HEADER ANTIVIRAL PROTEIN 12-SEP-23 8WCG TITLE CRYSTAL STRUCTURE OF SARS-COV-1 RBD IN COMPLEX WITH NANOBODY ASR29 AND TITLE 2 ASR347 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ASR29 NANOBODY; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ASR347 NANOBODY; COMPND 11 CHAIN: b, E; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS; SOURCE 3 ORGANISM_TAXID: 2901879; SOURCE 4 GENE: S, 2; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: 293F; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 10 ORGANISM_TAXID: 30538; SOURCE 11 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM_CELL_LINE: 293F; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 16 ORGANISM_TAXID: 30538; SOURCE 17 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 19 EXPRESSION_SYSTEM_CELL_LINE: 293F KEYWDS ALPACA, ANTIVIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR W.H.ZENG,H.MA,T.C.JIN REVDAT 1 18-SEP-24 8WCG 0 JRNL AUTH W.H.ZENG,H.MA,T.C.JIN JRNL TITL CRYSTAL STRUCTURE OF SARS-COV-1 RBD IN COMPLEX WITH NANOBODY JRNL TITL 2 ASR29 AND ASR347 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2481: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 83452 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4176 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 6.4043 - 5.5961 1.00 2671 137 0.2046 0.2531 REMARK 3 2 5.5961 - 5.0851 1.00 2646 160 0.1903 0.2658 REMARK 3 3 5.0851 - 4.7210 1.00 2665 146 0.1644 0.1685 REMARK 3 4 4.7210 - 4.4428 1.00 2646 155 0.1582 0.2260 REMARK 3 5 4.4428 - 4.2205 1.00 2620 180 0.1824 0.2138 REMARK 3 6 4.2205 - 4.0368 1.00 2680 106 0.2013 0.2545 REMARK 3 7 4.0368 - 3.8815 0.78 2085 112 0.2173 0.2854 REMARK 3 8 3.8815 - 3.7476 0.99 2652 156 0.2239 0.2682 REMARK 3 9 3.7476 - 3.6305 1.00 2641 144 0.2509 0.2804 REMARK 3 10 3.6305 - 3.5267 1.00 2683 130 0.2630 0.3506 REMARK 3 11 3.5267 - 3.4339 1.00 2626 203 0.2763 0.2818 REMARK 3 12 3.4339 - 3.3502 0.99 2625 137 0.2660 0.3217 REMARK 3 13 3.3502 - 3.2740 0.99 2647 160 0.2658 0.2807 REMARK 3 14 3.2740 - 3.2044 1.00 2654 130 0.2783 0.3723 REMARK 3 15 3.1403 - 3.0810 0.99 2629 149 0.2829 0.4043 REMARK 3 16 3.0810 - 3.0260 1.00 2687 148 0.3098 0.3912 REMARK 3 17 3.0260 - 2.9747 1.00 2679 142 0.2983 0.3993 REMARK 3 18 2.9747 - 2.9267 1.00 2649 144 0.3009 0.3617 REMARK 3 19 2.9267 - 2.8817 0.99 2712 94 0.3032 0.3760 REMARK 3 20 2.8817 - 2.8393 0.99 2639 138 0.3111 0.3870 REMARK 3 21 2.8393 - 2.7994 1.00 2671 119 0.2975 0.3275 REMARK 3 22 2.7994 - 2.7615 0.99 2683 115 0.3056 0.3793 REMARK 3 23 2.7615 - 2.7257 1.00 2672 136 0.3086 0.3102 REMARK 3 24 2.7257 - 2.6916 1.00 2719 122 0.2991 0.3023 REMARK 3 25 2.6916 - 2.6592 0.99 2653 116 0.3062 0.4007 REMARK 3 26 2.6592 - 2.6283 1.00 2642 149 0.3218 0.3896 REMARK 3 27 2.6283 - 2.5990 0.99 2700 150 0.3345 0.3700 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.57 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : 0.634 9826 REMARK 3 CHIRALITY : 0.076 1051 REMARK 3 PLANARITY : 0.004 1281 REMARK 3 DIHEDRAL : 8.089 4183 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8WCG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1300040942. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-AUG-22 REMARK 200 TEMPERATURE (KELVIN) : 103.15 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL10U2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979021 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 83452 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.599 REMARK 200 RESOLUTION RANGE LOW (A) : 95.930 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.12100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.97 REMARK 200 R MERGE FOR SHELL (I) : 1.19100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% W/V PEG4000, 0.1 M TRIS 8.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.42600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.34400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 67.33950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 68.34400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.42600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 67.33950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D, b, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 515 REMARK 465 SER A 516 REMARK 465 SER C 127 REMARK 465 THR B 320 REMARK 465 LEU B 515 REMARK 465 SER B 516 REMARK 465 SER D 127 REMARK 465 SER E 130 REMARK 465 SER E 131 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 373 CD CE NZ REMARK 470 LYS A 465 CG CD CE NZ REMARK 470 LEU A 504 CG CD1 CD2 REMARK 470 GLN C 13 CG CD OE1 NE2 REMARK 470 GLN C 39 CG CD OE1 NE2 REMARK 470 LYS C 43 CG CD CE NZ REMARK 470 LYS C 76 CG CD CE NZ REMARK 470 LYS B 373 CD CE NZ REMARK 470 LYS B 465 CG CD CE NZ REMARK 470 LEU B 504 CG CD1 CD2 REMARK 470 GLN D 13 CG CD OE1 NE2 REMARK 470 GLN D 39 CG CD OE1 NE2 REMARK 470 LYS D 43 CG CD CE NZ REMARK 470 LYS D 76 CG CD CE NZ REMARK 470 GLU E 26 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 330 O1 NAG B 600 1.34 REMARK 500 CG ASN B 330 O1 NAG B 600 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 409 -68.95 -133.97 REMARK 500 ASP A 429 -7.72 66.63 REMARK 500 VAL C 48 -61.78 -124.86 REMARK 500 SER C 105 45.43 -90.89 REMARK 500 PHE C 109 -134.15 53.16 REMARK 500 SER C 110 70.89 28.93 REMARK 500 PHE B 329 -81.29 -71.71 REMARK 500 ALA B 331 -124.66 -102.89 REMARK 500 THR B 332 -73.72 -139.38 REMARK 500 ALA B 339 50.10 -111.72 REMARK 500 ASN B 409 -59.84 -129.53 REMARK 500 ASN B 457 58.68 -143.26 REMARK 500 VAL D 48 -67.56 -123.44 REMARK 500 SER D 110 -155.53 60.21 REMARK 500 GLU D 111 -142.65 59.08 REMARK 500 ASP b 10 -177.61 -170.01 REMARK 500 GLU b 26 -112.01 61.00 REMARK 500 MET b 102 -45.64 75.73 REMARK 500 HIS b 119 -46.94 73.02 REMARK 500 GLU E 26 -111.98 58.60 REMARK 500 ILE E 85 60.76 35.02 REMARK 500 CYS E 111 -129.92 38.13 REMARK 500 SER E 112 -60.39 -146.01 REMARK 500 TYR E 118 97.84 59.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH E 214 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH E 215 DISTANCE = 8.21 ANGSTROMS DBREF 8WCG A 320 516 UNP P59594 SPIKE_SARS 320 516 DBREF 8WCG C 1 127 PDB 8WCG 8WCG 1 127 DBREF 8WCG B 320 516 UNP P59594 SPIKE_SARS 320 516 DBREF 8WCG D 1 127 PDB 8WCG 8WCG 1 127 DBREF 8WCG b 1 131 PDB 8WCG 8WCG 1 131 DBREF 8WCG E 1 131 PDB 8WCG 8WCG 1 131 SEQADV 8WCG HIS A 436 UNP P59594 TYR 436 CONFLICT SEQADV 8WCG HIS B 436 UNP P59594 TYR 436 CONFLICT SEQRES 1 A 197 THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA THR SEQRES 2 A 197 LYS PHE PRO SER VAL TYR ALA TRP GLU ARG LYS LYS ILE SEQRES 3 A 197 SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SER SEQRES 4 A 197 THR PHE PHE SER THR PHE LYS CYS TYR GLY VAL SER ALA SEQRES 5 A 197 THR LYS LEU ASN ASP LEU CYS PHE SER ASN VAL TYR ALA SEQRES 6 A 197 ASP SER PHE VAL VAL LYS GLY ASP ASP VAL ARG GLN ILE SEQRES 7 A 197 ALA PRO GLY GLN THR GLY VAL ILE ALA ASP TYR ASN TYR SEQRES 8 A 197 LYS LEU PRO ASP ASP PHE MET GLY CYS VAL LEU ALA TRP SEQRES 9 A 197 ASN THR ARG ASN ILE ASP ALA THR SER THR GLY ASN HIS SEQRES 10 A 197 ASN TYR LYS TYR ARG TYR LEU ARG HIS GLY LYS LEU ARG SEQRES 11 A 197 PRO PHE GLU ARG ASP ILE SER ASN VAL PRO PHE SER PRO SEQRES 12 A 197 ASP GLY LYS PRO CYS THR PRO PRO ALA LEU ASN CYS TYR SEQRES 13 A 197 TRP PRO LEU ASN ASP TYR GLY PHE TYR THR THR THR GLY SEQRES 14 A 197 ILE GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER PHE SEQRES 15 A 197 GLU LEU LEU ASN ALA PRO ALA THR VAL CYS GLY PRO LYS SEQRES 16 A 197 LEU SER SEQRES 1 C 127 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 127 ALA GLY GLY SER LEU ARG LEU SER CYS THR ALA PRO GLY SEQRES 3 C 127 ARG THR LEU LYS ASN PHE ALA LEU GLY TRP PHE ARG GLN SEQRES 4 C 127 ILE PRO GLY LYS GLU ARG GLU PHE VAL ALA ALA ILE THR SEQRES 5 C 127 PHE ASN ALA ASP SER SER TYR TYR SER ASP THR VAL LYS SEQRES 6 C 127 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 C 127 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 C 127 ALA VAL TYR TYR CYS VAL ALA GLY GLY ASN HIS TYR ASP SEQRES 9 C 127 SER ALA ARG TYR PHE SER GLU ARG GLU TRP ASP TYR LEU SEQRES 10 C 127 GLY ARG GLY THR GLN VAL THR VAL SER SER SEQRES 1 B 197 THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA THR SEQRES 2 B 197 LYS PHE PRO SER VAL TYR ALA TRP GLU ARG LYS LYS ILE SEQRES 3 B 197 SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SER SEQRES 4 B 197 THR PHE PHE SER THR PHE LYS CYS TYR GLY VAL SER ALA SEQRES 5 B 197 THR LYS LEU ASN ASP LEU CYS PHE SER ASN VAL TYR ALA SEQRES 6 B 197 ASP SER PHE VAL VAL LYS GLY ASP ASP VAL ARG GLN ILE SEQRES 7 B 197 ALA PRO GLY GLN THR GLY VAL ILE ALA ASP TYR ASN TYR SEQRES 8 B 197 LYS LEU PRO ASP ASP PHE MET GLY CYS VAL LEU ALA TRP SEQRES 9 B 197 ASN THR ARG ASN ILE ASP ALA THR SER THR GLY ASN HIS SEQRES 10 B 197 ASN TYR LYS TYR ARG TYR LEU ARG HIS GLY LYS LEU ARG SEQRES 11 B 197 PRO PHE GLU ARG ASP ILE SER ASN VAL PRO PHE SER PRO SEQRES 12 B 197 ASP GLY LYS PRO CYS THR PRO PRO ALA LEU ASN CYS TYR SEQRES 13 B 197 TRP PRO LEU ASN ASP TYR GLY PHE TYR THR THR THR GLY SEQRES 14 B 197 ILE GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER PHE SEQRES 15 B 197 GLU LEU LEU ASN ALA PRO ALA THR VAL CYS GLY PRO LYS SEQRES 16 B 197 LEU SER SEQRES 1 D 127 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 D 127 ALA GLY GLY SER LEU ARG LEU SER CYS THR ALA PRO GLY SEQRES 3 D 127 ARG THR LEU LYS ASN PHE ALA LEU GLY TRP PHE ARG GLN SEQRES 4 D 127 ILE PRO GLY LYS GLU ARG GLU PHE VAL ALA ALA ILE THR SEQRES 5 D 127 PHE ASN ALA ASP SER SER TYR TYR SER ASP THR VAL LYS SEQRES 6 D 127 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 D 127 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 D 127 ALA VAL TYR TYR CYS VAL ALA GLY GLY ASN HIS TYR ASP SEQRES 9 D 127 SER ALA ARG TYR PHE SER GLU ARG GLU TRP ASP TYR LEU SEQRES 10 D 127 GLY ARG GLY THR GLN VAL THR VAL SER SER SEQRES 1 b 131 GLN VAL GLN LEU VAL GLU SER GLY GLY ASP LEU VAL GLN SEQRES 2 b 131 PRO GLY GLY SER LEU LYS LEU SER CYS VAL ALA SER GLU SEQRES 3 b 131 GLY PHE LEU ALA TYR TYR TYR VAL GLY TRP PHE ARG GLN SEQRES 4 b 131 ALA PRO GLY LYS GLU ARG GLU GLY VAL ALA CYS THR SER SEQRES 5 b 131 SER SER GLY TYR SER THR ASP ILE ALA ASP PRO ALA LYS SEQRES 6 b 131 GLY ARG PHE SER ILE ASP ARG ASP ASN ALA LYS ASN THR SEQRES 7 b 131 VAL TYR LEU GLN MET ASN ILE LEU LYS PRO GLU ASP THR SEQRES 8 b 131 ALA VAL TYR PHE CYS ALA ALA ILE ASP GLN MET THR ALA SEQRES 9 b 131 VAL ARG SER GLN GLY PRO CYS SER MET THR PRO ASN ASP SEQRES 10 b 131 TYR HIS ASP TRP GLY GLN GLY THR GLN VAL THR VAL SER SEQRES 11 b 131 SER SEQRES 1 E 131 GLN VAL GLN LEU VAL GLU SER GLY GLY ASP LEU VAL GLN SEQRES 2 E 131 PRO GLY GLY SER LEU LYS LEU SER CYS VAL ALA SER GLU SEQRES 3 E 131 GLY PHE LEU ALA TYR TYR TYR VAL GLY TRP PHE ARG GLN SEQRES 4 E 131 ALA PRO GLY LYS GLU ARG GLU GLY VAL ALA CYS THR SER SEQRES 5 E 131 SER SER GLY TYR SER THR ASP ILE ALA ASP PRO ALA LYS SEQRES 6 E 131 GLY ARG PHE SER ILE ASP ARG ASP ASN ALA LYS ASN THR SEQRES 7 E 131 VAL TYR LEU GLN MET ASN ILE LEU LYS PRO GLU ASP THR SEQRES 8 E 131 ALA VAL TYR PHE CYS ALA ALA ILE ASP GLN MET THR ALA SEQRES 9 E 131 VAL ARG SER GLN GLY PRO CYS SER MET THR PRO ASN ASP SEQRES 10 E 131 TYR HIS ASP TRP GLY GLN GLY THR GLN VAL THR VAL SER SEQRES 11 E 131 SER HET NAG A 601 15 HET NAG B 600 15 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 7 NAG 2(C8 H15 N O6) FORMUL 9 HOH *98(H2 O) HELIX 1 AA1 PRO A 324 ASN A 330 1 7 HELIX 2 AA2 TYR A 352 ASN A 357 1 6 HELIX 3 AA3 SER A 370 LEU A 377 5 8 HELIX 4 AA4 ASP A 392 ILE A 397 5 6 HELIX 5 AA5 GLY A 403 ASN A 409 1 7 HELIX 6 AA6 LYS C 87 THR C 91 5 5 HELIX 7 AA7 SER C 110 TRP C 114 5 5 HELIX 8 AA8 ASP B 351 TYR B 356 5 6 HELIX 9 AA9 LYS B 373 ASP B 376 5 4 HELIX 10 AB1 ASP B 392 ILE B 397 5 6 HELIX 11 AB2 GLY B 403 ASN B 409 1 7 HELIX 12 AB3 THR B 425 ALA B 430 1 6 HELIX 13 AB4 GLY B 488 TYR B 491 5 4 HELIX 14 AB5 LYS D 87 THR D 91 5 5 HELIX 15 AB6 SER D 110 TRP D 114 5 5 HELIX 16 AB7 PHE b 28 ALA b 30 5 3 HELIX 17 AB8 ASP b 62 LYS b 65 5 4 HELIX 18 AB9 LYS b 87 THR b 91 5 5 HELIX 19 AC1 THR b 114 HIS b 119 1 6 HELIX 20 AC2 PHE E 28 ALA E 30 5 3 HELIX 21 AC3 ASP E 62 LYS E 65 5 4 HELIX 22 AC4 ASN E 74 LYS E 76 5 3 HELIX 23 AC5 LYS E 87 THR E 91 5 5 HELIX 24 AC6 GLN E 101 VAL E 105 1 5 SHEET 1 AA1 6 GLU A 341 ILE A 345 0 SHEET 2 AA1 6 ASN A 381 LYS A 390 -1 O VAL A 382 N ILE A 345 SHEET 3 AA1 6 PRO A 493 GLU A 502 -1 O SER A 500 N TYR A 383 SHEET 4 AA1 6 GLY A 418 ASN A 424 -1 N LEU A 421 O VAL A 497 SHEET 5 AA1 6 PHE A 361 TYR A 367 -1 N TYR A 367 O GLY A 418 SHEET 6 AA1 6 ASN C 101 HIS C 102 -1 O ASN C 101 N CYS A 366 SHEET 1 AA2 2 CYS A 348 VAL A 349 0 SHEET 2 AA2 2 VAL A 510 CYS A 511 1 O CYS A 511 N CYS A 348 SHEET 1 AA3 2 LYS A 439 ARG A 441 0 SHEET 2 AA3 2 LEU A 478 ASP A 480 -1 O ASN A 479 N TYR A 440 SHEET 1 AA4 4 VAL C 5 SER C 7 0 SHEET 2 AA4 4 LEU C 18 THR C 23 -1 O SER C 21 N SER C 7 SHEET 3 AA4 4 THR C 78 MET C 83 -1 O MET C 83 N LEU C 18 SHEET 4 AA4 4 PHE C 68 ASP C 73 -1 N SER C 71 O TYR C 80 SHEET 1 AA5 6 GLY C 10 GLN C 13 0 SHEET 2 AA5 6 THR C 121 SER C 126 1 O THR C 124 N GLY C 10 SHEET 3 AA5 6 ALA C 92 GLY C 99 -1 N TYR C 94 O THR C 121 SHEET 4 AA5 6 ALA C 33 GLN C 39 -1 N ALA C 33 O GLY C 99 SHEET 5 AA5 6 ARG C 45 ILE C 51 -1 O GLU C 46 N ARG C 38 SHEET 6 AA5 6 SER C 58 TYR C 60 -1 O TYR C 59 N ALA C 50 SHEET 1 AA6 4 GLY C 10 GLN C 13 0 SHEET 2 AA6 4 THR C 121 SER C 126 1 O THR C 124 N GLY C 10 SHEET 3 AA6 4 ALA C 92 GLY C 99 -1 N TYR C 94 O THR C 121 SHEET 4 AA6 4 TYR C 116 LEU C 117 -1 O TYR C 116 N ALA C 98 SHEET 1 AA7 6 GLU B 341 ILE B 345 0 SHEET 2 AA7 6 ASN B 381 LYS B 390 -1 O VAL B 382 N ILE B 345 SHEET 3 AA7 6 PRO B 493 GLU B 502 -1 O GLU B 502 N ASN B 381 SHEET 4 AA7 6 GLY B 418 ASN B 424 -1 N LEU B 421 O VAL B 497 SHEET 5 AA7 6 THR B 363 TYR B 367 -1 N TYR B 367 O GLY B 418 SHEET 6 AA7 6 ASN D 101 HIS D 102 -1 O ASN D 101 N CYS B 366 SHEET 1 AA8 3 CYS B 348 VAL B 349 0 SHEET 2 AA8 3 VAL B 510 CYS B 511 1 O CYS B 511 N CYS B 348 SHEET 3 AA8 3 CYS B 378 PHE B 379 -1 N PHE B 379 O VAL B 510 SHEET 1 AA9 2 LYS B 439 ARG B 441 0 SHEET 2 AA9 2 LEU B 478 ASP B 480 -1 O ASN B 479 N TYR B 440 SHEET 1 AB1 4 VAL D 5 SER D 7 0 SHEET 2 AB1 4 SER D 17 THR D 23 -1 O SER D 21 N SER D 7 SHEET 3 AB1 4 THR D 78 ASN D 84 -1 O MET D 83 N LEU D 18 SHEET 4 AB1 4 PHE D 68 ASP D 73 -1 N SER D 71 O TYR D 80 SHEET 1 AB2 6 GLY D 10 GLN D 13 0 SHEET 2 AB2 6 THR D 121 SER D 126 1 O THR D 124 N VAL D 12 SHEET 3 AB2 6 ALA D 92 GLY D 99 -1 N TYR D 94 O THR D 121 SHEET 4 AB2 6 ALA D 33 GLN D 39 -1 N PHE D 37 O TYR D 95 SHEET 5 AB2 6 GLU D 46 ILE D 51 -1 O GLU D 46 N ARG D 38 SHEET 6 AB2 6 SER D 58 TYR D 60 -1 O TYR D 59 N ALA D 50 SHEET 1 AB3 4 GLY D 10 GLN D 13 0 SHEET 2 AB3 4 THR D 121 SER D 126 1 O THR D 124 N VAL D 12 SHEET 3 AB3 4 ALA D 92 GLY D 99 -1 N TYR D 94 O THR D 121 SHEET 4 AB3 4 TYR D 116 LEU D 117 -1 O TYR D 116 N ALA D 98 SHEET 1 AB4 4 GLN b 3 SER b 7 0 SHEET 2 AB4 4 LEU b 18 SER b 25 -1 O SER b 21 N SER b 7 SHEET 3 AB4 4 THR b 78 MET b 83 -1 O MET b 83 N LEU b 18 SHEET 4 AB4 4 SER b 69 ASP b 73 -1 N ASP b 71 O TYR b 80 SHEET 1 AB5 6 LEU b 11 VAL b 12 0 SHEET 2 AB5 6 THR b 125 VAL b 129 1 O THR b 128 N VAL b 12 SHEET 3 AB5 6 ALA b 92 ASP b 100 -1 N TYR b 94 O THR b 125 SHEET 4 AB5 6 TYR b 32 GLN b 39 -1 N PHE b 37 O PHE b 95 SHEET 5 AB5 6 GLU b 46 THR b 51 -1 O VAL b 48 N TRP b 36 SHEET 6 AB5 6 THR b 58 ILE b 60 -1 O ASP b 59 N CYS b 50 SHEET 1 AB6 4 LEU b 11 VAL b 12 0 SHEET 2 AB6 4 THR b 125 VAL b 129 1 O THR b 128 N VAL b 12 SHEET 3 AB6 4 ALA b 92 ASP b 100 -1 N TYR b 94 O THR b 125 SHEET 4 AB6 4 ASP b 120 TRP b 121 -1 O ASP b 120 N ALA b 98 SHEET 1 AB7 4 VAL E 2 SER E 7 0 SHEET 2 AB7 4 LEU E 18 GLU E 26 -1 O SER E 21 N SER E 7 SHEET 3 AB7 4 THR E 78 MET E 83 -1 O LEU E 81 N LEU E 20 SHEET 4 AB7 4 PHE E 68 ASP E 73 -1 N ASP E 71 O TYR E 80 SHEET 1 AB8 5 THR E 58 ILE E 60 0 SHEET 2 AB8 5 LYS E 43 THR E 51 -1 N CYS E 50 O ASP E 59 SHEET 3 AB8 5 TYR E 32 ALA E 40 -1 N TRP E 36 O ALA E 49 SHEET 4 AB8 5 ALA E 92 ASP E 100 -1 O PHE E 95 N PHE E 37 SHEET 5 AB8 5 ASP E 120 TRP E 121 -1 O ASP E 120 N ALA E 98 SHEET 1 AB9 5 THR E 58 ILE E 60 0 SHEET 2 AB9 5 LYS E 43 THR E 51 -1 N CYS E 50 O ASP E 59 SHEET 3 AB9 5 TYR E 32 ALA E 40 -1 N TRP E 36 O ALA E 49 SHEET 4 AB9 5 ALA E 92 ASP E 100 -1 O PHE E 95 N PHE E 37 SHEET 5 AB9 5 THR E 125 VAL E 127 -1 O THR E 125 N TYR E 94 SSBOND 1 CYS A 323 CYS A 348 1555 1555 2.03 SSBOND 2 CYS A 366 CYS A 419 1555 1555 2.04 SSBOND 3 CYS A 378 CYS A 511 1555 1555 2.03 SSBOND 4 CYS A 467 CYS A 474 1555 1555 2.04 SSBOND 5 CYS C 22 CYS C 96 1555 1555 2.03 SSBOND 6 CYS B 323 CYS B 348 1555 1555 2.04 SSBOND 7 CYS B 366 CYS B 419 1555 1555 2.04 SSBOND 8 CYS B 378 CYS B 511 1555 1555 2.04 SSBOND 9 CYS B 467 CYS B 474 1555 1555 2.04 SSBOND 10 CYS D 22 CYS D 96 1555 1555 2.03 SSBOND 11 CYS b 22 CYS b 96 1555 1555 2.04 SSBOND 12 CYS b 50 CYS b 111 1555 1555 2.03 SSBOND 13 CYS E 22 CYS E 96 1555 1555 2.03 SSBOND 14 CYS E 50 CYS E 111 1555 1555 1.99 LINK ND2 ASN B 330 C1 NAG B 600 1555 1555 1.45 CRYST1 76.852 134.679 136.688 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013012 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007425 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007316 0.00000