HEADER VIRAL PROTEIN 18-OCT-23 8WT5 TITLE VACCINIA VIRUS J5 ECTODOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN J5; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VACCINIA VIRUS WESTERN RESERVE; SOURCE 3 ORGANISM_TAXID: 696871; SOURCE 4 GENE: MVA089L; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ENTRY FUSION COMPLEX PROTEIN, VIRAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR K.J.CARILLO,D.L.TZOU REVDAT 1 22-NOV-23 8WT5 0 JRNL AUTH K.J.CARILLO,D.L.TZOU JRNL TITL SOLUTION NMR STRUCTURE OF VACCINIA VIRUS PROTEIN J5 (2 - 68 JRNL TITL 2 A.A) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH 3.7, AMBER REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X-PLOR REMARK 3 NIH), CASE, DARDEN, CHEATHAM III, SIMMERLING, WANG, REMARK 3 DUKE, LUO, ... AND KOLLMAN (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8WT5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1300041839. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 8.1 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-100% 13C; U-100% 15N] REMARK 210 VACCINIA VIRUS PROTEIN J5, 137 REMARK 210 MM NO LABEL SODIUM CHLORIDE, 2.7 REMARK 210 MM NO LABEL POTASSIUM CHLORIDE, REMARK 210 10 MM NO LABEL DISODIUM REMARK 210 PHOSPHATE, 1.8 MM NO LABEL REMARK 210 POTASSIUM DIHYDROGEN PHOSPHATE, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-13C NOESY; REMARK 210 3D 1H-15N NOESY; 3D HBHA(CO)NH; REMARK 210 3D CBCA(CO)NH; 3D HNCA; 3D HN(CO) REMARK 210 CA; 3D HCCH-COSY; 3D HCCH-TOCSY; REMARK 210 3D HN(COCA)CB; 3D HNCO REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : BRUKER AVANCE III 600 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CARA 1.8.4, TOPSPIN 4.3.0, X REMARK 210 -PLOR NIH 3.7 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 3 PRO A 53 152.88 -48.94 REMARK 500 4 PRO A 53 151.95 -49.13 REMARK 500 5 LYS A 13 -63.80 41.37 REMARK 500 7 PRO A 37 150.05 -49.23 REMARK 500 7 PRO A 53 150.56 -49.82 REMARK 500 8 PRO A 53 153.09 -48.85 REMARK 500 9 PRO A 53 154.22 -49.67 REMARK 500 10 SER A 26 -21.76 75.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36600 RELATED DB: BMRB REMARK 900 VACCINIA VIRUS J5 ECTODOMAIN DBREF 8WT5 A 1 67 UNP Q76VD9 J5_VACCA 2 68 SEQRES 1 A 67 THR ASP GLU GLN ILE TYR ALA PHE CYS ASP ALA ASN LYS SEQRES 2 A 67 ASP ASP ILE ARG CYS LYS CYS ILE TYR PRO ASP LYS SER SEQRES 3 A 67 ILE VAL ARG ILE GLY ILE ASP THR ARG LEU PRO TYR TYR SEQRES 4 A 67 CYS TRP TYR GLU PRO CYS LYS ARG SER ASP ALA LEU LEU SEQRES 5 A 67 PRO ALA SER LEU LYS LYS ASN ILE THR LYS CYS ASN VAL SEQRES 6 A 67 SER ASP HELIX 1 AA1 THR A 1 ASN A 12 1 12 HELIX 2 AA2 ASP A 15 LYS A 19 5 5 HELIX 3 AA3 ASP A 24 ASP A 33 1 10 HELIX 4 AA4 PRO A 37 TRP A 41 5 5 HELIX 5 AA5 TYR A 42 ARG A 47 5 6 HELIX 6 AA6 PRO A 53 LYS A 62 1 10 SSBOND 1 CYS A 9 CYS A 18 1555 1555 2.04 SSBOND 2 CYS A 20 CYS A 45 1555 1555 2.03 SSBOND 3 CYS A 40 CYS A 63 1555 1555 2.04 CRYST1 58.111 48.369 42.551 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017208 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020674 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023501 0.00000 MODEL 1