HEADER GENE REGULATION/DNA 14-JAN-24 8VOB TITLE H3K36ME3-MODIFIED NUCLEOSOME BOUND TO PRC2_AJ1-450 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (157-MER); COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HISTONE H3.2; COMPND 7 CHAIN: I, O; COMPND 8 SYNONYM: H3-CLUSTERED HISTONE 13,H3-CLUSTERED HISTONE 14,H3-CLUSTERED COMPND 9 HISTONE 15,HISTONE H3/M,HISTONE H3/O; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: HISTONE H4; COMPND 13 CHAIN: J, Q; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: HISTONE H2A TYPE 1; COMPND 17 CHAIN: K, R; COMPND 18 SYNONYM: H2A.1,HISTONE H2A/PTL; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: HISTONE H2B 1.1; COMPND 22 CHAIN: M, S; COMPND 23 SYNONYM: H2B1.1; COMPND 24 ENGINEERED: YES; COMPND 25 MOL_ID: 6; COMPND 26 MOLECULE: DNA (157-MER); COMPND 27 CHAIN: D; COMPND 28 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 GENE: H3C15, HIST2H3A, H3C14, H3F2, H3FM, HIST2H3C, H3C13, HIST2H3D; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 MOL_ID: 3; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 GENE: HIST1H4A, H4/A, H4FA, HIST1H4B, H4/I, H4FI, HIST1H4C, H4/G, SOURCE 17 H4FG, HIST1H4D, H4/B, H4FB, HIST1H4E, H4/J, H4FJ, HIST1H4F, H4/C, SOURCE 18 H4FC, HIST1H4H, H4/H, H4FH, HIST1H4I, H4/M, H4FM, HIST1H4J, H4/E, SOURCE 19 H4FE, HIST1H4K, H4/D, H4FD, HIST1H4L, H4/K, H4FK, HIST2H4A, H4/N, SOURCE 20 H4F2, H4FN, HIST2H4, HIST2H4B, H4/O, H4FO, HIST4H4; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 23 MOL_ID: 4; SOURCE 24 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 25 ORGANISM_COMMON: HUMAN; SOURCE 26 ORGANISM_TAXID: 9606; SOURCE 27 GENE: H2AC11, H2AFP, HIST1H2AG, H2AC13, H2AFC, HIST1H2AI, H2AC15, SOURCE 28 H2AFD, HIST1H2AK, H2AC16, H2AFI, HIST1H2AL, H2AC17, H2AFN, SOURCE 29 HIST1H2AM; SOURCE 30 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 31 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 32 MOL_ID: 5; SOURCE 33 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 34 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 35 ORGANISM_TAXID: 8355; SOURCE 36 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 37 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 38 MOL_ID: 6; SOURCE 39 SYNTHETIC: YES; SOURCE 40 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 41 ORGANISM_TAXID: 9606 KEYWDS NUCLEOSOME, CHROMATIN, HISTONE, EPIGENETICS, GENE REGULATION, GENE KEYWDS 2 REGULATION-DNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR T.COOKIS,E.NOGALES REVDAT 3 05-MAR-25 8VOB 1 JRNL REVDAT 2 22-JAN-25 8VOB 1 JRNL REVDAT 1 15-JAN-25 8VOB 0 JRNL AUTH T.COOKIS,A.LYDECKER,P.SAUER,V.KASINATH,E.NOGALES JRNL TITL STRUCTURAL BASIS FOR THE INHIBITION OF PRC2 BY ACTIVE JRNL TITL 2 TRANSCRIPTION HISTONE POSTTRANSLATIONAL MODIFICATIONS. JRNL REF NAT.STRUCT.MOL.BIOL. V. 32 393 2025 JRNL REFN ESSN 1545-9985 JRNL PMID 39774834 JRNL DOI 10.1038/S41594-024-01452-X REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.100 REMARK 3 NUMBER OF PARTICLES : 61193 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8VOB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1000280611. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : H3K36ME3 NUCLEOSOME CORE REMARK 245 PARTICLE BOUND TO PRC2_AJ1-450 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.90 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, I, J, K, M, O, Q, R, S, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET I 0 REMARK 465 ALA I 1 REMARK 465 ARG I 2 REMARK 465 THR I 3 REMARK 465 LYS I 4 REMARK 465 GLN I 5 REMARK 465 THR I 6 REMARK 465 ALA I 7 REMARK 465 ARG I 8 REMARK 465 LYS I 9 REMARK 465 SER I 10 REMARK 465 THR I 11 REMARK 465 GLY I 12 REMARK 465 GLY I 13 REMARK 465 LYS I 14 REMARK 465 ALA I 15 REMARK 465 PRO I 16 REMARK 465 ARG I 17 REMARK 465 LYS I 18 REMARK 465 GLN I 19 REMARK 465 LEU I 20 REMARK 465 ALA I 21 REMARK 465 THR I 22 REMARK 465 LYS I 23 REMARK 465 ALA I 24 REMARK 465 ALA I 25 REMARK 465 ARG I 26 REMARK 465 LYS I 27 REMARK 465 SER I 28 REMARK 465 ALA I 29 REMARK 465 PRO I 30 REMARK 465 ALA I 31 REMARK 465 THR I 32 REMARK 465 GLY I 33 REMARK 465 GLY I 34 REMARK 465 MET J 0 REMARK 465 SER J 1 REMARK 465 GLY J 2 REMARK 465 ARG J 3 REMARK 465 GLY J 4 REMARK 465 LYS J 5 REMARK 465 GLY J 6 REMARK 465 GLY J 7 REMARK 465 LYS J 8 REMARK 465 GLY J 9 REMARK 465 LEU J 10 REMARK 465 GLY J 11 REMARK 465 LYS J 12 REMARK 465 GLY J 13 REMARK 465 GLY J 14 REMARK 465 ALA J 15 REMARK 465 LYS J 16 REMARK 465 ARG J 17 REMARK 465 HIS J 18 REMARK 465 ARG J 19 REMARK 465 ARG M 27 REMARK 465 MET O 0 REMARK 465 ALA O 1 REMARK 465 ARG O 2 REMARK 465 THR O 3 REMARK 465 LYS O 4 REMARK 465 GLN O 5 REMARK 465 THR O 6 REMARK 465 ALA O 7 REMARK 465 ARG O 8 REMARK 465 LYS O 9 REMARK 465 SER O 10 REMARK 465 THR O 11 REMARK 465 GLY O 12 REMARK 465 GLY O 13 REMARK 465 LYS O 14 REMARK 465 ALA O 15 REMARK 465 PRO O 16 REMARK 465 ARG O 17 REMARK 465 LYS O 18 REMARK 465 GLN O 19 REMARK 465 LEU O 20 REMARK 465 ALA O 21 REMARK 465 THR O 22 REMARK 465 LYS O 23 REMARK 465 ALA O 24 REMARK 465 ALA O 25 REMARK 465 ARG O 26 REMARK 465 LYS O 27 REMARK 465 SER O 28 REMARK 465 ALA O 29 REMARK 465 PRO O 30 REMARK 465 ALA O 31 REMARK 465 THR O 32 REMARK 465 GLY O 33 REMARK 465 GLY O 34 REMARK 465 VAL O 35 REMARK 465 M3L O 36 REMARK 465 MET Q 0 REMARK 465 SER Q 1 REMARK 465 GLY Q 2 REMARK 465 ARG Q 3 REMARK 465 GLY Q 4 REMARK 465 LYS Q 5 REMARK 465 GLY Q 6 REMARK 465 GLY Q 7 REMARK 465 LYS Q 8 REMARK 465 GLY Q 9 REMARK 465 LEU Q 10 REMARK 465 GLY Q 11 REMARK 465 LYS Q 12 REMARK 465 GLY Q 13 REMARK 465 GLY Q 14 REMARK 465 ALA Q 15 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS K 13 CG CD CE NZ REMARK 470 LYS M 28 CG CD CE NZ REMARK 470 LYS M 122 CG CD CE NZ REMARK 470 LYS Q 16 CG CD CE NZ REMARK 470 ARG Q 17 CG CD NE CZ NH1 NH2 REMARK 470 HIS Q 18 CG ND1 CD2 CE1 NE2 REMARK 470 ARG Q 19 CG CD NE CZ NH1 NH2 REMARK 470 LYS Q 20 CG CD CE NZ REMARK 470 VAL Q 21 CG1 CG2 REMARK 470 LEU Q 22 CG CD1 CD2 REMARK 470 ARG Q 23 CG CD NE CZ NH1 NH2 REMARK 470 ARG S 27 CG CD NE CZ NH1 NH2 REMARK 470 LYS S 28 CG CD CE NZ REMARK 470 LYS S 122 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N2 DG H 137 O2 DC D 178 2.07 REMARK 500 O2 DC H 110 N2 DG D 205 2.12 REMARK 500 N2 DG H 135 O2 DC D 180 2.14 REMARK 500 O2 DC H 154 N2 DG D 161 2.14 REMARK 500 N2 DG H 93 O2 DC D 222 2.15 REMARK 500 N2 DG H 124 O2 DC D 191 2.16 REMARK 500 OH TYR K 50 OE1 GLN M 92 2.16 REMARK 500 O TYR R 39 OG SER S 75 2.18 REMARK 500 O LEU K 85 ND2 ASN K 89 2.18 REMARK 500 O2 DC H 134 N2 DG D 181 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO Q 32 CG PRO Q 32 CD -0.202 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG H 36 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG H 54 O4' - C1' - N9 ANGL. DEV. = 1.8 DEGREES REMARK 500 DC H 114 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 PRO Q 32 CA - N - CD ANGL. DEV. = -18.4 DEGREES REMARK 500 PRO Q 32 N - CD - CG ANGL. DEV. = -12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA I 114 49.45 -84.83 REMARK 500 LYS I 115 41.91 38.00 REMARK 500 PRO K 117 -177.48 -68.59 REMARK 500 TYR M 34 32.50 -97.59 REMARK 500 THR M 87 -169.97 -101.78 REMARK 500 PRO O 43 82.15 -69.55 REMARK 500 ARG R 99 53.92 -92.67 REMARK 500 PRO R 117 -179.81 -67.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-43373 RELATED DB: EMDB REMARK 900 H3K36ME3-MODIFIED NUCLEOSOME BOUND TO PRC2_AJ1-450 DBREF 8VOB H 1 157 PDB 8VOB 8VOB 1 157 DBREF 8VOB I 0 135 UNP Q71DI3 H32_HUMAN 1 136 DBREF 8VOB J 0 102 UNP P62805 H4_HUMAN 1 103 DBREF 8VOB K 12 119 UNP P0C0S8 H2A1_HUMAN 13 120 DBREF 8VOB M 27 122 UNP P02281 H2B11_XENLA 31 126 DBREF 8VOB O 0 135 UNP Q71DI3 H32_HUMAN 1 136 DBREF 8VOB Q 0 102 UNP P62805 H4_HUMAN 1 103 DBREF 8VOB R 12 119 UNP P0C0S8 H2A1_HUMAN 13 120 DBREF 8VOB S 27 122 UNP P02281 H2B11_XENLA 31 126 DBREF 8VOB D 158 314 PDB 8VOB 8VOB 158 314 SEQADV 8VOB VAL K 87 UNP P0C0S8 ILE 88 CONFLICT SEQADV 8VOB ARG K 99 UNP P0C0S8 LYS 100 CONFLICT SEQADV 8VOB SER K 113 UNP P0C0S8 ALA 114 CONFLICT SEQADV 8VOB CYS K 119 UNP P0C0S8 LYS 120 CONFLICT SEQADV 8VOB THR M 29 UNP P02281 SER 33 CONFLICT SEQADV 8VOB VAL R 87 UNP P0C0S8 ILE 88 CONFLICT SEQADV 8VOB ARG R 99 UNP P0C0S8 LYS 100 CONFLICT SEQADV 8VOB SER R 113 UNP P0C0S8 ALA 114 CONFLICT SEQADV 8VOB CYS R 119 UNP P0C0S8 LYS 120 CONFLICT SEQADV 8VOB THR S 29 UNP P02281 SER 33 CONFLICT SEQRES 1 H 157 DC DA DG DG DA DT DG DT DA DT DA DT DA SEQRES 2 H 157 DT DC DT DG DA DG DA DC DG DT DG DC DC SEQRES 3 H 157 DT DG DG DA DG DA DC DT DA DG DG DG DA SEQRES 4 H 157 DG DT DA DA DT DC DC DC DC DT DT DG DG SEQRES 5 H 157 DC DG DG DT DT DT DA DA DA DC DG DC DG SEQRES 6 H 157 DG DG DG DG DA DC DA DG DC DG DC DG DT SEQRES 7 H 157 DA DC DG DT DG DC DG DT DT DT DT DA DG SEQRES 8 H 157 DC DG DG DT DG DC DT DA DG DA DG DC DT SEQRES 9 H 157 DG DT DC DT DA DC DG DA DC DC DA DA DT SEQRES 10 H 157 DT DG DA DG DC DG DG DC DC DT DG DG DG SEQRES 11 H 157 DC DA DC DC DG DG DG DA DT DT DC DT DC SEQRES 12 H 157 DC DA DG DC DC DG DC DC DG DG DC DA DG SEQRES 13 H 157 DC SEQRES 1 I 136 MET ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY SEQRES 2 I 136 GLY LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA SEQRES 3 I 136 ARG LYS SER ALA PRO ALA THR GLY GLY VAL M3L LYS PRO SEQRES 4 I 136 HIS ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE SEQRES 5 I 136 ARG ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS SEQRES 6 I 136 LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP SEQRES 7 I 136 PHE LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET SEQRES 8 I 136 ALA LEU GLN GLU ALA SER GLU ALA TYR LEU VAL GLY LEU SEQRES 9 I 136 PHE GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS ARG SEQRES 10 I 136 VAL THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG SEQRES 11 I 136 ILE ARG GLY GLU ARG ALA SEQRES 1 J 103 MET SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS SEQRES 2 J 103 GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN SEQRES 3 J 103 ILE GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA SEQRES 4 J 103 ARG ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR SEQRES 5 J 103 GLU GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN SEQRES 6 J 103 VAL ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS SEQRES 7 J 103 ARG LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU SEQRES 8 J 103 LYS ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 K 108 ALA LYS ALA LYS THR ARG SER SER ARG ALA GLY LEU GLN SEQRES 2 K 108 PHE PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY SEQRES 3 K 108 ASN TYR ALA GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR SEQRES 4 K 108 LEU ALA ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU SEQRES 5 K 108 GLU LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR SEQRES 6 K 108 ARG ILE ILE PRO ARG HIS LEU GLN LEU ALA VAL ARG ASN SEQRES 7 K 108 ASP GLU GLU LEU ASN LYS LEU LEU GLY ARG VAL THR ILE SEQRES 8 K 108 ALA GLN GLY GLY VAL LEU PRO ASN ILE GLN SER VAL LEU SEQRES 9 K 108 LEU PRO LYS CYS SEQRES 1 M 96 ARG LYS THR ARG LYS GLU SER TYR ALA ILE TYR VAL TYR SEQRES 2 M 96 LYS VAL LEU LYS GLN VAL HIS PRO ASP THR GLY ILE SER SEQRES 3 M 96 SER LYS ALA MET SER ILE MET ASN SER PHE VAL ASN ASP SEQRES 4 M 96 VAL PHE GLU ARG ILE ALA GLY GLU ALA SER ARG LEU ALA SEQRES 5 M 96 HIS TYR ASN LYS ARG SER THR ILE THR SER ARG GLU ILE SEQRES 6 M 96 GLN THR ALA VAL ARG LEU LEU LEU PRO GLY GLU LEU ALA SEQRES 7 M 96 LYS HIS ALA VAL SER GLU GLY THR LYS ALA VAL THR LYS SEQRES 8 M 96 TYR THR SER ALA LYS SEQRES 1 O 136 MET ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY SEQRES 2 O 136 GLY LYS ALA PRO ARG LYS GLN LEU ALA THR LYS ALA ALA SEQRES 3 O 136 ARG LYS SER ALA PRO ALA THR GLY GLY VAL M3L LYS PRO SEQRES 4 O 136 HIS ARG TYR ARG PRO GLY THR VAL ALA LEU ARG GLU ILE SEQRES 5 O 136 ARG ARG TYR GLN LYS SER THR GLU LEU LEU ILE ARG LYS SEQRES 6 O 136 LEU PRO PHE GLN ARG LEU VAL ARG GLU ILE ALA GLN ASP SEQRES 7 O 136 PHE LYS THR ASP LEU ARG PHE GLN SER SER ALA VAL MET SEQRES 8 O 136 ALA LEU GLN GLU ALA SER GLU ALA TYR LEU VAL GLY LEU SEQRES 9 O 136 PHE GLU ASP THR ASN LEU CYS ALA ILE HIS ALA LYS ARG SEQRES 10 O 136 VAL THR ILE MET PRO LYS ASP ILE GLN LEU ALA ARG ARG SEQRES 11 O 136 ILE ARG GLY GLU ARG ALA SEQRES 1 Q 103 MET SER GLY ARG GLY LYS GLY GLY LYS GLY LEU GLY LYS SEQRES 2 Q 103 GLY GLY ALA LYS ARG HIS ARG LYS VAL LEU ARG ASP ASN SEQRES 3 Q 103 ILE GLN GLY ILE THR LYS PRO ALA ILE ARG ARG LEU ALA SEQRES 4 Q 103 ARG ARG GLY GLY VAL LYS ARG ILE SER GLY LEU ILE TYR SEQRES 5 Q 103 GLU GLU THR ARG GLY VAL LEU LYS VAL PHE LEU GLU ASN SEQRES 6 Q 103 VAL ILE ARG ASP ALA VAL THR TYR THR GLU HIS ALA LYS SEQRES 7 Q 103 ARG LYS THR VAL THR ALA MET ASP VAL VAL TYR ALA LEU SEQRES 8 Q 103 LYS ARG GLN GLY ARG THR LEU TYR GLY PHE GLY GLY SEQRES 1 R 108 ALA LYS ALA LYS THR ARG SER SER ARG ALA GLY LEU GLN SEQRES 2 R 108 PHE PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY SEQRES 3 R 108 ASN TYR ALA GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR SEQRES 4 R 108 LEU ALA ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU SEQRES 5 R 108 GLU LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR SEQRES 6 R 108 ARG ILE ILE PRO ARG HIS LEU GLN LEU ALA VAL ARG ASN SEQRES 7 R 108 ASP GLU GLU LEU ASN LYS LEU LEU GLY ARG VAL THR ILE SEQRES 8 R 108 ALA GLN GLY GLY VAL LEU PRO ASN ILE GLN SER VAL LEU SEQRES 9 R 108 LEU PRO LYS CYS SEQRES 1 S 96 ARG LYS THR ARG LYS GLU SER TYR ALA ILE TYR VAL TYR SEQRES 2 S 96 LYS VAL LEU LYS GLN VAL HIS PRO ASP THR GLY ILE SER SEQRES 3 S 96 SER LYS ALA MET SER ILE MET ASN SER PHE VAL ASN ASP SEQRES 4 S 96 VAL PHE GLU ARG ILE ALA GLY GLU ALA SER ARG LEU ALA SEQRES 5 S 96 HIS TYR ASN LYS ARG SER THR ILE THR SER ARG GLU ILE SEQRES 6 S 96 GLN THR ALA VAL ARG LEU LEU LEU PRO GLY GLU LEU ALA SEQRES 7 S 96 LYS HIS ALA VAL SER GLU GLY THR LYS ALA VAL THR LYS SEQRES 8 S 96 TYR THR SER ALA LYS SEQRES 1 D 157 DG DC DT DG DC DC DG DG DC DG DG DC DT SEQRES 2 D 157 DG DG DA DG DA DA DT DC DC DC DG DG DT SEQRES 3 D 157 DG DC DC DG DA DG DG DC DC DG DC DT DC SEQRES 4 D 157 DA DA DT DT DG DG DT DC DG DT DA DG DA SEQRES 5 D 157 DC DA DG DC DT DC DT DA DG DC DA DC DC SEQRES 6 D 157 DG DC DT DT DA DA DA DC DG DC DA DC DG SEQRES 7 D 157 DT DA DC DG DC DG DC DT DG DT DC DC DC SEQRES 8 D 157 DC DC DG DC DG DT DT DT DA DA DA DC DC SEQRES 9 D 157 DG DC DC DA DA DG DG DG DG DA DT DT DA SEQRES 10 D 157 DC DT DC DC DC DT DA DG DT DC DT DC DC SEQRES 11 D 157 DA DG DG DC DA DC DG DT DC DT DC DA DG SEQRES 12 D 157 DA DT DA DT DA DT DA DC DA DT DC DC DT SEQRES 13 D 157 DG MODRES 8VOB M3L I 36 LYS MODIFIED RESIDUE HET M3L I 36 12 HETNAM M3L N-TRIMETHYLLYSINE FORMUL 2 M3L C9 H21 N2 O2 1+ HELIX 1 AA1 THR I 45 LYS I 56 1 12 HELIX 2 AA2 ARG I 63 GLN I 76 1 14 HELIX 3 AA3 GLN I 85 ALA I 114 1 30 HELIX 4 AA4 MET I 120 ARG I 131 1 12 HELIX 5 AA5 ASP J 24 ILE J 29 5 6 HELIX 6 AA6 THR J 30 GLY J 42 1 13 HELIX 7 AA7 ILE J 50 ALA J 76 1 27 HELIX 8 AA8 THR J 82 GLY J 94 1 13 HELIX 9 AA9 THR K 16 ALA K 21 1 6 HELIX 10 AB1 PRO K 26 GLY K 37 1 12 HELIX 11 AB2 ALA K 45 ASN K 73 1 29 HELIX 12 AB3 ILE K 79 ARG K 88 1 10 HELIX 13 AB4 ASP K 90 GLY K 98 1 9 HELIX 14 AB5 GLN K 112 LEU K 116 5 5 HELIX 15 AB6 TYR M 34 HIS M 46 1 13 HELIX 16 AB7 SER M 52 ASN M 81 1 30 HELIX 17 AB8 THR M 87 LEU M 99 1 13 HELIX 18 AB9 GLY M 101 ALA M 121 1 21 HELIX 19 AC1 GLY O 44 GLN O 55 1 12 HELIX 20 AC2 ARG O 63 LYS O 79 1 17 HELIX 21 AC3 GLN O 85 ALA O 114 1 30 HELIX 22 AC4 MET O 120 GLY O 132 1 13 HELIX 23 AC5 ASN Q 25 ILE Q 29 5 5 HELIX 24 AC6 THR Q 30 GLY Q 42 1 13 HELIX 25 AC7 LEU Q 49 ALA Q 76 1 28 HELIX 26 AC8 THR Q 82 GLN Q 93 1 12 HELIX 27 AC9 THR R 16 ALA R 21 1 6 HELIX 28 AD1 VAL R 27 GLY R 37 1 11 HELIX 29 AD2 ALA R 45 ASN R 73 1 29 HELIX 30 AD3 ILE R 79 ASP R 90 1 12 HELIX 31 AD4 ASP R 90 LEU R 97 1 8 HELIX 32 AD5 GLN R 112 LEU R 116 5 5 HELIX 33 AD6 TYR S 34 HIS S 46 1 13 HELIX 34 AD7 SER S 52 ASN S 81 1 30 HELIX 35 AD8 THR S 87 LEU S 99 1 13 HELIX 36 AD9 GLY S 101 ALA S 121 1 21 SHEET 1 AA1 2 ARG I 83 PHE I 84 0 SHEET 2 AA1 2 THR J 80 VAL J 81 1 O VAL J 81 N ARG I 83 SHEET 1 AA2 2 THR I 118 ILE I 119 0 SHEET 2 AA2 2 ARG J 45 ILE J 46 1 O ARG J 45 N ILE I 119 SHEET 1 AA3 2 THR J 96 LEU J 97 0 SHEET 2 AA3 2 VAL R 100 THR R 101 1 O THR R 101 N THR J 96 SHEET 1 AA4 2 ARG K 42 VAL K 43 0 SHEET 2 AA4 2 THR M 85 ILE M 86 1 O ILE M 86 N ARG K 42 SHEET 1 AA5 2 ARG K 77 ILE K 78 0 SHEET 2 AA5 2 GLY M 50 ILE M 51 1 O GLY M 50 N ILE K 78 SHEET 1 AA6 2 THR K 101 ILE K 102 0 SHEET 2 AA6 2 LEU Q 97 TYR Q 98 1 O TYR Q 98 N THR K 101 SHEET 1 AA7 2 ARG O 83 PHE O 84 0 SHEET 2 AA7 2 THR Q 80 VAL Q 81 1 O VAL Q 81 N ARG O 83 SHEET 1 AA8 2 ARG R 42 VAL R 43 0 SHEET 2 AA8 2 THR S 85 ILE S 86 1 O ILE S 86 N ARG R 42 SHEET 1 AA9 2 ARG R 77 ILE R 78 0 SHEET 2 AA9 2 GLY S 50 ILE S 51 1 O GLY S 50 N ILE R 78 LINK C VAL I 35 N M3L I 36 1555 1555 1.33 LINK C M3L I 36 N LYS I 37 1555 1555 1.33 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 3238 DC H 157 HETATM 3246 N M3L I 36 212.953 193.982 207.579 1.00178.00 N HETATM 3247 CA M3L I 36 212.431 195.207 207.023 1.00178.00 C HETATM 3248 CB M3L I 36 212.352 196.304 208.100 1.00178.00 C HETATM 3249 CG M3L I 36 212.011 197.655 207.509 1.00178.00 C HETATM 3250 CD M3L I 36 211.927 198.716 208.593 1.00178.00 C HETATM 3251 CE M3L I 36 210.486 198.811 209.088 1.00178.00 C HETATM 3252 NZ M3L I 36 209.564 199.842 208.463 1.00178.00 N HETATM 3253 C M3L I 36 213.226 195.772 205.847 1.00178.00 C HETATM 3254 O M3L I 36 214.445 195.953 205.866 1.00178.00 O HETATM 3255 CM1 M3L I 36 208.619 200.405 209.472 1.00178.00 C HETATM 3256 CM2 M3L I 36 208.781 199.259 207.333 1.00178.00 C HETATM 3257 CM3 M3L I 36 210.396 200.964 207.926 1.00178.00 C TER 4074 ALA I 135 TER 4737 GLY J 102 TER 5563 CYS K 119 TER 6300 LYS M 122 TER 7117 ALA O 135 TER 7785 GLY Q 102 TER 8615 CYS R 119 TER 9357 LYS S 122 TER 12560 DG D 314 CONECT 3241 3246 CONECT 3246 3241 3247 CONECT 3247 3246 3248 3253 CONECT 3248 3247 3249 CONECT 3249 3248 3250 CONECT 3250 3249 3251 CONECT 3251 3250 3252 CONECT 3252 3251 3255 3256 3257 CONECT 3253 3247 3254 3258 CONECT 3254 3253 CONECT 3255 3252 CONECT 3256 3252 CONECT 3257 3252 CONECT 3258 3253 MASTER 323 0 1 36 18 0 0 612550 10 14 98 END