data_8W5E # _entry.id 8W5E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.402 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8W5E pdb_00008w5e 10.2210/pdb8w5e/pdb WWPDB D_1300040590 ? ? EMDB EMD-37287 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-02-26 ? 2 'EM metadata' 1 0 2025-02-26 ? 3 'Half map' 1 0 2025-02-26 1 4 'Half map' 1 0 2025-02-26 2 5 Image 1 0 2025-02-26 ? 6 'Primary map' 1 0 2025-02-26 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Half map' repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 Image repository 'Initial release' ? ? 6 6 'Primary map' repository 'Initial release' ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8W5E _pdbx_database_status.recvd_initial_deposition_date 2023-08-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of Qb-Ab4' _pdbx_database_related.db_id EMD-37287 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email zhup@ibp.ac.cn _pdbx_contact_author.name_first Ping _pdbx_contact_author.name_last Zhu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2648-3170 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bao, K.Y.' 1 ? 'Li, R.H.' 2 ? 'Hua, Z.L.' 3 ? 'Hou, B.D.' 4 ? 'Zhu, P.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2211-1247 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 44 _citation.language ? _citation.page_first 115334 _citation.page_last 115334 _citation.title 'Competition propels, rather than limits, the success of low-affinity B cells in the germinal center response.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.celrep.2025.115334 _citation.pdbx_database_id_PubMed 39955776 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, R.' 1 ? primary 'Bao, K.' 2 ? primary 'Liu, C.' 3 ? primary 'Ma, X.' 4 ? primary 'Hua, Z.' 5 ? primary 'Zhu, P.' 6 ? primary 'Hou, B.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Heavy chain of Ab4' 13855.258 1 ? ? ? ? 2 polymer man 'Minor capsid protein A1' 14268.071 2 ? ? ? ? 3 polymer man 'Light chain of Ab4' 12101.261 1 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Qb coat protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;VHSEVQLVESGGGLVQPGGSLKLSCAASGFTFSDYGMAWVRQAPRKGPEWVAFISNLAYSIYYADTVTGRFTI(SEP)RE NAKNTLYLEMSSLRSEDTAMYYCARQNFDSSFYFDYWGRGTTLTVSSA ; ;VHSEVQLVESGGGLVQPGGSLKLSCAASGFTFSDYGMAWVRQAPRKGPEWVAFISNLAYSIYYADTVTGRFTISRENAKN TLYLEMSSLRSEDTAMYYCARQNFDSSFYFDYWGRGTTLTVSSA ; H ? 2 'polypeptide(L)' no no ;MAKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGS CDPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAY ; ;MAKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGS CDPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAY ; c,C ? 3 'polypeptide(L)' no yes ;VHSETTVTQSPASL(SEP)VATGEKVTIRCITSTDIDDDMNWYQQKPGEPPKLLISEGNTLRPGVPSRFSSSGYGTDFVF TIENTLSEDVADYYCLQSDNMPLTFGAGTKLEIK ; ;VHSETTVTQSPASLSVATGEKVTIRCITSTDIDDDMNWYQQKPGEPPKLLISEGNTLRPGVPSRFSSSGYGTDFVFTIEN TLSEDVADYYCLQSDNMPLTFGAGTKLEIK ; L ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 HIS n 1 3 SER n 1 4 GLU n 1 5 VAL n 1 6 GLN n 1 7 LEU n 1 8 VAL n 1 9 GLU n 1 10 SER n 1 11 GLY n 1 12 GLY n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 GLN n 1 17 PRO n 1 18 GLY n 1 19 GLY n 1 20 SER n 1 21 LEU n 1 22 LYS n 1 23 LEU n 1 24 SER n 1 25 CYS n 1 26 ALA n 1 27 ALA n 1 28 SER n 1 29 GLY n 1 30 PHE n 1 31 THR n 1 32 PHE n 1 33 SER n 1 34 ASP n 1 35 TYR n 1 36 GLY n 1 37 MET n 1 38 ALA n 1 39 TRP n 1 40 VAL n 1 41 ARG n 1 42 GLN n 1 43 ALA n 1 44 PRO n 1 45 ARG n 1 46 LYS n 1 47 GLY n 1 48 PRO n 1 49 GLU n 1 50 TRP n 1 51 VAL n 1 52 ALA n 1 53 PHE n 1 54 ILE n 1 55 SER n 1 56 ASN n 1 57 LEU n 1 58 ALA n 1 59 TYR n 1 60 SER n 1 61 ILE n 1 62 TYR n 1 63 TYR n 1 64 ALA n 1 65 ASP n 1 66 THR n 1 67 VAL n 1 68 THR n 1 69 GLY n 1 70 ARG n 1 71 PHE n 1 72 THR n 1 73 ILE n 1 74 SEP n 1 75 ARG n 1 76 GLU n 1 77 ASN n 1 78 ALA n 1 79 LYS n 1 80 ASN n 1 81 THR n 1 82 LEU n 1 83 TYR n 1 84 LEU n 1 85 GLU n 1 86 MET n 1 87 SER n 1 88 SER n 1 89 LEU n 1 90 ARG n 1 91 SER n 1 92 GLU n 1 93 ASP n 1 94 THR n 1 95 ALA n 1 96 MET n 1 97 TYR n 1 98 TYR n 1 99 CYS n 1 100 ALA n 1 101 ARG n 1 102 GLN n 1 103 ASN n 1 104 PHE n 1 105 ASP n 1 106 SER n 1 107 SER n 1 108 PHE n 1 109 TYR n 1 110 PHE n 1 111 ASP n 1 112 TYR n 1 113 TRP n 1 114 GLY n 1 115 ARG n 1 116 GLY n 1 117 THR n 1 118 THR n 1 119 LEU n 1 120 THR n 1 121 VAL n 1 122 SER n 1 123 SER n 1 124 ALA n 2 1 MET n 2 2 ALA n 2 3 LYS n 2 4 LEU n 2 5 GLU n 2 6 THR n 2 7 VAL n 2 8 THR n 2 9 LEU n 2 10 GLY n 2 11 ASN n 2 12 ILE n 2 13 GLY n 2 14 LYS n 2 15 ASP n 2 16 GLY n 2 17 LYS n 2 18 GLN n 2 19 THR n 2 20 LEU n 2 21 VAL n 2 22 LEU n 2 23 ASN n 2 24 PRO n 2 25 ARG n 2 26 GLY n 2 27 VAL n 2 28 ASN n 2 29 PRO n 2 30 THR n 2 31 ASN n 2 32 GLY n 2 33 VAL n 2 34 ALA n 2 35 SER n 2 36 LEU n 2 37 SER n 2 38 GLN n 2 39 ALA n 2 40 GLY n 2 41 ALA n 2 42 VAL n 2 43 PRO n 2 44 ALA n 2 45 LEU n 2 46 GLU n 2 47 LYS n 2 48 ARG n 2 49 VAL n 2 50 THR n 2 51 VAL n 2 52 SER n 2 53 VAL n 2 54 SER n 2 55 GLN n 2 56 PRO n 2 57 SER n 2 58 ARG n 2 59 ASN n 2 60 ARG n 2 61 LYS n 2 62 ASN n 2 63 TYR n 2 64 LYS n 2 65 VAL n 2 66 GLN n 2 67 VAL n 2 68 LYS n 2 69 ILE n 2 70 GLN n 2 71 ASN n 2 72 PRO n 2 73 THR n 2 74 ALA n 2 75 CYS n 2 76 THR n 2 77 ALA n 2 78 ASN n 2 79 GLY n 2 80 SER n 2 81 CYS n 2 82 ASP n 2 83 PRO n 2 84 SER n 2 85 VAL n 2 86 THR n 2 87 ARG n 2 88 GLN n 2 89 ALA n 2 90 TYR n 2 91 ALA n 2 92 ASP n 2 93 VAL n 2 94 THR n 2 95 PHE n 2 96 SER n 2 97 PHE n 2 98 THR n 2 99 GLN n 2 100 TYR n 2 101 SER n 2 102 THR n 2 103 ASP n 2 104 GLU n 2 105 GLU n 2 106 ARG n 2 107 ALA n 2 108 PHE n 2 109 VAL n 2 110 ARG n 2 111 THR n 2 112 GLU n 2 113 LEU n 2 114 ALA n 2 115 ALA n 2 116 LEU n 2 117 LEU n 2 118 ALA n 2 119 SER n 2 120 PRO n 2 121 LEU n 2 122 LEU n 2 123 ILE n 2 124 ASP n 2 125 ALA n 2 126 ILE n 2 127 ASP n 2 128 GLN n 2 129 LEU n 2 130 ASN n 2 131 PRO n 2 132 ALA n 2 133 TYR n 3 1 VAL n 3 2 HIS n 3 3 SER n 3 4 GLU n 3 5 THR n 3 6 THR n 3 7 VAL n 3 8 THR n 3 9 GLN n 3 10 SER n 3 11 PRO n 3 12 ALA n 3 13 SER n 3 14 LEU n 3 15 SEP n 3 16 VAL n 3 17 ALA n 3 18 THR n 3 19 GLY n 3 20 GLU n 3 21 LYS n 3 22 VAL n 3 23 THR n 3 24 ILE n 3 25 ARG n 3 26 CYS n 3 27 ILE n 3 28 THR n 3 29 SER n 3 30 THR n 3 31 ASP n 3 32 ILE n 3 33 ASP n 3 34 ASP n 3 35 ASP n 3 36 MET n 3 37 ASN n 3 38 TRP n 3 39 TYR n 3 40 GLN n 3 41 GLN n 3 42 LYS n 3 43 PRO n 3 44 GLY n 3 45 GLU n 3 46 PRO n 3 47 PRO n 3 48 LYS n 3 49 LEU n 3 50 LEU n 3 51 ILE n 3 52 SER n 3 53 GLU n 3 54 GLY n 3 55 ASN n 3 56 THR n 3 57 LEU n 3 58 ARG n 3 59 PRO n 3 60 GLY n 3 61 VAL n 3 62 PRO n 3 63 SER n 3 64 ARG n 3 65 PHE n 3 66 SER n 3 67 SER n 3 68 SER n 3 69 GLY n 3 70 TYR n 3 71 GLY n 3 72 THR n 3 73 ASP n 3 74 PHE n 3 75 VAL n 3 76 PHE n 3 77 THR n 3 78 ILE n 3 79 GLU n 3 80 ASN n 3 81 THR n 3 82 LEU n 3 83 SER n 3 84 GLU n 3 85 ASP n 3 86 VAL n 3 87 ALA n 3 88 ASP n 3 89 TYR n 3 90 TYR n 3 91 CYS n 3 92 LEU n 3 93 GLN n 3 94 SER n 3 95 ASP n 3 96 ASN n 3 97 MET n 3 98 PRO n 3 99 LEU n 3 100 THR n 3 101 PHE n 3 102 GLY n 3 103 ALA n 3 104 GLY n 3 105 THR n 3 106 LYS n 3 107 LEU n 3 108 GLU n 3 109 ILE n 3 110 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 124 ? ? ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 133 ? ? ? ? ? ? ? ? ? 'Escherichia phage Qbeta' 2789016 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 110 ? ? ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SEP 'L-peptide linking' n PHOSPHOSERINE PHOSPHONOSERINE 'C3 H8 N O6 P' 185.072 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 ? ? ? H . n A 1 2 HIS 2 2 ? ? ? H . n A 1 3 SER 3 3 ? ? ? H . n A 1 4 GLU 4 4 ? ? ? H . n A 1 5 VAL 5 5 5 VAL VAL H . n A 1 6 GLN 6 6 6 GLN GLN H . n A 1 7 LEU 7 7 7 LEU LEU H . n A 1 8 VAL 8 8 8 VAL VAL H . n A 1 9 GLU 9 9 9 GLU GLU H . n A 1 10 SER 10 10 10 SER SER H . n A 1 11 GLY 11 11 11 GLY GLY H . n A 1 12 GLY 12 12 12 GLY GLY H . n A 1 13 GLY 13 13 13 GLY GLY H . n A 1 14 LEU 14 14 14 LEU LEU H . n A 1 15 VAL 15 15 15 VAL VAL H . n A 1 16 GLN 16 16 16 GLN GLN H . n A 1 17 PRO 17 17 17 PRO PRO H . n A 1 18 GLY 18 18 18 GLY GLY H . n A 1 19 GLY 19 19 19 GLY GLY H . n A 1 20 SER 20 20 20 SER SER H . n A 1 21 LEU 21 21 21 LEU LEU H . n A 1 22 LYS 22 22 22 LYS LYS H . n A 1 23 LEU 23 23 23 LEU LEU H . n A 1 24 SER 24 24 24 SER SER H . n A 1 25 CYS 25 25 25 CYS CYS H . n A 1 26 ALA 26 26 26 ALA ALA H . n A 1 27 ALA 27 27 27 ALA ALA H . n A 1 28 SER 28 28 28 SER SER H . n A 1 29 GLY 29 29 29 GLY GLY H . n A 1 30 PHE 30 30 30 PHE PHE H . n A 1 31 THR 31 31 31 THR THR H . n A 1 32 PHE 32 32 32 PHE PHE H . n A 1 33 SER 33 33 33 SER SER H . n A 1 34 ASP 34 34 34 ASP ASP H . n A 1 35 TYR 35 35 35 TYR TYR H . n A 1 36 GLY 36 36 36 GLY GLY H . n A 1 37 MET 37 37 37 MET MET H . n A 1 38 ALA 38 38 38 ALA ALA H . n A 1 39 TRP 39 39 39 TRP TRP H . n A 1 40 VAL 40 40 40 VAL VAL H . n A 1 41 ARG 41 41 41 ARG ARG H . n A 1 42 GLN 42 42 42 GLN GLN H . n A 1 43 ALA 43 43 43 ALA ALA H . n A 1 44 PRO 44 44 44 PRO PRO H . n A 1 45 ARG 45 45 45 ARG ARG H . n A 1 46 LYS 46 46 46 LYS LYS H . n A 1 47 GLY 47 47 47 GLY GLY H . n A 1 48 PRO 48 48 48 PRO PRO H . n A 1 49 GLU 49 49 49 GLU GLU H . n A 1 50 TRP 50 50 50 TRP TRP H . n A 1 51 VAL 51 51 51 VAL VAL H . n A 1 52 ALA 52 52 52 ALA ALA H . n A 1 53 PHE 53 53 53 PHE PHE H . n A 1 54 ILE 54 54 54 ILE ILE H . n A 1 55 SER 55 55 55 SER SER H . n A 1 56 ASN 56 56 56 ASN ASN H . n A 1 57 LEU 57 57 57 LEU LEU H . n A 1 58 ALA 58 58 58 ALA ALA H . n A 1 59 TYR 59 59 59 TYR TYR H . n A 1 60 SER 60 60 60 SER SER H . n A 1 61 ILE 61 61 61 ILE ILE H . n A 1 62 TYR 62 62 62 TYR TYR H . n A 1 63 TYR 63 63 63 TYR TYR H . n A 1 64 ALA 64 64 64 ALA ALA H . n A 1 65 ASP 65 65 65 ASP ASP H . n A 1 66 THR 66 66 66 THR THR H . n A 1 67 VAL 67 67 67 VAL VAL H . n A 1 68 THR 68 68 68 THR THR H . n A 1 69 GLY 69 69 69 GLY GLY H . n A 1 70 ARG 70 70 70 ARG ARG H . n A 1 71 PHE 71 71 71 PHE PHE H . n A 1 72 THR 72 72 72 THR THR H . n A 1 73 ILE 73 73 73 ILE ILE H . n A 1 74 SEP 74 74 74 SEP SEP H . n A 1 75 ARG 75 75 75 ARG ARG H . n A 1 76 GLU 76 76 76 GLU GLU H . n A 1 77 ASN 77 77 77 ASN ASN H . n A 1 78 ALA 78 78 78 ALA ALA H . n A 1 79 LYS 79 79 79 LYS LYS H . n A 1 80 ASN 80 80 80 ASN ASN H . n A 1 81 THR 81 81 81 THR THR H . n A 1 82 LEU 82 82 82 LEU LEU H . n A 1 83 TYR 83 83 83 TYR TYR H . n A 1 84 LEU 84 84 84 LEU LEU H . n A 1 85 GLU 85 85 ? ? ? H . n A 1 86 MET 86 86 ? ? ? H . n A 1 87 SER 87 87 ? ? ? H . n A 1 88 SER 88 88 ? ? ? H . n A 1 89 LEU 89 89 ? ? ? H . n A 1 90 ARG 90 90 ? ? ? H . n A 1 91 SER 91 91 ? ? ? H . n A 1 92 GLU 92 92 ? ? ? H . n A 1 93 ASP 93 93 ? ? ? H . n A 1 94 THR 94 94 ? ? ? H . n A 1 95 ALA 95 95 ? ? ? H . n A 1 96 MET 96 96 ? ? ? H . n A 1 97 TYR 97 97 ? ? ? H . n A 1 98 TYR 98 98 98 TYR TYR H . n A 1 99 CYS 99 99 99 CYS CYS H . n A 1 100 ALA 100 100 100 ALA ALA H . n A 1 101 ARG 101 101 101 ARG ARG H . n A 1 102 GLN 102 102 102 GLN GLN H . n A 1 103 ASN 103 103 103 ASN ASN H . n A 1 104 PHE 104 104 104 PHE PHE H . n A 1 105 ASP 105 105 105 ASP ASP H . n A 1 106 SER 106 106 106 SER SER H . n A 1 107 SER 107 107 107 SER SER H . n A 1 108 PHE 108 108 108 PHE PHE H . n A 1 109 TYR 109 109 109 TYR TYR H . n A 1 110 PHE 110 110 110 PHE PHE H . n A 1 111 ASP 111 111 111 ASP ASP H . n A 1 112 TYR 112 112 112 TYR TYR H . n A 1 113 TRP 113 113 113 TRP TRP H . n A 1 114 GLY 114 114 114 GLY GLY H . n A 1 115 ARG 115 115 115 ARG ARG H . n A 1 116 GLY 116 116 ? ? ? H . n A 1 117 THR 117 117 ? ? ? H . n A 1 118 THR 118 118 ? ? ? H . n A 1 119 LEU 119 119 ? ? ? H . n A 1 120 THR 120 120 ? ? ? H . n A 1 121 VAL 121 121 ? ? ? H . n A 1 122 SER 122 122 ? ? ? H . n A 1 123 SER 123 123 ? ? ? H . n A 1 124 ALA 124 124 ? ? ? H . n B 2 1 MET 1 0 ? ? ? c . n B 2 2 ALA 2 1 1 ALA ALA c . n B 2 3 LYS 3 2 2 LYS LYS c . n B 2 4 LEU 4 3 3 LEU LEU c . n B 2 5 GLU 5 4 4 GLU GLU c . n B 2 6 THR 6 5 5 THR THR c . n B 2 7 VAL 7 6 6 VAL VAL c . n B 2 8 THR 8 7 7 THR THR c . n B 2 9 LEU 9 8 8 LEU LEU c . n B 2 10 GLY 10 9 9 GLY GLY c . n B 2 11 ASN 11 10 10 ASN ASN c . n B 2 12 ILE 12 11 11 ILE ILE c . n B 2 13 GLY 13 12 12 GLY GLY c . n B 2 14 LYS 14 13 13 LYS LYS c . n B 2 15 ASP 15 14 14 ASP ASP c . n B 2 16 GLY 16 15 15 GLY GLY c . n B 2 17 LYS 17 16 16 LYS LYS c . n B 2 18 GLN 18 17 17 GLN GLN c . n B 2 19 THR 19 18 18 THR THR c . n B 2 20 LEU 20 19 19 LEU LEU c . n B 2 21 VAL 21 20 20 VAL VAL c . n B 2 22 LEU 22 21 21 LEU LEU c . n B 2 23 ASN 23 22 22 ASN ASN c . n B 2 24 PRO 24 23 23 PRO PRO c . n B 2 25 ARG 25 24 24 ARG ARG c . n B 2 26 GLY 26 25 25 GLY GLY c . n B 2 27 VAL 27 26 26 VAL VAL c . n B 2 28 ASN 28 27 27 ASN ASN c . n B 2 29 PRO 29 28 28 PRO PRO c . n B 2 30 THR 30 29 29 THR THR c . n B 2 31 ASN 31 30 30 ASN ASN c . n B 2 32 GLY 32 31 31 GLY GLY c . n B 2 33 VAL 33 32 32 VAL VAL c . n B 2 34 ALA 34 33 33 ALA ALA c . n B 2 35 SER 35 34 34 SER SER c . n B 2 36 LEU 36 35 35 LEU LEU c . n B 2 37 SER 37 36 36 SER SER c . n B 2 38 GLN 38 37 37 GLN GLN c . n B 2 39 ALA 39 38 38 ALA ALA c . n B 2 40 GLY 40 39 39 GLY GLY c . n B 2 41 ALA 41 40 40 ALA ALA c . n B 2 42 VAL 42 41 41 VAL VAL c . n B 2 43 PRO 43 42 42 PRO PRO c . n B 2 44 ALA 44 43 43 ALA ALA c . n B 2 45 LEU 45 44 44 LEU LEU c . n B 2 46 GLU 46 45 45 GLU GLU c . n B 2 47 LYS 47 46 46 LYS LYS c . n B 2 48 ARG 48 47 47 ARG ARG c . n B 2 49 VAL 49 48 48 VAL VAL c . n B 2 50 THR 50 49 49 THR THR c . n B 2 51 VAL 51 50 50 VAL VAL c . n B 2 52 SER 52 51 51 SER SER c . n B 2 53 VAL 53 52 52 VAL VAL c . n B 2 54 SER 54 53 53 SER SER c . n B 2 55 GLN 55 54 54 GLN GLN c . n B 2 56 PRO 56 55 55 PRO PRO c . n B 2 57 SER 57 56 ? ? ? c . n B 2 58 ARG 58 57 ? ? ? c . n B 2 59 ASN 59 58 ? ? ? c . n B 2 60 ARG 60 59 ? ? ? c . n B 2 61 LYS 61 60 60 LYS LYS c . n B 2 62 ASN 62 61 61 ASN ASN c . n B 2 63 TYR 63 62 62 TYR TYR c . n B 2 64 LYS 64 63 63 LYS LYS c . n B 2 65 VAL 65 64 64 VAL VAL c . n B 2 66 GLN 66 65 65 GLN GLN c . n B 2 67 VAL 67 66 66 VAL VAL c . n B 2 68 LYS 68 67 67 LYS LYS c . n B 2 69 ILE 69 68 68 ILE ILE c . n B 2 70 GLN 70 69 69 GLN GLN c . n B 2 71 ASN 71 70 70 ASN ASN c . n B 2 72 PRO 72 71 71 PRO PRO c . n B 2 73 THR 73 72 72 THR THR c . n B 2 74 ALA 74 73 73 ALA ALA c . n B 2 75 CYS 75 74 74 CYS CYS c . n B 2 76 THR 76 75 75 THR THR c . n B 2 77 ALA 77 76 76 ALA ALA c . n B 2 78 ASN 78 77 77 ASN ASN c . n B 2 79 GLY 79 78 78 GLY GLY c . n B 2 80 SER 80 79 79 SER SER c . n B 2 81 CYS 81 80 80 CYS CYS c . n B 2 82 ASP 82 81 81 ASP ASP c . n B 2 83 PRO 83 82 82 PRO PRO c . n B 2 84 SER 84 83 83 SER SER c . n B 2 85 VAL 85 84 84 VAL VAL c . n B 2 86 THR 86 85 85 THR THR c . n B 2 87 ARG 87 86 86 ARG ARG c . n B 2 88 GLN 88 87 87 GLN GLN c . n B 2 89 ALA 89 88 88 ALA ALA c . n B 2 90 TYR 90 89 89 TYR TYR c . n B 2 91 ALA 91 90 90 ALA ALA c . n B 2 92 ASP 92 91 91 ASP ASP c . n B 2 93 VAL 93 92 92 VAL VAL c . n B 2 94 THR 94 93 93 THR THR c . n B 2 95 PHE 95 94 94 PHE PHE c . n B 2 96 SER 96 95 95 SER SER c . n B 2 97 PHE 97 96 96 PHE PHE c . n B 2 98 THR 98 97 97 THR THR c . n B 2 99 GLN 99 98 98 GLN GLN c . n B 2 100 TYR 100 99 99 TYR TYR c . n B 2 101 SER 101 100 100 SER SER c . n B 2 102 THR 102 101 101 THR THR c . n B 2 103 ASP 103 102 102 ASP ASP c . n B 2 104 GLU 104 103 103 GLU GLU c . n B 2 105 GLU 105 104 104 GLU GLU c . n B 2 106 ARG 106 105 105 ARG ARG c . n B 2 107 ALA 107 106 106 ALA ALA c . n B 2 108 PHE 108 107 107 PHE PHE c . n B 2 109 VAL 109 108 108 VAL VAL c . n B 2 110 ARG 110 109 109 ARG ARG c . n B 2 111 THR 111 110 110 THR THR c . n B 2 112 GLU 112 111 111 GLU GLU c . n B 2 113 LEU 113 112 112 LEU LEU c . n B 2 114 ALA 114 113 113 ALA ALA c . n B 2 115 ALA 115 114 114 ALA ALA c . n B 2 116 LEU 116 115 115 LEU LEU c . n B 2 117 LEU 117 116 116 LEU LEU c . n B 2 118 ALA 118 117 117 ALA ALA c . n B 2 119 SER 119 118 118 SER SER c . n B 2 120 PRO 120 119 119 PRO PRO c . n B 2 121 LEU 121 120 120 LEU LEU c . n B 2 122 LEU 122 121 121 LEU LEU c . n B 2 123 ILE 123 122 122 ILE ILE c . n B 2 124 ASP 124 123 123 ASP ASP c . n B 2 125 ALA 125 124 124 ALA ALA c . n B 2 126 ILE 126 125 125 ILE ILE c . n B 2 127 ASP 127 126 126 ASP ASP c . n B 2 128 GLN 128 127 127 GLN GLN c . n B 2 129 LEU 129 128 128 LEU LEU c . n B 2 130 ASN 130 129 129 ASN ASN c . n B 2 131 PRO 131 130 130 PRO PRO c . n B 2 132 ALA 132 131 131 ALA ALA c . n B 2 133 TYR 133 132 ? ? ? c . n C 2 1 MET 1 0 ? ? ? C . n C 2 2 ALA 2 1 1 ALA ALA C . n C 2 3 LYS 3 2 2 LYS LYS C . n C 2 4 LEU 4 3 3 LEU LEU C . n C 2 5 GLU 5 4 4 GLU GLU C . n C 2 6 THR 6 5 5 THR THR C . n C 2 7 VAL 7 6 6 VAL VAL C . n C 2 8 THR 8 7 7 THR THR C . n C 2 9 LEU 9 8 8 LEU LEU C . n C 2 10 GLY 10 9 9 GLY GLY C . n C 2 11 ASN 11 10 10 ASN ASN C . n C 2 12 ILE 12 11 11 ILE ILE C . n C 2 13 GLY 13 12 12 GLY GLY C . n C 2 14 LYS 14 13 13 LYS LYS C . n C 2 15 ASP 15 14 14 ASP ASP C . n C 2 16 GLY 16 15 15 GLY GLY C . n C 2 17 LYS 17 16 16 LYS LYS C . n C 2 18 GLN 18 17 17 GLN GLN C . n C 2 19 THR 19 18 18 THR THR C . n C 2 20 LEU 20 19 19 LEU LEU C . n C 2 21 VAL 21 20 20 VAL VAL C . n C 2 22 LEU 22 21 21 LEU LEU C . n C 2 23 ASN 23 22 22 ASN ASN C . n C 2 24 PRO 24 23 23 PRO PRO C . n C 2 25 ARG 25 24 24 ARG ARG C . n C 2 26 GLY 26 25 25 GLY GLY C . n C 2 27 VAL 27 26 26 VAL VAL C . n C 2 28 ASN 28 27 27 ASN ASN C . n C 2 29 PRO 29 28 28 PRO PRO C . n C 2 30 THR 30 29 29 THR THR C . n C 2 31 ASN 31 30 30 ASN ASN C . n C 2 32 GLY 32 31 31 GLY GLY C . n C 2 33 VAL 33 32 32 VAL VAL C . n C 2 34 ALA 34 33 33 ALA ALA C . n C 2 35 SER 35 34 34 SER SER C . n C 2 36 LEU 36 35 35 LEU LEU C . n C 2 37 SER 37 36 36 SER SER C . n C 2 38 GLN 38 37 37 GLN GLN C . n C 2 39 ALA 39 38 38 ALA ALA C . n C 2 40 GLY 40 39 39 GLY GLY C . n C 2 41 ALA 41 40 40 ALA ALA C . n C 2 42 VAL 42 41 41 VAL VAL C . n C 2 43 PRO 43 42 42 PRO PRO C . n C 2 44 ALA 44 43 43 ALA ALA C . n C 2 45 LEU 45 44 44 LEU LEU C . n C 2 46 GLU 46 45 45 GLU GLU C . n C 2 47 LYS 47 46 46 LYS LYS C . n C 2 48 ARG 48 47 47 ARG ARG C . n C 2 49 VAL 49 48 48 VAL VAL C . n C 2 50 THR 50 49 49 THR THR C . n C 2 51 VAL 51 50 50 VAL VAL C . n C 2 52 SER 52 51 51 SER SER C . n C 2 53 VAL 53 52 52 VAL VAL C . n C 2 54 SER 54 53 53 SER SER C . n C 2 55 GLN 55 54 54 GLN GLN C . n C 2 56 PRO 56 55 55 PRO PRO C . n C 2 57 SER 57 56 ? ? ? C . n C 2 58 ARG 58 57 ? ? ? C . n C 2 59 ASN 59 58 ? ? ? C . n C 2 60 ARG 60 59 ? ? ? C . n C 2 61 LYS 61 60 60 LYS LYS C . n C 2 62 ASN 62 61 61 ASN ASN C . n C 2 63 TYR 63 62 62 TYR TYR C . n C 2 64 LYS 64 63 63 LYS LYS C . n C 2 65 VAL 65 64 64 VAL VAL C . n C 2 66 GLN 66 65 65 GLN GLN C . n C 2 67 VAL 67 66 66 VAL VAL C . n C 2 68 LYS 68 67 67 LYS LYS C . n C 2 69 ILE 69 68 68 ILE ILE C . n C 2 70 GLN 70 69 69 GLN GLN C . n C 2 71 ASN 71 70 70 ASN ASN C . n C 2 72 PRO 72 71 71 PRO PRO C . n C 2 73 THR 73 72 72 THR THR C . n C 2 74 ALA 74 73 73 ALA ALA C . n C 2 75 CYS 75 74 74 CYS CYS C . n C 2 76 THR 76 75 75 THR THR C . n C 2 77 ALA 77 76 76 ALA ALA C . n C 2 78 ASN 78 77 77 ASN ASN C . n C 2 79 GLY 79 78 78 GLY GLY C . n C 2 80 SER 80 79 79 SER SER C . n C 2 81 CYS 81 80 80 CYS CYS C . n C 2 82 ASP 82 81 81 ASP ASP C . n C 2 83 PRO 83 82 82 PRO PRO C . n C 2 84 SER 84 83 83 SER SER C . n C 2 85 VAL 85 84 84 VAL VAL C . n C 2 86 THR 86 85 85 THR THR C . n C 2 87 ARG 87 86 86 ARG ARG C . n C 2 88 GLN 88 87 87 GLN GLN C . n C 2 89 ALA 89 88 88 ALA ALA C . n C 2 90 TYR 90 89 89 TYR TYR C . n C 2 91 ALA 91 90 90 ALA ALA C . n C 2 92 ASP 92 91 91 ASP ASP C . n C 2 93 VAL 93 92 92 VAL VAL C . n C 2 94 THR 94 93 93 THR THR C . n C 2 95 PHE 95 94 94 PHE PHE C . n C 2 96 SER 96 95 95 SER SER C . n C 2 97 PHE 97 96 96 PHE PHE C . n C 2 98 THR 98 97 97 THR THR C . n C 2 99 GLN 99 98 98 GLN GLN C . n C 2 100 TYR 100 99 99 TYR TYR C . n C 2 101 SER 101 100 100 SER SER C . n C 2 102 THR 102 101 101 THR THR C . n C 2 103 ASP 103 102 102 ASP ASP C . n C 2 104 GLU 104 103 103 GLU GLU C . n C 2 105 GLU 105 104 104 GLU GLU C . n C 2 106 ARG 106 105 105 ARG ARG C . n C 2 107 ALA 107 106 106 ALA ALA C . n C 2 108 PHE 108 107 107 PHE PHE C . n C 2 109 VAL 109 108 108 VAL VAL C . n C 2 110 ARG 110 109 109 ARG ARG C . n C 2 111 THR 111 110 110 THR THR C . n C 2 112 GLU 112 111 111 GLU GLU C . n C 2 113 LEU 113 112 112 LEU LEU C . n C 2 114 ALA 114 113 113 ALA ALA C . n C 2 115 ALA 115 114 114 ALA ALA C . n C 2 116 LEU 116 115 115 LEU LEU C . n C 2 117 LEU 117 116 116 LEU LEU C . n C 2 118 ALA 118 117 117 ALA ALA C . n C 2 119 SER 119 118 118 SER SER C . n C 2 120 PRO 120 119 119 PRO PRO C . n C 2 121 LEU 121 120 120 LEU LEU C . n C 2 122 LEU 122 121 121 LEU LEU C . n C 2 123 ILE 123 122 122 ILE ILE C . n C 2 124 ASP 124 123 123 ASP ASP C . n C 2 125 ALA 125 124 124 ALA ALA C . n C 2 126 ILE 126 125 125 ILE ILE C . n C 2 127 ASP 127 126 126 ASP ASP C . n C 2 128 GLN 128 127 127 GLN GLN C . n C 2 129 LEU 129 128 128 LEU LEU C . n C 2 130 ASN 130 129 129 ASN ASN C . n C 2 131 PRO 131 130 130 PRO PRO C . n C 2 132 ALA 132 131 131 ALA ALA C . n C 2 133 TYR 133 132 ? ? ? C . n D 3 1 VAL 1 1 ? ? ? L . n D 3 2 HIS 2 2 ? ? ? L . n D 3 3 SER 3 3 ? ? ? L . n D 3 4 GLU 4 4 ? ? ? L . n D 3 5 THR 5 5 ? ? ? L . n D 3 6 THR 6 6 ? ? ? L . n D 3 7 VAL 7 7 7 VAL VAL L . n D 3 8 THR 8 8 8 THR THR L . n D 3 9 GLN 9 9 9 GLN GLN L . n D 3 10 SER 10 10 10 SER SER L . n D 3 11 PRO 11 11 11 PRO PRO L . n D 3 12 ALA 12 12 12 ALA ALA L . n D 3 13 SER 13 13 13 SER SER L . n D 3 14 LEU 14 14 14 LEU LEU L . n D 3 15 SEP 15 15 15 SEP SEP L . n D 3 16 VAL 16 16 16 VAL VAL L . n D 3 17 ALA 17 17 17 ALA ALA L . n D 3 18 THR 18 18 18 THR THR L . n D 3 19 GLY 19 19 19 GLY GLY L . n D 3 20 GLU 20 20 20 GLU GLU L . n D 3 21 LYS 21 21 21 LYS LYS L . n D 3 22 VAL 22 22 22 VAL VAL L . n D 3 23 THR 23 23 23 THR THR L . n D 3 24 ILE 24 24 24 ILE ILE L . n D 3 25 ARG 25 25 25 ARG ARG L . n D 3 26 CYS 26 26 26 CYS CYS L . n D 3 27 ILE 27 27 27 ILE ILE L . n D 3 28 THR 28 28 28 THR THR L . n D 3 29 SER 29 29 29 SER SER L . n D 3 30 THR 30 30 30 THR THR L . n D 3 31 ASP 31 31 31 ASP ASP L . n D 3 32 ILE 32 32 32 ILE ILE L . n D 3 33 ASP 33 33 33 ASP ASP L . n D 3 34 ASP 34 34 34 ASP ASP L . n D 3 35 ASP 35 35 35 ASP ASP L . n D 3 36 MET 36 36 36 MET MET L . n D 3 37 ASN 37 37 37 ASN ASN L . n D 3 38 TRP 38 38 38 TRP TRP L . n D 3 39 TYR 39 39 39 TYR TYR L . n D 3 40 GLN 40 40 40 GLN GLN L . n D 3 41 GLN 41 41 41 GLN GLN L . n D 3 42 LYS 42 42 42 LYS LYS L . n D 3 43 PRO 43 43 43 PRO PRO L . n D 3 44 GLY 44 44 44 GLY GLY L . n D 3 45 GLU 45 45 45 GLU GLU L . n D 3 46 PRO 46 46 46 PRO PRO L . n D 3 47 PRO 47 47 47 PRO PRO L . n D 3 48 LYS 48 48 48 LYS LYS L . n D 3 49 LEU 49 49 49 LEU LEU L . n D 3 50 LEU 50 50 50 LEU LEU L . n D 3 51 ILE 51 51 51 ILE ILE L . n D 3 52 SER 52 52 52 SER SER L . n D 3 53 GLU 53 53 53 GLU GLU L . n D 3 54 GLY 54 54 54 GLY GLY L . n D 3 55 ASN 55 55 55 ASN ASN L . n D 3 56 THR 56 56 56 THR THR L . n D 3 57 LEU 57 57 57 LEU LEU L . n D 3 58 ARG 58 58 58 ARG ARG L . n D 3 59 PRO 59 59 59 PRO PRO L . n D 3 60 GLY 60 60 60 GLY GLY L . n D 3 61 VAL 61 61 61 VAL VAL L . n D 3 62 PRO 62 62 62 PRO PRO L . n D 3 63 SER 63 63 63 SER SER L . n D 3 64 ARG 64 64 64 ARG ARG L . n D 3 65 PHE 65 65 65 PHE PHE L . n D 3 66 SER 66 66 66 SER SER L . n D 3 67 SER 67 67 67 SER SER L . n D 3 68 SER 68 68 68 SER SER L . n D 3 69 GLY 69 69 69 GLY GLY L . n D 3 70 TYR 70 70 70 TYR TYR L . n D 3 71 GLY 71 71 71 GLY GLY L . n D 3 72 THR 72 72 72 THR THR L . n D 3 73 ASP 73 73 73 ASP ASP L . n D 3 74 PHE 74 74 74 PHE PHE L . n D 3 75 VAL 75 75 75 VAL VAL L . n D 3 76 PHE 76 76 76 PHE PHE L . n D 3 77 THR 77 77 77 THR THR L . n D 3 78 ILE 78 78 78 ILE ILE L . n D 3 79 GLU 79 79 79 GLU GLU L . n D 3 80 ASN 80 80 80 ASN ASN L . n D 3 81 THR 81 81 81 THR THR L . n D 3 82 LEU 82 82 82 LEU LEU L . n D 3 83 SER 83 83 83 SER SER L . n D 3 84 GLU 84 84 84 GLU GLU L . n D 3 85 ASP 85 85 85 ASP ASP L . n D 3 86 VAL 86 86 86 VAL VAL L . n D 3 87 ALA 87 87 87 ALA ALA L . n D 3 88 ASP 88 88 88 ASP ASP L . n D 3 89 TYR 89 89 89 TYR TYR L . n D 3 90 TYR 90 90 90 TYR TYR L . n D 3 91 CYS 91 91 91 CYS CYS L . n D 3 92 LEU 92 92 92 LEU LEU L . n D 3 93 GLN 93 93 93 GLN GLN L . n D 3 94 SER 94 94 94 SER SER L . n D 3 95 ASP 95 95 95 ASP ASP L . n D 3 96 ASN 96 96 96 ASN ASN L . n D 3 97 MET 97 97 97 MET MET L . n D 3 98 PRO 98 98 98 PRO PRO L . n D 3 99 LEU 99 99 99 LEU LEU L . n D 3 100 THR 100 100 100 THR THR L . n D 3 101 PHE 101 101 ? ? ? L . n D 3 102 GLY 102 102 ? ? ? L . n D 3 103 ALA 103 103 ? ? ? L . n D 3 104 GLY 104 104 ? ? ? L . n D 3 105 THR 105 105 ? ? ? L . n D 3 106 LYS 106 106 ? ? ? L . n D 3 107 LEU 107 107 ? ? ? L . n D 3 108 GLU 108 108 ? ? ? L . n D 3 109 ILE 109 109 ? ? ? L . n D 3 110 LYS 110 110 ? ? ? L . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8W5E _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8W5E _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8W5E _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8W5E _struct.title 'Cryo-EM structure of Qb-Ab4' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8W5E _struct_keywords.text 'Qb, Antibody, cryo-EM, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8W5E 8W5E ? 1 ? 1 2 UNP A1_BPQBE Q8LTE1 ? 2 ;MAKLETVTLGNIGKDGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQPSRNRKNYKVQVKIQNPTACTANGS CDPSVTRQAYADVTFSFTQYSTDEERAFVRTELAALLASPLLIDAIDQLNPAY ; 1 3 PDB 8W5E 8W5E ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8W5E H 1 ? 124 ? 8W5E 1 ? 124 ? 1 124 2 2 8W5E c 1 ? 133 ? Q8LTE1 1 ? 133 ? 0 132 3 2 8W5E C 1 ? 133 ? Q8LTE1 1 ? 133 ? 0 132 4 3 8W5E L 1 ? 110 ? 8W5E 1 ? 110 ? 1 110 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR B 102 ? LEU B 117 ? THR c 101 LEU c 116 1 ? 16 HELX_P HELX_P2 AA2 LEU B 121 ? ASP B 127 ? LEU c 120 ASP c 126 1 ? 7 HELX_P HELX_P3 AA3 THR C 102 ? LEU C 117 ? THR C 101 LEU C 116 1 ? 16 HELX_P HELX_P4 AA4 LEU C 121 ? ASP C 127 ? LEU C 120 ASP C 126 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 99 SG ? ? H CYS 25 H CYS 99 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf2 disulf ? ? D CYS 26 SG ? ? ? 1_555 D CYS 91 SG ? ? L CYS 26 L CYS 91 1_555 ? ? ? ? ? ? ? 2.042 ? ? covale1 covale both ? A ILE 73 C ? ? ? 1_555 A SEP 74 N ? ? H ILE 73 H SEP 74 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A SEP 74 C ? ? ? 1_555 A ARG 75 N ? ? H SEP 74 H ARG 75 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? D LEU 14 C ? ? ? 1_555 D SEP 15 N ? ? L LEU 14 L SEP 15 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale4 covale both ? D SEP 15 C ? ? ? 1_555 D VAL 16 N ? ? L SEP 15 L VAL 16 1_555 ? ? ? ? ? ? ? 1.333 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 SEP A 74 ? . . . . SEP H 74 ? 1_555 . . . . . . . SER 1 SEP Phosphorylation 'Named protein modification' 2 SEP D 15 ? . . . . SEP L 15 ? 1_555 . . . . . . . SER 1 SEP Phosphorylation 'Named protein modification' 3 CYS A 25 ? CYS A 99 ? CYS H 25 ? 1_555 CYS H 99 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS D 26 ? CYS D 91 ? CYS L 26 ? 1_555 CYS L 91 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 3 ? AA3 ? 5 ? AA4 ? 5 ? AA5 ? 4 ? AA6 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 7 ? SER A 10 ? LEU H 7 SER H 10 AA1 2 LEU A 23 ? ALA A 27 ? LEU H 23 ALA H 27 AA1 3 ASN A 80 ? TYR A 83 ? ASN H 80 TYR H 83 AA1 4 THR A 72 ? ARG A 75 ? THR H 72 ARG H 75 AA2 1 MET A 37 ? TRP A 39 ? MET H 37 TRP H 39 AA2 2 CYS A 99 ? GLN A 102 ? CYS H 99 GLN H 102 AA2 3 PHE A 110 ? TYR A 112 ? PHE H 110 TYR H 112 AA3 1 ASN B 23 ? ASN B 28 ? ASN c 22 ASN c 27 AA3 2 VAL B 33 ? SER B 37 ? VAL c 32 SER c 36 AA3 3 ARG B 48 ? VAL B 53 ? ARG c 47 VAL c 52 AA3 4 VAL B 65 ? CYS B 75 ? VAL c 64 CYS c 74 AA3 5 SER B 84 ? PHE B 95 ? SER c 83 PHE c 94 AA4 1 ASN C 23 ? ASN C 28 ? ASN C 22 ASN C 27 AA4 2 VAL C 33 ? SER C 37 ? VAL C 32 SER C 36 AA4 3 ARG C 48 ? VAL C 53 ? ARG C 47 VAL C 52 AA4 4 VAL C 65 ? CYS C 75 ? VAL C 64 CYS C 74 AA4 5 SER C 84 ? PHE C 95 ? SER C 83 PHE C 94 AA5 1 THR D 8 ? GLN D 9 ? THR L 8 GLN L 9 AA5 2 ILE D 24 ? THR D 28 ? ILE L 24 THR L 28 AA5 3 ASP D 73 ? THR D 77 ? ASP L 73 THR L 77 AA5 4 SER D 66 ? TYR D 70 ? SER L 66 TYR L 70 AA6 1 LYS D 48 ? LEU D 49 ? LYS L 48 LEU L 49 AA6 2 MET D 36 ? GLN D 41 ? MET L 36 GLN L 41 AA6 3 ASP D 88 ? GLN D 93 ? ASP L 88 GLN L 93 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 10 ? N SER H 10 O SER A 24 ? O SER H 24 AA1 2 3 N LEU A 23 ? N LEU H 23 O TYR A 83 ? O TYR H 83 AA1 3 4 O LEU A 82 ? O LEU H 82 N ILE A 73 ? N ILE H 73 AA2 1 2 N ALA A 38 ? N ALA H 38 O ALA A 100 ? O ALA H 100 AA2 2 3 N ARG A 101 ? N ARG H 101 O TYR A 112 ? O TYR H 112 AA3 1 2 N ASN B 23 ? N ASN c 22 O SER B 37 ? O SER c 36 AA3 2 3 N LEU B 36 ? N LEU c 35 O VAL B 49 ? O VAL c 48 AA3 3 4 N THR B 50 ? N THR c 49 O LYS B 68 ? O LYS c 67 AA3 4 5 N VAL B 65 ? N VAL c 64 O PHE B 95 ? O PHE c 94 AA4 1 2 N ASN C 23 ? N ASN C 22 O SER C 37 ? O SER C 36 AA4 2 3 N LEU C 36 ? N LEU C 35 O VAL C 49 ? O VAL C 48 AA4 3 4 N THR C 50 ? N THR C 49 O LYS C 68 ? O LYS C 67 AA4 4 5 N VAL C 65 ? N VAL C 64 O PHE C 95 ? O PHE C 94 AA5 1 2 N GLN D 9 ? N GLN L 9 O ILE D 27 ? O ILE L 27 AA5 2 3 N ILE D 24 ? N ILE L 24 O PHE D 76 ? O PHE L 76 AA5 3 4 O VAL D 75 ? O VAL L 75 N SER D 68 ? N SER L 68 AA6 1 2 O LYS D 48 ? O LYS L 48 N GLN D 40 ? N GLN L 40 AA6 2 3 N GLN D 41 ? N GLN L 41 O ASP D 88 ? O ASP L 88 # _pdbx_entry_details.entry_id 8W5E _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE2 _pdbx_validate_close_contact.auth_asym_id_1 H _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 9 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 C _pdbx_validate_close_contact.auth_asym_id_2 H _pdbx_validate_close_contact.auth_comp_id_2 ARG _pdbx_validate_close_contact.auth_seq_id_2 115 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA L LEU 49 ? ? CB L LEU 49 ? ? CG L LEU 49 ? ? 130.12 115.30 14.82 2.30 N 2 1 CA L LEU 92 ? ? CB L LEU 92 ? ? CG L LEU 92 ? ? 129.36 115.30 14.06 2.30 N 3 1 CA L LEU 99 ? ? CB L LEU 99 ? ? CG L LEU 99 ? ? 129.54 115.30 14.24 2.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER H 28 ? ? -142.06 20.30 2 1 THR H 31 ? ? 71.39 -9.17 3 1 PHE H 32 ? ? 66.41 -10.54 4 1 ASP H 34 ? ? 70.57 -6.59 5 1 TYR H 59 ? ? -95.53 -63.85 6 1 GLU H 76 ? ? -93.03 52.25 7 1 LYS c 13 ? ? 67.97 -18.12 8 1 ASP c 14 ? ? -141.91 -13.07 9 1 LYS C 13 ? ? 67.93 -18.05 10 1 ASP C 14 ? ? -141.95 -13.05 11 1 SEP L 15 ? ? -144.10 -31.98 12 1 VAL L 16 ? ? 57.34 -76.95 13 1 MET L 36 ? ? -160.97 114.79 14 1 LEU L 50 ? ? -150.73 -148.95 15 1 ILE L 51 ? ? -54.34 16.12 16 1 SER L 52 ? ? -40.36 158.16 17 1 ASN L 55 ? ? -141.28 46.78 18 1 LEU L 57 ? ? 59.11 71.13 19 1 ILE L 78 ? ? -113.89 -78.66 20 1 GLU L 79 ? ? 178.13 158.32 21 1 THR L 81 ? ? 37.43 47.53 22 1 ASN L 96 ? ? 60.32 75.95 23 1 MET L 97 ? ? -31.21 -38.68 24 1 LEU L 99 ? ? 57.53 18.23 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 LEU _pdbx_validate_peptide_omega.auth_asym_id_1 L _pdbx_validate_peptide_omega.auth_seq_id_1 50 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ILE _pdbx_validate_peptide_omega.auth_asym_id_2 L _pdbx_validate_peptide_omega.auth_seq_id_2 51 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -149.45 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8W5E _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8W5E _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.8 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 123614 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Complex of Qb-Ab4' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2, 3' # _em_imaging.entry_id 8W5E _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 1500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8W5E _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8W5E _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 H VAL 1 ? A VAL 1 2 1 Y 1 H HIS 2 ? A HIS 2 3 1 Y 1 H SER 3 ? A SER 3 4 1 Y 1 H GLU 4 ? A GLU 4 5 1 Y 1 H GLU 85 ? A GLU 85 6 1 Y 1 H MET 86 ? A MET 86 7 1 Y 1 H SER 87 ? A SER 87 8 1 Y 1 H SER 88 ? A SER 88 9 1 Y 1 H LEU 89 ? A LEU 89 10 1 Y 1 H ARG 90 ? A ARG 90 11 1 Y 1 H SER 91 ? A SER 91 12 1 Y 1 H GLU 92 ? A GLU 92 13 1 Y 1 H ASP 93 ? A ASP 93 14 1 Y 1 H THR 94 ? A THR 94 15 1 Y 1 H ALA 95 ? A ALA 95 16 1 Y 1 H MET 96 ? A MET 96 17 1 Y 1 H TYR 97 ? A TYR 97 18 1 Y 1 H GLY 116 ? A GLY 116 19 1 Y 1 H THR 117 ? A THR 117 20 1 Y 1 H THR 118 ? A THR 118 21 1 Y 1 H LEU 119 ? A LEU 119 22 1 Y 1 H THR 120 ? A THR 120 23 1 Y 1 H VAL 121 ? A VAL 121 24 1 Y 1 H SER 122 ? A SER 122 25 1 Y 1 H SER 123 ? A SER 123 26 1 Y 1 H ALA 124 ? A ALA 124 27 1 Y 1 c MET 0 ? B MET 1 28 1 Y 1 c SER 56 ? B SER 57 29 1 Y 1 c ARG 57 ? B ARG 58 30 1 Y 1 c ASN 58 ? B ASN 59 31 1 Y 1 c ARG 59 ? B ARG 60 32 1 Y 1 c TYR 132 ? B TYR 133 33 1 Y 1 C MET 0 ? C MET 1 34 1 Y 1 C SER 56 ? C SER 57 35 1 Y 1 C ARG 57 ? C ARG 58 36 1 Y 1 C ASN 58 ? C ASN 59 37 1 Y 1 C ARG 59 ? C ARG 60 38 1 Y 1 C TYR 132 ? C TYR 133 39 1 Y 1 L VAL 1 ? D VAL 1 40 1 Y 1 L HIS 2 ? D HIS 2 41 1 Y 1 L SER 3 ? D SER 3 42 1 Y 1 L GLU 4 ? D GLU 4 43 1 Y 1 L THR 5 ? D THR 5 44 1 Y 1 L THR 6 ? D THR 6 45 1 Y 1 L PHE 101 ? D PHE 101 46 1 Y 1 L GLY 102 ? D GLY 102 47 1 Y 1 L ALA 103 ? D ALA 103 48 1 Y 1 L GLY 104 ? D GLY 104 49 1 Y 1 L THR 105 ? D THR 105 50 1 Y 1 L LYS 106 ? D LYS 106 51 1 Y 1 L LEU 107 ? D LEU 107 52 1 Y 1 L GLU 108 ? D GLU 108 53 1 Y 1 L ILE 109 ? D ILE 109 54 1 Y 1 L LYS 110 ? D LYS 110 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SEP N N N N 287 SEP CA C N S 288 SEP CB C N N 289 SEP OG O N N 290 SEP C C N N 291 SEP O O N N 292 SEP OXT O N N 293 SEP P P N N 294 SEP O1P O N N 295 SEP O2P O N N 296 SEP O3P O N N 297 SEP H H N N 298 SEP H2 H N N 299 SEP HA H N N 300 SEP HB2 H N N 301 SEP HB3 H N N 302 SEP HXT H N N 303 SEP HOP2 H N N 304 SEP HOP3 H N N 305 SER N N N N 306 SER CA C N S 307 SER C C N N 308 SER O O N N 309 SER CB C N N 310 SER OG O N N 311 SER OXT O N N 312 SER H H N N 313 SER H2 H N N 314 SER HA H N N 315 SER HB2 H N N 316 SER HB3 H N N 317 SER HG H N N 318 SER HXT H N N 319 THR N N N N 320 THR CA C N S 321 THR C C N N 322 THR O O N N 323 THR CB C N R 324 THR OG1 O N N 325 THR CG2 C N N 326 THR OXT O N N 327 THR H H N N 328 THR H2 H N N 329 THR HA H N N 330 THR HB H N N 331 THR HG1 H N N 332 THR HG21 H N N 333 THR HG22 H N N 334 THR HG23 H N N 335 THR HXT H N N 336 TRP N N N N 337 TRP CA C N S 338 TRP C C N N 339 TRP O O N N 340 TRP CB C N N 341 TRP CG C Y N 342 TRP CD1 C Y N 343 TRP CD2 C Y N 344 TRP NE1 N Y N 345 TRP CE2 C Y N 346 TRP CE3 C Y N 347 TRP CZ2 C Y N 348 TRP CZ3 C Y N 349 TRP CH2 C Y N 350 TRP OXT O N N 351 TRP H H N N 352 TRP H2 H N N 353 TRP HA H N N 354 TRP HB2 H N N 355 TRP HB3 H N N 356 TRP HD1 H N N 357 TRP HE1 H N N 358 TRP HE3 H N N 359 TRP HZ2 H N N 360 TRP HZ3 H N N 361 TRP HH2 H N N 362 TRP HXT H N N 363 TYR N N N N 364 TYR CA C N S 365 TYR C C N N 366 TYR O O N N 367 TYR CB C N N 368 TYR CG C Y N 369 TYR CD1 C Y N 370 TYR CD2 C Y N 371 TYR CE1 C Y N 372 TYR CE2 C Y N 373 TYR CZ C Y N 374 TYR OH O N N 375 TYR OXT O N N 376 TYR H H N N 377 TYR H2 H N N 378 TYR HA H N N 379 TYR HB2 H N N 380 TYR HB3 H N N 381 TYR HD1 H N N 382 TYR HD2 H N N 383 TYR HE1 H N N 384 TYR HE2 H N N 385 TYR HH H N N 386 TYR HXT H N N 387 VAL N N N N 388 VAL CA C N S 389 VAL C C N N 390 VAL O O N N 391 VAL CB C N N 392 VAL CG1 C N N 393 VAL CG2 C N N 394 VAL OXT O N N 395 VAL H H N N 396 VAL H2 H N N 397 VAL HA H N N 398 VAL HB H N N 399 VAL HG11 H N N 400 VAL HG12 H N N 401 VAL HG13 H N N 402 VAL HG21 H N N 403 VAL HG22 H N N 404 VAL HG23 H N N 405 VAL HXT H N N 406 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SEP N CA sing N N 275 SEP N H sing N N 276 SEP N H2 sing N N 277 SEP CA CB sing N N 278 SEP CA C sing N N 279 SEP CA HA sing N N 280 SEP CB OG sing N N 281 SEP CB HB2 sing N N 282 SEP CB HB3 sing N N 283 SEP OG P sing N N 284 SEP C O doub N N 285 SEP C OXT sing N N 286 SEP OXT HXT sing N N 287 SEP P O1P doub N N 288 SEP P O2P sing N N 289 SEP P O3P sing N N 290 SEP O2P HOP2 sing N N 291 SEP O3P HOP3 sing N N 292 SER N CA sing N N 293 SER N H sing N N 294 SER N H2 sing N N 295 SER CA C sing N N 296 SER CA CB sing N N 297 SER CA HA sing N N 298 SER C O doub N N 299 SER C OXT sing N N 300 SER CB OG sing N N 301 SER CB HB2 sing N N 302 SER CB HB3 sing N N 303 SER OG HG sing N N 304 SER OXT HXT sing N N 305 THR N CA sing N N 306 THR N H sing N N 307 THR N H2 sing N N 308 THR CA C sing N N 309 THR CA CB sing N N 310 THR CA HA sing N N 311 THR C O doub N N 312 THR C OXT sing N N 313 THR CB OG1 sing N N 314 THR CB CG2 sing N N 315 THR CB HB sing N N 316 THR OG1 HG1 sing N N 317 THR CG2 HG21 sing N N 318 THR CG2 HG22 sing N N 319 THR CG2 HG23 sing N N 320 THR OXT HXT sing N N 321 TRP N CA sing N N 322 TRP N H sing N N 323 TRP N H2 sing N N 324 TRP CA C sing N N 325 TRP CA CB sing N N 326 TRP CA HA sing N N 327 TRP C O doub N N 328 TRP C OXT sing N N 329 TRP CB CG sing N N 330 TRP CB HB2 sing N N 331 TRP CB HB3 sing N N 332 TRP CG CD1 doub Y N 333 TRP CG CD2 sing Y N 334 TRP CD1 NE1 sing Y N 335 TRP CD1 HD1 sing N N 336 TRP CD2 CE2 doub Y N 337 TRP CD2 CE3 sing Y N 338 TRP NE1 CE2 sing Y N 339 TRP NE1 HE1 sing N N 340 TRP CE2 CZ2 sing Y N 341 TRP CE3 CZ3 doub Y N 342 TRP CE3 HE3 sing N N 343 TRP CZ2 CH2 doub Y N 344 TRP CZ2 HZ2 sing N N 345 TRP CZ3 CH2 sing Y N 346 TRP CZ3 HZ3 sing N N 347 TRP CH2 HH2 sing N N 348 TRP OXT HXT sing N N 349 TYR N CA sing N N 350 TYR N H sing N N 351 TYR N H2 sing N N 352 TYR CA C sing N N 353 TYR CA CB sing N N 354 TYR CA HA sing N N 355 TYR C O doub N N 356 TYR C OXT sing N N 357 TYR CB CG sing N N 358 TYR CB HB2 sing N N 359 TYR CB HB3 sing N N 360 TYR CG CD1 doub Y N 361 TYR CG CD2 sing Y N 362 TYR CD1 CE1 sing Y N 363 TYR CD1 HD1 sing N N 364 TYR CD2 CE2 doub Y N 365 TYR CD2 HD2 sing N N 366 TYR CE1 CZ doub Y N 367 TYR CE1 HE1 sing N N 368 TYR CE2 CZ sing Y N 369 TYR CE2 HE2 sing N N 370 TYR CZ OH sing N N 371 TYR OH HH sing N N 372 TYR OXT HXT sing N N 373 VAL N CA sing N N 374 VAL N H sing N N 375 VAL N H2 sing N N 376 VAL CA C sing N N 377 VAL CA CB sing N N 378 VAL CA HA sing N N 379 VAL C O doub N N 380 VAL C OXT sing N N 381 VAL CB CG1 sing N N 382 VAL CB CG2 sing N N 383 VAL CB HB sing N N 384 VAL CG1 HG11 sing N N 385 VAL CG1 HG12 sing N N 386 VAL CG1 HG13 sing N N 387 VAL CG2 HG21 sing N N 388 VAL CG2 HG22 sing N N 389 VAL CG2 HG23 sing N N 390 VAL OXT HXT sing N N 391 # _em_admin.current_status REL _em_admin.deposition_date 2023-08-26 _em_admin.deposition_site PDBJ _em_admin.entry_id 8W5E _em_admin.last_update 2025-02-26 _em_admin.map_release_date 2025-02-26 _em_admin.title 'Cryo-EM structure of Qb-Ab4' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 10088 _em_entity_assembly_naturalsource.organism Mus _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'MODEL REFINEMENT' ? 2 ? ? ? PHENIX 1.13_2998: 'IMAGE ACQUISITION' ? 3 ? ? 1 ? ? MASKING ? 4 ? ? ? ? ? 'CTF CORRECTION' ? 5 1 ? ? ? ? 'LAYERLINE INDEXING' ? 6 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 7 ? ? ? ? ? 'MODEL FITTING' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Natural Science Foundation of China (NSFC)' China 81991495 1 'National Natural Science Foundation of China (NSFC)' China 32241029 2 'Chinese Academy of Sciences' China XDB29050600 3 'Chinese Academy of Sciences' China XDB37010100 4 # _atom_sites.entry_id 8W5E _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_