HEADER IMMUNE SYSTEM 18-OCT-23 8WTA TITLE CRYO-EM STRUCTURE OF HUMAN TLR4/MD-2/DLAM3 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 4; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LYMPHOCYTE ANTIGEN 96; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TLR4; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: LY96; SOURCE 13 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS INNATE IMMUNE SYSTEM, TOLL-LIKE RECEPTORS, TLR4 AGONIST, VACCINE KEYWDS 2 ADJUVANTS, DISACCHARIDE-BASED LIPID A MIMETICES, IMMUNE SYSTEM EXPDTA ELECTRON MICROSCOPY AUTHOR Y.FU,H.KIM,A.ZAMYATINA,H.M.KIM REVDAT 3 05-FEB-25 8WTA 1 COMPND AUTHOR REMARK DBREF REVDAT 3 2 1 HELIX SHEET SSBOND LINK REVDAT 3 3 1 ATOM REVDAT 2 13-NOV-24 8WTA 1 REMARK REVDAT 1 23-OCT-24 8WTA 0 JRNL AUTH Y.FU,H.KIM JRNL TITL STRUCTURE INSIGHT ON TAILORED MODULATION OF TLR4-MEDIATED JRNL TITL 2 PRO-INFLAMMATORY RESPONSE BY DISACCHARIDE LIPID A MIMETICS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 3FXI REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.900 REMARK 3 NUMBER OF PARTICLES : 302687 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8WTA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1300041940. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : HUMAN TLR4/MD2/DLAM3 COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : 10MA REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 2071 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2100.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4010.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 628 REMARK 465 MET A 629 REMARK 465 ASN A 630 REMARK 465 LYS A 631 REMARK 465 SER C 159 REMARK 465 ASN C 160 REMARK 465 GLN B 628 REMARK 465 MET B 629 REMARK 465 ASN B 630 REMARK 465 LYS B 631 REMARK 465 SER D 159 REMARK 465 ASN D 160 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N LYS D 122 O2 2IL D 202 1.60 REMARK 500 N LYS C 122 O2 2IL C 202 1.60 REMARK 500 O3 GP4 A 701 C1E 0IL C 203 1.63 REMARK 500 O3 GP4 B 701 C1E 0IL D 203 1.63 REMARK 500 O4 NAG F 2 O5 BMA F 3 1.86 REMARK 500 O4 NAG J 2 O5 BMA J 3 1.86 REMARK 500 O4 NAG G 1 O5 NAG G 2 2.08 REMARK 500 O4 NAG H 1 O5 NAG H 2 2.08 REMARK 500 O4 NAG J 1 O5 NAG J 2 2.15 REMARK 500 O4 NAG F 1 O5 NAG F 2 2.15 REMARK 500 N2 GP4 B 701 O2 2IL D 205 2.18 REMARK 500 N2 GP4 A 701 O2 2IL C 205 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 36 -51.96 -127.20 REMARK 500 CYS A 40 112.39 -160.00 REMARK 500 GLU A 42 -2.68 68.66 REMARK 500 ASN A 58 56.86 34.06 REMARK 500 PHE A 77 76.27 -118.63 REMARK 500 GLU A 89 108.43 -59.12 REMARK 500 TYR A 98 19.09 56.83 REMARK 500 LEU A 101 117.19 -161.55 REMARK 500 LEU A 109 57.97 -98.76 REMARK 500 GLU A 135 -1.19 69.15 REMARK 500 PHE A 165 54.79 -90.73 REMARK 500 PRO A 168 -177.92 -66.35 REMARK 500 LYS A 186 56.01 -96.26 REMARK 500 LEU A 198 -6.29 75.62 REMARK 500 GLN A 200 52.53 -92.89 REMARK 500 LEU A 210 116.71 -161.56 REMARK 500 GLU A 266 -163.84 -118.66 REMARK 500 LEU A 277 -1.89 66.78 REMARK 500 ASP A 302 -7.67 72.35 REMARK 500 LEU A 307 48.42 -88.78 REMARK 500 SER A 360 15.18 56.86 REMARK 500 GLU A 422 1.43 -66.08 REMARK 500 PHE A 429 11.28 -140.99 REMARK 500 PHE A 467 51.54 -92.22 REMARK 500 GLU A 485 12.30 58.50 REMARK 500 GLU A 494 -5.06 73.89 REMARK 500 GLN A 505 -0.03 62.65 REMARK 500 TYR A 540 31.39 -96.41 REMARK 500 SER A 552 -65.36 -103.07 REMARK 500 LEU A 553 51.75 -98.70 REMARK 500 LYS A 561 -169.13 -167.89 REMARK 500 LEU A 576 29.29 -141.56 REMARK 500 VAL A 602 -63.68 -122.43 REMARK 500 VAL C 24 -63.42 -122.56 REMARK 500 GLN C 73 54.20 37.42 REMARK 500 HIS C 155 115.74 -161.37 REMARK 500 ILE B 36 -51.96 -127.24 REMARK 500 CYS B 40 112.39 -160.03 REMARK 500 GLU B 42 -2.68 68.65 REMARK 500 ASN B 58 56.88 34.09 REMARK 500 PHE B 77 76.25 -118.59 REMARK 500 GLU B 89 108.42 -59.17 REMARK 500 TYR B 98 19.04 56.85 REMARK 500 LEU B 101 117.18 -161.56 REMARK 500 LEU B 109 57.98 -98.78 REMARK 500 GLU B 135 -1.22 69.17 REMARK 500 PHE B 165 54.79 -90.72 REMARK 500 PRO B 168 -177.95 -66.39 REMARK 500 LYS B 186 55.96 -96.19 REMARK 500 LEU B 198 -6.25 75.55 REMARK 500 REMARK 500 THIS ENTRY HAS 71 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG C 90 0.13 SIDE CHAIN REMARK 500 ARG D 90 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 0IL C 203 REMARK 610 0IL D 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-37831 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF HUMAN TLR4/MD-2/DLAM3 COMPLEX REMARK 900 RELATED ID: 8WO1 RELATED DB: PDB REMARK 900 HTLR4/MD-2/DLAM5 COMPLEX REMARK 900 RELATED ID: 9J03 RELATED DB: PDB REMARK 900 HTLR4/MD-2/DLAM1 COMPLEX REMARK 900 RELATED ID: 8WSA RELATED DB: PDB REMARK 900 MTLR4/MD-2/DLAM5 COMPLEX REMARK 900 RELATED ID: 8WRY RELATED DB: PDB REMARK 900 MTLR4/MD-2/DLAM3 COMPLEX REMARK 900 RELATED ID: 8WQT RELATED DB: PDB REMARK 900 MTLR4/MD-2/DLAM1 COMPLEX DBREF 8WTA A 27 631 UNP O00206 TLR4_HUMAN 27 631 DBREF 8WTA C 19 160 UNP B3Y6A6 B3Y6A6_PANTR 19 160 DBREF 8WTA B 27 631 UNP O00206 TLR4_HUMAN 27 631 DBREF 8WTA D 19 160 UNP B3Y6A6 B3Y6A6_PANTR 19 160 SEQRES 1 A 605 GLU PRO CYS VAL GLU VAL VAL PRO ASN ILE THR TYR GLN SEQRES 2 A 605 CYS MET GLU LEU ASN PHE TYR LYS ILE PRO ASP ASN LEU SEQRES 3 A 605 PRO PHE SER THR LYS ASN LEU ASP LEU SER PHE ASN PRO SEQRES 4 A 605 LEU ARG HIS LEU GLY SER TYR SER PHE PHE SER PHE PRO SEQRES 5 A 605 GLU LEU GLN VAL LEU ASP LEU SER ARG CYS GLU ILE GLN SEQRES 6 A 605 THR ILE GLU ASP GLY ALA TYR GLN SER LEU SER HIS LEU SEQRES 7 A 605 SER THR LEU ILE LEU THR GLY ASN PRO ILE GLN SER LEU SEQRES 8 A 605 ALA LEU GLY ALA PHE SER GLY LEU SER SER LEU GLN LYS SEQRES 9 A 605 LEU VAL ALA VAL GLU THR ASN LEU ALA SER LEU GLU ASN SEQRES 10 A 605 PHE PRO ILE GLY HIS LEU LYS THR LEU LYS GLU LEU ASN SEQRES 11 A 605 VAL ALA HIS ASN LEU ILE GLN SER PHE LYS LEU PRO GLU SEQRES 12 A 605 TYR PHE SER ASN LEU THR ASN LEU GLU HIS LEU ASP LEU SEQRES 13 A 605 SER SER ASN LYS ILE GLN SER ILE TYR CYS THR ASP LEU SEQRES 14 A 605 ARG VAL LEU HIS GLN MET PRO LEU LEU ASN LEU SER LEU SEQRES 15 A 605 ASP LEU SER LEU ASN PRO MET ASN PHE ILE GLN PRO GLY SEQRES 16 A 605 ALA PHE LYS GLU ILE ARG LEU HIS LYS LEU THR LEU ARG SEQRES 17 A 605 ASN ASN PHE ASP SER LEU ASN VAL MET LYS THR CYS ILE SEQRES 18 A 605 GLN GLY LEU ALA GLY LEU GLU VAL HIS ARG LEU VAL LEU SEQRES 19 A 605 GLY GLU PHE ARG ASN GLU GLY ASN LEU GLU LYS PHE ASP SEQRES 20 A 605 LYS SER ALA LEU GLU GLY LEU CYS ASN LEU THR ILE GLU SEQRES 21 A 605 GLU PHE ARG LEU ALA TYR LEU ASP TYR TYR LEU ASP ASP SEQRES 22 A 605 ILE ILE ASP LEU PHE ASN CYS LEU THR ASN VAL SER SER SEQRES 23 A 605 PHE SER LEU VAL SER VAL THR ILE GLU ARG VAL LYS ASP SEQRES 24 A 605 PHE SER TYR ASN PHE GLY TRP GLN HIS LEU GLU LEU VAL SEQRES 25 A 605 ASN CYS LYS PHE GLY GLN PHE PRO THR LEU LYS LEU LYS SEQRES 26 A 605 SER LEU LYS ARG LEU THR PHE THR SER ASN LYS GLY GLY SEQRES 27 A 605 ASN ALA PHE SER GLU VAL ASP LEU PRO SER LEU GLU PHE SEQRES 28 A 605 LEU ASP LEU SER ARG ASN GLY LEU SER PHE LYS GLY CYS SEQRES 29 A 605 CYS SER GLN SER ASP PHE GLY THR THR SER LEU LYS TYR SEQRES 30 A 605 LEU ASP LEU SER PHE ASN GLY VAL ILE THR MET SER SER SEQRES 31 A 605 ASN PHE LEU GLY LEU GLU GLN LEU GLU HIS LEU ASP PHE SEQRES 32 A 605 GLN HIS SER ASN LEU LYS GLN MET SER GLU PHE SER VAL SEQRES 33 A 605 PHE LEU SER LEU ARG ASN LEU ILE TYR LEU ASP ILE SER SEQRES 34 A 605 HIS THR HIS THR ARG VAL ALA PHE ASN GLY ILE PHE ASN SEQRES 35 A 605 GLY LEU SER SER LEU GLU VAL LEU LYS MET ALA GLY ASN SEQRES 36 A 605 SER PHE GLN GLU ASN PHE LEU PRO ASP ILE PHE THR GLU SEQRES 37 A 605 LEU ARG ASN LEU THR PHE LEU ASP LEU SER GLN CYS GLN SEQRES 38 A 605 LEU GLU GLN LEU SER PRO THR ALA PHE ASN SER LEU SER SEQRES 39 A 605 SER LEU GLN VAL LEU ASN MET SER HIS ASN ASN PHE PHE SEQRES 40 A 605 SER LEU ASP THR PHE PRO TYR LYS CYS LEU ASN SER LEU SEQRES 41 A 605 GLN VAL LEU ASP TYR SER LEU ASN HIS ILE MET THR SER SEQRES 42 A 605 LYS LYS GLN GLU LEU GLN HIS PHE PRO SER SER LEU ALA SEQRES 43 A 605 PHE LEU ASN LEU THR GLN ASN ASP PHE ALA CYS THR CYS SEQRES 44 A 605 GLU HIS GLN SER PHE LEU GLN TRP ILE LYS ASP GLN ARG SEQRES 45 A 605 GLN LEU LEU VAL GLU VAL GLU ARG MET GLU CYS ALA THR SEQRES 46 A 605 PRO SER ASP LYS GLN GLY MET PRO VAL LEU SER LEU ASN SEQRES 47 A 605 ILE THR CYS GLN MET ASN LYS SEQRES 1 C 142 GLN LYS GLN TYR TRP VAL CYS ASN SER SER ASP ALA SER SEQRES 2 C 142 ILE SER TYR THR TYR CYS ASP LYS MET GLN TYR PRO ILE SEQRES 3 C 142 SER ILE ASN VAL ASN PRO CYS ILE GLU LEU LYS GLY SER SEQRES 4 C 142 LYS GLY LEU LEU HIS ILE PHE TYR ILE PRO ARG ARG ASP SEQRES 5 C 142 LEU LYS GLN LEU TYR PHE ASN LEU TYR ILE THR VAL ASN SEQRES 6 C 142 THR MET ASN LEU PRO LYS ARG LYS GLU VAL ILE CYS ARG SEQRES 7 C 142 GLY SER ASP ASP ASP TYR SER PHE CYS ARG ALA LEU LYS SEQRES 8 C 142 GLY GLU THR VAL ASN THR THR ILE SER PHE SER PHE LYS SEQRES 9 C 142 GLY ILE LYS PHE SER LYS GLY LYS TYR LYS CYS VAL VAL SEQRES 10 C 142 GLU ALA ILE SER GLY SER PRO GLU GLU MET LEU PHE CYS SEQRES 11 C 142 LEU GLU PHE VAL ILE LEU HIS GLN PRO ASN SER ASN SEQRES 1 B 605 GLU PRO CYS VAL GLU VAL VAL PRO ASN ILE THR TYR GLN SEQRES 2 B 605 CYS MET GLU LEU ASN PHE TYR LYS ILE PRO ASP ASN LEU SEQRES 3 B 605 PRO PHE SER THR LYS ASN LEU ASP LEU SER PHE ASN PRO SEQRES 4 B 605 LEU ARG HIS LEU GLY SER TYR SER PHE PHE SER PHE PRO SEQRES 5 B 605 GLU LEU GLN VAL LEU ASP LEU SER ARG CYS GLU ILE GLN SEQRES 6 B 605 THR ILE GLU ASP GLY ALA TYR GLN SER LEU SER HIS LEU SEQRES 7 B 605 SER THR LEU ILE LEU THR GLY ASN PRO ILE GLN SER LEU SEQRES 8 B 605 ALA LEU GLY ALA PHE SER GLY LEU SER SER LEU GLN LYS SEQRES 9 B 605 LEU VAL ALA VAL GLU THR ASN LEU ALA SER LEU GLU ASN SEQRES 10 B 605 PHE PRO ILE GLY HIS LEU LYS THR LEU LYS GLU LEU ASN SEQRES 11 B 605 VAL ALA HIS ASN LEU ILE GLN SER PHE LYS LEU PRO GLU SEQRES 12 B 605 TYR PHE SER ASN LEU THR ASN LEU GLU HIS LEU ASP LEU SEQRES 13 B 605 SER SER ASN LYS ILE GLN SER ILE TYR CYS THR ASP LEU SEQRES 14 B 605 ARG VAL LEU HIS GLN MET PRO LEU LEU ASN LEU SER LEU SEQRES 15 B 605 ASP LEU SER LEU ASN PRO MET ASN PHE ILE GLN PRO GLY SEQRES 16 B 605 ALA PHE LYS GLU ILE ARG LEU HIS LYS LEU THR LEU ARG SEQRES 17 B 605 ASN ASN PHE ASP SER LEU ASN VAL MET LYS THR CYS ILE SEQRES 18 B 605 GLN GLY LEU ALA GLY LEU GLU VAL HIS ARG LEU VAL LEU SEQRES 19 B 605 GLY GLU PHE ARG ASN GLU GLY ASN LEU GLU LYS PHE ASP SEQRES 20 B 605 LYS SER ALA LEU GLU GLY LEU CYS ASN LEU THR ILE GLU SEQRES 21 B 605 GLU PHE ARG LEU ALA TYR LEU ASP TYR TYR LEU ASP ASP SEQRES 22 B 605 ILE ILE ASP LEU PHE ASN CYS LEU THR ASN VAL SER SER SEQRES 23 B 605 PHE SER LEU VAL SER VAL THR ILE GLU ARG VAL LYS ASP SEQRES 24 B 605 PHE SER TYR ASN PHE GLY TRP GLN HIS LEU GLU LEU VAL SEQRES 25 B 605 ASN CYS LYS PHE GLY GLN PHE PRO THR LEU LYS LEU LYS SEQRES 26 B 605 SER LEU LYS ARG LEU THR PHE THR SER ASN LYS GLY GLY SEQRES 27 B 605 ASN ALA PHE SER GLU VAL ASP LEU PRO SER LEU GLU PHE SEQRES 28 B 605 LEU ASP LEU SER ARG ASN GLY LEU SER PHE LYS GLY CYS SEQRES 29 B 605 CYS SER GLN SER ASP PHE GLY THR THR SER LEU LYS TYR SEQRES 30 B 605 LEU ASP LEU SER PHE ASN GLY VAL ILE THR MET SER SER SEQRES 31 B 605 ASN PHE LEU GLY LEU GLU GLN LEU GLU HIS LEU ASP PHE SEQRES 32 B 605 GLN HIS SER ASN LEU LYS GLN MET SER GLU PHE SER VAL SEQRES 33 B 605 PHE LEU SER LEU ARG ASN LEU ILE TYR LEU ASP ILE SER SEQRES 34 B 605 HIS THR HIS THR ARG VAL ALA PHE ASN GLY ILE PHE ASN SEQRES 35 B 605 GLY LEU SER SER LEU GLU VAL LEU LYS MET ALA GLY ASN SEQRES 36 B 605 SER PHE GLN GLU ASN PHE LEU PRO ASP ILE PHE THR GLU SEQRES 37 B 605 LEU ARG ASN LEU THR PHE LEU ASP LEU SER GLN CYS GLN SEQRES 38 B 605 LEU GLU GLN LEU SER PRO THR ALA PHE ASN SER LEU SER SEQRES 39 B 605 SER LEU GLN VAL LEU ASN MET SER HIS ASN ASN PHE PHE SEQRES 40 B 605 SER LEU ASP THR PHE PRO TYR LYS CYS LEU ASN SER LEU SEQRES 41 B 605 GLN VAL LEU ASP TYR SER LEU ASN HIS ILE MET THR SER SEQRES 42 B 605 LYS LYS GLN GLU LEU GLN HIS PHE PRO SER SER LEU ALA SEQRES 43 B 605 PHE LEU ASN LEU THR GLN ASN ASP PHE ALA CYS THR CYS SEQRES 44 B 605 GLU HIS GLN SER PHE LEU GLN TRP ILE LYS ASP GLN ARG SEQRES 45 B 605 GLN LEU LEU VAL GLU VAL GLU ARG MET GLU CYS ALA THR SEQRES 46 B 605 PRO SER ASP LYS GLN GLY MET PRO VAL LEU SER LEU ASN SEQRES 47 B 605 ILE THR CYS GLN MET ASN LYS SEQRES 1 D 142 GLN LYS GLN TYR TRP VAL CYS ASN SER SER ASP ALA SER SEQRES 2 D 142 ILE SER TYR THR TYR CYS ASP LYS MET GLN TYR PRO ILE SEQRES 3 D 142 SER ILE ASN VAL ASN PRO CYS ILE GLU LEU LYS GLY SER SEQRES 4 D 142 LYS GLY LEU LEU HIS ILE PHE TYR ILE PRO ARG ARG ASP SEQRES 5 D 142 LEU LYS GLN LEU TYR PHE ASN LEU TYR ILE THR VAL ASN SEQRES 6 D 142 THR MET ASN LEU PRO LYS ARG LYS GLU VAL ILE CYS ARG SEQRES 7 D 142 GLY SER ASP ASP ASP TYR SER PHE CYS ARG ALA LEU LYS SEQRES 8 D 142 GLY GLU THR VAL ASN THR THR ILE SER PHE SER PHE LYS SEQRES 9 D 142 GLY ILE LYS PHE SER LYS GLY LYS TYR LYS CYS VAL VAL SEQRES 10 D 142 GLU ALA ILE SER GLY SER PRO GLU GLU MET LEU PHE CYS SEQRES 11 D 142 LEU GLU PHE VAL ILE LEU HIS GLN PRO ASN SER ASN HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET NAG I 1 14 HET NAG I 2 14 HET BMA I 3 11 HET NAG J 1 14 HET NAG J 2 14 HET BMA J 3 11 HET GP4 A 701 15 HET NAG A 702 14 HET NAG A 703 14 HET NAG C 201 14 HET 2IL C 202 29 HET 0IL C 203 31 HET XIQ C 204 13 HET 2IL C 205 29 HET GP4 B 701 15 HET NAG B 702 14 HET NAG B 703 14 HET NAG D 201 14 HET 2IL D 202 29 HET 0IL D 203 31 HET XIQ D 204 13 HET 2IL D 205 29 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM GP4 2-AMINO-2-DEOXY-4-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE HETNAM 2IL (3R)-3-(DODECANOYLOXY)TETRADECANOIC ACID HETNAM 0IL (3R)-3-(TETRADECANOYLOXY)TETRADECANOIC ACID HETNAM XIQ 2-(HYDROXYMETHYL)-5-METHOXY-3,6-BIS(OXIDANYL)PYRAN-4- HETNAM 2 XIQ ONE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GP4 GLUCOSAMINE 4-PHOSPHATE; N-ACETYL-4-O-PHOSPHONO-ALPHA- HETSYN 2 GP4 D-GLUCOSAMINE; 2-AMINO-2-DEOXY-4-O-PHOSPHONO-ALPHA-D- HETSYN 3 GP4 GLUCOSE; 2-AMINO-2-DEOXY-4-O-PHOSPHONO-D-GLUCOSE; 2- HETSYN 4 GP4 AMINO-2-DEOXY-4-O-PHOSPHONO-GLUCOSE FORMUL 5 NAG 18(C8 H15 N O6) FORMUL 5 BMA 4(C6 H12 O6) FORMUL 11 GP4 2(C6 H14 N O8 P) FORMUL 15 2IL 4(C26 H50 O4) FORMUL 16 0IL 2(C28 H54 O4) FORMUL 17 XIQ 2(C7 H8 O6) HELIX 1 AA1 SER A 239 LEU A 250 1 12 HELIX 2 AA2 GLY A 279 LEU A 283 5 5 HELIX 3 AA3 GLU A 485 PHE A 487 5 3 HELIX 4 AA4 HIS A 587 ASP A 596 1 10 HELIX 5 AA5 GLU A 603 ARG A 606 5 4 HELIX 6 AA6 SER C 103 ALA C 107 5 5 HELIX 7 AA7 SER B 239 LEU B 250 1 12 HELIX 8 AA8 GLY B 279 LEU B 283 5 5 HELIX 9 AA9 GLU B 485 PHE B 487 5 3 HELIX 10 AB1 HIS B 587 ASP B 596 1 10 HELIX 11 AB2 GLU B 603 ARG B 606 5 4 HELIX 12 AB3 SER D 103 ALA D 107 5 5 SHEET 1 AA1 2 GLU A 31 VAL A 33 0 SHEET 2 AA1 2 THR A 37 TYR A 38 -1 O THR A 37 N VAL A 33 SHEET 1 AA2 2 THR A 92 ILE A 93 0 SHEET 2 AA2 2 SER A 116 LEU A 117 1 O SER A 116 N ILE A 93 SHEET 1 AA3 2 THR A 106 ILE A 108 0 SHEET 2 AA3 2 LYS A 130 VAL A 132 1 O VAL A 132 N LEU A 107 SHEET 1 AA4 2 HIS A 179 ASP A 181 0 SHEET 2 AA4 2 SER A 207 ASP A 209 1 O ASP A 209 N LEU A 180 SHEET 1 AA5 2 SER A 189 ILE A 190 0 SHEET 2 AA5 2 PHE A 217 ILE A 218 1 O PHE A 217 N ILE A 190 SHEET 1 AA6 6 LEU A 231 ARG A 234 0 SHEET 2 AA6 6 LEU A 258 GLY A 261 1 O VAL A 259 N LEU A 233 SHEET 3 AA6 6 PHE A 288 ALA A 291 1 O ARG A 289 N LEU A 260 SHEET 4 AA6 6 PHE A 313 VAL A 316 1 O VAL A 316 N LEU A 290 SHEET 5 AA6 6 LEU A 335 VAL A 338 1 O VAL A 338 N LEU A 315 SHEET 6 AA6 6 LEU A 356 THR A 359 1 O THR A 357 N LEU A 337 SHEET 1 AA7 2 ARG A 460 VAL A 461 0 SHEET 2 AA7 2 SER A 482 PHE A 483 1 O SER A 482 N VAL A 461 SHEET 1 AA8 3 VAL A 475 LYS A 477 0 SHEET 2 AA8 3 PHE A 500 ASP A 502 1 O ASP A 502 N LEU A 476 SHEET 3 AA8 3 VAL A 524 ASN A 526 1 O ASN A 526 N LEU A 501 SHEET 1 AA9 2 VAL A 548 ASP A 550 0 SHEET 2 AA9 2 PHE A 573 ASN A 575 1 O ASN A 575 N LEU A 549 SHEET 1 AB1 2 GLU A 608 CYS A 609 0 SHEET 2 AB1 2 MET A 618 PRO A 619 -1 O MET A 618 N CYS A 609 SHEET 1 AB2 6 TYR C 22 TRP C 23 0 SHEET 2 AB2 6 SER C 33 TYR C 36 -1 O TYR C 34 N TYR C 22 SHEET 3 AB2 6 GLU C 144 VAL C 152 -1 O GLU C 150 N THR C 35 SHEET 4 AB2 6 LYS C 132 SER C 139 -1 N SER C 139 O GLU C 144 SHEET 5 AB2 6 TYR C 75 VAL C 82 -1 N TYR C 75 O ILE C 138 SHEET 6 AB2 6 MET C 85 VAL C 93 -1 O MET C 85 N VAL C 82 SHEET 1 AB3 3 SER C 45 ASN C 49 0 SHEET 2 AB3 3 LYS C 58 TYR C 65 -1 O LEU C 60 N ASN C 49 SHEET 3 AB3 3 VAL C 113 SER C 120 -1 O THR C 115 N ILE C 63 SHEET 1 AB4 2 GLU B 31 VAL B 33 0 SHEET 2 AB4 2 THR B 37 TYR B 38 -1 O THR B 37 N VAL B 33 SHEET 1 AB5 2 THR B 92 ILE B 93 0 SHEET 2 AB5 2 SER B 116 LEU B 117 1 O SER B 116 N ILE B 93 SHEET 1 AB6 2 THR B 106 ILE B 108 0 SHEET 2 AB6 2 LYS B 130 VAL B 132 1 O VAL B 132 N LEU B 107 SHEET 1 AB7 2 HIS B 179 ASP B 181 0 SHEET 2 AB7 2 SER B 207 ASP B 209 1 O ASP B 209 N LEU B 180 SHEET 1 AB8 2 SER B 189 ILE B 190 0 SHEET 2 AB8 2 PHE B 217 ILE B 218 1 O PHE B 217 N ILE B 190 SHEET 1 AB9 6 LEU B 231 ARG B 234 0 SHEET 2 AB9 6 LEU B 258 GLY B 261 1 O VAL B 259 N LEU B 233 SHEET 3 AB9 6 PHE B 288 ALA B 291 1 O ARG B 289 N LEU B 260 SHEET 4 AB9 6 PHE B 313 VAL B 316 1 O VAL B 316 N LEU B 290 SHEET 5 AB9 6 LEU B 335 VAL B 338 1 O VAL B 338 N LEU B 315 SHEET 6 AB9 6 LEU B 356 THR B 359 1 O THR B 357 N LEU B 337 SHEET 1 AC1 2 ARG B 460 VAL B 461 0 SHEET 2 AC1 2 SER B 482 PHE B 483 1 O SER B 482 N VAL B 461 SHEET 1 AC2 3 VAL B 475 LYS B 477 0 SHEET 2 AC2 3 PHE B 500 ASP B 502 1 O ASP B 502 N LEU B 476 SHEET 3 AC2 3 VAL B 524 ASN B 526 1 O ASN B 526 N LEU B 501 SHEET 1 AC3 2 VAL B 548 ASP B 550 0 SHEET 2 AC3 2 PHE B 573 ASN B 575 1 O ASN B 575 N LEU B 549 SHEET 1 AC4 2 GLU B 608 CYS B 609 0 SHEET 2 AC4 2 MET B 618 PRO B 619 -1 O MET B 618 N CYS B 609 SHEET 1 AC5 6 TYR D 22 TRP D 23 0 SHEET 2 AC5 6 SER D 33 TYR D 36 -1 O TYR D 34 N TYR D 22 SHEET 3 AC5 6 GLU D 144 VAL D 152 -1 O GLU D 150 N THR D 35 SHEET 4 AC5 6 LYS D 132 SER D 139 -1 N SER D 139 O GLU D 144 SHEET 5 AC5 6 TYR D 75 VAL D 82 -1 N TYR D 75 O ILE D 138 SHEET 6 AC5 6 MET D 85 VAL D 93 -1 O MET D 85 N VAL D 82 SHEET 1 AC6 3 SER D 45 ASN D 49 0 SHEET 2 AC6 3 LYS D 58 TYR D 65 -1 O LEU D 60 N ASN D 49 SHEET 3 AC6 3 VAL D 113 SER D 120 -1 O THR D 115 N ILE D 63 SSBOND 1 CYS A 29 CYS A 40 1555 1555 2.04 SSBOND 2 CYS A 281 CYS A 306 1555 1555 2.03 SSBOND 3 CYS A 390 CYS A 391 1555 1555 2.04 SSBOND 4 CYS A 583 CYS A 609 1555 1555 2.03 SSBOND 5 CYS A 585 CYS A 627 1555 1555 2.03 SSBOND 6 CYS C 25 CYS C 51 1555 1555 2.04 SSBOND 7 CYS C 37 CYS C 148 1555 1555 1.85 SSBOND 8 CYS C 95 CYS C 105 1555 1555 2.04 SSBOND 9 CYS B 29 CYS B 40 1555 1555 2.04 SSBOND 10 CYS B 281 CYS B 306 1555 1555 2.03 SSBOND 11 CYS B 390 CYS B 391 1555 1555 2.04 SSBOND 12 CYS B 583 CYS B 609 1555 1555 2.03 SSBOND 13 CYS B 585 CYS B 627 1555 1555 2.03 SSBOND 14 CYS D 25 CYS D 51 1555 1555 2.04 SSBOND 15 CYS D 37 CYS D 148 1555 1555 1.85 SSBOND 16 CYS D 95 CYS D 105 1555 1555 2.04 LINK ND2 ASN A 205 C1 NAG A 702 1555 1555 1.44 LINK ND2 ASN A 497 C1 NAG A 703 1555 1555 1.44 LINK ND2 ASN A 526 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 575 C1 NAG F 1 1555 1555 1.43 LINK C1 GP4 A 701 OXT XIQ C 204 1555 1555 1.44 LINK N2 GP4 A 701 C1 2IL C 205 1555 1555 1.29 LINK ND2 ASN C 26 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN C 114 C1 NAG C 201 1555 1555 1.44 LINK C1 2IL C 202 O4 XIQ C 204 1555 1555 1.28 LINK ND2 ASN B 205 C1 NAG B 702 1555 1555 1.44 LINK ND2 ASN B 497 C1 NAG B 703 1555 1555 1.44 LINK ND2 ASN B 526 C1 NAG I 1 1555 1555 1.44 LINK ND2 ASN B 575 C1 NAG J 1 1555 1555 1.43 LINK C1 GP4 B 701 OXT XIQ D 204 1555 1555 1.44 LINK N2 GP4 B 701 C1 2IL D 205 1555 1555 1.29 LINK ND2 ASN D 26 C1 NAG H 1 1555 1555 1.44 LINK ND2 ASN D 114 C1 NAG D 201 1555 1555 1.44 LINK C1 2IL D 202 O4 XIQ D 204 1555 1555 1.28 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.38 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.37 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.38 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.38 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.38 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.38 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.38 LINK O4 NAG I 2 C1 BMA I 3 1555 1555 1.37 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.38 LINK O4 NAG J 2 C1 BMA J 3 1555 1555 1.38 CISPEP 1 ASN C 49 PRO C 50 0 -0.84 CISPEP 2 ASN D 49 PRO D 50 0 -0.91 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000