HEADER IMMUNE SYSTEM 29-JAN-24 8VUA TITLE STRUCTURE OF FABS1CE1-EPR-1, AN ELBOW-LOCKED HIGH AFFINITY ANTIBODY TITLE 2 FOR THE ERYTHROPOEITIN RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: S1CE1 VARIANT OF FAB-EPR-1 LIGHT CHAIN; COMPND 3 CHAIN: G; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: FAB PRODUCED BY RANDOMIZATION OF CDR REGIONS AND COMPND 6 COMPND 7 SELECTED BY PHAGE DISPLAY. FABS UTILIZE IMGT (LECLERC ET COMPND 7 AL., DEV COMPND 8 COMP IMMUNOL. 2003 JAN;27(1):55-77) NUMBERING; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: S1CE1 VARIANT OF FAB-EPR-1 HEAVY CHAIN; COMPND 10 CHAIN: A; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES; COMPND 13 OTHER_DETAILS: FAB PRODUCED BY RANDOMIZATION OF CDR REGIONS AND COMPND 14 COMPND 7 SELECTED BY PHAGE DISPLAY. FABS UTILIZE IMGT (LECLERC ET COMPND 15 AL., DEV COMPND 8 COMP IMMUNOL. 2003 JAN;27(1):55-77) NUMBERING SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: EXPI293; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PSCSTA; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: EXPI293; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PSCSTA KEYWDS PROLIFERATION, ENGINEERED ANTIBODY, HIGH-AFFINITY BINDING, ENHANCED KEYWDS 2 CRYSTALLIZATION, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.U.SINGER,H.A.BRUCE,A.PAVLENCO,L.PLODER,G.LUU,L.BLAZER,J.J.ADAMS, AUTHOR 2 S.S.SIDHU REVDAT 1 10-JUL-24 8VUA 0 JRNL AUTH H.A.BRUCE,A.U.SINGER,L.L.BLAZER,K.LUU,L.PLODER,A.PAVLENCO, JRNL AUTH 2 I.KURINOV,J.J.ADAMS,S.S.SIDHU JRNL TITL ANTIGEN-BINDING FRAGMENTS WITH IMPROVED CRYSTAL LATTICE JRNL TITL 2 PACKING AND ENHANCED CONFORMATIONAL FLEXIBILITY AT THE ELBOW JRNL TITL 3 REGION AS CRYSTALLIZATION CHAPERONES. JRNL REF PROTEIN SCI. V. 33 E5081 2024 JRNL REFN ESSN 1469-896X JRNL PMID 38924648 JRNL DOI 10.1002/PRO.5081 REMARK 2 REMARK 2 RESOLUTION. 3.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 7741 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.210 REMARK 3 FREE R VALUE TEST SET COUNT : 403 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 58.4000 - 4.7200 1.00 2543 139 0.2092 0.2846 REMARK 3 2 4.7100 - 3.7400 1.00 2414 131 0.2804 0.2522 REMARK 3 3 3.7400 - 3.2700 1.00 2381 133 0.3829 0.3570 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.497 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.126 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 139.2 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 143.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3210 REMARK 3 ANGLE : 0.609 4392 REMARK 3 CHIRALITY : 0.043 508 REMARK 3 PLANARITY : 0.013 565 REMARK 3 DIHEDRAL : 5.014 462 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 2 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6888 34.6028 5.7568 REMARK 3 T TENSOR REMARK 3 T11: 2.1848 T22: 1.2290 REMARK 3 T33: 1.3436 T12: 0.5085 REMARK 3 T13: -0.1350 T23: 0.1772 REMARK 3 L TENSOR REMARK 3 L11: 4.8061 L22: 3.2441 REMARK 3 L33: 3.1106 L12: 0.4094 REMARK 3 L13: -0.0779 L23: 3.7184 REMARK 3 S TENSOR REMARK 3 S11: 0.3608 S12: 0.8822 S13: 0.6969 REMARK 3 S21: 0.6098 S22: 0.1798 S23: 0.7956 REMARK 3 S31: 0.6723 S32: -0.3432 S33: -0.9846 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 39 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.0553 28.9658 12.7089 REMARK 3 T TENSOR REMARK 3 T11: 1.4445 T22: 1.0893 REMARK 3 T33: 1.1403 T12: 0.3655 REMARK 3 T13: 0.0653 T23: 0.0839 REMARK 3 L TENSOR REMARK 3 L11: 8.7587 L22: 8.1051 REMARK 3 L33: 4.3161 L12: -0.7442 REMARK 3 L13: -2.4185 L23: 3.2898 REMARK 3 S TENSOR REMARK 3 S11: 0.3928 S12: 0.6364 S13: 0.0885 REMARK 3 S21: -0.5566 S22: -0.2395 S23: 0.1330 REMARK 3 S31: -0.4044 S32: -0.7134 S33: -0.0136 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 109 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0821 42.1438 17.9267 REMARK 3 T TENSOR REMARK 3 T11: 1.7645 T22: 1.0192 REMARK 3 T33: 1.2345 T12: 0.3999 REMARK 3 T13: 0.3996 T23: 0.3071 REMARK 3 L TENSOR REMARK 3 L11: 6.7423 L22: 0.8148 REMARK 3 L33: 2.6322 L12: 1.8685 REMARK 3 L13: 3.9032 L23: 1.8134 REMARK 3 S TENSOR REMARK 3 S11: -0.2590 S12: 0.6477 S13: 0.2443 REMARK 3 S21: -0.3223 S22: 0.0055 S23: -0.2239 REMARK 3 S31: 0.1331 S32: 0.2027 S33: 0.1548 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 160 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4518 48.8273 15.4930 REMARK 3 T TENSOR REMARK 3 T11: 1.6566 T22: 1.1187 REMARK 3 T33: 1.2723 T12: 0.4496 REMARK 3 T13: 0.0021 T23: 0.1277 REMARK 3 L TENSOR REMARK 3 L11: 7.4090 L22: 5.6719 REMARK 3 L33: 3.5251 L12: 0.1163 REMARK 3 L13: 0.6271 L23: 0.5285 REMARK 3 S TENSOR REMARK 3 S11: 0.8662 S12: 1.4611 S13: 0.1171 REMARK 3 S21: -0.4095 S22: -0.3093 S23: 0.5866 REMARK 3 S31: 0.2956 S32: 0.2765 S33: -0.2908 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 193 THROUGH 232 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2731 52.8255 19.9809 REMARK 3 T TENSOR REMARK 3 T11: 1.4472 T22: 1.0222 REMARK 3 T33: 1.2462 T12: 0.3368 REMARK 3 T13: 0.2579 T23: 0.0605 REMARK 3 L TENSOR REMARK 3 L11: 8.0258 L22: 5.9713 REMARK 3 L33: 2.8502 L12: -0.3642 REMARK 3 L13: 2.9679 L23: -0.0837 REMARK 3 S TENSOR REMARK 3 S11: -0.2827 S12: 0.5737 S13: 0.9954 REMARK 3 S21: -0.4211 S22: 0.2868 S23: -0.8728 REMARK 3 S31: -0.2859 S32: 0.4183 S33: -0.2370 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6360 2.0384 -2.9072 REMARK 3 T TENSOR REMARK 3 T11: 0.8930 T22: 1.2321 REMARK 3 T33: 1.1452 T12: -0.1010 REMARK 3 T13: 0.2113 T23: -0.2340 REMARK 3 L TENSOR REMARK 3 L11: 8.8418 L22: 8.1125 REMARK 3 L33: 8.9275 L12: -0.6924 REMARK 3 L13: -0.9010 L23: -3.2263 REMARK 3 S TENSOR REMARK 3 S11: 0.2012 S12: -0.8864 S13: -0.1183 REMARK 3 S21: 0.7881 S22: -0.0503 S23: 0.8389 REMARK 3 S31: -0.4748 S32: -0.0942 S33: -0.1631 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2531 35.7462 26.4564 REMARK 3 T TENSOR REMARK 3 T11: 1.2200 T22: 0.8615 REMARK 3 T33: 1.1260 T12: 0.4064 REMARK 3 T13: 0.1185 T23: 0.1104 REMARK 3 L TENSOR REMARK 3 L11: 5.2573 L22: 3.3340 REMARK 3 L33: 6.4579 L12: 3.8663 REMARK 3 L13: 0.9373 L23: -4.2555 REMARK 3 S TENSOR REMARK 3 S11: -0.1707 S12: -0.2513 S13: -0.3447 REMARK 3 S21: 0.5139 S22: 0.0326 S23: 0.0589 REMARK 3 S31: 0.3160 S32: 0.4265 S33: 0.0406 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8VUA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1000280087. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-APR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8839 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.130 REMARK 200 RESOLUTION RANGE LOW (A) : 153.370 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.50 REMARK 200 R MERGE FOR SHELL (I) : 2.01700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES 7.0, 30% JEFFAMINE ED REMARK 280 -2003, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.12200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 102.24400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 102.24400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 51.12200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP G 1 REMARK 465 ASP A 231 REMARK 465 LYS A 232 REMARK 465 THR A 233 REMARK 465 HIS A 234 REMARK 465 THR A 235 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE G 2 CG1 CG2 CD1 REMARK 470 GLN G 3 CG CD OE1 NE2 REMARK 470 ARG G 24 CG CD NE CZ NH1 NH2 REMARK 470 GLN G 27 CG CD OE1 NE2 REMARK 470 LYS G 51 CD CE NZ REMARK 470 ARG G 80 CG CD NE CZ NH1 NH2 REMARK 470 TYR G 109 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU G 115 CG CD1 CD2 REMARK 470 GLN G 120 CD OE1 NE2 REMARK 470 LYS G 123 CG CD CE NZ REMARK 470 LYS G 127 CG CD CE NZ REMARK 470 LYS G 146 CE NZ REMARK 470 LYS G 165 CG CD CE NZ REMARK 470 LYS G 189 CG CD CE NZ REMARK 470 LYS G 208 CG CD CE NZ REMARK 470 LYS G 210 CG CD CE NZ REMARK 470 GLU A 1 CG CD OE1 OE2 REMARK 470 ARG A 35 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 TYR A 62 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 72 CG CD CE NZ REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 LEU A 94 CG CD1 CD2 REMARK 470 PHE A 127 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 129 CG CD OE1 NE2 REMARK 470 LYS A 131 CG CD CE NZ REMARK 470 LYS A 215 CD CE NZ REMARK 470 LYS A 220 CD CE NZ REMARK 470 LYS A 228 CG CD CE NZ REMARK 470 CYS A 230 SG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA G 38 92.18 -68.73 REMARK 500 ALA G 57 14.29 49.65 REMARK 500 ARG G 75 -39.57 -38.03 REMARK 500 SER G 83 53.68 -90.56 REMARK 500 SER G 108 -158.81 -85.20 REMARK 500 TYR G 109 92.39 -64.18 REMARK 500 SER G 114 30.00 48.60 REMARK 500 PRO G 161 -163.29 -79.03 REMARK 500 VAL A 53 -60.95 -101.77 REMARK 500 TYR A 59 -65.23 60.67 REMARK 500 TYR A 109 -110.32 50.79 REMARK 500 PHE A 127 -164.40 -78.55 REMARK 500 GLN A 129 157.76 72.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 106 0.15 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8VTP RELATED DB: PDB REMARK 900 RELATED ID: 8VTR RELATED DB: PDB REMARK 900 RELATED ID: 8VU1 RELATED DB: PDB REMARK 900 RELATED ID: 8VU4 RELATED DB: PDB REMARK 900 RELATED ID: 8VUC RELATED DB: PDB REMARK 900 RELATED ID: 8VUI RELATED DB: PDB DBREF 8VUA G 1 232 PDB 8VUA 8VUA 1 232 DBREF 8VUA A 1 235 PDB 8VUA 8VUA 1 235 SEQRES 1 G 212 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 G 212 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 G 212 GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN LYS SEQRES 4 G 212 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SER SEQRES 5 G 212 SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 G 212 ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 G 212 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SER SEQRES 8 G 212 SER TYR SER LEU ILE THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 G 212 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 G 212 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 G 212 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 G 212 ALA LYS VAL SER TRP TYR VAL ASP ASN ALA LEU GLN SER SEQRES 13 G 212 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 G 212 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 G 212 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 G 212 VAL THR GLN GLY THR THR SER VAL THR LYS SER PHE ASN SEQRES 17 G 212 ARG GLY GLU CYS SEQRES 1 A 224 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 A 224 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 224 PHE ASN LEU ARG SER TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 A 224 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SER ILE SER SEQRES 5 A 224 PRO TYR TYR SER TYR THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 A 224 GLY ARG PHE THR ILE SER ALA ASP THR SER LYS ASN THR SEQRES 7 A 224 ALA TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 A 224 ALA VAL TYR TYR CYS ALA ARG HIS GLY TYR GLY ALA MET SEQRES 9 A 224 ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL PHE ASN SEQRES 10 A 224 GLN ILE LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 11 A 224 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 12 A 224 LEU VAL LYS ASP TYR PHE PRO GLY PRO VAL THR VAL SER SEQRES 13 A 224 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 14 A 224 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 15 A 224 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 16 A 224 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 17 A 224 LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS ASP LYS SEQRES 18 A 224 THR HIS THR HELIX 1 AA1 GLN G 95 PHE G 99 5 5 HELIX 2 AA2 SER G 141 GLY G 148 1 8 HELIX 3 AA3 LYS G 203 LYS G 208 1 6 HELIX 4 AA4 ASN A 29 TYR A 37 5 5 HELIX 5 AA5 SER A 170 ALA A 172 5 3 HELIX 6 AA6 SER A 201 GLN A 206 1 6 SHEET 1 AA1 4 THR G 5 SER G 7 0 SHEET 2 AA1 4 VAL G 19 ARG G 24 -1 O THR G 22 N SER G 7 SHEET 3 AA1 4 ASP G 86 ILE G 91 -1 O PHE G 87 N CYS G 23 SHEET 4 AA1 4 PHE G 76 SER G 83 -1 N SER G 77 O THR G 90 SHEET 1 AA2 6 SER G 10 SER G 14 0 SHEET 2 AA2 6 THR G 122 LYS G 127 1 O GLU G 125 N LEU G 11 SHEET 3 AA2 6 ALA G 100 SER G 108 -1 N ALA G 100 O VAL G 124 SHEET 4 AA2 6 VAL G 39 GLN G 44 -1 N GLN G 44 O THR G 101 SHEET 5 AA2 6 LYS G 51 TYR G 55 -1 O LEU G 53 N TRP G 41 SHEET 6 AA2 6 SER G 66 LEU G 67 -1 O SER G 66 N TYR G 55 SHEET 1 AA3 4 SER G 10 SER G 14 0 SHEET 2 AA3 4 THR G 122 LYS G 127 1 O GLU G 125 N LEU G 11 SHEET 3 AA3 4 ALA G 100 SER G 108 -1 N ALA G 100 O VAL G 124 SHEET 4 AA3 4 LEU G 115 PHE G 118 -1 O THR G 117 N GLN G 106 SHEET 1 AA4 4 SER G 134 PHE G 138 0 SHEET 2 AA4 4 THR G 149 PHE G 159 -1 O LEU G 155 N PHE G 136 SHEET 3 AA4 4 TYR G 193 SER G 202 -1 O LEU G 201 N ALA G 150 SHEET 4 AA4 4 SER G 179 VAL G 183 -1 N GLN G 180 O THR G 198 SHEET 1 AA5 4 ALA G 173 LEU G 174 0 SHEET 2 AA5 4 LYS G 165 VAL G 170 -1 N VAL G 170 O ALA G 173 SHEET 3 AA5 4 VAL G 211 GLN G 218 -1 O GLU G 215 N SER G 167 SHEET 4 AA5 4 THR G 221 ASN G 228 -1 O THR G 221 N GLN G 218 SHEET 1 AA6 4 GLN A 3 SER A 7 0 SHEET 2 AA6 4 GLY A 16 SER A 26 -1 O SER A 22 N SER A 7 SHEET 3 AA6 4 THR A 86 LEU A 94 -1 O MET A 91 N LEU A 19 SHEET 4 AA6 4 PHE A 76 ASP A 81 -1 N SER A 79 O TYR A 88 SHEET 1 AA7 6 GLY A 11 VAL A 13 0 SHEET 2 AA7 6 THR A 122 VAL A 126 1 O THR A 125 N GLY A 11 SHEET 3 AA7 6 ALA A 100 GLY A 108 -1 N TYR A 102 O THR A 122 SHEET 4 AA7 6 MET A 39 GLN A 44 -1 N VAL A 42 O TYR A 103 SHEET 5 AA7 6 LEU A 50 ILE A 56 -1 O VAL A 53 N TRP A 41 SHEET 6 AA7 6 TYR A 66 TYR A 67 -1 O TYR A 66 N SER A 55 SHEET 1 AA8 4 GLY A 11 VAL A 13 0 SHEET 2 AA8 4 THR A 122 VAL A 126 1 O THR A 125 N GLY A 11 SHEET 3 AA8 4 ALA A 100 GLY A 108 -1 N TYR A 102 O THR A 122 SHEET 4 AA8 4 ALA A 114 TRP A 118 -1 O ALA A 114 N GLY A 108 SHEET 1 AA9 4 SER A 134 LEU A 138 0 SHEET 2 AA9 4 THR A 149 TYR A 159 -1 O LEU A 155 N PHE A 136 SHEET 3 AA9 4 TYR A 190 PRO A 199 -1 O VAL A 198 N ALA A 150 SHEET 4 AA9 4 HIS A 178 THR A 179 -1 N HIS A 178 O VAL A 195 SHEET 1 AB1 4 SER A 134 LEU A 138 0 SHEET 2 AB1 4 THR A 149 TYR A 159 -1 O LEU A 155 N PHE A 136 SHEET 3 AB1 4 TYR A 190 PRO A 199 -1 O VAL A 198 N ALA A 150 SHEET 4 AB1 4 VAL A 183 LEU A 184 -1 N VAL A 183 O SER A 191 SHEET 1 AB2 3 THR A 165 TRP A 168 0 SHEET 2 AB2 3 TYR A 208 HIS A 214 -1 O ASN A 211 N SER A 167 SHEET 3 AB2 3 THR A 219 VAL A 225 -1 O THR A 219 N HIS A 214 SSBOND 1 CYS G 23 CYS G 104 1555 1555 2.04 SSBOND 2 CYS G 154 CYS G 214 1555 1555 2.03 SSBOND 3 CYS A 23 CYS A 104 1555 1555 2.03 SSBOND 4 CYS A 154 CYS A 210 1555 1555 2.04 CISPEP 1 SER G 7 PRO G 8 0 -5.36 CISPEP 2 TYR G 160 PRO G 161 0 2.85 CISPEP 3 PHE A 160 PRO A 161 0 -6.75 CISPEP 4 GLY A 162 PRO A 163 0 -4.79 CRYST1 72.933 72.933 153.366 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013711 0.007916 0.000000 0.00000 SCALE2 0.000000 0.015832 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006520 0.00000