HEADER RNA/IMMUNE SYSTEM 13-JAN-24 8VMB TITLE THE CRYSTAL STRUCTURE OF RHINOVIRUS C15 RNA REPLICATION ELEMENT SB- TITLE 2 LOOP MUTANT IN COMPLEX WITH FAB BL3-6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (83-MER); COMPND 3 CHAIN: R; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEAVY CHAIN OF FAB BL3-6; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: LIGHT CHAIN OF FAB BL3-6; COMPND 11 CHAIN: L; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 3; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENTEROVIRAL RNA, CLOVERLEAF-LIKE RNA, RVC15 RNA REPLICATION ELEMENT, KEYWDS 2 ENTEROVIRUS REPLICATION PLATFORM, RNA-FAB COMPLEX, RNA, RNA-IMMUNE KEYWDS 3 SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.K.DAS,D.KOIRALA REVDAT 2 07-AUG-24 8VMB 1 JRNL REVDAT 1 24-JUL-24 8VMB 0 JRNL AUTH N.K.DAS,J.VOGT,A.PATEL,H.A.BANNA,D.KOIRALA JRNL TITL STRUCTURAL BASIS FOR A HIGHLY CONSERVED RNA-MEDIATED JRNL TITL 2 ENTEROVIRAL GENOME REPLICATION. JRNL REF NUCLEIC ACIDS RES. 2024 JRNL REFN ESSN 1362-4962 JRNL PMID 39036953 JRNL DOI 10.1093/NAR/GKAE627 REMARK 2 REMARK 2 RESOLUTION. 2.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 87.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 22952 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 87.3300 - 7.1600 0.99 1600 154 0.1821 0.1916 REMARK 3 2 7.1600 - 5.6800 1.00 1529 144 0.1939 0.2229 REMARK 3 3 5.6800 - 4.9600 1.00 1523 146 0.1719 0.2228 REMARK 3 4 4.9600 - 4.5100 0.99 1504 143 0.1721 0.2300 REMARK 3 5 4.5100 - 4.1900 1.00 1499 142 0.1871 0.2648 REMARK 3 6 4.1900 - 3.9400 1.00 1496 143 0.2065 0.2853 REMARK 3 7 3.9400 - 3.7400 1.00 1504 144 0.2431 0.3195 REMARK 3 8 3.7400 - 3.5800 1.00 1479 140 0.2780 0.3656 REMARK 3 9 3.5800 - 3.4400 0.99 1473 140 0.2712 0.3077 REMARK 3 10 3.4400 - 3.3200 1.00 1498 143 0.2843 0.3303 REMARK 3 11 3.3200 - 3.2200 0.99 1460 140 0.3065 0.3351 REMARK 3 12 3.2200 - 3.1300 0.99 1478 139 0.3581 0.4102 REMARK 3 13 3.1300 - 3.0400 0.99 1470 140 0.4402 0.4738 REMARK 3 14 3.0400 - 2.9700 0.97 1443 138 0.5242 0.4950 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.586 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.565 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 120.1 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 137.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5385 REMARK 3 ANGLE : 1.150 7702 REMARK 3 CHIRALITY : 0.054 936 REMARK 3 PLANARITY : 0.011 677 REMARK 3 DIHEDRAL : 14.449 1470 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 3 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.9828 2.3450 -17.7233 REMARK 3 T TENSOR REMARK 3 T11: 1.4833 T22: 1.2434 REMARK 3 T33: 1.3206 T12: -0.1423 REMARK 3 T13: 0.1265 T23: -0.0243 REMARK 3 L TENSOR REMARK 3 L11: 4.5192 L22: 3.3364 REMARK 3 L33: 3.1113 L12: 0.9230 REMARK 3 L13: 0.4859 L23: -3.0685 REMARK 3 S TENSOR REMARK 3 S11: -0.2600 S12: 0.3069 S13: 0.3772 REMARK 3 S21: 0.4327 S22: 0.0163 S23: 0.1544 REMARK 3 S31: -2.1752 S32: 0.7310 S33: -0.1468 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 22 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.1591 -4.6863 -19.0857 REMARK 3 T TENSOR REMARK 3 T11: 1.1208 T22: 0.9837 REMARK 3 T33: 0.9589 T12: -0.0792 REMARK 3 T13: 0.0580 T23: -0.0773 REMARK 3 L TENSOR REMARK 3 L11: 1.1685 L22: 7.3950 REMARK 3 L33: 4.1442 L12: -0.4940 REMARK 3 L13: 0.6968 L23: -2.3056 REMARK 3 S TENSOR REMARK 3 S11: 0.0786 S12: -0.1233 S13: 0.0621 REMARK 3 S21: -0.2077 S22: -0.0878 S23: -0.3276 REMARK 3 S31: 0.0979 S32: 0.8676 S33: 0.0117 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 137 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.1178 34.5902 -32.1336 REMARK 3 T TENSOR REMARK 3 T11: 2.2831 T22: 1.5334 REMARK 3 T33: 1.4543 T12: 0.2333 REMARK 3 T13: 0.2048 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 0.7228 L22: 0.4781 REMARK 3 L33: 0.9761 L12: -0.4252 REMARK 3 L13: 0.7131 L23: -0.6813 REMARK 3 S TENSOR REMARK 3 S11: 0.2128 S12: 0.7739 S13: 0.8790 REMARK 3 S21: 0.7021 S22: 0.5527 S23: 0.1848 REMARK 3 S31: -2.1603 S32: -1.5162 S33: -0.3399 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 148 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.9713 25.9281 -25.6322 REMARK 3 T TENSOR REMARK 3 T11: 1.8382 T22: 0.7422 REMARK 3 T33: 1.2092 T12: -0.1253 REMARK 3 T13: 0.0187 T23: -0.1247 REMARK 3 L TENSOR REMARK 3 L11: 5.4982 L22: 0.6804 REMARK 3 L33: 2.9284 L12: -0.9948 REMARK 3 L13: -1.3934 L23: -1.0828 REMARK 3 S TENSOR REMARK 3 S11: -0.3417 S12: -0.3652 S13: 0.5290 REMARK 3 S21: 0.6745 S22: 0.0642 S23: -0.0320 REMARK 3 S31: -0.8222 S32: -0.1188 S33: 0.1238 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.0695 -4.0737 -23.4117 REMARK 3 T TENSOR REMARK 3 T11: 1.2820 T22: 0.7050 REMARK 3 T33: 1.0562 T12: -0.0670 REMARK 3 T13: -0.0472 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 1.4858 L22: 1.1021 REMARK 3 L33: 3.5578 L12: -0.7948 REMARK 3 L13: -0.2183 L23: -1.6941 REMARK 3 S TENSOR REMARK 3 S11: 0.0619 S12: -0.0229 S13: -0.2421 REMARK 3 S21: 0.1630 S22: 0.0989 S23: 0.4488 REMARK 3 S31: 0.0334 S32: -0.1600 S33: -0.1617 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 130 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.0379 18.4424 -38.3128 REMARK 3 T TENSOR REMARK 3 T11: 1.7508 T22: 0.5817 REMARK 3 T33: 1.2193 T12: -0.0046 REMARK 3 T13: 0.1257 T23: -0.0720 REMARK 3 L TENSOR REMARK 3 L11: 3.7105 L22: 3.5699 REMARK 3 L33: 5.4302 L12: 2.1003 REMARK 3 L13: -2.5185 L23: -4.2486 REMARK 3 S TENSOR REMARK 3 S11: -0.1261 S12: -0.2752 S13: -0.6086 REMARK 3 S21: -1.0455 S22: -0.3458 S23: -0.4856 REMARK 3 S31: 0.0292 S32: 0.0692 S33: 0.2510 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 152 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.0841 22.4722 -40.9339 REMARK 3 T TENSOR REMARK 3 T11: 1.9183 T22: 0.7640 REMARK 3 T33: 1.1465 T12: 0.0282 REMARK 3 T13: 0.0926 T23: -0.0611 REMARK 3 L TENSOR REMARK 3 L11: 4.9308 L22: 3.0699 REMARK 3 L33: 5.4471 L12: 1.7505 REMARK 3 L13: -2.2280 L23: -2.8200 REMARK 3 S TENSOR REMARK 3 S11: 0.1766 S12: -0.1874 S13: 0.2339 REMARK 3 S21: -0.3406 S22: 0.0037 S23: 0.0421 REMARK 3 S31: -0.3626 S32: 0.2653 S33: -0.0347 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 1 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3595 -36.3798 -4.9321 REMARK 3 T TENSOR REMARK 3 T11: 2.1013 T22: 1.2176 REMARK 3 T33: 1.4399 T12: 0.0580 REMARK 3 T13: -0.2181 T23: -0.0484 REMARK 3 L TENSOR REMARK 3 L11: 3.3512 L22: 7.6143 REMARK 3 L33: 1.4542 L12: -1.9865 REMARK 3 L13: 0.1479 L23: -3.4043 REMARK 3 S TENSOR REMARK 3 S11: 0.4718 S12: 0.1787 S13: -0.7427 REMARK 3 S21: 0.3081 S22: -0.7134 S23: -0.3914 REMARK 3 S31: 0.7033 S32: -0.0399 S33: 0.2862 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 31 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.0305 -62.5731 -4.7361 REMARK 3 T TENSOR REMARK 3 T11: 2.0205 T22: 1.1018 REMARK 3 T33: 1.7887 T12: -0.0616 REMARK 3 T13: -0.1037 T23: -0.1447 REMARK 3 L TENSOR REMARK 3 L11: 3.3820 L22: 2.8321 REMARK 3 L33: 7.3189 L12: -1.9294 REMARK 3 L13: 3.3117 L23: 1.0519 REMARK 3 S TENSOR REMARK 3 S11: 0.6274 S12: 0.1164 S13: -0.4381 REMARK 3 S21: -0.8964 S22: -0.6832 S23: 0.8120 REMARK 3 S31: 0.8358 S32: -0.6324 S33: 0.1430 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 56 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9322 -79.2341 2.8021 REMARK 3 T TENSOR REMARK 3 T11: 2.8207 T22: 1.5041 REMARK 3 T33: 2.0251 T12: 0.1802 REMARK 3 T13: 0.0189 T23: -0.3107 REMARK 3 L TENSOR REMARK 3 L11: 5.8853 L22: 6.6402 REMARK 3 L33: 3.4405 L12: 0.5634 REMARK 3 L13: 1.2148 L23: -1.8771 REMARK 3 S TENSOR REMARK 3 S11: -0.4585 S12: 0.8849 S13: -1.6115 REMARK 3 S21: 1.1279 S22: -0.8696 S23: 0.5952 REMARK 3 S31: 1.7871 S32: 0.5567 S33: 1.4698 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'R' AND (RESID 73 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0921 -44.1956 7.9675 REMARK 3 T TENSOR REMARK 3 T11: 1.8086 T22: 1.0080 REMARK 3 T33: 1.4340 T12: 0.0979 REMARK 3 T13: 0.0925 T23: 0.0692 REMARK 3 L TENSOR REMARK 3 L11: 6.6435 L22: 7.1083 REMARK 3 L33: 6.4789 L12: -1.8210 REMARK 3 L13: -1.6650 L23: -3.6973 REMARK 3 S TENSOR REMARK 3 S11: 1.4599 S12: -0.2230 S13: 0.8559 REMARK 3 S21: -0.6398 S22: -2.2451 S23: -0.0566 REMARK 3 S31: -1.8196 S32: 0.7482 S33: 0.6064 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8VMB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1000280483. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : RAPD REMARK 200 DATA SCALING SOFTWARE : RAPD REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23068 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.970 REMARK 200 RESOLUTION RANGE LOW (A) : 99.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.15 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.20.1_4487 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM CHLORIDE, 0.01 M REMARK 280 CALCIUM CHLORIDE DIHYDRATE, 0.05 M SODIUM CACODYLATE TRIHYDRATE REMARK 280 PH 6.0, 10% W/V POLYETHYLENE GLYCOL 4000., VAPOR DIFFUSION, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 51.60800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.33200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.92350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 87.33200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 51.60800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.92350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 51.60800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.92350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 87.33200 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.92350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 51.60800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 87.33200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: R, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 C R 61 REMARK 465 C R 62 REMARK 465 GLU H 1 REMARK 465 ILE H 2 REMARK 465 THR H 231 REMARK 465 HIS H 232 REMARK 465 THR H 233 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL H 51 -55.62 -120.47 REMARK 500 TYR H 57 -19.55 69.33 REMARK 500 SER H 124 143.16 -172.78 REMARK 500 SER H 142 -112.63 36.29 REMARK 500 PRO H 214 -19.31 -45.25 REMARK 500 SER L 31 -107.38 51.73 REMARK 500 ALA L 33 46.69 -81.91 REMARK 500 SER L 51 -140.01 43.70 REMARK 500 GLU L 82 8.26 -65.86 REMARK 500 REMARK 500 REMARK: NULL DBREF 8VMB R 1 85 PDB 8VMB 8VMB 1 85 DBREF 8VMB H 1 233 PDB 8VMB 8VMB 1 233 DBREF 8VMB L 1 215 PDB 8VMB 8VMB 1 215 SEQRES 1 R 85 G G A A A C U G G G U A U SEQRES 2 R 85 A G G U G A A A C A C A C SEQRES 3 R 85 C U G U A C C A C C C A C SEQRES 4 R 85 G U G G U G U A G U G C U SEQRES 5 R 85 C C U G U A U U C C G G U SEQRES 6 R 85 A C A C U U G C A C G C C SEQRES 7 R 85 A G U U U C C SEQRES 1 H 233 GLU ILE SER GLU VAL GLN LEU VAL GLU SER GLY GLY GLY SEQRES 2 H 233 LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA SEQRES 3 H 233 ALA SER GLY PHE TYR ILE SER TYR SER SER ILE HIS TRP SEQRES 4 H 233 VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SEQRES 5 H 233 SER ILE SER PRO TYR SER GLY SER THR TYR TYR ALA ASP SEQRES 6 H 233 SER VAL LYS GLY ARG PHE THR ILE SER ALA ASP THR SER SEQRES 7 H 233 LYS ASN THR ALA TYR LEU GLN MET ASN SER LEU ARG ALA SEQRES 8 H 233 GLU ASP THR ALA VAL TYR TYR CYS ALA ARG GLN GLY TYR SEQRES 9 H 233 ARG ARG ARG SER GLY ARG GLY PHE ASP TYR TRP GLY GLN SEQRES 10 H 233 GLY THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY SEQRES 11 H 233 PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SEQRES 12 H 233 SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP SEQRES 13 H 233 TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY SEQRES 14 H 233 ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 15 H 233 GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR SEQRES 16 H 233 VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS SEQRES 17 H 233 ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS SEQRES 18 H 233 LYS VAL GLU PRO LYS SER CYS ASP LYS THR HIS THR SEQRES 1 L 215 SER ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER SEQRES 2 L 215 ALA SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SEQRES 3 L 215 SER GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN SEQRES 4 L 215 LYS PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SEQRES 5 L 215 SER SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SEQRES 6 L 215 SER ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER SEQRES 7 L 215 LEU GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SEQRES 8 L 215 SER TYR SER PHE PRO SER THR PHE GLY GLN GLY THR LYS SEQRES 9 L 215 VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS HELIX 1 AA1 TYR H 31 SER H 35 5 5 HELIX 2 AA2 ARG H 90 THR H 94 5 5 HELIX 3 AA3 TYR H 104 GLY H 109 1 6 HELIX 4 AA4 PRO H 197 LEU H 201 5 5 HELIX 5 AA5 LYS H 213 ASN H 216 5 4 HELIX 6 AA6 GLN L 80 PHE L 84 5 5 HELIX 7 AA7 SER L 122 LYS L 127 1 6 HELIX 8 AA8 LYS L 184 GLU L 188 1 5 SHEET 1 AA1 4 GLN H 6 SER H 10 0 SHEET 2 AA1 4 ARG H 22 SER H 28 -1 O SER H 28 N GLN H 6 SHEET 3 AA1 4 THR H 81 MET H 86 -1 O ALA H 82 N CYS H 25 SHEET 4 AA1 4 PHE H 71 ASP H 76 -1 N SER H 74 O TYR H 83 SHEET 1 AA2 6 LEU H 14 VAL H 15 0 SHEET 2 AA2 6 THR H 119 VAL H 123 1 O THR H 122 N VAL H 15 SHEET 3 AA2 6 ALA H 95 GLN H 102 -1 N TYR H 97 O THR H 119 SHEET 4 AA2 6 ILE H 37 GLN H 42 -1 N HIS H 38 O ALA H 100 SHEET 5 AA2 6 LEU H 48 ILE H 54 -1 O ALA H 52 N TRP H 39 SHEET 6 AA2 6 THR H 61 TYR H 63 -1 O TYR H 62 N SER H 53 SHEET 1 AA3 4 LEU H 14 VAL H 15 0 SHEET 2 AA3 4 THR H 119 VAL H 123 1 O THR H 122 N VAL H 15 SHEET 3 AA3 4 ALA H 95 GLN H 102 -1 N TYR H 97 O THR H 119 SHEET 4 AA3 4 PHE H 112 TRP H 115 -1 O TYR H 114 N ARG H 101 SHEET 1 AA4 4 SER H 132 LEU H 136 0 SHEET 2 AA4 4 ALA H 148 TYR H 157 -1 O LEU H 153 N PHE H 134 SHEET 3 AA4 4 TYR H 188 VAL H 196 -1 O TYR H 188 N TYR H 157 SHEET 4 AA4 4 VAL H 175 THR H 177 -1 N HIS H 176 O VAL H 193 SHEET 1 AA5 4 SER H 132 LEU H 136 0 SHEET 2 AA5 4 ALA H 148 TYR H 157 -1 O LEU H 153 N PHE H 134 SHEET 3 AA5 4 TYR H 188 VAL H 196 -1 O TYR H 188 N TYR H 157 SHEET 4 AA5 4 VAL H 181 LEU H 182 -1 N VAL H 181 O SER H 189 SHEET 1 AA6 3 THR H 163 TRP H 166 0 SHEET 2 AA6 3 TYR H 206 HIS H 212 -1 O ASN H 209 N SER H 165 SHEET 3 AA6 3 THR H 217 VAL H 223 -1 O VAL H 219 N VAL H 210 SHEET 1 AA7 4 MET L 5 SER L 8 0 SHEET 2 AA7 4 VAL L 20 ALA L 26 -1 O THR L 23 N SER L 8 SHEET 3 AA7 4 ASP L 71 ILE L 76 -1 O PHE L 72 N CYS L 24 SHEET 4 AA7 4 PHE L 63 SER L 68 -1 N SER L 68 O ASP L 71 SHEET 1 AA8 6 SER L 11 ALA L 14 0 SHEET 2 AA8 6 THR L 103 ILE L 107 1 O GLU L 106 N ALA L 14 SHEET 3 AA8 6 THR L 86 GLN L 91 -1 N TYR L 87 O THR L 103 SHEET 4 AA8 6 VAL L 34 GLN L 39 -1 N ALA L 35 O GLN L 90 SHEET 5 AA8 6 PRO L 45 TYR L 50 -1 O LYS L 46 N GLN L 38 SHEET 6 AA8 6 SER L 54 LEU L 55 -1 O SER L 54 N TYR L 50 SHEET 1 AA9 4 SER L 11 ALA L 14 0 SHEET 2 AA9 4 THR L 103 ILE L 107 1 O GLU L 106 N ALA L 14 SHEET 3 AA9 4 THR L 86 GLN L 91 -1 N TYR L 87 O THR L 103 SHEET 4 AA9 4 THR L 98 PHE L 99 -1 O THR L 98 N GLN L 91 SHEET 1 AB1 4 SER L 115 PHE L 119 0 SHEET 2 AB1 4 THR L 130 PHE L 140 -1 O LEU L 136 N PHE L 117 SHEET 3 AB1 4 TYR L 174 SER L 183 -1 O TYR L 174 N PHE L 140 SHEET 4 AB1 4 SER L 160 VAL L 164 -1 N GLN L 161 O THR L 179 SHEET 1 AB2 4 ALA L 154 LEU L 155 0 SHEET 2 AB2 4 LYS L 146 VAL L 151 -1 N VAL L 151 O ALA L 154 SHEET 3 AB2 4 VAL L 192 THR L 198 -1 O GLU L 196 N GLN L 148 SHEET 4 AB2 4 VAL L 206 ASN L 211 -1 O VAL L 206 N VAL L 197 SSBOND 1 CYS H 25 CYS H 99 1555 1555 2.04 SSBOND 2 CYS H 152 CYS H 208 1555 1555 2.03 SSBOND 3 CYS L 24 CYS L 89 1555 1555 2.08 SSBOND 4 CYS L 135 CYS L 195 1555 1555 2.01 CISPEP 1 PHE H 158 PRO H 159 0 -7.24 CISPEP 2 GLU H 160 PRO H 161 0 -1.41 CISPEP 3 SER L 8 PRO L 9 0 -13.16 CISPEP 4 PHE L 95 PRO L 96 0 3.15 CISPEP 5 TYR L 141 PRO L 142 0 3.82 CRYST1 103.216 121.847 174.664 90.00 90.00 90.00 I 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009688 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008207 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005725 0.00000