HEADER ANTIFUNGAL PROTEIN 11-JAN-24 8VLK TITLE CRYSTAL STRUCTURE OF THE YEAST CYTOSINE DEAMINASE CONTAINING BOTH OPEN TITLE 2 AND CLOSED ACTIVE SITES COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOSINE DEAMINASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: YCD,CYTOSINE AMINOHYDROLASE,FLUOROCYTOSINE RESISTANCE COMPND 5 PROTEIN 1; COMPND 6 EC: 3.5.4.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BREWER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: FCY1, YPR062W, YP9499.17; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CYTOSINE DEAMINASE, RESISTANCE, HETERODIMER, ANTIFUNGAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.-E.PICARD,J.GRENIER,P.C.DESPRES,A.K.DUBE,C.R.LANDRY,R.SHI REVDAT 3 04-SEP-24 8VLK 1 JRNL REVDAT 2 28-AUG-24 8VLK 1 JRNL REVDAT 1 21-AUG-24 8VLK 0 JRNL AUTH P.C.DESPRES,A.K.DUBE,M.E.PICARD,J.GRENIER,R.SHI,C.R.LANDRY JRNL TITL COMPENSATORY MUTATIONS POTENTIATE CONSTRUCTIVE NEUTRAL JRNL TITL 2 EVOLUTION BY GENE DUPLICATION. JRNL REF SCIENCE V. 385 770 2024 JRNL REFN ESSN 1095-9203 JRNL PMID 39146405 JRNL DOI 10.1126/SCIENCE.ADO5719 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.74 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 55849 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2895 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.81 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4075 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.01 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE SET COUNT : 211 REMARK 3 BIN FREE R VALUE : 0.2990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4745 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 411 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.61000 REMARK 3 B22 (A**2) : 0.10000 REMARK 3 B33 (A**2) : 0.96000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.112 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.107 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.083 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.748 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4883 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4540 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6547 ; 1.608 ; 1.649 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10575 ; 1.467 ; 1.590 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 615 ; 6.259 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 256 ;33.765 ;22.813 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 906 ;15.323 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;14.104 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 610 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5487 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 998 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2448 ; 2.178 ; 2.550 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2446 ; 2.175 ; 2.547 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3055 ; 2.943 ; 3.810 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3055 ; 2.944 ; 3.810 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2435 ; 3.468 ; 3.011 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2428 ; 3.452 ; 3.003 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3477 ; 5.179 ; 4.318 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5738 ; 6.294 ;31.268 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5666 ; 6.258 ;31.016 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8VLK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1000280518. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-OCT-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.27899 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58759 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 94.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.88300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M MES PH REMARK 280 6.0 AND 20% PEG-4000, CRYOPROTECTED BY THE RESERVOIR SOLUTION REMARK 280 SUPPLEMENTED WITH 15% ETHYLENE GLYCOL, MICROBATCH, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 20.41250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -87.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -102.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 THR A 3 REMARK 465 GLY A 4 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 GLY B 157 REMARK 465 GLU B 158 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 VAL C 2 REMARK 465 THR C 3 REMARK 465 GLY C 4 REMARK 465 GLY C 5 REMARK 465 MET C 6 REMARK 465 GLY D -2 REMARK 465 SER D -1 REMARK 465 HIS D 0 REMARK 465 MET D 1 REMARK 465 VAL D 2 REMARK 465 THR D 3 REMARK 465 GLY D 4 REMARK 465 GLY D 5 REMARK 465 MET D 6 REMARK 465 ALA D 7 REMARK 465 GLU D 158 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 148 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 148 53.61 -144.44 REMARK 500 LEU C 74 -157.19 -124.83 REMARK 500 PHE C 114 143.31 -170.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 417 DISTANCE = 6.33 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 62 ND1 REMARK 620 2 CYS A 91 SG 101.4 REMARK 620 3 CYS A 94 SG 116.0 117.2 REMARK 620 4 HOH A 301 O 108.5 106.2 106.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 62 ND1 REMARK 620 2 CYS B 91 SG 101.2 REMARK 620 3 CYS B 94 SG 114.3 118.3 REMARK 620 4 EDO B 202 O2 112.7 107.0 103.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 62 ND1 REMARK 620 2 CYS C 91 SG 99.7 REMARK 620 3 CYS C 94 SG 116.1 118.3 REMARK 620 4 HOH C 336 O 109.1 113.3 100.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 62 ND1 REMARK 620 2 CYS D 91 SG 99.9 REMARK 620 3 CYS D 94 SG 116.1 119.3 REMARK 620 4 EDO D 202 O1 113.5 107.8 100.4 REMARK 620 N 1 2 3 DBREF 8VLK A 1 158 UNP Q12178 FCY1_YEAST 1 158 DBREF 8VLK B 1 158 UNP Q12178 FCY1_YEAST 1 158 DBREF 8VLK C 1 158 UNP Q12178 FCY1_YEAST 1 158 DBREF 8VLK D 1 158 UNP Q12178 FCY1_YEAST 1 158 SEQADV 8VLK GLY A -2 UNP Q12178 EXPRESSION TAG SEQADV 8VLK SER A -1 UNP Q12178 EXPRESSION TAG SEQADV 8VLK HIS A 0 UNP Q12178 EXPRESSION TAG SEQADV 8VLK GLY B -2 UNP Q12178 EXPRESSION TAG SEQADV 8VLK SER B -1 UNP Q12178 EXPRESSION TAG SEQADV 8VLK HIS B 0 UNP Q12178 EXPRESSION TAG SEQADV 8VLK GLY C -2 UNP Q12178 EXPRESSION TAG SEQADV 8VLK SER C -1 UNP Q12178 EXPRESSION TAG SEQADV 8VLK HIS C 0 UNP Q12178 EXPRESSION TAG SEQADV 8VLK GLY D -2 UNP Q12178 EXPRESSION TAG SEQADV 8VLK SER D -1 UNP Q12178 EXPRESSION TAG SEQADV 8VLK HIS D 0 UNP Q12178 EXPRESSION TAG SEQRES 1 A 161 GLY SER HIS MET VAL THR GLY GLY MET ALA SER LYS TRP SEQRES 2 A 161 ASP GLN LYS GLY MET ASP ILE ALA TYR GLU GLU ALA ALA SEQRES 3 A 161 LEU GLY TYR LYS GLU GLY GLY VAL PRO ILE GLY GLY CYS SEQRES 4 A 161 LEU ILE ASN ASN LYS ASP GLY SER VAL LEU GLY ARG GLY SEQRES 5 A 161 HIS ASN MET ARG PHE GLN LYS GLY SER ALA THR LEU HIS SEQRES 6 A 161 GLY GLU ILE SER THR LEU GLU ASN CYS GLY ARG LEU GLU SEQRES 7 A 161 GLY LYS VAL TYR LYS ASP THR THR LEU TYR THR THR LEU SEQRES 8 A 161 SER PRO CYS ASP MET CYS THR GLY ALA ILE ILE MET TYR SEQRES 9 A 161 GLY ILE PRO ARG CYS VAL VAL GLY GLU ASN VAL ASN PHE SEQRES 10 A 161 LYS SER LYS GLY GLU LYS TYR LEU GLN THR ARG GLY HIS SEQRES 11 A 161 GLU VAL VAL VAL VAL ASP ASP GLU ARG CYS LYS LYS ILE SEQRES 12 A 161 MET LYS GLN PHE ILE ASP GLU ARG PRO GLN ASP TRP PHE SEQRES 13 A 161 GLU ASP ILE GLY GLU SEQRES 1 B 161 GLY SER HIS MET VAL THR GLY GLY MET ALA SER LYS TRP SEQRES 2 B 161 ASP GLN LYS GLY MET ASP ILE ALA TYR GLU GLU ALA ALA SEQRES 3 B 161 LEU GLY TYR LYS GLU GLY GLY VAL PRO ILE GLY GLY CYS SEQRES 4 B 161 LEU ILE ASN ASN LYS ASP GLY SER VAL LEU GLY ARG GLY SEQRES 5 B 161 HIS ASN MET ARG PHE GLN LYS GLY SER ALA THR LEU HIS SEQRES 6 B 161 GLY GLU ILE SER THR LEU GLU ASN CYS GLY ARG LEU GLU SEQRES 7 B 161 GLY LYS VAL TYR LYS ASP THR THR LEU TYR THR THR LEU SEQRES 8 B 161 SER PRO CYS ASP MET CYS THR GLY ALA ILE ILE MET TYR SEQRES 9 B 161 GLY ILE PRO ARG CYS VAL VAL GLY GLU ASN VAL ASN PHE SEQRES 10 B 161 LYS SER LYS GLY GLU LYS TYR LEU GLN THR ARG GLY HIS SEQRES 11 B 161 GLU VAL VAL VAL VAL ASP ASP GLU ARG CYS LYS LYS ILE SEQRES 12 B 161 MET LYS GLN PHE ILE ASP GLU ARG PRO GLN ASP TRP PHE SEQRES 13 B 161 GLU ASP ILE GLY GLU SEQRES 1 C 161 GLY SER HIS MET VAL THR GLY GLY MET ALA SER LYS TRP SEQRES 2 C 161 ASP GLN LYS GLY MET ASP ILE ALA TYR GLU GLU ALA ALA SEQRES 3 C 161 LEU GLY TYR LYS GLU GLY GLY VAL PRO ILE GLY GLY CYS SEQRES 4 C 161 LEU ILE ASN ASN LYS ASP GLY SER VAL LEU GLY ARG GLY SEQRES 5 C 161 HIS ASN MET ARG PHE GLN LYS GLY SER ALA THR LEU HIS SEQRES 6 C 161 GLY GLU ILE SER THR LEU GLU ASN CYS GLY ARG LEU GLU SEQRES 7 C 161 GLY LYS VAL TYR LYS ASP THR THR LEU TYR THR THR LEU SEQRES 8 C 161 SER PRO CYS ASP MET CYS THR GLY ALA ILE ILE MET TYR SEQRES 9 C 161 GLY ILE PRO ARG CYS VAL VAL GLY GLU ASN VAL ASN PHE SEQRES 10 C 161 LYS SER LYS GLY GLU LYS TYR LEU GLN THR ARG GLY HIS SEQRES 11 C 161 GLU VAL VAL VAL VAL ASP ASP GLU ARG CYS LYS LYS ILE SEQRES 12 C 161 MET LYS GLN PHE ILE ASP GLU ARG PRO GLN ASP TRP PHE SEQRES 13 C 161 GLU ASP ILE GLY GLU SEQRES 1 D 161 GLY SER HIS MET VAL THR GLY GLY MET ALA SER LYS TRP SEQRES 2 D 161 ASP GLN LYS GLY MET ASP ILE ALA TYR GLU GLU ALA ALA SEQRES 3 D 161 LEU GLY TYR LYS GLU GLY GLY VAL PRO ILE GLY GLY CYS SEQRES 4 D 161 LEU ILE ASN ASN LYS ASP GLY SER VAL LEU GLY ARG GLY SEQRES 5 D 161 HIS ASN MET ARG PHE GLN LYS GLY SER ALA THR LEU HIS SEQRES 6 D 161 GLY GLU ILE SER THR LEU GLU ASN CYS GLY ARG LEU GLU SEQRES 7 D 161 GLY LYS VAL TYR LYS ASP THR THR LEU TYR THR THR LEU SEQRES 8 D 161 SER PRO CYS ASP MET CYS THR GLY ALA ILE ILE MET TYR SEQRES 9 D 161 GLY ILE PRO ARG CYS VAL VAL GLY GLU ASN VAL ASN PHE SEQRES 10 D 161 LYS SER LYS GLY GLU LYS TYR LEU GLN THR ARG GLY HIS SEQRES 11 D 161 GLU VAL VAL VAL VAL ASP ASP GLU ARG CYS LYS LYS ILE SEQRES 12 D 161 MET LYS GLN PHE ILE ASP GLU ARG PRO GLN ASP TRP PHE SEQRES 13 D 161 GLU ASP ILE GLY GLU HET EDO A 201 4 HET EDO A 202 4 HET ZN A 203 1 HET SO4 A 204 5 HET EDO B 201 4 HET EDO B 202 4 HET ZN B 203 1 HET ZN C 201 1 HET SO4 C 202 5 HET EDO D 201 4 HET EDO D 202 4 HET ZN D 203 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 5 EDO 6(C2 H6 O2) FORMUL 7 ZN 4(ZN 2+) FORMUL 8 SO4 2(O4 S 2-) FORMUL 17 HOH *411(H2 O) HELIX 1 AA1 TRP A 10 GLU A 28 1 19 HELIX 2 AA2 MET A 52 GLY A 57 1 6 HELIX 3 AA3 HIS A 62 GLY A 72 1 11 HELIX 4 AA4 GLU A 75 LYS A 80 1 6 HELIX 5 AA5 CYS A 91 GLY A 102 1 12 HELIX 6 AA6 LYS A 117 ARG A 125 1 9 HELIX 7 AA7 ASP A 134 ARG A 148 1 15 HELIX 8 AA8 ARG A 148 ILE A 156 1 9 HELIX 9 AA9 TRP B 10 GLY B 29 1 20 HELIX 10 AB1 MET B 52 GLY B 57 1 6 HELIX 11 AB2 HIS B 62 GLY B 72 1 11 HELIX 12 AB3 GLU B 75 LYS B 80 1 6 HELIX 13 AB4 CYS B 91 GLY B 102 1 12 HELIX 14 AB5 LYS B 117 ARG B 125 1 9 HELIX 15 AB6 ASP B 134 ARG B 148 1 15 HELIX 16 AB7 ARG B 148 ILE B 156 1 9 HELIX 17 AB8 TRP C 10 GLU C 28 1 19 HELIX 18 AB9 MET C 52 GLY C 57 1 6 HELIX 19 AC1 HIS C 62 CYS C 71 1 10 HELIX 20 AC2 GLU C 75 LYS C 80 1 6 HELIX 21 AC3 CYS C 91 GLY C 102 1 12 HELIX 22 AC4 LYS C 117 ARG C 125 1 9 HELIX 23 AC5 ASP C 134 ARG C 148 1 15 HELIX 24 AC6 ARG C 148 ILE C 156 1 9 HELIX 25 AC7 TRP D 10 GLU D 28 1 19 HELIX 26 AC8 HIS D 62 GLY D 72 1 11 HELIX 27 AC9 GLU D 75 LYS D 80 5 6 HELIX 28 AD1 CYS D 91 GLY D 102 1 12 HELIX 29 AD2 LYS D 117 ARG D 125 1 9 HELIX 30 AD3 ASP D 134 ARG D 148 1 15 HELIX 31 AD4 ARG D 148 GLY D 157 1 10 SHEET 1 AA1 5 VAL A 45 HIS A 50 0 SHEET 2 AA1 5 GLY A 34 ASN A 39 -1 N GLY A 35 O GLY A 49 SHEET 3 AA1 5 THR A 82 LEU A 88 -1 O TYR A 85 N CYS A 36 SHEET 4 AA1 5 ARG A 105 GLU A 110 1 O VAL A 107 N THR A 86 SHEET 5 AA1 5 GLU A 128 VAL A 131 1 O VAL A 130 N VAL A 108 SHEET 1 AA2 5 VAL B 45 HIS B 50 0 SHEET 2 AA2 5 GLY B 34 ASN B 39 -1 N GLY B 35 O GLY B 49 SHEET 3 AA2 5 THR B 82 LEU B 88 -1 O TYR B 85 N CYS B 36 SHEET 4 AA2 5 ARG B 105 GLU B 110 1 O GLY B 109 N THR B 86 SHEET 5 AA2 5 GLU B 128 VAL B 131 1 O VAL B 130 N VAL B 108 SHEET 1 AA3 5 VAL C 45 HIS C 50 0 SHEET 2 AA3 5 GLY C 34 ASN C 39 -1 N GLY C 35 O GLY C 49 SHEET 3 AA3 5 THR C 82 LEU C 88 -1 O TYR C 85 N CYS C 36 SHEET 4 AA3 5 ARG C 105 GLU C 110 1 O GLY C 109 N THR C 86 SHEET 5 AA3 5 GLU C 128 VAL C 131 1 O VAL C 130 N VAL C 108 SHEET 1 AA4 5 VAL D 45 HIS D 50 0 SHEET 2 AA4 5 GLY D 34 ASN D 39 -1 N LEU D 37 O LEU D 46 SHEET 3 AA4 5 THR D 82 LEU D 88 -1 O TYR D 85 N CYS D 36 SHEET 4 AA4 5 ARG D 105 GLU D 110 1 O GLY D 109 N THR D 86 SHEET 5 AA4 5 GLU D 128 VAL D 131 1 O VAL D 130 N VAL D 108 LINK ND1 HIS A 62 ZN ZN A 203 1555 1555 2.05 LINK SG CYS A 91 ZN ZN A 203 1555 1555 2.32 LINK SG CYS A 94 ZN ZN A 203 1555 1555 2.23 LINK ZN ZN A 203 O HOH A 301 1555 1555 2.00 LINK ND1 HIS B 62 ZN ZN B 203 1555 1555 2.07 LINK SG CYS B 91 ZN ZN B 203 1555 1555 2.25 LINK SG CYS B 94 ZN ZN B 203 1555 1555 2.22 LINK O2 EDO B 202 ZN ZN B 203 1555 1555 2.10 LINK ND1 HIS C 62 ZN ZN C 201 1555 1555 2.01 LINK SG CYS C 91 ZN ZN C 201 1555 1555 2.34 LINK SG CYS C 94 ZN ZN C 201 1555 1555 2.22 LINK ZN ZN C 201 O HOH C 336 1555 1555 1.99 LINK ND1 HIS D 62 ZN ZN D 203 1555 1555 2.12 LINK SG CYS D 91 ZN ZN D 203 1555 1555 2.32 LINK SG CYS D 94 ZN ZN D 203 1555 1555 2.22 LINK O1 EDO D 202 ZN ZN D 203 1555 1555 2.09 CRYST1 77.865 40.825 97.728 90.00 104.79 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012843 0.000000 0.003391 0.00000 SCALE2 0.000000 0.024495 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010583 0.00000