HEADER MEMBRANE PROTEIN,TRANSFERASE 12-JAN-24 8VLY TITLE CRYO-EM STRUCTURE OF HUMAN HGSNAT IN TRANSITION STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TRANSMEMBRANE PROTEIN 76; COMPND 5 EC: 2.3.1.78; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HGSNAT, TMEM76; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS MEMBRANE PROTEIN, LYSOSOME, TRANSMEMBRANE ACETYLTRANSFERASE, KEYWDS 2 TRANSFERASE EXPDTA ELECTRON MICROSCOPY AUTHOR F.LI,B.ZHAO REVDAT 3 13-NOV-24 8VLY 1 REMARK REVDAT 2 16-OCT-24 8VLY 1 JRNL REVDAT 1 26-JUN-24 8VLY 0 JRNL AUTH B.ZHAO,Z.CAO,Y.ZHENG,P.NGUYEN,A.BOWEN,R.H.EDWARDS, JRNL AUTH 2 R.M.STROUD,Y.ZHOU,M.VAN LOOKEREN CAMPAGNE,F.LI JRNL TITL STRUCTURAL AND MECHANISTIC INSIGHTS INTO A LYSOSOMAL JRNL TITL 2 MEMBRANE ENZYME HGSNAT INVOLVED IN SANFILIPPO SYNDROME. JRNL REF NAT COMMUN V. 15 5388 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38918376 JRNL DOI 10.1038/S41467-024-49614-1 REMARK 2 REMARK 2 RESOLUTION. 3.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.610 REMARK 3 NUMBER OF PARTICLES : 226631 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8VLY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1000280535. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : PURIFIED HUMAN HGSNAT REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 2.90 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 10000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 22000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5400.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLY A 3 REMARK 465 ALA A 4 REMARK 465 ARG A 5 REMARK 465 ALA A 6 REMARK 465 SER A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 GLU A 10 REMARK 465 GLN A 11 REMARK 465 ARG A 12 REMARK 465 ARG A 13 REMARK 465 ALA A 14 REMARK 465 GLY A 15 REMARK 465 ARG A 16 REMARK 465 SER A 17 REMARK 465 GLY A 18 REMARK 465 GLN A 19 REMARK 465 ALA A 20 REMARK 465 ARG A 21 REMARK 465 ALA A 22 REMARK 465 ALA A 23 REMARK 465 GLU A 24 REMARK 465 ARG A 25 REMARK 465 ALA A 26 REMARK 465 ALA A 27 REMARK 465 GLY A 28 REMARK 465 MET A 29 REMARK 465 SER A 30 REMARK 465 GLY A 31 REMARK 465 ALA A 32 REMARK 465 GLY A 33 REMARK 465 ARG A 34 REMARK 465 ALA A 35 REMARK 465 LEU A 36 REMARK 465 ALA A 37 REMARK 465 ALA A 38 REMARK 465 LEU A 39 REMARK 465 LEU A 40 REMARK 465 LEU A 41 REMARK 465 ALA A 42 REMARK 465 ALA A 43 REMARK 465 SER A 44 REMARK 465 VAL A 45 REMARK 465 LEU A 46 REMARK 465 SER A 47 REMARK 465 ALA A 48 REMARK 465 ALA A 49 REMARK 465 LEU A 50 REMARK 465 LEU A 51 REMARK 465 ALA A 52 REMARK 465 PRO A 53 REMARK 465 GLY A 54 REMARK 465 GLY A 55 REMARK 465 SER A 56 REMARK 465 SER A 57 REMARK 465 GLY A 58 REMARK 465 ARG A 59 REMARK 465 ASP A 60 REMARK 465 ALA A 61 REMARK 465 GLN A 62 REMARK 465 ALA A 63 REMARK 465 ALA A 64 REMARK 465 PRO A 65 REMARK 465 PRO A 66 REMARK 465 ARG A 67 REMARK 465 ASP A 68 REMARK 465 LEU A 69 REMARK 465 ASP A 70 REMARK 465 LYS A 71 REMARK 465 LYS A 72 REMARK 465 ARG A 73 REMARK 465 HIS A 74 REMARK 465 ALA A 75 REMARK 465 HIS A 171 REMARK 465 ASN A 172 REMARK 465 GLY A 173 REMARK 465 VAL A 174 REMARK 465 SER A 175 REMARK 465 ASN A 191 REMARK 465 LEU A 192 REMARK 465 PRO A 193 REMARK 465 VAL A 194 REMARK 465 SER A 195 REMARK 465 ILE A 196 REMARK 465 ALA A 197 REMARK 465 PHE A 198 REMARK 465 LEU A 199 REMARK 465 ILE A 200 REMARK 465 GLY A 201 REMARK 465 LEU A 202 REMARK 465 ALA A 203 REMARK 465 VAL A 204 REMARK 465 ILE A 205 REMARK 465 ILE A 206 REMARK 465 VAL A 207 REMARK 465 ILE A 208 REMARK 465 SER A 209 REMARK 465 PHE A 210 REMARK 465 LEU A 211 REMARK 465 ARG A 212 REMARK 465 LEU A 213 REMARK 465 LEU A 214 REMARK 465 LEU A 215 REMARK 465 SER A 216 REMARK 465 LEU A 217 REMARK 465 ASP A 218 REMARK 465 ASP A 219 REMARK 465 PHE A 220 REMARK 465 ASN A 221 REMARK 465 ASN A 222 REMARK 465 TRP A 223 REMARK 465 ILE A 224 REMARK 465 SER A 225 REMARK 465 LYS A 226 REMARK 465 ALA A 227 REMARK 465 ILE A 228 REMARK 465 SER A 229 REMARK 465 SER A 230 REMARK 465 ARG A 231 REMARK 465 GLU A 232 REMARK 465 THR A 233 REMARK 465 ASP A 234 REMARK 465 ARG A 235 REMARK 465 LEU A 236 REMARK 465 ILE A 237 REMARK 465 ASN A 238 REMARK 465 SER A 239 REMARK 465 GLU A 240 REMARK 465 LEU A 241 REMARK 465 GLY A 242 REMARK 465 SER A 243 REMARK 465 PRO A 244 REMARK 465 SER A 245 REMARK 465 ARG A 246 REMARK 465 THR A 247 REMARK 465 ASP A 248 REMARK 465 PRO A 249 REMARK 465 LEU A 250 REMARK 465 ASP A 251 REMARK 465 GLY A 252 REMARK 465 ASP A 253 REMARK 465 VAL A 254 REMARK 465 GLN A 255 REMARK 465 PRO A 256 REMARK 465 ALA A 257 REMARK 465 THR A 258 REMARK 465 TRP A 259 REMARK 465 ARG A 260 REMARK 465 LEU A 261 REMARK 465 SER A 262 REMARK 465 ALA A 263 REMARK 465 LEU A 264 REMARK 465 PRO A 265 REMARK 465 PRO A 266 REMARK 465 GLU A 400 REMARK 465 HIS A 401 REMARK 465 CYS A 402 REMARK 465 ALA A 403 REMARK 465 SER A 404 REMARK 465 GLU A 405 REMARK 465 ARG A 406 REMARK 465 SER A 407 REMARK 465 CYS A 408 REMARK 465 LEU A 409 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLY B 3 REMARK 465 ALA B 4 REMARK 465 ARG B 5 REMARK 465 ALA B 6 REMARK 465 SER B 7 REMARK 465 ALA B 8 REMARK 465 ALA B 9 REMARK 465 GLU B 10 REMARK 465 GLN B 11 REMARK 465 ARG B 12 REMARK 465 ARG B 13 REMARK 465 ALA B 14 REMARK 465 GLY B 15 REMARK 465 ARG B 16 REMARK 465 SER B 17 REMARK 465 GLY B 18 REMARK 465 GLN B 19 REMARK 465 ALA B 20 REMARK 465 ARG B 21 REMARK 465 ALA B 22 REMARK 465 ALA B 23 REMARK 465 GLU B 24 REMARK 465 ARG B 25 REMARK 465 ALA B 26 REMARK 465 ALA B 27 REMARK 465 GLY B 28 REMARK 465 MET B 29 REMARK 465 SER B 30 REMARK 465 GLY B 31 REMARK 465 ALA B 32 REMARK 465 GLY B 33 REMARK 465 ARG B 34 REMARK 465 ALA B 35 REMARK 465 LEU B 36 REMARK 465 ALA B 37 REMARK 465 ALA B 38 REMARK 465 LEU B 39 REMARK 465 LEU B 40 REMARK 465 LEU B 41 REMARK 465 ALA B 42 REMARK 465 ALA B 43 REMARK 465 SER B 44 REMARK 465 VAL B 45 REMARK 465 LEU B 46 REMARK 465 SER B 47 REMARK 465 ALA B 48 REMARK 465 ALA B 49 REMARK 465 LEU B 50 REMARK 465 LEU B 51 REMARK 465 ALA B 52 REMARK 465 PRO B 53 REMARK 465 GLY B 54 REMARK 465 GLY B 55 REMARK 465 SER B 56 REMARK 465 SER B 57 REMARK 465 GLY B 58 REMARK 465 ARG B 59 REMARK 465 ASP B 60 REMARK 465 ALA B 61 REMARK 465 GLN B 62 REMARK 465 ALA B 63 REMARK 465 ALA B 64 REMARK 465 PRO B 65 REMARK 465 PRO B 66 REMARK 465 ARG B 67 REMARK 465 ASP B 68 REMARK 465 LEU B 69 REMARK 465 ASP B 70 REMARK 465 LYS B 71 REMARK 465 LYS B 72 REMARK 465 ARG B 73 REMARK 465 HIS B 74 REMARK 465 HIS B 171 REMARK 465 ASN B 172 REMARK 465 GLY B 173 REMARK 465 VAL B 174 REMARK 465 SER B 175 REMARK 465 GLU B 176 REMARK 465 SER B 190 REMARK 465 ASN B 191 REMARK 465 LEU B 192 REMARK 465 PRO B 193 REMARK 465 VAL B 194 REMARK 465 SER B 195 REMARK 465 ILE B 196 REMARK 465 ALA B 197 REMARK 465 PHE B 198 REMARK 465 LEU B 199 REMARK 465 ILE B 200 REMARK 465 GLY B 201 REMARK 465 LEU B 202 REMARK 465 ALA B 203 REMARK 465 VAL B 204 REMARK 465 ILE B 205 REMARK 465 ILE B 206 REMARK 465 VAL B 207 REMARK 465 ILE B 208 REMARK 465 SER B 209 REMARK 465 PHE B 210 REMARK 465 LEU B 211 REMARK 465 ARG B 212 REMARK 465 LEU B 213 REMARK 465 LEU B 214 REMARK 465 LEU B 215 REMARK 465 SER B 216 REMARK 465 LEU B 217 REMARK 465 ASP B 218 REMARK 465 ASP B 219 REMARK 465 PHE B 220 REMARK 465 ASN B 221 REMARK 465 ASN B 222 REMARK 465 TRP B 223 REMARK 465 ILE B 224 REMARK 465 SER B 225 REMARK 465 LYS B 226 REMARK 465 ALA B 227 REMARK 465 ILE B 228 REMARK 465 SER B 229 REMARK 465 SER B 230 REMARK 465 ARG B 231 REMARK 465 GLU B 232 REMARK 465 THR B 233 REMARK 465 ASP B 234 REMARK 465 ARG B 235 REMARK 465 LEU B 236 REMARK 465 ILE B 237 REMARK 465 ASN B 238 REMARK 465 SER B 239 REMARK 465 GLU B 240 REMARK 465 LEU B 241 REMARK 465 GLY B 242 REMARK 465 SER B 243 REMARK 465 PRO B 244 REMARK 465 SER B 245 REMARK 465 ARG B 246 REMARK 465 THR B 247 REMARK 465 ASP B 248 REMARK 465 PRO B 249 REMARK 465 LEU B 250 REMARK 465 ASP B 251 REMARK 465 GLY B 252 REMARK 465 ASP B 253 REMARK 465 VAL B 254 REMARK 465 GLN B 255 REMARK 465 PRO B 256 REMARK 465 ALA B 257 REMARK 465 THR B 258 REMARK 465 TRP B 259 REMARK 465 ARG B 260 REMARK 465 LEU B 261 REMARK 465 SER B 262 REMARK 465 ALA B 263 REMARK 465 LEU B 264 REMARK 465 PRO B 265 REMARK 465 PRO B 266 REMARK 465 ARG B 267 REMARK 465 GLU B 400 REMARK 465 HIS B 401 REMARK 465 CYS B 402 REMARK 465 ALA B 403 REMARK 465 SER B 404 REMARK 465 GLU B 405 REMARK 465 ARG B 406 REMARK 465 TRP B 661 REMARK 465 LYS B 662 REMARK 465 ILE B 663 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 76 CG CD OE1 OE2 REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 470 GLN A 117 CG CD OE1 NE2 REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 LYS A 148 CG CD CE NZ REMARK 470 LYS A 168 CG CD CE NZ REMARK 470 ASN A 169 CG OD1 ND2 REMARK 470 GLU A 176 CG CD OE1 OE2 REMARK 470 ASP A 180 CG OD1 OD2 REMARK 470 ASP A 189 CG OD1 OD2 REMARK 470 SER A 190 OG REMARK 470 ARG A 267 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 337 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 341 CG CD CE NZ REMARK 470 ARG A 345 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 369 CG OD1 OD2 REMARK 470 LYS A 370 CG CD CE NZ REMARK 470 LYS A 396 CG CD CE NZ REMARK 470 ARG A 412 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 478 CG OD1 OD2 REMARK 470 LYS A 525 CG CD CE NZ REMARK 470 LYS A 529 CG CD CE NZ REMARK 470 GLU A 554 CG CD OE1 OE2 REMARK 470 LYS A 592 CG CD CE NZ REMARK 470 LYS A 626 CG CD CE NZ REMARK 470 LYS A 628 CG CD CE NZ REMARK 470 LYS A 634 CG CD CE NZ REMARK 470 ARG A 656 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 658 CG CD CE NZ REMARK 470 LYS A 662 CG CD CE NZ REMARK 470 ILE A 663 CG1 CG2 CD1 REMARK 470 GLU B 76 CG CD OE1 OE2 REMARK 470 GLU B 89 CG CD OE1 OE2 REMARK 470 LYS B 120 CG CD CE NZ REMARK 470 LYS B 123 CG CD CE NZ REMARK 470 LEU B 145 CG CD1 CD2 REMARK 470 GLU B 146 CG CD OE1 OE2 REMARK 470 LYS B 148 CG CD CE NZ REMARK 470 LYS B 168 CG CD CE NZ REMARK 470 ASP B 189 CG OD1 OD2 REMARK 470 ARG B 331 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 337 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 341 CG CD CE NZ REMARK 470 ASP B 369 CG OD1 OD2 REMARK 470 LYS B 370 CG CD CE NZ REMARK 470 LYS B 396 CG CD CE NZ REMARK 470 CYS B 408 SG REMARK 470 LEU B 409 CG CD1 CD2 REMARK 470 ARG B 412 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 477 CG OD1 OD2 REMARK 470 GLU B 493 CG CD OE1 OE2 REMARK 470 ARG B 527 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 529 CG CD CE NZ REMARK 470 LYS B 551 CG CD CE NZ REMARK 470 GLU B 554 CG CD OE1 OE2 REMARK 470 GLU B 556 CG CD OE1 OE2 REMARK 470 LYS B 628 CG CD CE NZ REMARK 470 LYS B 634 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 147 O6 NAG C 1 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 135 110.68 -160.21 REMARK 500 ARG A 269 -11.62 71.78 REMARK 500 TRP A 300 -54.75 -122.50 REMARK 500 LEU A 411 58.36 -92.98 REMARK 500 GLU A 499 55.52 -92.27 REMARK 500 LYS A 551 19.35 59.09 REMARK 500 PHE A 617 33.78 -96.71 REMARK 500 TRP A 661 81.54 -69.40 REMARK 500 GLU B 89 53.04 -94.54 REMARK 500 SER B 137 148.30 -170.54 REMARK 500 ARG B 269 -14.04 73.30 REMARK 500 TRP B 300 -123.54 62.13 REMARK 500 SER B 417 56.74 -96.39 REMARK 500 CYS B 462 18.59 -144.24 REMARK 500 TYR B 524 57.59 -96.75 REMARK 500 VAL B 552 48.25 36.98 REMARK 500 GLU B 556 -168.87 -79.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-43348 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF HUMAN HGSNAT IN TRANSITION STATE DBREF 8VLY A 1 663 UNP Q68CP4 HGNAT_HUMAN 1 663 DBREF 8VLY B 1 663 UNP Q68CP4 HGNAT_HUMAN 1 663 SEQRES 1 A 663 MET THR GLY ALA ARG ALA SER ALA ALA GLU GLN ARG ARG SEQRES 2 A 663 ALA GLY ARG SER GLY GLN ALA ARG ALA ALA GLU ARG ALA SEQRES 3 A 663 ALA GLY MET SER GLY ALA GLY ARG ALA LEU ALA ALA LEU SEQRES 4 A 663 LEU LEU ALA ALA SER VAL LEU SER ALA ALA LEU LEU ALA SEQRES 5 A 663 PRO GLY GLY SER SER GLY ARG ASP ALA GLN ALA ALA PRO SEQRES 6 A 663 PRO ARG ASP LEU ASP LYS LYS ARG HIS ALA GLU LEU LYS SEQRES 7 A 663 MET ASP GLN ALA LEU LEU LEU ILE HIS ASN GLU LEU LEU SEQRES 8 A 663 TRP THR ASN LEU THR VAL TYR TRP LYS SER GLU CYS CYS SEQRES 9 A 663 TYR HIS CYS LEU PHE GLN VAL LEU VAL ASN VAL PRO GLN SEQRES 10 A 663 SER PRO LYS ALA GLY LYS PRO SER ALA ALA ALA ALA SER SEQRES 11 A 663 VAL SER THR GLN HIS GLY SER ILE LEU GLN LEU ASN ASP SEQRES 12 A 663 THR LEU GLU GLU LYS GLU VAL CYS ARG LEU GLU TYR ARG SEQRES 13 A 663 PHE GLY GLU PHE GLY ASN TYR SER LEU LEU VAL LYS ASN SEQRES 14 A 663 ILE HIS ASN GLY VAL SER GLU ILE ALA CYS ASP LEU ALA SEQRES 15 A 663 VAL ASN GLU ASP PRO VAL ASP SER ASN LEU PRO VAL SER SEQRES 16 A 663 ILE ALA PHE LEU ILE GLY LEU ALA VAL ILE ILE VAL ILE SEQRES 17 A 663 SER PHE LEU ARG LEU LEU LEU SER LEU ASP ASP PHE ASN SEQRES 18 A 663 ASN TRP ILE SER LYS ALA ILE SER SER ARG GLU THR ASP SEQRES 19 A 663 ARG LEU ILE ASN SER GLU LEU GLY SER PRO SER ARG THR SEQRES 20 A 663 ASP PRO LEU ASP GLY ASP VAL GLN PRO ALA THR TRP ARG SEQRES 21 A 663 LEU SER ALA LEU PRO PRO ARG LEU ARG SER VAL ASP THR SEQRES 22 A 663 PHE ARG GLY ILE ALA LEU ILE LEU MET VAL PHE VAL ASN SEQRES 23 A 663 TYR GLY GLY GLY LYS TYR TRP TYR PHE LYS HIS ALA SER SEQRES 24 A 663 TRP ASN GLY LEU THR VAL ALA ASP LEU VAL PHE PRO TRP SEQRES 25 A 663 PHE VAL PHE ILE MET GLY SER SER ILE PHE LEU SER MET SEQRES 26 A 663 THR SER ILE LEU GLN ARG GLY CYS SER LYS PHE ARG LEU SEQRES 27 A 663 LEU GLY LYS ILE ALA TRP ARG SER PHE LEU LEU ILE CYS SEQRES 28 A 663 ILE GLY ILE ILE ILE VAL ASN PRO ASN TYR CYS LEU GLY SEQRES 29 A 663 PRO LEU SER TRP ASP LYS VAL ARG ILE PRO GLY VAL LEU SEQRES 30 A 663 GLN ARG LEU GLY VAL THR TYR PHE VAL VAL ALA VAL LEU SEQRES 31 A 663 GLU LEU LEU PHE ALA LYS PRO VAL PRO GLU HIS CYS ALA SEQRES 32 A 663 SER GLU ARG SER CYS LEU SER LEU ARG ASP ILE THR SER SEQRES 33 A 663 SER TRP PRO GLN TRP LEU LEU ILE LEU VAL LEU GLU GLY SEQRES 34 A 663 LEU TRP LEU GLY LEU THR PHE LEU LEU PRO VAL PRO GLY SEQRES 35 A 663 CYS PRO THR GLY TYR LEU GLY PRO GLY GLY ILE GLY ASP SEQRES 36 A 663 PHE GLY LYS TYR PRO ASN CYS THR GLY GLY ALA ALA GLY SEQRES 37 A 663 TYR ILE ASP ARG LEU LEU LEU GLY ASP ASP HIS LEU TYR SEQRES 38 A 663 GLN HIS PRO SER SER ALA VAL LEU TYR HIS THR GLU VAL SEQRES 39 A 663 ALA TYR ASP PRO GLU GLY ILE LEU GLY THR ILE ASN SER SEQRES 40 A 663 ILE VAL MET ALA PHE LEU GLY VAL GLN ALA GLY LYS ILE SEQRES 41 A 663 LEU LEU TYR TYR LYS ALA ARG THR LYS ASP ILE LEU ILE SEQRES 42 A 663 ARG PHE THR ALA TRP CYS CYS ILE LEU GLY LEU ILE SER SEQRES 43 A 663 VAL ALA LEU THR LYS VAL SER GLU ASN GLU GLY PHE ILE SEQRES 44 A 663 PRO VAL ASN LYS ASN LEU TRP SER LEU SER TYR VAL THR SEQRES 45 A 663 THR LEU SER SER PHE ALA PHE PHE ILE LEU LEU VAL LEU SEQRES 46 A 663 TYR PRO VAL VAL ASP VAL LYS GLY LEU TRP THR GLY THR SEQRES 47 A 663 PRO PHE PHE TYR PRO GLY MET ASN SER ILE LEU VAL TYR SEQRES 48 A 663 VAL GLY HIS GLU VAL PHE GLU ASN TYR PHE PRO PHE GLN SEQRES 49 A 663 TRP LYS LEU LYS ASP ASN GLN SER HIS LYS GLU HIS LEU SEQRES 50 A 663 THR GLN ASN ILE VAL ALA THR ALA LEU TRP VAL LEU ILE SEQRES 51 A 663 ALA TYR ILE LEU TYR ARG LYS LYS ILE PHE TRP LYS ILE SEQRES 1 B 663 MET THR GLY ALA ARG ALA SER ALA ALA GLU GLN ARG ARG SEQRES 2 B 663 ALA GLY ARG SER GLY GLN ALA ARG ALA ALA GLU ARG ALA SEQRES 3 B 663 ALA GLY MET SER GLY ALA GLY ARG ALA LEU ALA ALA LEU SEQRES 4 B 663 LEU LEU ALA ALA SER VAL LEU SER ALA ALA LEU LEU ALA SEQRES 5 B 663 PRO GLY GLY SER SER GLY ARG ASP ALA GLN ALA ALA PRO SEQRES 6 B 663 PRO ARG ASP LEU ASP LYS LYS ARG HIS ALA GLU LEU LYS SEQRES 7 B 663 MET ASP GLN ALA LEU LEU LEU ILE HIS ASN GLU LEU LEU SEQRES 8 B 663 TRP THR ASN LEU THR VAL TYR TRP LYS SER GLU CYS CYS SEQRES 9 B 663 TYR HIS CYS LEU PHE GLN VAL LEU VAL ASN VAL PRO GLN SEQRES 10 B 663 SER PRO LYS ALA GLY LYS PRO SER ALA ALA ALA ALA SER SEQRES 11 B 663 VAL SER THR GLN HIS GLY SER ILE LEU GLN LEU ASN ASP SEQRES 12 B 663 THR LEU GLU GLU LYS GLU VAL CYS ARG LEU GLU TYR ARG SEQRES 13 B 663 PHE GLY GLU PHE GLY ASN TYR SER LEU LEU VAL LYS ASN SEQRES 14 B 663 ILE HIS ASN GLY VAL SER GLU ILE ALA CYS ASP LEU ALA SEQRES 15 B 663 VAL ASN GLU ASP PRO VAL ASP SER ASN LEU PRO VAL SER SEQRES 16 B 663 ILE ALA PHE LEU ILE GLY LEU ALA VAL ILE ILE VAL ILE SEQRES 17 B 663 SER PHE LEU ARG LEU LEU LEU SER LEU ASP ASP PHE ASN SEQRES 18 B 663 ASN TRP ILE SER LYS ALA ILE SER SER ARG GLU THR ASP SEQRES 19 B 663 ARG LEU ILE ASN SER GLU LEU GLY SER PRO SER ARG THR SEQRES 20 B 663 ASP PRO LEU ASP GLY ASP VAL GLN PRO ALA THR TRP ARG SEQRES 21 B 663 LEU SER ALA LEU PRO PRO ARG LEU ARG SER VAL ASP THR SEQRES 22 B 663 PHE ARG GLY ILE ALA LEU ILE LEU MET VAL PHE VAL ASN SEQRES 23 B 663 TYR GLY GLY GLY LYS TYR TRP TYR PHE LYS HIS ALA SER SEQRES 24 B 663 TRP ASN GLY LEU THR VAL ALA ASP LEU VAL PHE PRO TRP SEQRES 25 B 663 PHE VAL PHE ILE MET GLY SER SER ILE PHE LEU SER MET SEQRES 26 B 663 THR SER ILE LEU GLN ARG GLY CYS SER LYS PHE ARG LEU SEQRES 27 B 663 LEU GLY LYS ILE ALA TRP ARG SER PHE LEU LEU ILE CYS SEQRES 28 B 663 ILE GLY ILE ILE ILE VAL ASN PRO ASN TYR CYS LEU GLY SEQRES 29 B 663 PRO LEU SER TRP ASP LYS VAL ARG ILE PRO GLY VAL LEU SEQRES 30 B 663 GLN ARG LEU GLY VAL THR TYR PHE VAL VAL ALA VAL LEU SEQRES 31 B 663 GLU LEU LEU PHE ALA LYS PRO VAL PRO GLU HIS CYS ALA SEQRES 32 B 663 SER GLU ARG SER CYS LEU SER LEU ARG ASP ILE THR SER SEQRES 33 B 663 SER TRP PRO GLN TRP LEU LEU ILE LEU VAL LEU GLU GLY SEQRES 34 B 663 LEU TRP LEU GLY LEU THR PHE LEU LEU PRO VAL PRO GLY SEQRES 35 B 663 CYS PRO THR GLY TYR LEU GLY PRO GLY GLY ILE GLY ASP SEQRES 36 B 663 PHE GLY LYS TYR PRO ASN CYS THR GLY GLY ALA ALA GLY SEQRES 37 B 663 TYR ILE ASP ARG LEU LEU LEU GLY ASP ASP HIS LEU TYR SEQRES 38 B 663 GLN HIS PRO SER SER ALA VAL LEU TYR HIS THR GLU VAL SEQRES 39 B 663 ALA TYR ASP PRO GLU GLY ILE LEU GLY THR ILE ASN SER SEQRES 40 B 663 ILE VAL MET ALA PHE LEU GLY VAL GLN ALA GLY LYS ILE SEQRES 41 B 663 LEU LEU TYR TYR LYS ALA ARG THR LYS ASP ILE LEU ILE SEQRES 42 B 663 ARG PHE THR ALA TRP CYS CYS ILE LEU GLY LEU ILE SER SEQRES 43 B 663 VAL ALA LEU THR LYS VAL SER GLU ASN GLU GLY PHE ILE SEQRES 44 B 663 PRO VAL ASN LYS ASN LEU TRP SER LEU SER TYR VAL THR SEQRES 45 B 663 THR LEU SER SER PHE ALA PHE PHE ILE LEU LEU VAL LEU SEQRES 46 B 663 TYR PRO VAL VAL ASP VAL LYS GLY LEU TRP THR GLY THR SEQRES 47 B 663 PRO PHE PHE TYR PRO GLY MET ASN SER ILE LEU VAL TYR SEQRES 48 B 663 VAL GLY HIS GLU VAL PHE GLU ASN TYR PHE PRO PHE GLN SEQRES 49 B 663 TRP LYS LEU LYS ASP ASN GLN SER HIS LYS GLU HIS LEU SEQRES 50 B 663 THR GLN ASN ILE VAL ALA THR ALA LEU TRP VAL LEU ILE SEQRES 51 B 663 ALA TYR ILE LEU TYR ARG LYS LYS ILE PHE TRP LYS ILE HET NAG C 1 14 HET NAG C 2 14 HET NAG A 701 14 HET NAG A 702 14 HET NAG B 701 14 HET NAG B 702 14 HET NAG B 703 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 7(C8 H15 N O6) HELIX 1 AA1 ARG A 269 GLY A 288 1 20 HELIX 2 AA2 THR A 304 ASP A 307 5 4 HELIX 3 AA3 LEU A 308 GLY A 332 1 25 HELIX 4 AA4 SER A 334 VAL A 357 1 24 HELIX 5 AA5 SER A 367 VAL A 371 5 5 HELIX 6 AA6 GLY A 375 PHE A 394 1 20 HELIX 7 AA7 SER A 417 LEU A 438 1 22 HELIX 8 AA8 GLY A 454 LYS A 458 5 5 HELIX 9 AA9 GLY A 465 GLY A 476 1 12 HELIX 10 AB1 SER A 486 HIS A 491 1 6 HELIX 11 AB2 ILE A 501 TYR A 524 1 24 HELIX 12 AB3 ARG A 527 LYS A 551 1 25 HELIX 13 AB4 SER A 567 ASP A 590 1 24 HELIX 14 AB5 PHE A 600 ASN A 606 1 7 HELIX 15 AB6 ASN A 606 PHE A 617 1 12 HELIX 16 AB7 TYR A 620 GLN A 624 5 5 HELIX 17 AB8 SER A 632 LYS A 657 1 26 HELIX 18 AB9 ARG B 269 TYR B 287 1 19 HELIX 19 AC1 GLY B 288 LYS B 296 5 9 HELIX 20 AC2 THR B 304 LEU B 308 5 5 HELIX 21 AC3 VAL B 309 GLY B 332 1 24 HELIX 22 AC4 SER B 334 ILE B 356 1 23 HELIX 23 AC5 SER B 367 VAL B 371 5 5 HELIX 24 AC6 GLY B 375 PHE B 394 1 20 HELIX 25 AC7 LEU B 411 SER B 416 1 6 HELIX 26 AC8 SER B 417 LEU B 438 1 22 HELIX 27 AC9 GLY B 454 LYS B 458 5 5 HELIX 28 AD1 GLY B 465 GLY B 476 1 12 HELIX 29 AD2 LEU B 502 TYR B 524 1 23 HELIX 30 AD3 ARG B 527 LYS B 551 1 25 HELIX 31 AD4 SER B 567 ASP B 590 1 24 HELIX 32 AD5 PHE B 600 MET B 605 1 6 HELIX 33 AD6 ASN B 606 PHE B 617 1 12 HELIX 34 AD7 SER B 632 LYS B 657 1 26 SHEET 1 AA1 4 SER A 125 SER A 132 0 SHEET 2 AA1 4 GLN A 81 ASN A 88 -1 N LEU A 84 O ALA A 129 SHEET 3 AA1 4 TYR A 163 LYS A 168 1 O LEU A 165 N LEU A 85 SHEET 4 AA1 4 ALA A 178 VAL A 183 -1 O ALA A 182 N SER A 164 SHEET 1 AA2 4 GLN A 110 VAL A 115 0 SHEET 2 AA2 4 LEU A 95 LYS A 100 -1 N LEU A 95 O VAL A 115 SHEET 3 AA2 4 ILE A 138 ASP A 143 -1 O ASN A 142 N THR A 96 SHEET 4 AA2 4 GLU A 149 LEU A 153 -1 O VAL A 150 N LEU A 141 SHEET 1 AA3 4 ALA B 126 ALA B 127 0 SHEET 2 AA3 4 GLN B 81 GLU B 89 -1 N ILE B 86 O ALA B 127 SHEET 3 AA3 4 ASN B 162 LYS B 168 1 O VAL B 167 N GLU B 89 SHEET 4 AA3 4 ALA B 178 CYS B 179 -1 O ALA B 178 N LYS B 168 SHEET 1 AA4 4 SER B 130 SER B 132 0 SHEET 2 AA4 4 GLN B 81 GLU B 89 -1 N ALA B 82 O VAL B 131 SHEET 3 AA4 4 ASN B 162 LYS B 168 1 O VAL B 167 N GLU B 89 SHEET 4 AA4 4 ALA B 182 GLU B 185 -1 O ASN B 184 N ASN B 162 SHEET 1 AA5 4 GLN B 110 VAL B 115 0 SHEET 2 AA5 4 LEU B 95 TRP B 99 -1 N LEU B 95 O VAL B 115 SHEET 3 AA5 4 SER B 137 ASN B 142 -1 O GLN B 140 N TYR B 98 SHEET 4 AA5 4 GLU B 149 TYR B 155 -1 O VAL B 150 N LEU B 141 SSBOND 1 CYS A 104 CYS A 107 1555 1555 2.03 SSBOND 2 CYS A 151 CYS A 179 1555 1555 2.03 SSBOND 3 CYS A 362 CYS B 362 1555 1555 2.03 SSBOND 4 CYS A 443 CYS A 462 1555 1555 2.03 SSBOND 5 CYS B 104 CYS B 107 1555 1555 2.03 SSBOND 6 CYS B 151 CYS B 179 1555 1555 2.03 SSBOND 7 CYS B 443 CYS B 462 1555 1555 2.03 LINK ND2 ASN A 94 C1 NAG A 702 1555 1555 1.46 LINK ND2 ASN A 142 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 162 C1 NAG A 701 1555 1555 1.44 LINK ND2 ASN B 94 C1 NAG B 702 1555 1555 1.44 LINK ND2 ASN B 142 C1 NAG B 703 1555 1555 1.45 LINK ND2 ASN B 162 C1 NAG B 701 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000