HEADER ONCOPROTEIN 14-SEP-23 8WD4 TITLE EGFR(L858R/T790/C797S) IN COMPLEX WITH COMPOUND 5J COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS EGFR, C797S, DRUG DISCOVERY, ONCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.NISHIKAWA REVDAT 2 03-JAN-24 8WD4 1 JRNL REVDAT 1 20-DEC-23 8WD4 0 JRNL AUTH H.KAGEJI,T.MOMOSE,Y.NAGAMOTO,N.TOGASHI,I.YASUMATSU, JRNL AUTH 2 Y.NISHIKAWA,K.KIHARA,K.HIRAMOTO,M.MINAMI,N.KASANUKI, JRNL AUTH 3 T.ISOYAMA,H.NAITO JRNL TITL SYNTHESIS, ACTIVITY, AND THEIR RELATIONSHIPS OF JRNL TITL 2 2,4-DIAMINONICOTINAMIDE DERIVATIVES AS EGFR INHIBITORS JRNL TITL 3 TARGETING C797S MUTATION. JRNL REF BIOORG.MED.CHEM.LETT. V. 98 29575 2023 JRNL REFN ESSN 1464-3405 JRNL PMID 38065292 JRNL DOI 10.1016/J.BMCL.2023.129575 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 16227 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.710 REMARK 3 FREE R VALUE TEST SET COUNT : 926 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9600 - 4.8800 0.94 2212 131 0.1802 0.2002 REMARK 3 2 4.8800 - 3.8700 0.96 2140 172 0.1560 0.1839 REMARK 3 3 3.8700 - 3.3800 0.96 2181 101 0.1830 0.2047 REMARK 3 4 3.3800 - 3.0700 0.97 2203 120 0.2331 0.2990 REMARK 3 5 3.0700 - 2.8500 0.98 2158 143 0.2450 0.3163 REMARK 3 6 2.8500 - 2.6900 0.97 2166 146 0.3453 0.4117 REMARK 3 7 2.6800 - 2.5500 0.98 2241 113 0.3063 0.3473 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.026 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 63.01 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2486 REMARK 3 ANGLE : 1.522 3363 REMARK 3 CHIRALITY : 0.090 376 REMARK 3 PLANARITY : 0.007 419 REMARK 3 DIHEDRAL : 13.881 947 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 694 THROUGH 731 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.3371 -31.2129 6.9212 REMARK 3 T TENSOR REMARK 3 T11: 0.5899 T22: 0.6658 REMARK 3 T33: 0.7077 T12: -0.0149 REMARK 3 T13: 0.0792 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 0.6613 L22: 1.3532 REMARK 3 L33: 0.2413 L12: 0.1652 REMARK 3 L13: -0.3326 L23: 0.3088 REMARK 3 S TENSOR REMARK 3 S11: 0.0653 S12: 0.2490 S13: -0.0764 REMARK 3 S21: 0.1348 S22: -0.1270 S23: 0.4896 REMARK 3 S31: 0.0828 S32: -0.2036 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 732 THROUGH 791 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.7203 -31.7502 5.4452 REMARK 3 T TENSOR REMARK 3 T11: 0.5427 T22: 0.5797 REMARK 3 T33: 0.6064 T12: -0.0702 REMARK 3 T13: 0.0983 T23: 0.0388 REMARK 3 L TENSOR REMARK 3 L11: 0.5789 L22: 1.9547 REMARK 3 L33: 0.2772 L12: -0.3803 REMARK 3 L13: -0.2256 L23: -0.0927 REMARK 3 S TENSOR REMARK 3 S11: -0.1034 S12: -0.2232 S13: -0.2978 REMARK 3 S21: -0.1622 S22: 0.0420 S23: 0.5780 REMARK 3 S31: 0.1078 S32: 0.0488 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 792 THROUGH 960 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.9314 -23.2744 -16.8120 REMARK 3 T TENSOR REMARK 3 T11: 0.4367 T22: 0.4578 REMARK 3 T33: 0.4585 T12: -0.0834 REMARK 3 T13: 0.0042 T23: 0.0657 REMARK 3 L TENSOR REMARK 3 L11: 2.0044 L22: 1.9458 REMARK 3 L33: 3.9297 L12: 0.5236 REMARK 3 L13: -0.8299 L23: -1.4174 REMARK 3 S TENSOR REMARK 3 S11: -0.2022 S12: 0.1896 S13: 0.0730 REMARK 3 S21: -0.1181 S22: 0.3901 S23: 0.3203 REMARK 3 S31: 0.4101 S32: -0.5979 S33: 0.0116 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 961 THROUGH 1019 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.0335 -14.7009 -5.3103 REMARK 3 T TENSOR REMARK 3 T11: 0.6305 T22: 0.5086 REMARK 3 T33: 0.5870 T12: 0.0713 REMARK 3 T13: 0.0693 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 0.8635 L22: 0.7357 REMARK 3 L33: 1.1272 L12: 0.7513 REMARK 3 L13: 0.2324 L23: -0.1325 REMARK 3 S TENSOR REMARK 3 S11: 0.0519 S12: -0.1887 S13: 0.4315 REMARK 3 S21: 0.0964 S22: 0.1749 S23: 0.1655 REMARK 3 S31: -0.5016 S32: 0.2248 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8WD4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1300041016. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16233 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 45.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.46 M TRISODIUM CITRATE, PH 7.0, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 72.66350 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 72.66350 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 72.66350 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 72.66350 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 72.66350 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 72.66350 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 72.66350 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 72.66350 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 72.66350 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 72.66350 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 72.66350 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 72.66350 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 72.66350 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 72.66350 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 72.66350 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 72.66350 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 72.66350 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 72.66350 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 72.66350 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 72.66350 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 72.66350 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 72.66350 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 72.66350 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 72.66350 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 72.66350 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 72.66350 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 72.66350 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 72.66350 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 72.66350 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 72.66350 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 72.66350 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 72.66350 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 72.66350 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 72.66350 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 72.66350 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 72.66350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 748 REMARK 465 GLU A 749 REMARK 465 ALA A 750 REMARK 465 GLY A 863 REMARK 465 ALA A 864 REMARK 465 ALA A 865 REMARK 465 ALA A 866 REMARK 465 ALA A 867 REMARK 465 GLU A 868 REMARK 465 TYR A 869 REMARK 465 HIS A 870 REMARK 465 ALA A 871 REMARK 465 GLU A 872 REMARK 465 GLY A 873 REMARK 465 SER A 991 REMARK 465 PRO A 992 REMARK 465 THR A 993 REMARK 465 ASP A 994 REMARK 465 SER A 995 REMARK 465 ASN A 996 REMARK 465 PHE A 997 REMARK 465 TYR A 998 REMARK 465 ARG A 999 REMARK 465 ALA A 1000 REMARK 465 LEU A 1001 REMARK 465 MET A 1002 REMARK 465 ASP A 1003 REMARK 465 GLN A 1020 REMARK 465 GLN A 1021 REMARK 465 GLY A 1022 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 MET A 695 CE REMARK 480 LYS A 716 NZ REMARK 480 LYS A 737 CE NZ REMARK 480 LYS A 754 CE NZ REMARK 480 LYS A 806 NZ REMARK 480 ARG A 832 CZ NH1 NH2 REMARK 480 LYS A 860 NZ REMARK 480 LYS A 875 CE NZ REMARK 480 ILE A 878 CD1 REMARK 480 ILE A 890 CD1 REMARK 480 LYS A 913 NZ REMARK 480 GLU A 922 CD OE1 OE2 REMARK 480 LYS A 960 NZ REMARK 480 ARG A 973 CZ NH1 NH2 REMARK 480 ARG A 986 NE CZ NH1 NH2 REMARK 480 HIS A 988 CG ND1 CD2 CE1 NE2 REMARK 480 GLU A 1004 CD OE1 OE2 REMARK 480 MET A 1007 SD CE REMARK 480 ILE A 1018 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 701 32.58 -91.35 REMARK 500 LEU A 782 66.57 -101.10 REMARK 500 ASP A 837 38.27 -165.73 REMARK 500 ASP A 855 74.80 67.07 REMARK 500 REMARK 500 REMARK: NULL DBREF 8WD4 A 696 1022 UNP P00533 EGFR_HUMAN 696 1022 SEQADV 8WD4 SER A 694 UNP P00533 EXPRESSION TAG SEQADV 8WD4 MET A 695 UNP P00533 EXPRESSION TAG SEQADV 8WD4 MET A 790 UNP P00533 THR 790 ENGINEERED MUTATION SEQADV 8WD4 SER A 797 UNP P00533 CYS 797 ENGINEERED MUTATION SEQADV 8WD4 ARG A 858 UNP P00533 LEU 858 ENGINEERED MUTATION SEQADV 8WD4 ALA A 865 UNP P00533 GLU 865 CONFLICT SEQADV 8WD4 ALA A 866 UNP P00533 GLU 866 CONFLICT SEQADV 8WD4 ALA A 867 UNP P00533 LYS 867 CONFLICT SEQRES 1 A 329 SER MET GLY GLU ALA PRO ASN GLN ALA LEU LEU ARG ILE SEQRES 2 A 329 LEU LYS GLU THR GLU PHE LYS LYS ILE LYS VAL LEU GLY SEQRES 3 A 329 SER GLY ALA PHE GLY THR VAL TYR LYS GLY LEU TRP ILE SEQRES 4 A 329 PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA ILE LYS SEQRES 5 A 329 GLU LEU ARG GLU ALA THR SER PRO LYS ALA ASN LYS GLU SEQRES 6 A 329 ILE LEU ASP GLU ALA TYR VAL MET ALA SER VAL ASP ASN SEQRES 7 A 329 PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU THR SER SEQRES 8 A 329 THR VAL GLN LEU ILE MET GLN LEU MET PRO PHE GLY SER SEQRES 9 A 329 LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN ILE GLY SEQRES 10 A 329 SER GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE ALA LYS SEQRES 11 A 329 GLY MET ASN TYR LEU GLU ASP ARG ARG LEU VAL HIS ARG SEQRES 12 A 329 ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS THR PRO GLN SEQRES 13 A 329 HIS VAL LYS ILE THR ASP PHE GLY ARG ALA LYS LEU LEU SEQRES 14 A 329 GLY ALA ALA ALA ALA GLU TYR HIS ALA GLU GLY GLY LYS SEQRES 15 A 329 VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE LEU HIS SEQRES 16 A 329 ARG ILE TYR THR HIS GLN SER ASP VAL TRP SER TYR GLY SEQRES 17 A 329 VAL THR VAL TRP GLU LEU MET THR PHE GLY SER LYS PRO SEQRES 18 A 329 TYR ASP GLY ILE PRO ALA SER GLU ILE SER SER ILE LEU SEQRES 19 A 329 GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS THR SEQRES 20 A 329 ILE ASP VAL TYR MET ILE MET VAL LYS CYS TRP MET ILE SEQRES 21 A 329 ASP ALA ASP SER ARG PRO LYS PHE ARG GLU LEU ILE ILE SEQRES 22 A 329 GLU PHE SER LYS MET ALA ARG ASP PRO GLN ARG TYR LEU SEQRES 23 A 329 VAL ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SER PRO SEQRES 24 A 329 THR ASP SER ASN PHE TYR ARG ALA LEU MET ASP GLU GLU SEQRES 25 A 329 ASP MET ASP ASP VAL VAL ASP ALA ASP GLU TYR LEU ILE SEQRES 26 A 329 PRO GLN GLN GLY HET W7W A1101 37 HET CL A1102 1 HETNAM W7W ~{N}-[3,3-BIS(FLUORANYL)PROPYL]-4-[[(2~{S})-BUTAN-2- HETNAM 2 W7W YL]AMINO]-6-[[2-(1-CYCLOPROPYLSULFONYLPYRAZOL-4-YL) HETNAM 3 W7W PYRIMIDIN-4-YL]AMINO]PYRIDINE-3-CARBOXAMIDE HETNAM CL CHLORIDE ION FORMUL 2 W7W C23 H28 F2 N8 O3 S FORMUL 3 CL CL 1- FORMUL 4 HOH *37(H2 O) HELIX 1 AA1 LYS A 708 THR A 710 5 3 HELIX 2 AA2 SER A 752 SER A 768 1 17 HELIX 3 AA3 SER A 797 HIS A 805 1 9 HELIX 4 AA4 LYS A 806 ILE A 809 5 4 HELIX 5 AA5 GLY A 810 ARG A 831 1 22 HELIX 6 AA6 ALA A 839 ARG A 841 5 3 HELIX 7 AA7 PRO A 877 MET A 881 5 5 HELIX 8 AA8 ALA A 882 ARG A 889 1 8 HELIX 9 AA9 THR A 892 THR A 909 1 18 HELIX 10 AB1 GLU A 922 GLY A 930 1 9 HELIX 11 AB2 THR A 940 TRP A 951 1 12 HELIX 12 AB3 LYS A 960 ARG A 973 1 14 HELIX 13 AB4 ASP A 974 LEU A 979 1 6 HELIX 14 AB5 ASP A 1012 TYR A 1016 5 5 SHEET 1 AA1 5 PHE A 712 SER A 720 0 SHEET 2 AA1 5 THR A 725 TRP A 731 -1 O LYS A 728 N LYS A 716 SHEET 3 AA1 5 ILE A 740 GLU A 746 -1 O ILE A 740 N TRP A 731 SHEET 4 AA1 5 VAL A 786 GLN A 791 -1 O MET A 790 N ALA A 743 SHEET 5 AA1 5 LEU A 777 LEU A 782 -1 N GLY A 779 O ILE A 789 SHEET 1 AA2 2 LEU A 833 VAL A 834 0 SHEET 2 AA2 2 LYS A 860 LEU A 861 -1 O LYS A 860 N VAL A 834 SHEET 1 AA3 2 VAL A 843 THR A 847 0 SHEET 2 AA3 2 HIS A 850 ILE A 853 -1 O LYS A 852 N LEU A 844 CRYST1 145.327 145.327 145.327 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006881 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006881 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006881 0.00000