data_8WNB # _entry.id 8WNB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8WNB pdb_00008wnb 10.2210/pdb8wnb/pdb WWPDB D_1300041628 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-05-29 2 'Structure model' 1 1 2024-08-14 3 'Structure model' 1 2 2024-08-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.page_last' 13 3 'Structure model' '_citation_author.identifier_ORCID' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8WNB _pdbx_database_status.recvd_initial_deposition_date 2023-10-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email mhho@dragon.nchu.edu.tw _pdbx_contact_author.name_first Ming-Hon _pdbx_contact_author.name_last Hou _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4170-1527 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hou, M.H.' 1 ? 'Huang, H.T.' 2 ? 'Lin, S.M.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 52 _citation.language ? _citation.page_first 8566 _citation.page_last 8579 _citation.title 'Structural basis of water-mediated cis Watson-Crick/Hoogsteen base-pair formation in non-CpG methylation.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkae594 _citation.pdbx_database_id_PubMed 38989613 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lin, S.M.' 1 ? primary 'Huang, H.T.' 2 ? primary 'Fang, P.J.' 3 ? primary 'Chang, C.F.' 4 ? primary 'Satange, R.' 5 ? primary 'Chang, C.K.' 6 ? primary 'Chou, S.H.' 7 ? primary 'Neidle, S.' 8 ? primary 'Hou, M.H.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*AP*CP*GP*CP*CP*GP*T)-3') ; 2098.399 4 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*AP*CP*GP*IP*CP*GP*T)-3') ; 2123.409 4 ? ? ? ? 3 water nat water 18.015 13 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DC)(DG)(DC)(DC)(DG)(DT)' ACGCCGT A,C,E,G ? 2 polydeoxyribonucleotide no no '(DA)(DC)(DG)(DI)(DC)(DG)(DT)' ACGICGT B,D,F,H ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DC n 1 3 DG n 1 4 DC n 1 5 DC n 1 6 DG n 1 7 DT n 2 1 DA n 2 2 DC n 2 3 DG n 2 4 DI n 2 5 DC n 2 6 DG n 2 7 DT n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 7 'synthetic construct' ? 32630 ? 2 1 sample 1 7 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DI 'DNA linking' y "2'-DEOXYINOSINE-5'-MONOPHOSPHATE" ? 'C10 H13 N4 O7 P' 332.207 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA DA A . n A 1 2 DC 2 2 2 DC DC A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DT 7 7 7 DT DT A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DC 2 2 2 DC DC B . n B 2 3 DG 3 3 3 DG DG B . n B 2 4 DI 4 4 4 DI DI B . n B 2 5 DC 5 5 5 DC DC B . n B 2 6 DG 6 6 6 DG DG B . n B 2 7 DT 7 7 7 DT DT B . n C 1 1 DA 1 1 1 DA DA C . n C 1 2 DC 2 2 2 DC DC C . n C 1 3 DG 3 3 3 DG DG C . n C 1 4 DC 4 4 4 DC DC C . n C 1 5 DC 5 5 5 DC DC C . n C 1 6 DG 6 6 6 DG DG C . n C 1 7 DT 7 7 7 DT DT C . n D 2 1 DA 1 1 1 DA DA D . n D 2 2 DC 2 2 2 DC DC D . n D 2 3 DG 3 3 3 DG DG D . n D 2 4 DI 4 4 4 DI DI D . n D 2 5 DC 5 5 5 DC DC D . n D 2 6 DG 6 6 6 DG DG D . n D 2 7 DT 7 7 7 DT DT D . n E 1 1 DA 1 1 1 DA DA E . n E 1 2 DC 2 2 2 DC DC E . n E 1 3 DG 3 3 3 DG DG E . n E 1 4 DC 4 4 4 DC DC E . n E 1 5 DC 5 5 5 DC DC E . n E 1 6 DG 6 6 6 DG DG E . n E 1 7 DT 7 7 7 DT DT E . n F 2 1 DA 1 1 1 DA DA F . n F 2 2 DC 2 2 2 DC DC F . n F 2 3 DG 3 3 3 DG DG F . n F 2 4 DI 4 4 4 DI DI F . n F 2 5 DC 5 5 5 DC DC F . n F 2 6 DG 6 6 6 DG DG F . n F 2 7 DT 7 7 7 DT DT F . n G 1 1 DA 1 1 1 DA DA G . n G 1 2 DC 2 2 2 DC DC G . n G 1 3 DG 3 3 3 DG DG G . n G 1 4 DC 4 4 4 DC DC G . n G 1 5 DC 5 5 5 DC DC G . n G 1 6 DG 6 6 6 DG DG G . n G 1 7 DT 7 7 7 DT DT G . n H 2 1 DA 1 1 1 DA DA H . n H 2 2 DC 2 2 2 DC DC H . n H 2 3 DG 3 3 3 DG DG H . n H 2 4 DI 4 4 4 DI DI H . n H 2 5 DC 5 5 5 DC DC H . n H 2 6 DG 6 6 6 DG DG H . n H 2 7 DT 7 7 7 DT DT H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 HOH 1 101 13 HOH HOH A . J 3 HOH 1 101 8 HOH HOH C . J 3 HOH 2 102 9 HOH HOH C . K 3 HOH 1 101 7 HOH HOH E . K 3 HOH 2 102 3 HOH HOH E . L 3 HOH 1 101 2 HOH HOH F . L 3 HOH 2 102 1 HOH HOH F . M 3 HOH 1 101 4 HOH HOH G . M 3 HOH 2 102 6 HOH HOH G . N 3 HOH 1 101 11 HOH HOH H . N 3 HOH 2 102 5 HOH HOH H . N 3 HOH 3 103 10 HOH HOH H . N 3 HOH 4 104 12 HOH HOH H . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.20.1_4487: ???)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8WNB _cell.details ? _cell.formula_units_Z ? _cell.length_a 46.441 _cell.length_a_esd ? _cell.length_b 46.563 _cell.length_b_esd ? _cell.length_c 74.708 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8WNB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8WNB _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30mM MES (pH 6.5), 1mM Spermine HCl, 8% PEG 400, 1.5mM MgCl2' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-05-20 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSRRC BEAMLINE BL15A1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL15A1 _diffrn_source.pdbx_synchrotron_site NSRRC # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8WNB _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.48 _reflns.d_resolution_low 30.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 5955 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.5 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.042 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 2.49 2.58 ? ? ? ? ? ? 587 ? ? ? ? ? ? ? ? ? ? ? 4.9 1.091 ? ? 0.540 0.241 ? 1 1 0.944 0.985 ? 100.0 ? 0.482 ? ? ? ? ? ? ? ? ? 2.58 2.68 ? ? ? ? ? ? 603 ? ? ? ? ? ? ? ? ? ? ? 4.8 1.087 ? ? 0.374 0.168 ? 2 1 0.970 0.992 ? 100.0 ? 0.333 ? ? ? ? ? ? ? ? ? 2.68 2.80 ? ? ? ? ? ? 586 ? ? ? ? ? ? ? ? ? ? ? 4.8 1.055 ? ? 0.247 0.112 ? 3 1 0.988 0.997 ? 100.0 ? 0.220 ? ? ? ? ? ? ? ? ? 2.80 2.95 ? ? ? ? ? ? 609 ? ? ? ? ? ? ? ? ? ? ? 4.8 1.085 ? ? 0.165 0.075 ? 4 1 0.994 0.999 ? 100.0 ? 0.147 ? ? ? ? ? ? ? ? ? 2.95 3.14 ? ? ? ? ? ? 608 ? ? ? ? ? ? ? ? ? ? ? 4.8 0.986 ? ? 0.101 0.046 ? 5 1 0.998 1.000 ? 100.0 ? 0.090 ? ? ? ? ? ? ? ? ? 3.14 3.38 ? ? ? ? ? ? 576 ? ? ? ? ? ? ? ? ? ? ? 4.6 0.994 ? ? 0.052 0.025 ? 6 1 0.999 1.000 ? 95.8 ? 0.046 ? ? ? ? ? ? ? ? ? 3.38 3.72 ? ? ? ? ? ? 574 ? ? ? ? ? ? ? ? ? ? ? 4.5 0.979 ? ? 0.050 0.024 ? 7 1 0.999 1.000 ? 96.1 ? 0.044 ? ? ? ? ? ? ? ? ? 3.72 4.25 ? ? ? ? ? ? 604 ? ? ? ? ? ? ? ? ? ? ? 4.3 0.947 ? ? 0.035 0.017 ? 8 1 0.999 1.000 ? 96.6 ? 0.031 ? ? ? ? ? ? ? ? ? 4.25 5.36 ? ? ? ? ? ? 583 ? ? ? ? ? ? ? ? ? ? ? 4.0 1.060 ? ? 0.029 0.014 ? 9 1 0.999 1.000 ? 93.7 ? 0.025 ? ? ? ? ? ? ? ? ? 5.36 30.00 ? ? ? ? ? ? 625 ? ? ? ? ? ? ? ? ? ? ? 3.8 1.003 ? ? 0.021 0.011 ? 10 1 1.000 1.000 ? 91.2 ? 0.018 ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8WNB _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.48 _refine.ls_d_res_low 21.96 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 5845 _refine.ls_number_reflns_R_free 584 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 95.60 _refine.ls_percent_reflns_R_free 9.99 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2499 _refine.ls_R_factor_R_free 0.2681 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2477 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 39.73 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.41 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.48 _refine_hist.d_res_low 21.96 _refine_hist.number_atoms_solvent 13 _refine_hist.number_atoms_total 1133 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1120 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? ? ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.150 ? ? ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 33.609 ? 512 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.067 ? 212 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 56 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.48 2.73 . . 143 1325 98.00 . . . . 0.4041 . . . . . . . . . . . 0.4747 'X-RAY DIFFRACTION' 2.73 3.12 . . 151 1316 98.00 . . . . 0.3622 . . . . . . . . . . . 0.4084 'X-RAY DIFFRACTION' 3.12 3.93 . . 142 1273 94.00 . . . . 0.2648 . . . . . . . . . . . 0.2828 'X-RAY DIFFRACTION' 3.93 10 . . 148 1347 93.00 . . . . 0.1858 . . . . . . . . . . . 0.1952 # _struct.entry_id 8WNB _struct.title 'Crystal structure of d(ACGCCGT/ACGICGT)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8WNB _struct_keywords.text 'naked DNA duplex, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 1 ? F N N 2 ? G N N 1 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8WNB 8WNB ? 1 ? 1 2 PDB 8WNB 8WNB ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8WNB A 1 ? 7 ? 8WNB 1 ? 7 ? 1 7 2 2 8WNB B 1 ? 7 ? 8WNB 1 ? 7 ? 1 7 3 1 8WNB C 1 ? 7 ? 8WNB 1 ? 7 ? 1 7 4 2 8WNB D 1 ? 7 ? 8WNB 1 ? 7 ? 1 7 5 1 8WNB E 1 ? 7 ? 8WNB 1 ? 7 ? 1 7 6 2 8WNB F 1 ? 7 ? 8WNB 1 ? 7 ? 1 7 7 1 8WNB G 1 ? 7 ? 8WNB 1 ? 7 ? 1 7 8 2 8WNB H 1 ? 7 ? 8WNB 1 ? 7 ? 1 7 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 3 author_and_software_defined_assembly PISA dimeric 2 4 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 640 ? 1 MORE -3 ? 1 'SSA (A^2)' 2800 ? 2 'ABSA (A^2)' 640 ? 2 MORE -4 ? 2 'SSA (A^2)' 2790 ? 3 'ABSA (A^2)' 630 ? 3 MORE -3 ? 3 'SSA (A^2)' 2790 ? 4 'ABSA (A^2)' 630 ? 4 MORE -3 ? 4 'SSA (A^2)' 2790 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,I 2 1 C,D,J 3 1 E,F,K,L 4 1 G,H,M,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 1 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 1 B DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 2 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 2 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 2 B DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 3 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 3 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 3 B DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DI 4 N1 ? ? A DC 4 B DI 4 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog10 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DI 4 O6 ? ? A DC 4 B DI 4 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog11 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 5 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 5 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 5 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 6 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 6 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 6 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 1 N1 ? ? A DT 7 B DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 1 N6 ? ? A DT 7 B DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DA 1 N1 ? ? ? 1_555 D DT 7 N3 ? ? C DA 1 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DA 1 N6 ? ? ? 1_555 D DT 7 O4 ? ? C DA 1 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 6 N1 ? ? C DC 2 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 6 O6 ? ? C DC 2 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 6 N2 ? ? C DC 2 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 5 N3 ? ? C DG 3 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 5 O2 ? ? C DG 3 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 5 N4 ? ? C DG 3 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DC 4 N3 ? ? ? 1_555 D DI 4 N1 ? ? C DC 4 D DI 4 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog28 hydrog ? ? C DC 4 N4 ? ? ? 1_555 D DI 4 O6 ? ? C DC 4 D DI 4 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog29 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 3 N1 ? ? C DC 5 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D DG 3 O6 ? ? C DC 5 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D DG 3 N2 ? ? C DC 5 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DC 2 N3 ? ? C DG 6 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 6 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DC 2 N4 ? ? C DG 6 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DT 7 N3 ? ? ? 1_555 D DA 1 N1 ? ? C DT 7 D DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DT 7 O4 ? ? ? 1_555 D DA 1 N6 ? ? C DT 7 D DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DA 1 N1 ? ? ? 1_555 F DT 7 N3 ? ? E DA 1 F DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DA 1 N6 ? ? ? 1_555 F DT 7 O4 ? ? E DA 1 F DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DC 2 N3 ? ? ? 1_555 F DG 6 N1 ? ? E DC 2 F DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DC 2 N4 ? ? ? 1_555 F DG 6 O6 ? ? E DC 2 F DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DC 2 O2 ? ? ? 1_555 F DG 6 N2 ? ? E DC 2 F DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DG 3 N1 ? ? ? 1_555 F DC 5 N3 ? ? E DG 3 F DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DG 3 N2 ? ? ? 1_555 F DC 5 O2 ? ? E DG 3 F DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DG 3 O6 ? ? ? 1_555 F DC 5 N4 ? ? E DG 3 F DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DC 4 N3 ? ? ? 1_555 F DI 4 N1 ? ? E DC 4 F DI 4 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog46 hydrog ? ? E DC 4 N4 ? ? ? 1_555 F DI 4 O6 ? ? E DC 4 F DI 4 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog47 hydrog ? ? E DC 5 N3 ? ? ? 1_555 F DG 3 N1 ? ? E DC 5 F DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DC 5 N4 ? ? ? 1_555 F DG 3 O6 ? ? E DC 5 F DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E DC 5 O2 ? ? ? 1_555 F DG 3 N2 ? ? E DC 5 F DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E DG 6 N1 ? ? ? 1_555 F DC 2 N3 ? ? E DG 6 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E DG 6 N2 ? ? ? 1_555 F DC 2 O2 ? ? E DG 6 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E DG 6 O6 ? ? ? 1_555 F DC 2 N4 ? ? E DG 6 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DT 7 N3 ? ? ? 1_555 F DA 1 N1 ? ? E DT 7 F DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DT 7 O4 ? ? ? 1_555 F DA 1 N6 ? ? E DT 7 F DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? G DA 1 N1 ? ? ? 1_555 H DT 7 N3 ? ? G DA 1 H DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? G DA 1 N6 ? ? ? 1_555 H DT 7 O4 ? ? G DA 1 H DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? G DC 2 N3 ? ? ? 1_555 H DG 6 N1 ? ? G DC 2 H DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? G DC 2 N4 ? ? ? 1_555 H DG 6 O6 ? ? G DC 2 H DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? G DC 2 O2 ? ? ? 1_555 H DG 6 N2 ? ? G DC 2 H DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? G DG 3 N1 ? ? ? 1_555 H DC 5 N3 ? ? G DG 3 H DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? G DG 3 N2 ? ? ? 1_555 H DC 5 O2 ? ? G DG 3 H DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? G DG 3 O6 ? ? ? 1_555 H DC 5 N4 ? ? G DG 3 H DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? G DC 4 N3 ? ? ? 1_555 H DI 4 N1 ? ? G DC 4 H DI 4 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog64 hydrog ? ? G DC 4 N4 ? ? ? 1_555 H DI 4 O6 ? ? G DC 4 H DI 4 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog65 hydrog ? ? G DC 5 N3 ? ? ? 1_555 H DG 3 N1 ? ? G DC 5 H DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? G DC 5 N4 ? ? ? 1_555 H DG 3 O6 ? ? G DC 5 H DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? G DC 5 O2 ? ? ? 1_555 H DG 3 N2 ? ? G DC 5 H DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? G DG 6 N1 ? ? ? 1_555 H DC 2 N3 ? ? G DG 6 H DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? G DG 6 N2 ? ? ? 1_555 H DC 2 O2 ? ? G DG 6 H DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? G DG 6 O6 ? ? ? 1_555 H DC 2 N4 ? ? G DG 6 H DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? G DT 7 N3 ? ? ? 1_555 H DA 1 N1 ? ? G DT 7 H DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? G DT 7 O4 ? ? ? 1_555 H DA 1 N6 ? ? G DT 7 H DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C4'" B DI 4 ? ? "C3'" B DI 4 ? ? 1.273 1.524 -0.251 0.020 N 2 1 "C3'" B DI 4 ? ? "C2'" B DI 4 ? ? 1.660 1.524 0.136 0.020 N 3 1 "C2'" B DI 4 ? ? "C1'" B DI 4 ? ? 1.272 1.524 -0.252 0.020 N 4 1 "O4'" B DI 4 ? ? "C1'" B DI 4 ? ? 1.556 1.410 0.146 0.020 N 5 1 "O4'" B DI 4 ? ? "C4'" B DI 4 ? ? 1.558 1.410 0.148 0.020 N 6 1 N3 B DI 4 ? ? C4 B DI 4 ? ? 1.489 1.355 0.134 0.020 N 7 1 C5 B DI 4 ? ? C6 B DI 4 ? ? 1.533 1.390 0.143 0.020 N 8 1 "C4'" D DI 4 ? ? "C3'" D DI 4 ? ? 1.288 1.524 -0.236 0.020 N 9 1 "C3'" D DI 4 ? ? "C2'" D DI 4 ? ? 1.669 1.524 0.145 0.020 N 10 1 "C2'" D DI 4 ? ? "C1'" D DI 4 ? ? 1.275 1.524 -0.249 0.020 N 11 1 "O4'" D DI 4 ? ? "C1'" D DI 4 ? ? 1.547 1.410 0.137 0.020 N 12 1 "O4'" D DI 4 ? ? "C4'" D DI 4 ? ? 1.548 1.410 0.138 0.020 N 13 1 N3 D DI 4 ? ? C4 D DI 4 ? ? 1.486 1.355 0.131 0.020 N 14 1 C5 D DI 4 ? ? C6 D DI 4 ? ? 1.535 1.390 0.145 0.020 N 15 1 "C4'" F DI 4 ? ? "C3'" F DI 4 ? ? 1.282 1.524 -0.242 0.020 N 16 1 "C3'" F DI 4 ? ? "C2'" F DI 4 ? ? 1.652 1.524 0.128 0.020 N 17 1 "C2'" F DI 4 ? ? "C1'" F DI 4 ? ? 1.272 1.524 -0.252 0.020 N 18 1 "O4'" F DI 4 ? ? "C1'" F DI 4 ? ? 1.549 1.410 0.139 0.020 N 19 1 "O4'" F DI 4 ? ? "C4'" F DI 4 ? ? 1.552 1.410 0.142 0.020 N 20 1 N3 F DI 4 ? ? C4 F DI 4 ? ? 1.485 1.355 0.130 0.020 N 21 1 C5 F DI 4 ? ? C6 F DI 4 ? ? 1.522 1.390 0.132 0.020 N 22 1 "C4'" H DI 4 ? ? "C3'" H DI 4 ? ? 1.263 1.524 -0.261 0.020 N 23 1 "C3'" H DI 4 ? ? "C2'" H DI 4 ? ? 1.657 1.524 0.133 0.020 N 24 1 "C2'" H DI 4 ? ? "C1'" H DI 4 ? ? 1.258 1.524 -0.266 0.020 N 25 1 "O4'" H DI 4 ? ? "C1'" H DI 4 ? ? 1.552 1.410 0.142 0.020 N 26 1 "O4'" H DI 4 ? ? "C4'" H DI 4 ? ? 1.546 1.410 0.136 0.020 N 27 1 "O3'" H DI 4 ? ? "C3'" H DI 4 ? ? 1.549 1.410 0.139 0.020 N 28 1 C5 H DI 4 ? ? C6 H DI 4 ? ? 1.516 1.390 0.126 0.020 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C8 B DI 4 ? ? N9 B DI 4 ? ? "C1'" B DI 4 ? ? 106.45 126.00 -19.55 3.00 N 2 1 C4 B DI 4 ? ? N9 B DI 4 ? ? "C1'" B DI 4 ? ? 145.01 126.00 19.01 3.00 N 3 1 C8 D DI 4 ? ? N9 D DI 4 ? ? "C1'" D DI 4 ? ? 107.58 126.00 -18.42 3.00 N 4 1 C4 D DI 4 ? ? N9 D DI 4 ? ? "C1'" D DI 4 ? ? 144.00 126.00 18.00 3.00 N 5 1 C8 F DI 4 ? ? N9 F DI 4 ? ? "C1'" F DI 4 ? ? 107.23 126.00 -18.77 3.00 N 6 1 "C3'" H DG 3 ? ? "O3'" H DG 3 ? ? P H DI 4 ? ? 133.58 119.70 13.88 1.20 Y 7 1 "O3'" H DG 3 ? ? P H DI 4 ? ? OP2 H DI 4 ? ? 121.56 110.50 11.06 1.10 Y 8 1 "C3'" H DI 4 ? ? "O3'" H DI 4 ? ? P H DC 5 ? ? 130.67 119.70 10.97 1.20 Y 9 1 "O3'" H DI 4 ? ? P H DC 5 ? ? OP2 H DC 5 ? ? 119.87 110.50 9.37 1.10 Y # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 46.8335 _pdbx_refine_tls.origin_y 95.5747 _pdbx_refine_tls.origin_z 82.2085 _pdbx_refine_tls.T[1][1] 0.4194 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0632 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0350 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.4982 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.1189 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.6314 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 3.9982 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -1.1426 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.0911 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 1.5979 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.0559 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.7126 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0137 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.5668 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.2124 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0385 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.1318 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.0861 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0769 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0450 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.1392 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DI OP3 O N N 108 DI P P N N 109 DI OP1 O N N 110 DI OP2 O N N 111 DI "O5'" O N N 112 DI "C5'" C N N 113 DI "C4'" C N R 114 DI "O4'" O N N 115 DI "C3'" C N S 116 DI "O3'" O N N 117 DI "C2'" C N N 118 DI "C1'" C N R 119 DI N9 N Y N 120 DI C8 C Y N 121 DI N7 N Y N 122 DI C5 C Y N 123 DI C6 C N N 124 DI O6 O N N 125 DI N1 N N N 126 DI C2 C N N 127 DI N3 N N N 128 DI C4 C Y N 129 DI HOP3 H N N 130 DI HOP2 H N N 131 DI "H5'" H N N 132 DI "H5''" H N N 133 DI "H4'" H N N 134 DI "H3'" H N N 135 DI "HO3'" H N N 136 DI "H2'" H N N 137 DI "H2''" H N N 138 DI "H1'" H N N 139 DI H8 H N N 140 DI H1 H N N 141 DI H2 H N N 142 DT OP3 O N N 143 DT P P N N 144 DT OP1 O N N 145 DT OP2 O N N 146 DT "O5'" O N N 147 DT "C5'" C N N 148 DT "C4'" C N R 149 DT "O4'" O N N 150 DT "C3'" C N S 151 DT "O3'" O N N 152 DT "C2'" C N N 153 DT "C1'" C N R 154 DT N1 N N N 155 DT C2 C N N 156 DT O2 O N N 157 DT N3 N N N 158 DT C4 C N N 159 DT O4 O N N 160 DT C5 C N N 161 DT C7 C N N 162 DT C6 C N N 163 DT HOP3 H N N 164 DT HOP2 H N N 165 DT "H5'" H N N 166 DT "H5''" H N N 167 DT "H4'" H N N 168 DT "H3'" H N N 169 DT "HO3'" H N N 170 DT "H2'" H N N 171 DT "H2''" H N N 172 DT "H1'" H N N 173 DT H3 H N N 174 DT H71 H N N 175 DT H72 H N N 176 DT H73 H N N 177 DT H6 H N N 178 HOH O O N N 179 HOH H1 H N N 180 HOH H2 H N N 181 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DI OP3 P sing N N 113 DI OP3 HOP3 sing N N 114 DI P OP1 doub N N 115 DI P OP2 sing N N 116 DI P "O5'" sing N N 117 DI OP2 HOP2 sing N N 118 DI "O5'" "C5'" sing N N 119 DI "C5'" "C4'" sing N N 120 DI "C5'" "H5'" sing N N 121 DI "C5'" "H5''" sing N N 122 DI "C4'" "O4'" sing N N 123 DI "C4'" "C3'" sing N N 124 DI "C4'" "H4'" sing N N 125 DI "O4'" "C1'" sing N N 126 DI "C3'" "O3'" sing N N 127 DI "C3'" "C2'" sing N N 128 DI "C3'" "H3'" sing N N 129 DI "O3'" "HO3'" sing N N 130 DI "C2'" "C1'" sing N N 131 DI "C2'" "H2'" sing N N 132 DI "C2'" "H2''" sing N N 133 DI "C1'" N9 sing N N 134 DI "C1'" "H1'" sing N N 135 DI N9 C8 sing Y N 136 DI N9 C4 sing Y N 137 DI C8 N7 doub Y N 138 DI C8 H8 sing N N 139 DI N7 C5 sing Y N 140 DI C5 C6 sing N N 141 DI C5 C4 doub Y N 142 DI C6 O6 doub N N 143 DI C6 N1 sing N N 144 DI N1 C2 sing N N 145 DI N1 H1 sing N N 146 DI C2 N3 doub N N 147 DI C2 H2 sing N N 148 DI N3 C4 sing N N 149 DT OP3 P sing N N 150 DT OP3 HOP3 sing N N 151 DT P OP1 doub N N 152 DT P OP2 sing N N 153 DT P "O5'" sing N N 154 DT OP2 HOP2 sing N N 155 DT "O5'" "C5'" sing N N 156 DT "C5'" "C4'" sing N N 157 DT "C5'" "H5'" sing N N 158 DT "C5'" "H5''" sing N N 159 DT "C4'" "O4'" sing N N 160 DT "C4'" "C3'" sing N N 161 DT "C4'" "H4'" sing N N 162 DT "O4'" "C1'" sing N N 163 DT "C3'" "O3'" sing N N 164 DT "C3'" "C2'" sing N N 165 DT "C3'" "H3'" sing N N 166 DT "O3'" "HO3'" sing N N 167 DT "C2'" "C1'" sing N N 168 DT "C2'" "H2'" sing N N 169 DT "C2'" "H2''" sing N N 170 DT "C1'" N1 sing N N 171 DT "C1'" "H1'" sing N N 172 DT N1 C2 sing N N 173 DT N1 C6 sing N N 174 DT C2 O2 doub N N 175 DT C2 N3 sing N N 176 DT N3 C4 sing N N 177 DT N3 H3 sing N N 178 DT C4 O4 doub N N 179 DT C4 C5 sing N N 180 DT C5 C7 sing N N 181 DT C5 C6 doub N N 182 DT C7 H71 sing N N 183 DT C7 H72 sing N N 184 DT C7 H73 sing N N 185 DT C6 H6 sing N N 186 HOH O H1 sing N N 187 HOH O H2 sing N N 188 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8WNB 'double helix' 8WNB 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 B DT 7 1_555 0.032 -0.114 0.385 2.563 -8.630 2.039 1 A_DA1:DT7_B A 1 ? B 7 ? 20 1 1 A DC 2 1_555 B DG 6 1_555 0.202 -0.136 0.126 -1.565 -11.860 0.794 2 A_DC2:DG6_B A 2 ? B 6 ? 19 1 1 A DG 3 1_555 B DC 5 1_555 -0.251 -0.101 0.155 -2.681 -9.595 0.417 3 A_DG3:DC5_B A 3 ? B 5 ? 19 1 1 A DC 4 1_555 B DI 4 1_555 -0.334 -0.155 0.208 1.367 -6.708 9.100 4 A_DC4:DI4_B A 4 ? B 4 ? 29 1 1 A DC 5 1_555 B DG 3 1_555 0.208 -0.146 0.279 1.744 -3.542 0.674 5 A_DC5:DG3_B A 5 ? B 3 ? 19 1 1 A DG 6 1_555 B DC 2 1_555 -0.154 -0.129 0.449 9.414 -11.028 1.618 6 A_DG6:DC2_B A 6 ? B 2 ? 19 1 1 A DT 7 1_555 B DA 1 1_555 -0.034 -0.099 0.047 2.633 -15.383 3.059 7 A_DT7:DA1_B A 7 ? B 1 ? 20 1 1 D DA 1 1_555 C DT 7 1_555 0.043 -0.140 0.219 2.849 -8.932 2.527 8 D_DA1:DT7_C D 1 ? C 7 ? 20 1 1 D DC 2 1_555 C DG 6 1_555 0.169 -0.156 0.289 -4.079 -10.595 0.935 9 D_DC2:DG6_C D 2 ? C 6 ? 19 1 1 D DG 3 1_555 C DC 5 1_555 -0.193 -0.146 -0.141 3.570 -5.549 0.346 10 D_DG3:DC5_C D 3 ? C 5 ? 19 1 1 D DI 4 1_555 C DC 4 1_555 0.224 -0.374 -0.032 0.283 -8.072 5.578 11 D_DI4:DC4_C D 4 ? C 4 ? 29 1 1 D DC 5 1_555 C DG 3 1_555 0.195 -0.143 -0.069 1.125 -5.849 0.989 12 D_DC5:DG3_C D 5 ? C 3 ? 19 1 1 D DG 6 1_555 C DC 2 1_555 -0.152 -0.135 0.108 3.463 -8.768 0.323 13 D_DG6:DC2_C D 6 ? C 2 ? 19 1 1 D DT 7 1_555 C DA 1 1_555 -0.004 -0.075 0.133 -0.418 -8.876 3.355 14 D_DT7:DA1_C D 7 ? C 1 ? 20 1 1 E DA 1 1_555 F DT 7 1_555 0.047 -0.186 0.096 1.265 -7.225 2.401 15 E_DA1:DT7_F E 1 ? F 7 ? 20 1 1 E DC 2 1_555 F DG 6 1_555 0.174 -0.176 0.161 2.230 -4.901 0.276 16 E_DC2:DG6_F E 2 ? F 6 ? 19 1 1 E DG 3 1_555 F DC 5 1_555 -0.176 -0.165 0.309 6.052 -12.724 0.720 17 E_DG3:DC5_F E 3 ? F 5 ? 19 1 1 E DC 4 1_555 F DI 4 1_555 -0.294 -0.460 0.192 -0.947 -11.030 3.518 18 E_DC4:DI4_F E 4 ? F 4 ? 29 1 1 E DC 5 1_555 F DG 3 1_555 0.209 -0.108 0.122 -1.686 -5.733 1.501 19 E_DC5:DG3_F E 5 ? F 3 ? 19 1 1 E DG 6 1_555 F DC 2 1_555 -0.213 -0.147 0.390 -1.429 -3.345 -0.056 20 E_DG6:DC2_F E 6 ? F 2 ? 19 1 1 E DT 7 1_555 F DA 1 1_555 -0.178 -0.109 0.192 -0.742 -5.660 -1.665 21 E_DT7:DA1_F E 7 ? F 1 ? 20 1 1 H DA 1 1_555 G DT 7 1_555 0.026 -0.170 -0.069 -0.292 -9.024 2.507 22 H_DA1:DT7_G H 1 ? G 7 ? 20 1 1 H DC 2 1_555 G DG 6 1_555 0.193 -0.128 0.125 1.454 -3.836 1.386 23 H_DC2:DG6_G H 2 ? G 6 ? 19 1 1 H DG 3 1_555 G DC 5 1_555 -0.108 -0.210 -0.113 1.104 -1.476 1.871 24 H_DG3:DC5_G H 3 ? G 5 ? 19 1 1 H DI 4 1_555 G DC 4 1_555 0.483 -0.117 0.278 -0.104 -6.040 13.487 25 H_DI4:DC4_G H 4 ? G 4 ? 29 1 1 H DC 5 1_555 G DG 3 1_555 -0.079 -0.167 0.041 0.162 -3.317 -0.767 26 H_DC5:DG3_G H 5 ? G 3 ? 19 1 1 H DG 6 1_555 G DC 2 1_555 -0.190 -0.160 0.217 -0.204 -3.884 -0.368 27 H_DG6:DC2_G H 6 ? G 2 ? 19 1 1 H DT 7 1_555 G DA 1 1_555 -0.118 -0.097 0.459 -2.281 -6.903 0.544 28 H_DT7:DA1_G H 7 ? G 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 B DT 7 1_555 A DC 2 1_555 B DG 6 1_555 -0.641 -0.529 3.405 -1.089 -3.301 34.860 -0.357 0.893 3.457 -5.493 1.812 35.027 1 AA_DA1DC2:DG6DT7_BB A 1 ? B 7 ? A 2 ? B 6 ? 1 A DC 2 1_555 B DG 6 1_555 A DG 3 1_555 B DC 5 1_555 0.055 0.725 3.440 -0.931 3.644 34.529 0.623 -0.243 3.494 6.117 1.562 34.727 2 AA_DC2DG3:DC5DG6_BB A 2 ? B 6 ? A 3 ? B 5 ? 1 A DG 3 1_555 B DC 5 1_555 A DC 4 1_555 B DI 4 1_555 -0.227 -0.228 3.201 -2.712 3.100 28.466 -1.140 -0.138 3.166 6.262 5.478 28.756 3 AA_DG3DC4:DI4DC5_BB A 3 ? B 5 ? A 4 ? B 4 ? 1 A DC 4 1_555 B DI 4 1_555 A DC 5 1_555 B DG 3 1_555 0.099 -0.216 3.247 1.232 4.141 38.277 -0.835 0.000 3.208 6.291 -1.872 38.511 4 AA_DC4DC5:DG3DI4_BB A 4 ? B 4 ? A 5 ? B 3 ? 1 A DC 5 1_555 B DG 3 1_555 A DG 6 1_555 B DC 2 1_555 0.306 0.624 3.229 -0.474 7.230 34.928 -0.036 -0.568 3.285 11.888 0.779 35.648 5 AA_DC5DG6:DC2DG3_BB A 5 ? B 3 ? A 6 ? B 2 ? 1 A DG 6 1_555 B DC 2 1_555 A DT 7 1_555 B DA 1 1_555 0.323 -0.624 3.327 4.926 -2.528 34.433 -0.646 0.231 3.375 -4.236 -8.254 34.862 6 AA_DG6DT7:DA1DC2_BB A 6 ? B 2 ? A 7 ? B 1 ? 1 A DT 7 1_555 B DA 1 1_555 D DA 1 1_555 C DT 7 1_555 0.318 0.975 3.706 -1.532 -11.350 -28.686 0.807 0.241 3.819 21.841 -2.949 -30.843 7 AD_DT7DA1:DT7DA1_CB A 7 ? B 1 ? D 1 ? C 7 ? 1 D DA 1 1_555 C DT 7 1_555 D DC 2 1_555 C DG 6 1_555 -0.510 -0.566 3.388 -2.823 -0.045 35.137 -0.928 0.405 3.418 -0.075 4.667 35.246 8 DD_DA1DC2:DG6DT7_CC D 1 ? C 7 ? D 2 ? C 6 ? 1 D DC 2 1_555 C DG 6 1_555 D DG 3 1_555 C DC 5 1_555 0.095 0.681 3.217 3.776 7.605 33.500 -0.041 0.429 3.279 12.937 -6.424 34.529 9 DD_DC2DG3:DC5DG6_CC D 2 ? C 6 ? D 3 ? C 5 ? 1 D DG 3 1_555 C DC 5 1_555 D DI 4 1_555 C DC 4 1_555 -0.138 -0.163 3.320 -3.499 5.976 38.061 -0.992 -0.228 3.258 9.072 5.312 38.663 10 DD_DG3DI4:DC4DC5_CC D 3 ? C 5 ? D 4 ? C 4 ? 1 D DI 4 1_555 C DC 4 1_555 D DC 5 1_555 C DG 3 1_555 0.291 -0.103 3.310 3.140 2.349 31.464 -0.627 0.053 3.307 4.310 -5.762 31.702 11 DD_DI4DC5:DG3DC4_CC D 4 ? C 4 ? D 5 ? C 3 ? 1 D DC 5 1_555 C DG 3 1_555 D DG 6 1_555 C DC 2 1_555 -0.088 0.584 3.412 -0.096 4.602 34.263 0.232 0.132 3.459 7.767 0.163 34.561 12 DD_DC5DG6:DC2DG3_CC D 5 ? C 3 ? D 6 ? C 2 ? 1 D DG 6 1_555 C DC 2 1_555 D DT 7 1_555 C DA 1 1_555 0.660 -0.616 3.279 2.852 -0.954 35.247 -0.871 -0.660 3.335 -1.572 -4.699 35.371 13 DD_DG6DT7:DA1DC2_CC D 6 ? C 2 ? D 7 ? C 1 ? 1 E DA 1 1_555 F DT 7 1_555 E DC 2 1_555 F DG 6 1_555 -0.096 -0.706 3.310 -1.920 -0.698 29.925 -1.218 -0.216 3.325 -1.349 3.712 29.993 14 EE_DA1DC2:DG6DT7_FF E 1 ? F 7 ? E 2 ? F 6 ? 1 E DC 2 1_555 F DG 6 1_555 E DG 3 1_555 F DC 5 1_555 -0.266 0.346 3.330 -2.435 5.277 33.046 -0.293 0.050 3.354 9.188 4.240 33.539 15 EE_DC2DG3:DC5DG6_FF E 2 ? F 6 ? E 3 ? F 5 ? 1 E DG 3 1_555 F DC 5 1_555 E DC 4 1_555 F DI 4 1_555 -0.379 -0.621 3.368 -0.215 1.551 32.492 -1.386 0.638 3.338 2.771 0.384 32.529 16 EE_DG3DC4:DI4DC5_FF E 3 ? F 5 ? E 4 ? F 4 ? 1 E DC 4 1_555 F DI 4 1_555 E DC 5 1_555 F DG 3 1_555 0.679 -0.248 3.188 2.526 3.771 39.678 -0.788 -0.710 3.187 5.534 -3.706 39.926 17 EE_DC4DC5:DG3DI4_FF E 4 ? F 4 ? E 5 ? F 3 ? 1 E DC 5 1_555 F DG 3 1_555 E DG 6 1_555 F DC 2 1_555 -0.219 0.503 3.361 -3.030 3.264 36.117 0.335 -0.086 3.398 5.241 4.865 36.382 18 EE_DC5DG6:DC2DG3_FF E 5 ? F 3 ? E 6 ? F 2 ? 1 E DG 6 1_555 F DC 2 1_555 E DT 7 1_555 F DA 1 1_555 -0.454 -0.838 3.292 0.916 0.878 30.328 -1.776 1.051 3.252 1.677 -1.749 30.354 19 EE_DG6DT7:DA1DC2_FF E 6 ? F 2 ? E 7 ? F 1 ? 1 E DT 7 1_555 F DA 1 1_555 H DA 1 1_555 G DT 7 1_555 0.204 0.909 3.620 1.156 0.185 -23.814 -2.267 0.912 3.599 -0.449 2.800 -23.842 20 EH_DT7DA1:DT7DA1_GF E 7 ? F 1 ? H 1 ? G 7 ? 1 H DA 1 1_555 G DT 7 1_555 H DC 2 1_555 G DG 6 1_555 -0.046 -0.672 3.174 -1.564 1.767 30.417 -1.617 -0.213 3.129 3.362 2.975 30.506 21 HH_DA1DC2:DG6DT7_GG H 1 ? G 7 ? H 2 ? G 6 ? 1 H DC 2 1_555 G DG 6 1_555 H DG 3 1_555 G DC 5 1_555 -0.390 0.732 3.374 -0.300 5.181 36.149 0.418 0.579 3.445 8.296 0.480 36.508 22 HH_DC2DG3:DC5DG6_GG H 2 ? G 6 ? H 3 ? G 5 ? 1 H DG 3 1_555 G DC 5 1_555 H DI 4 1_555 G DC 4 1_555 0.215 -0.214 3.250 -3.258 2.594 38.748 -0.632 -0.712 3.202 3.895 4.893 38.962 23 HH_DG3DI4:DC4DC5_GG H 3 ? G 5 ? H 4 ? G 4 ? 1 H DI 4 1_555 G DC 4 1_555 H DC 5 1_555 G DG 3 1_555 -0.122 -0.312 3.284 3.977 4.261 30.104 -1.426 1.012 3.169 8.107 -7.567 30.650 24 HH_DI4DC5:DG3DC4_GG H 4 ? G 4 ? H 5 ? G 3 ? 1 H DC 5 1_555 G DG 3 1_555 H DG 6 1_555 G DC 2 1_555 -0.042 0.419 3.440 -2.967 2.318 36.980 0.331 -0.352 3.452 3.644 4.662 37.165 25 HH_DC5DG6:DC2DG3_GG H 5 ? G 3 ? H 6 ? G 2 ? 1 H DG 6 1_555 G DC 2 1_555 H DT 7 1_555 G DA 1 1_555 -0.236 -0.763 3.376 -0.544 -1.298 30.586 -1.179 0.335 3.408 -2.459 1.031 30.617 26 HH_DG6DT7:DA1DC2_GG H 6 ? G 2 ? H 7 ? G 1 ? # _pdbx_audit_support.funding_organization 'Ministry of Science and Technology (MoST, Taiwan)' _pdbx_audit_support.country Taiwan _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6JV5 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 8WNB _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.021533 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021476 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013385 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P # loop_