HEADER TRANSFERASE 20-JAN-24 8VR6 TITLE CRYSTAL STRUCTURE OF THE PCRYO_0619 N-ACETRYLTRANSFERASE FROM TITLE 2 PSYCHROBACTER CRYOHALOLENTIS K5 IN THE PRESENCE OF COA-DISULFIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYLTRANSFERASE, PUTATIVE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSYCHROBACTER CRYOHALOLENTIS K5; SOURCE 3 ORGANISM_TAXID: 335284; SOURCE 4 GENE: PCRYO_0619; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA2 KEYWDS PSYCHROBACTER, N-ACETYLTRANSFERASE, 2, 3, 4-TRIACETOAMIDO-2, 4- KEYWDS 2 TRIDEOXY-L-ARABINOSE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.M.DUNSIRN,N.J.BOCKHAUS,J.B.THODEN,H.M.HOLDEN REVDAT 1 31-JAN-24 8VR6 0 JRNL AUTH N.J.BOCKHAUS,M.M.DUNSIRN,J.B.THODEN,H.M.HOLDEN JRNL TITL BIOCHEMICAL INVESTIGATION OF THE ENZYMES REQUIRED FOR THE JRNL TITL 2 PRODUCTION OF 2,3,4-TRIACETOAMIDO-2,3,4-TRIDEOXY-L-ARABINOSE JRNL TITL 3 IN PSYCHROBACTER CRYOHALOLENTIS K5 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0405 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 18711 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1017 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1347 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.4090 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1339 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 62 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.135 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.133 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.118 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.305 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1462 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 1401 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1990 ; 1.490 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3237 ; 0.507 ; 1.575 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 176 ; 6.851 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 10 ;20.488 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 245 ;14.953 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 233 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1600 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 298 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 707 ; 4.218 ; 5.081 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 707 ; 4.214 ; 5.082 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 882 ; 5.040 ; 9.083 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 883 ; 5.038 ; 9.090 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 755 ; 5.756 ; 5.768 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 756 ; 5.753 ; 5.770 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1109 ; 8.055 ;10.421 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1656 ; 9.247 ;58.790 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1645 ; 9.267 ;58.900 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8VR6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1000281072. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19728 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 8.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 52.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.47000 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN INCUBATED WITH 2 MM COENZYME REMARK 280 A. PRECIPITANT: 23-26% PENTAERYTHRITOL ETHOXYLATE (3/4 EO/OH), REMARK 280 100 MM MES (PH 6), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 57.45150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.45150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.45150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.45150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 57.45150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.45150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 57.45150 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 57.45150 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 57.45150 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 57.45150 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 57.45150 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 57.45150 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 57.45150 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 57.45150 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 57.45150 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 57.45150 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 57.45150 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 57.45150 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 57.45150 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 57.45150 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 57.45150 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 57.45150 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 57.45150 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 57.45150 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 57.45150 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 57.45150 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 57.45150 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 57.45150 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 57.45150 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 57.45150 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 57.45150 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 57.45150 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 57.45150 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 57.45150 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 57.45150 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 57.45150 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 -57.45150 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 -57.45150 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 -57.45150 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 57.45150 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 346 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 357 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 358 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 GLY A -2 REMARK 465 GLY A -1 REMARK 465 ASN A 177 REMARK 465 ILE A 178 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 175 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 176 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 23 59.06 35.47 REMARK 500 ASP A 152 151.65 -48.81 REMARK 500 THR A 168 -169.27 -173.41 REMARK 500 ARG A 175 -176.74 -65.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 14 0.18 SIDE CHAIN REMARK 500 ARG A 102 0.10 SIDE CHAIN REMARK 500 ARG A 140 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 8VR6 A 1 178 UNP Q1QD51 Q1QD51_PSYCK 1 178 SEQADV 8VR6 GLY A -3 UNP Q1QD51 EXPRESSION TAG SEQADV 8VR6 GLY A -2 UNP Q1QD51 EXPRESSION TAG SEQADV 8VR6 GLY A -1 UNP Q1QD51 EXPRESSION TAG SEQADV 8VR6 HIS A 0 UNP Q1QD51 EXPRESSION TAG SEQRES 1 A 182 GLY GLY GLY HIS MET ILE LEU LEU LYS GLU LEU LYS GLU SEQRES 2 A 182 LEU PHE PHE LEU ARG THR THR TYR TYR LEU LYS LYS TYR SEQRES 3 A 182 ASN ARG SER LEU PRO PHE GLY ASP MET ILE VAL ASP ARG SEQRES 4 A 182 TRP ASP LYS ALA LYS LEU LEU GLY PHE GLY GLU GLY THR SEQRES 5 A 182 SER ILE TYR ASP SER SER ILE VAL LEU GLY GLU VAL LYS SEQRES 6 A 182 VAL GLY LYS ASP THR TRP ILE GLY PRO ASN THR ILE LEU SEQRES 7 A 182 ASP GLY SER GLY GLY GLY LEU ILE ILE GLY SER ASN CYS SEQRES 8 A 182 SER ILE SER ALA GLY VAL GLN ILE TYR THR HIS ASP THR SEQRES 9 A 182 VAL ARG LYS SER LEU SER GLY GLY LYS ALA ASP ILE ASP SEQRES 10 A 182 LYS ALA SER THR ARG ILE GLY SER ASP CYS TYR LEU GLY SEQRES 11 A 182 PRO ASN THR ILE ILE VAL LYS GLY VAL LYS ILE GLY ASP SEQRES 12 A 182 ARG VAL VAL VAL GLY ALA ASN SER LEU VAL LEU LYS ASP SEQRES 13 A 182 ILE PRO SER ASP CYS LYS VAL PHE GLY SER PRO ALA VAL SEQRES 14 A 182 ILE ILE THR ASP SER LEU ASN TYR GLN ARG ASN ASN ILE HET 5NG A 201 96 HETNAM 5NG [[(2~{S},3~{S},4~{R},5~{R})-5-(6-AMINOPURIN-9-YL)-4- HETNAM 2 5NG OXIDANYL-3-PHOSPHONOOXY-OXOLAN-2-YL]METHOXY-OXIDANYL- HETNAM 3 5NG PHOSPHORYL] [(3~{R})-4-[[3-[2-[2-[3-[[(2~{R})-4- HETNAM 4 5NG [[[(2~{R},3~{S},4~{R},5~{R})-5-(6-AMINOPURIN-9-YL)-4- HETNAM 5 5NG OXIDANYL-3-PHOSPHONOOXY-OXOLAN-2-YL]METHOXY-OXIDANYL- HETNAM 6 5NG PHOSPHORYL]OXY-OXIDANYL-PHOSPHORYL]OXY-3,3-DIMETHYL-2- HETNAM 7 5NG OXIDANYL-BUTANOYL]AMINO]PROPANOYLAMINO]ETHYLDISULFANYL HETNAM 8 5NG ]ETHYLAMINO]-3-OXIDANYLIDENE-PROPYL]AMINO]-2,2- HETNAM 9 5NG DIMETHYL-3-OXIDANYL-4-OXIDANYLIDENE-BUTYL] HYDROGEN HETNAM 10 5NG PHOSPHATE HETSYN 5NG COA-DISULFIDE FORMUL 2 5NG C42 H70 N14 O32 P6 S2 FORMUL 3 HOH *62(H2 O) HELIX 1 AA1 HIS A 0 ASN A 23 1 24 HELIX 2 AA2 PRO A 27 VAL A 33 1 7 HELIX 3 AA3 ASP A 34 LEU A 42 1 9 HELIX 4 AA4 THR A 100 SER A 106 1 7 HELIX 5 AA5 LEU A 171 ARG A 175 5 5 SHEET 1 AA1 7 SER A 49 ILE A 50 0 SHEET 2 AA1 7 TRP A 67 ILE A 68 1 O ILE A 68 N SER A 49 SHEET 3 AA1 7 SER A 88 ILE A 89 1 O ILE A 89 N TRP A 67 SHEET 4 AA1 7 TYR A 124 LEU A 125 1 O LEU A 125 N SER A 88 SHEET 5 AA1 7 VAL A 142 VAL A 143 1 O VAL A 143 N TYR A 124 SHEET 6 AA1 7 CYS A 157 PHE A 160 1 O VAL A 159 N VAL A 142 SHEET 7 AA1 7 VAL A 165 ASP A 169 -1 O ILE A 167 N LYS A 158 SHEET 1 AA2 4 ILE A 55 VAL A 62 0 SHEET 2 AA2 4 ILE A 73 ILE A 83 1 O GLY A 76 N LEU A 57 SHEET 3 AA2 4 THR A 117 ILE A 119 1 O ILE A 119 N ILE A 82 SHEET 4 AA2 4 LYS A 136 ILE A 137 1 O ILE A 137 N ARG A 118 SHEET 1 AA3 5 ILE A 55 VAL A 62 0 SHEET 2 AA3 5 ILE A 73 ILE A 83 1 O GLY A 76 N LEU A 57 SHEET 3 AA3 5 GLN A 94 ILE A 95 1 O ILE A 95 N ILE A 73 SHEET 4 AA3 5 ILE A 130 ILE A 131 1 O ILE A 131 N GLN A 94 SHEET 5 AA3 5 LEU A 148 VAL A 149 1 O VAL A 149 N ILE A 130 SHEET 1 AA4 2 HIS A 98 ASP A 99 0 SHEET 2 AA4 2 ASP A 113 LYS A 114 -1 O ASP A 113 N ASP A 99 CISPEP 1 SER A 162 PRO A 163 0 2.25 CRYST1 114.903 114.903 114.903 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008703 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008703 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008703 0.00000