312 PHE H H N N 313 PHE H2 H N N 314 PHE HA H N N 315 PHE HB2 H N N 316 PHE HB3 H N N 317 PHE HD1 H N N 318 PHE HD2 H N N 319 PHE HE1 H N N 320 PHE HE2 H N N 321 PHE HZ H N N 322 PHE HXT H N N 323 PRO N N N N 324 PRO CA C N S 325 PRO C C N N 326 PRO O O N N 327 PRO CB C N N 328 PRO CG C N N 329 PRO CD C N N 330 PRO OXT O N N 331 PRO H H N N 332 PRO HA H N N 333 PRO HB2 H N N 334 PRO HB3 H N N 335 PRO HG2 H N N 336 PRO HG3 H N N 337 PRO HD2 H N N 338 PRO HD3 H N N 339 PRO HXT H N N 340 SER N N N N 341 SER CA C N S 342 SER C C N N 343 SER O O N N 344 SER CB C N N 345 SER OG O N N 346 SER OXT O N N 347 SER H H N N 348 SER H2 H N N 349 SER HA H N N 350 SER HB2 H N N 351 SER HB3 H N N 352 SER HG H N N 353 SER HXT H N N 354 THR N N N N 355 THR CA C N S 356 THR C C N N 357 THR O O N N 358 THR CB C N R 359 THR OG1 O N N 360 THR CG2 C N N 361 THR OXT O N N 362 THR H H N N 363 THR H2 H N N 364 THR HA H N N 365 THR HB H N N 366 THR HG1 H N N 367 THR HG21 H N N 368 THR HG22 H N N 369 THR HG23 H N N 370 THR HXT H N N 371 TRP N N N N 372 TRP CA C N S 373 TRP C C N N 374 TRP O O N N 375 TRP CB C N N 376 TRP CG C Y N 377 TRP CD1 C Y N 378 TRP CD2 C Y N 379 TRP NE1 N Y N 380 TRP CE2 C Y N 381 TRP CE3 C Y N 382 TRP CZ2 C Y N 383 TRP CZ3 C Y N 384 TRP CH2 C Y N 385 TRP OXT O N N 386 TRP H H N N 387 TRP H2 H N N 388 TRP HA H N N 389 TRP HB2 H N N 390 TRP HB3 H N N 391 TRP HD1 H N N 392 TRP HE1 H N N 393 TRP HE3 H N N 394 TRP HZ2 H N N 395 TRP HZ3 H N N 396 TRP HH2 H N N 397 TRP HXT H N N 398 TYR N N N N 399 TYR CA C N S 400 TYR C C N N 401 TYR O O N N 402 TYR CB C N N 403 TYR CG C Y N 404 TYR CD1 C Y N 405 TYR CD2 C Y N 406 TYR CE1 C Y N 407 TYR CE2 C Y N 408 TYR CZ C Y N 409 TYR OH O N N 410 TYR OXT O N N 411 TYR H H N N 412 TYR H2 H N N 413 TYR HA H N N 414 TYR HB2 H N N 415 TYR HB3 H N N 416 TYR HD1 H N N 417 TYR HD2 H N N 418 TYR HE1 H N N 419 TYR HE2 H N N 420 TYR HH H N N 421 TYR HXT H N N 422 VAL N N N N 423 VAL CA C N S 424 VAL C C N N 425 VAL O O N N 426 VAL CB C N N 427 VAL CG1 C N N 428 VAL CG2 C N N 429 VAL OXT O N N 430 VAL H H N N 431 VAL H2 H N N 432 VAL HA H N N 433 VAL HB H N N 434 VAL HG11 H N N 435 VAL HG12 H N N 436 VAL HG13 H N N 437 VAL HG21 H N N 438 VAL HG22 H N N 439 VAL HG23 H N N 440 VAL HXT H N N 441 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 ILE N CA sing N N 174 ILE N H sing N N 175 ILE N H2 sing N N 176 ILE CA C sing N N 177 ILE CA CB sing N N 178 ILE CA HA sing N N 179 ILE C O doub N N 180 ILE C OXT sing N N 181 ILE CB CG1 sing N N 182 ILE CB CG2 sing N N 183 ILE CB HB sing N N 184 ILE CG1 CD1 sing N N 185 ILE CG1 HG12 sing N N 186 ILE CG1 HG13 sing N N 187 ILE CG2 HG21 sing N N 188 ILE CG2 HG22 sing N N 189 ILE CG2 HG23 sing N N 190 ILE CD1 HD11 sing N N 191 ILE CD1 HD12 sing N N 192 ILE CD1 HD13 sing N N 193 ILE OXT HXT sing N N 194 LEU N CA sing N N 195 LEU N H sing N N 196 LEU N H2 sing N N 197 LEU CA C sing N N 198 LEU CA CB sing N N 199 LEU CA HA sing N N 200 LEU C O doub N N 201 LEU C OXT sing N N 202 LEU CB CG sing N N 203 LEU CB HB2 sing N N 204 LEU CB HB3 sing N N 205 LEU CG CD1 sing N N 206 LEU CG CD2 sing N N 207 LEU CG HG sing N N 208 LEU CD1 HD11 sing N N 209 LEU CD1 HD12 sing N N 210 LEU CD1 HD13 sing N N 211 LEU CD2 HD21 sing N N 212 LEU CD2 HD22 sing N N 213 LEU CD2 HD23 sing N N 214 LEU OXT HXT sing N N 215 LYS N CA sing N N 216 LYS N H sing N N 217 LYS N H2 sing N N 218 LYS CA C sing N N 219 LYS CA CB sing N N 220 LYS CA HA sing N N 221 LYS C O doub N N 222 LYS C OXT sing N N 223 LYS CB CG sing N N 224 LYS CB HB2 sing N N 225 LYS CB HB3 sing N N 226 LYS CG CD sing N N 227 LYS CG HG2 sing N N 228 LYS CG HG3 sing N N 229 LYS CD CE sing N N 230 LYS CD HD2 sing N N 231 LYS CD HD3 sing N N 232 LYS CE NZ sing N N 233 LYS CE HE2 sing N N 234 LYS CE HE3 sing N N 235 LYS NZ HZ1 sing N N 236 LYS NZ HZ2 sing N N 237 LYS NZ HZ3 sing N N 238 LYS OXT HXT sing N N 239 MET N CA sing N N 240 MET N H sing N N 241 MET N H2 sing N N 242 MET CA C sing N N 243 MET CA CB sing N N 244 MET CA HA sing N N 245 MET C O doub N N 246 MET C OXT sing N N 247 MET CB CG sing N N 248 MET CB HB2 sing N N 249 MET CB HB3 sing N N 250 MET CG SD sing N N 251 MET CG HG2 sing N N 252 MET CG HG3 sing N N 253 MET SD CE sing N N 254 MET CE HE1 sing N N 255 MET CE HE2 sing N N 256 MET CE HE3 sing N N 257 MET OXT HXT sing N N 258 NAG C1 C2 sing N N 259 NAG C1 O1 sing N N 260 NAG C1 O5 sing N N 261 NAG C1 H1 sing N N 262 NAG C2 C3 sing N N 263 NAG C2 N2 sing N N 264 NAG C2 H2 sing N N 265 NAG C3 C4 sing N N 266 NAG C3 O3 sing N N 267 NAG C3 H3 sing N N 268 NAG C4 C5 sing N N 269 NAG C4 O4 sing N N 270 NAG C4 H4 sing N N 271 NAG C5 C6 sing N N 272 NAG C5 O5 sing N N 273 NAG C5 H5 sing N N 274 NAG C6 O6 sing N N 275 NAG C6 H61 sing N N 276 NAG C6 H62 sing N N 277 NAG C7 C8 sing N N 278 NAG C7 N2 sing N N 279 NAG C7 O7 doub N N 280 NAG C8 H81 sing N N 281 NAG C8 H82 sing N N 282 NAG C8 H83 sing N N 283 NAG N2 HN2 sing N N 284 NAG O1 HO1 sing N N 285 NAG O3 HO3 sing N N 286 NAG O4 HO4 sing N N 287 NAG O6 HO6 sing N N 288 PHE N CA sing N N 289 PHE N H sing N N 290 PHE N H2 sing N N 291 PHE CA C sing N N 292 PHE CA CB sing N N 293 PHE CA HA sing N N 294 PHE C O doub N N 295 PHE C OXT sing N N 296 PHE CB CG sing N N 297 PHE CB HB2 sing N N 298 PHE CB HB3 sing N N 299 PHE CG CD1 doub Y N 300 PHE CG CD2 sing Y N 301 PHE CD1 CE1 sing Y N 302 PHE CD1 HD1 sing N N 303 PHE CD2 CE2 doub Y N 304 PHE CD2 HD2 sing N N 305 PHE CE1 CZ doub Y N 306 PHE CE1 HE1 sing N N 307 PHE CE2 CZ sing Y N 308 PHE CE2 HE2 sing N N 309 PHE CZ HZ sing N N 310 PHE OXT HXT sing N N 311 PRO N CA sing N N 312 PRO N CD sing N N 313 PRO N H sing N N 314 PRO CA C sing N N 315 PRO CA CB sing N N 316 PRO CA HA sing N N 317 PRO C O doub N N 318 PRO C OXT sing N N 319 PRO CB CG sing N N 320 PRO CB HB2 sing N N 321 PRO CB HB3 sing N N 322 PRO CG CD sing N N 323 PRO CG HG2 sing N N 324 PRO CG HG3 sing N N 325 PRO CD HD2 sing N N 326 PRO CD HD3 sing N N 327 PRO OXT HXT sing N N 328 SER N CA sing N N 329 SER N H sing N N 330 SER N H2 sing N N 331 SER CA C sing N N 332 SER CA CB sing N N 333 SER CA HA sing N N 334 SER C O doub N N 335 SER C OXT sing N N 336 SER CB OG sing N N 337 SER CB HB2 sing N N 338 SER CB HB3 sing N N 339 SER OG HG sing N N 340 SER OXT HXT sing N N 341 THR N CA sing N N 342 THR N H sing N N 343 THR N H2 sing N N 344 THR CA C sing N N 345 THR CA CB sing N N 346 THR CA HA sing N N 347 THR C O doub N N 348 THR C OXT sing N N 349 THR CB OG1 sing N N 350 THR CB CG2 sing N N 351 THR CB HB sing N N 352 THR OG1 HG1 sing N N 353 THR CG2 HG21 sing N N 354 THR CG2 HG22 sing N N 355 THR CG2 HG23 sing N N 356 THR OXT HXT sing N N 357 TRP N CA sing N N 358 TRP N H sing N N 359 TRP N H2 sing N N 360 TRP CA C sing N N 361 TRP CA CB sing N N 362 TRP CA HA sing N N 363 TRP C O doub N N 364 TRP C OXT sing N N 365 TRP CB CG sing N N 366 TRP CB HB2 sing N N 367 TRP CB HB3 sing N N 368 TRP CG CD1 doub Y N 369 TRP CG CD2 sing Y N 370 TRP CD1 NE1 sing Y N 371 TRP CD1 HD1 sing N N 372 TRP CD2 CE2 doub Y N 373 TRP CD2 CE3 sing Y N 374 TRP NE1 CE2 sing Y N 375 TRP NE1 HE1 sing N N 376 TRP CE2 CZ2 sing Y N 377 TRP CE3 CZ3 doub Y N 378 TRP CE3 HE3 sing N N 379 TRP CZ2 CH2 doub Y N 380 TRP CZ2 HZ2 sing N N 381 TRP CZ3 CH2 sing Y N 382 TRP CZ3 HZ3 sing N N 383 TRP CH2 HH2 sing N N 384 TRP OXT HXT sing N N 385 TYR N CA sing N N 386 TYR N H sing N N 387 TYR N H2 sing N N 388 TYR CA C sing N N 389 TYR CA CB sing N N 390 TYR CA HA sing N N 391 TYR C O doub N N 392 TYR C OXT sing N N 393 TYR CB CG sing N N 394 TYR CB HB2 sing N N 395 TYR CB HB3 sing N N 396 TYR CG CD1 doub Y N 397 TYR CG CD2 sing Y N 398 TYR CD1 CE1 sing Y N 399 TYR CD1 HD1 sing N N 400 TYR CD2 CE2 doub Y N 401 TYR CD2 HD2 sing N N 402 TYR CE1 CZ doub Y N 403 TYR CE1 HE1 sing N N 404 TYR CE2 CZ sing Y N 405 TYR CE2 HE2 sing N N 406 TYR CZ OH sing N N 407 TYR OH HH sing N N 408 TYR OXT HXT sing N N 409 VAL N CA sing N N 410 VAL N H sing N N 411 VAL N H2 sing N N 412 VAL CA C sing N N 413 VAL CA CB sing N N 414 VAL CA HA sing N N 415 VAL C O doub N N 416 VAL C OXT sing N N 417 VAL CB CG1 sing N N 418 VAL CB CG2 sing N N 419 VAL CB HB sing N N 420 VAL CG1 HG11 sing N N 421 VAL CG1 HG12 sing N N 422 VAL CG1 HG13 sing N N 423 VAL CG2 HG21 sing N N 424 VAL CG2 HG22 sing N N 425 VAL CG2 HG23 sing N N 426 VAL OXT HXT sing N N 427 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 2697049 _em_entity_assembly_naturalsource.organism 'Severe acute respiratory syndrome coronavirus 2' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Canada Excellence Research Chair Award' _pdbx_audit_support.country Canada _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NAG 2 n 4 NAG 1 n 4 NAG 2 n 4 BMA 3 n # _space_group.crystal_system triclinic _space_group.name_H-M_alt 'P 1' _space_group.IT_number 1 _space_group.name_Hall 'P 1' _space_group.id 1 # _atom_sites.entry_id 8VKN _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_