HEADER DNA BINDING PROTEIN/DNA 30-OCT-23 8WY5 TITLE STRUCTURE OF GABIJA GAJA IN COMPLEX WITH DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDONUCLEASE GAJA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: GABIJA PROTEIN GAJA,NICKING ENDONUCLEASE GAJA; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'- COMPND 9 D(P*TP*TP*AP*AP*TP*AP*AP*CP*CP*CP*GP*GP*TP*TP*AP*TP*TP*TP*T)-3'); COMPND 10 CHAIN: E, G; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'- COMPND 14 D(P*AP*AP*AP*AP*TP*AP*AP*CP*CP*GP*GP*GP*TP*TP*AP*TP*TP*AP*A)-3'); COMPND 15 CHAIN: F, H; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS VD045; SOURCE 3 ORGANISM_TAXID: 1053225; SOURCE 4 GENE: GAJA, IIE_04982; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS ENDONUCLEASE, COMPLEX, DNA BINDING, DNA BINDING PROTEIN, DNA BINDING KEYWDS 2 PROTEIN-DNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR J.LI,Z.WANG,L.WANG REVDAT 2 03-APR-24 8WY5 1 JRNL REVDAT 1 28-FEB-24 8WY5 0 JRNL AUTH J.LI,R.CHENG,Z.WANG,W.YUAN,J.XIAO,X.ZHAO,X.DU,S.XIA,L.WANG, JRNL AUTH 2 B.ZHU,L.WANG JRNL TITL STRUCTURES AND ACTIVATION MECHANISM OF THE GABIJA ANTI-PHAGE JRNL TITL 2 SYSTEM. JRNL REF NATURE 2024 JRNL REFN ESSN 1476-4687 JRNL PMID 38471529 JRNL DOI 10.1038/S41586-024-07270-X REMARK 2 REMARK 2 RESOLUTION. 3.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.120 REMARK 3 NUMBER OF PARTICLES : 88461 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8WY5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1300042194. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : BINARY COMPLEX OF GAJA WITH REMARK 245 DSDNA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1400.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 125.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 157 REMARK 465 VAL A 158 REMARK 465 ASP A 159 REMARK 465 LEU A 160 REMARK 465 ASP A 161 REMARK 465 LYS A 162 REMARK 465 LEU A 163 REMARK 465 PHE A 164 REMARK 465 ALA A 165 REMARK 465 GLN A 166 REMARK 465 ASN A 167 REMARK 465 LYS A 168 REMARK 465 LYS A 169 REMARK 465 TYR A 170 REMARK 465 ILE A 171 REMARK 465 PHE A 172 REMARK 465 GLU A 173 REMARK 465 GLU A 174 REMARK 465 SER A 175 REMARK 465 GLN A 176 REMARK 465 GLY A 177 REMARK 465 ASN A 178 REMARK 465 GLU A 179 REMARK 465 SER A 180 REMARK 465 ASP A 181 REMARK 465 GLU A 182 REMARK 465 GLY A 183 REMARK 465 ILE A 184 REMARK 465 LEU A 185 REMARK 465 ASN A 186 REMARK 465 ASN A 187 REMARK 465 ILE A 188 REMARK 465 LYS A 189 REMARK 465 SER A 190 REMARK 465 LEU A 191 REMARK 465 THR A 192 REMARK 465 ASP A 193 REMARK 465 GLN A 194 REMARK 465 VAL A 195 REMARK 465 ASN A 196 REMARK 465 GLN A 197 REMARK 465 GLN A 198 REMARK 465 ILE A 199 REMARK 465 GLY A 200 REMARK 465 GLU A 201 REMARK 465 MET A 202 REMARK 465 THR A 203 REMARK 465 ILE A 204 REMARK 465 ILE A 205 REMARK 465 LYS A 206 REMARK 465 GLY A 207 REMARK 465 PHE A 208 REMARK 465 GLN A 209 REMARK 465 GLN A 210 REMARK 465 GLU A 211 REMARK 465 ILE A 212 REMARK 465 THR A 213 REMARK 465 SER A 214 REMARK 465 GLU A 215 REMARK 465 TYR A 216 REMARK 465 ARG A 217 REMARK 465 SER A 218 REMARK 465 LEU A 219 REMARK 465 LYS A 220 REMARK 465 LYS A 221 REMARK 465 GLU A 222 REMARK 465 GLU A 223 REMARK 465 VAL A 224 REMARK 465 SER A 225 REMARK 465 ILE A 226 REMARK 465 GLU A 227 REMARK 465 LEU A 228 REMARK 465 LYS A 229 REMARK 465 SER A 230 REMARK 465 GLU A 231 REMARK 465 MET A 232 REMARK 465 ALA A 233 REMARK 465 ILE A 234 REMARK 465 LYS A 235 REMARK 465 GLY A 236 REMARK 465 PHE A 237 REMARK 465 PHE A 238 REMARK 465 SER A 239 REMARK 465 ASP A 240 REMARK 465 ILE A 241 REMARK 465 ILE A 242 REMARK 465 PRO A 243 REMARK 465 TYR A 244 REMARK 465 ILE A 245 REMARK 465 LYS A 246 REMARK 465 LYS A 247 REMARK 465 ASP A 248 REMARK 465 GLY A 249 REMARK 465 ASP A 250 REMARK 465 SER A 251 REMARK 465 ASN A 252 REMARK 465 TYR A 253 REMARK 465 TYR A 254 REMARK 465 PRO A 255 REMARK 465 THR A 256 REMARK 465 SER A 257 REMARK 465 GLY A 258 REMARK 465 ASP A 259 REMARK 465 GLY A 260 REMARK 465 ARG A 261 REMARK 465 ARG A 262 REMARK 465 LYS A 263 REMARK 465 MET A 264 REMARK 465 LEU A 265 REMARK 465 SER A 266 REMARK 465 TYR A 267 REMARK 465 SER A 268 REMARK 465 ILE A 269 REMARK 465 TYR A 270 REMARK 465 ASN A 271 REMARK 465 TYR A 272 REMARK 465 LEU A 273 REMARK 465 ALA A 274 REMARK 465 LYS A 275 REMARK 465 LYS A 276 REMARK 465 LYS A 277 REMARK 465 TYR A 278 REMARK 465 GLU A 279 REMARK 465 ASP A 280 REMARK 465 GLU A 352 REMARK 465 GLU A 353 REMARK 465 ALA A 354 REMARK 465 TYR A 355 REMARK 465 GLY A 356 REMARK 465 SER A 357 REMARK 465 VAL A 358 REMARK 465 LYS A 359 REMARK 465 LYS A 360 REMARK 465 LYS A 361 REMARK 465 LEU A 362 REMARK 465 ASP A 576 REMARK 465 ARG A 577 REMARK 465 GLY A 578 REMARK 465 LEU B 157 REMARK 465 VAL B 158 REMARK 465 ASP B 159 REMARK 465 LEU B 160 REMARK 465 ASP B 161 REMARK 465 LYS B 162 REMARK 465 LEU B 163 REMARK 465 PHE B 164 REMARK 465 ALA B 165 REMARK 465 GLN B 166 REMARK 465 ASN B 167 REMARK 465 LYS B 168 REMARK 465 LYS B 169 REMARK 465 TYR B 170 REMARK 465 ILE B 171 REMARK 465 PHE B 172 REMARK 465 GLU B 173 REMARK 465 GLU B 174 REMARK 465 SER B 175 REMARK 465 GLN B 176 REMARK 465 GLY B 177 REMARK 465 ASN B 178 REMARK 465 GLU B 179 REMARK 465 SER B 180 REMARK 465 ASP B 181 REMARK 465 GLU B 182 REMARK 465 GLY B 183 REMARK 465 ILE B 184 REMARK 465 LEU B 185 REMARK 465 ASN B 186 REMARK 465 ASN B 187 REMARK 465 ILE B 188 REMARK 465 LYS B 189 REMARK 465 SER B 190 REMARK 465 LEU B 191 REMARK 465 THR B 192 REMARK 465 ASP B 193 REMARK 465 GLN B 194 REMARK 465 VAL B 195 REMARK 465 ASN B 196 REMARK 465 GLN B 197 REMARK 465 GLN B 198 REMARK 465 ILE B 199 REMARK 465 GLY B 200 REMARK 465 GLU B 201 REMARK 465 MET B 202 REMARK 465 THR B 203 REMARK 465 ILE B 204 REMARK 465 ILE B 205 REMARK 465 LYS B 206 REMARK 465 GLY B 207 REMARK 465 PHE B 208 REMARK 465 GLN B 209 REMARK 465 GLN B 210 REMARK 465 GLU B 211 REMARK 465 ILE B 212 REMARK 465 THR B 213 REMARK 465 SER B 214 REMARK 465 GLU B 215 REMARK 465 TYR B 216 REMARK 465 ARG B 217 REMARK 465 SER B 218 REMARK 465 LEU B 219 REMARK 465 LYS B 220 REMARK 465 LYS B 221 REMARK 465 GLU B 222 REMARK 465 GLU B 223 REMARK 465 VAL B 224 REMARK 465 SER B 225 REMARK 465 ILE B 226 REMARK 465 GLU B 227 REMARK 465 LEU B 228 REMARK 465 LYS B 229 REMARK 465 SER B 230 REMARK 465 GLU B 231 REMARK 465 MET B 232 REMARK 465 ALA B 233 REMARK 465 ILE B 234 REMARK 465 LYS B 235 REMARK 465 GLY B 236 REMARK 465 PHE B 237 REMARK 465 PHE B 238 REMARK 465 SER B 239 REMARK 465 ASP B 240 REMARK 465 ILE B 241 REMARK 465 ILE B 242 REMARK 465 PRO B 243 REMARK 465 TYR B 244 REMARK 465 ILE B 245 REMARK 465 LYS B 246 REMARK 465 LYS B 247 REMARK 465 ASP B 248 REMARK 465 GLY B 249 REMARK 465 ASP B 250 REMARK 465 SER B 251 REMARK 465 ASN B 252 REMARK 465 TYR B 253 REMARK 465 TYR B 254 REMARK 465 PRO B 255 REMARK 465 THR B 256 REMARK 465 SER B 257 REMARK 465 GLY B 258 REMARK 465 ASP B 259 REMARK 465 GLY B 260 REMARK 465 ARG B 261 REMARK 465 ARG B 262 REMARK 465 LYS B 263 REMARK 465 MET B 264 REMARK 465 LEU B 265 REMARK 465 SER B 266 REMARK 465 TYR B 267 REMARK 465 SER B 268 REMARK 465 ILE B 269 REMARK 465 TYR B 270 REMARK 465 ASN B 271 REMARK 465 TYR B 272 REMARK 465 LEU B 273 REMARK 465 ALA B 274 REMARK 465 LYS B 275 REMARK 465 LYS B 276 REMARK 465 LYS B 277 REMARK 465 TYR B 278 REMARK 465 GLU B 279 REMARK 465 ASP B 280 REMARK 465 GLU B 352 REMARK 465 GLU B 353 REMARK 465 ALA B 354 REMARK 465 TYR B 355 REMARK 465 GLY B 356 REMARK 465 SER B 357 REMARK 465 ASP B 576 REMARK 465 ARG B 577 REMARK 465 GLY B 578 REMARK 465 LEU C 157 REMARK 465 VAL C 158 REMARK 465 ASP C 159 REMARK 465 LEU C 160 REMARK 465 ASP C 161 REMARK 465 LYS C 162 REMARK 465 LEU C 163 REMARK 465 PHE C 164 REMARK 465 ALA C 165 REMARK 465 GLN C 166 REMARK 465 ASN C 167 REMARK 465 LYS C 168 REMARK 465 LYS C 169 REMARK 465 TYR C 170 REMARK 465 ILE C 171 REMARK 465 PHE C 172 REMARK 465 GLU C 173 REMARK 465 GLU C 174 REMARK 465 SER C 175 REMARK 465 GLN C 176 REMARK 465 GLY C 177 REMARK 465 ASN C 178 REMARK 465 GLU C 179 REMARK 465 SER C 180 REMARK 465 ASP C 181 REMARK 465 GLU C 182 REMARK 465 GLY C 183 REMARK 465 ILE C 184 REMARK 465 LEU C 185 REMARK 465 ASN C 186 REMARK 465 ASN C 187 REMARK 465 ILE C 188 REMARK 465 LYS C 189 REMARK 465 SER C 190 REMARK 465 LEU C 191 REMARK 465 THR C 192 REMARK 465 ASP C 193 REMARK 465 GLN C 194 REMARK 465 VAL C 195 REMARK 465 ASN C 196 REMARK 465 GLN C 197 REMARK 465 GLN C 198 REMARK 465 ILE C 199 REMARK 465 GLY C 200 REMARK 465 GLU C 201 REMARK 465 MET C 202 REMARK 465 THR C 203 REMARK 465 ILE C 204 REMARK 465 ILE C 205 REMARK 465 LYS C 206 REMARK 465 GLY C 207 REMARK 465 PHE C 208 REMARK 465 GLN C 209 REMARK 465 GLN C 210 REMARK 465 GLU C 211 REMARK 465 ILE C 212 REMARK 465 THR C 213 REMARK 465 SER C 214 REMARK 465 GLU C 215 REMARK 465 TYR C 216 REMARK 465 ARG C 217 REMARK 465 SER C 218 REMARK 465 LEU C 219 REMARK 465 LYS C 220 REMARK 465 LYS C 221 REMARK 465 GLU C 222 REMARK 465 GLU C 223 REMARK 465 VAL C 224 REMARK 465 SER C 225 REMARK 465 ILE C 226 REMARK 465 GLU C 227 REMARK 465 LEU C 228 REMARK 465 LYS C 229 REMARK 465 SER C 230 REMARK 465 GLU C 231 REMARK 465 MET C 232 REMARK 465 ALA C 233 REMARK 465 ILE C 234 REMARK 465 LYS C 235 REMARK 465 GLY C 236 REMARK 465 PHE C 237 REMARK 465 PHE C 238 REMARK 465 SER C 239 REMARK 465 ASP C 240 REMARK 465 ILE C 241 REMARK 465 ILE C 242 REMARK 465 PRO C 243 REMARK 465 TYR C 244 REMARK 465 ILE C 245 REMARK 465 LYS C 246 REMARK 465 LYS C 247 REMARK 465 ASP C 248 REMARK 465 GLY C 249 REMARK 465 ASP C 250 REMARK 465 SER C 251 REMARK 465 ASN C 252 REMARK 465 TYR C 253 REMARK 465 TYR C 254 REMARK 465 PRO C 255 REMARK 465 THR C 256 REMARK 465 SER C 257 REMARK 465 GLY C 258 REMARK 465 ASP C 259 REMARK 465 GLY C 260 REMARK 465 ARG C 261 REMARK 465 ARG C 262 REMARK 465 LYS C 263 REMARK 465 MET C 264 REMARK 465 LEU C 265 REMARK 465 SER C 266 REMARK 465 TYR C 267 REMARK 465 SER C 268 REMARK 465 ILE C 269 REMARK 465 TYR C 270 REMARK 465 ASN C 271 REMARK 465 TYR C 272 REMARK 465 LEU C 273 REMARK 465 ALA C 274 REMARK 465 LYS C 275 REMARK 465 LYS C 276 REMARK 465 LYS C 277 REMARK 465 TYR C 278 REMARK 465 GLU C 279 REMARK 465 ASP C 280 REMARK 465 GLU C 352 REMARK 465 GLU C 353 REMARK 465 ALA C 354 REMARK 465 TYR C 355 REMARK 465 GLY C 356 REMARK 465 SER C 357 REMARK 465 VAL C 358 REMARK 465 LYS C 359 REMARK 465 LYS C 360 REMARK 465 LYS C 361 REMARK 465 LEU C 362 REMARK 465 ASP C 576 REMARK 465 ARG C 577 REMARK 465 GLY C 578 REMARK 465 LEU D 157 REMARK 465 VAL D 158 REMARK 465 ASP D 159 REMARK 465 LEU D 160 REMARK 465 ASP D 161 REMARK 465 LYS D 162 REMARK 465 LEU D 163 REMARK 465 PHE D 164 REMARK 465 ALA D 165 REMARK 465 GLN D 166 REMARK 465 ASN D 167 REMARK 465 LYS D 168 REMARK 465 LYS D 169 REMARK 465 TYR D 170 REMARK 465 ILE D 171 REMARK 465 PHE D 172 REMARK 465 GLU D 173 REMARK 465 GLU D 174 REMARK 465 SER D 175 REMARK 465 GLN D 176 REMARK 465 GLY D 177 REMARK 465 ASN D 178 REMARK 465 GLU D 179 REMARK 465 SER D 180 REMARK 465 ASP D 181 REMARK 465 GLU D 182 REMARK 465 GLY D 183 REMARK 465 ILE D 184 REMARK 465 LEU D 185 REMARK 465 ASN D 186 REMARK 465 ASN D 187 REMARK 465 ILE D 188 REMARK 465 LYS D 189 REMARK 465 SER D 190 REMARK 465 LEU D 191 REMARK 465 THR D 192 REMARK 465 ASP D 193 REMARK 465 GLN D 194 REMARK 465 VAL D 195 REMARK 465 ASN D 196 REMARK 465 GLN D 197 REMARK 465 GLN D 198 REMARK 465 ILE D 199 REMARK 465 GLY D 200 REMARK 465 GLU D 201 REMARK 465 MET D 202 REMARK 465 THR D 203 REMARK 465 ILE D 204 REMARK 465 ILE D 205 REMARK 465 LYS D 206 REMARK 465 GLY D 207 REMARK 465 PHE D 208 REMARK 465 GLN D 209 REMARK 465 GLN D 210 REMARK 465 GLU D 211 REMARK 465 ILE D 212 REMARK 465 THR D 213 REMARK 465 SER D 214 REMARK 465 GLU D 215 REMARK 465 TYR D 216 REMARK 465 ARG D 217 REMARK 465 SER D 218 REMARK 465 LEU D 219 REMARK 465 LYS D 220 REMARK 465 LYS D 221 REMARK 465 GLU D 222 REMARK 465 GLU D 223 REMARK 465 VAL D 224 REMARK 465 SER D 225 REMARK 465 ILE D 226 REMARK 465 GLU D 227 REMARK 465 LEU D 228 REMARK 465 LYS D 229 REMARK 465 SER D 230 REMARK 465 GLU D 231 REMARK 465 MET D 232 REMARK 465 ALA D 233 REMARK 465 ILE D 234 REMARK 465 LYS D 235 REMARK 465 GLY D 236 REMARK 465 PHE D 237 REMARK 465 PHE D 238 REMARK 465 SER D 239 REMARK 465 ASP D 240 REMARK 465 ILE D 241 REMARK 465 ILE D 242 REMARK 465 PRO D 243 REMARK 465 TYR D 244 REMARK 465 ILE D 245 REMARK 465 LYS D 246 REMARK 465 LYS D 247 REMARK 465 ASP D 248 REMARK 465 GLY D 249 REMARK 465 ASP D 250 REMARK 465 SER D 251 REMARK 465 ASN D 252 REMARK 465 TYR D 253 REMARK 465 TYR D 254 REMARK 465 PRO D 255 REMARK 465 THR D 256 REMARK 465 SER D 257 REMARK 465 GLY D 258 REMARK 465 ASP D 259 REMARK 465 GLY D 260 REMARK 465 ARG D 261 REMARK 465 ARG D 262 REMARK 465 LYS D 263 REMARK 465 MET D 264 REMARK 465 LEU D 265 REMARK 465 SER D 266 REMARK 465 TYR D 267 REMARK 465 SER D 268 REMARK 465 ILE D 269 REMARK 465 TYR D 270 REMARK 465 ASN D 271 REMARK 465 TYR D 272 REMARK 465 LEU D 273 REMARK 465 ALA D 274 REMARK 465 LYS D 275 REMARK 465 LYS D 276 REMARK 465 LYS D 277 REMARK 465 TYR D 278 REMARK 465 GLU D 279 REMARK 465 ASP D 280 REMARK 465 GLU D 352 REMARK 465 GLU D 353 REMARK 465 ALA D 354 REMARK 465 TYR D 355 REMARK 465 GLY D 356 REMARK 465 SER D 357 REMARK 465 ASP D 576 REMARK 465 ARG D 577 REMARK 465 GLY D 578 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 537 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 ASP B 76 CB - CG - OD1 ANGL. DEV. = 10.0 DEGREES REMARK 500 LEU B 77 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 DA E 8 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC E 9 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC G 9 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DT G 15 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT G 18 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA H 3 C3' - C2' - C1' ANGL. DEV. = -4.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 62 -142.97 55.75 REMARK 500 THR A 65 -179.02 56.61 REMARK 500 SER A 78 -125.47 55.34 REMARK 500 GLU A 81 5.97 57.48 REMARK 500 LYS A 94 -96.88 56.01 REMARK 500 ASN A 121 133.88 63.66 REMARK 500 GLU A 289 71.64 51.56 REMARK 500 GLU A 397 34.05 -96.82 REMARK 500 ASP A 472 -135.59 22.80 REMARK 500 ILE A 510 -63.39 -122.85 REMARK 500 SER B 4 -52.82 -120.61 REMARK 500 LYS B 9 -64.93 -100.58 REMARK 500 ASP B 22 -168.60 -103.76 REMARK 500 LYS B 62 -71.63 -94.83 REMARK 500 HIS B 63 -14.52 -140.83 REMARK 500 THR B 65 161.37 62.41 REMARK 500 ASP B 76 -10.78 73.12 REMARK 500 LEU B 77 -4.78 65.95 REMARK 500 TYR B 80 -142.15 41.36 REMARK 500 GLU B 81 -65.96 44.38 REMARK 500 VAL B 93 50.03 -115.91 REMARK 500 ALA B 100 30.10 -95.85 REMARK 500 ASN B 121 75.10 57.41 REMARK 500 MET B 328 118.85 -160.35 REMARK 500 THR B 411 59.05 -96.84 REMARK 500 ILE B 510 -68.58 -139.26 REMARK 500 LYS C 62 -143.47 55.23 REMARK 500 THR C 65 174.69 60.64 REMARK 500 SER C 78 -128.47 57.96 REMARK 500 GLU C 81 9.28 53.90 REMARK 500 LYS C 94 -95.44 57.61 REMARK 500 ASN C 121 135.31 63.76 REMARK 500 GLU C 289 71.99 51.49 REMARK 500 GLU C 397 31.08 -96.08 REMARK 500 ASP C 472 -137.28 21.81 REMARK 500 ARG C 504 32.95 -98.49 REMARK 500 LYS D 9 -64.27 -93.64 REMARK 500 ASP D 59 58.85 -98.17 REMARK 500 HIS D 61 -99.75 50.25 REMARK 500 HIS D 63 -5.71 -143.39 REMARK 500 THR D 65 149.00 66.88 REMARK 500 LEU D 75 14.02 -141.32 REMARK 500 ASP D 76 -70.87 61.30 REMARK 500 SER D 78 34.35 -141.29 REMARK 500 TYR D 80 -136.77 39.81 REMARK 500 GLU D 81 -89.84 43.85 REMARK 500 ALA D 100 30.28 -99.63 REMARK 500 ASN D 121 74.11 57.48 REMARK 500 GLU D 289 70.50 51.44 REMARK 500 VAL D 394 -60.01 -100.84 REMARK 500 REMARK 500 THIS ENTRY HAS 53 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 432 OD2 REMARK 620 2 DC E 11 OP1 155.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 379 OE2 REMARK 620 2 ASP B 432 OD2 62.3 REMARK 620 3 DG F 11 OP1 87.2 146.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C1001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 432 OD2 REMARK 620 2 ASP C 511 OD1 80.3 REMARK 620 3 DC G 11 OP1 153.4 119.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D1001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 379 OE2 REMARK 620 2 ASP D 432 OD2 69.7 REMARK 620 3 DG H 11 OP1 91.3 159.3 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-37916 RELATED DB: EMDB REMARK 900 TETRAMER GAJA AND SUBSTRATE DNA COMPLEX DBREF 8WY5 A 1 578 UNP J8H9C1 GAJA_BACC6 1 578 DBREF 8WY5 B 1 578 UNP J8H9C1 GAJA_BACC6 1 578 DBREF 8WY5 C 1 578 UNP J8H9C1 GAJA_BACC6 1 578 DBREF 8WY5 D 1 578 UNP J8H9C1 GAJA_BACC6 1 578 DBREF 8WY5 E 2 20 PDB 8WY5 8WY5 2 20 DBREF 8WY5 F 2 20 PDB 8WY5 8WY5 2 20 DBREF 8WY5 G 2 20 PDB 8WY5 8WY5 2 20 DBREF 8WY5 H 2 20 PDB 8WY5 8WY5 2 20 SEQRES 1 A 578 MET LYS PHE SER ASN ILE THR ILE LYS ASN PHE ARG ASN SEQRES 2 A 578 PHE GLU LYS VAL ASN ILE ASN LEU ASP ASN LYS ASN VAL SEQRES 3 A 578 ILE PHE GLY MET ASN ASP ILE GLY LYS THR ASN PHE LEU SEQRES 4 A 578 TYR ALA LEU ARG PHE LEU LEU ASP LYS GLU ILE ARG LYS SEQRES 5 A 578 PHE GLY PHE ASN LYS SER ASP TYR HIS LYS HIS ASP THR SEQRES 6 A 578 SER LYS LYS ILE GLU ILE ILE LEU THR LEU ASP LEU SER SEQRES 7 A 578 ASN TYR GLU LYS ASP GLU ASP THR LYS LYS LEU ILE SER SEQRES 8 A 578 VAL VAL LYS GLY ALA ARG THR SER ALA ASN ALA ASP VAL SEQRES 9 A 578 PHE TYR ILE ALA LEU GLU SER LYS TYR ASP ASP LYS GLU SEQRES 10 A 578 LEU TYR GLY ASN ILE ILE LEU LYS TRP GLY SER GLU LEU SEQRES 11 A 578 ASP ASN LEU ILE ASP ILE PRO GLY ARG GLY ASN ILE ASN SEQRES 12 A 578 ALA LEU ASP ASN VAL PHE LYS VAL ILE TYR ILE ASN PRO SEQRES 13 A 578 LEU VAL ASP LEU ASP LYS LEU PHE ALA GLN ASN LYS LYS SEQRES 14 A 578 TYR ILE PHE GLU GLU SER GLN GLY ASN GLU SER ASP GLU SEQRES 15 A 578 GLY ILE LEU ASN ASN ILE LYS SER LEU THR ASP GLN VAL SEQRES 16 A 578 ASN GLN GLN ILE GLY GLU MET THR ILE ILE LYS GLY PHE SEQRES 17 A 578 GLN GLN GLU ILE THR SER GLU TYR ARG SER LEU LYS LYS SEQRES 18 A 578 GLU GLU VAL SER ILE GLU LEU LYS SER GLU MET ALA ILE SEQRES 19 A 578 LYS GLY PHE PHE SER ASP ILE ILE PRO TYR ILE LYS LYS SEQRES 20 A 578 ASP GLY ASP SER ASN TYR TYR PRO THR SER GLY ASP GLY SEQRES 21 A 578 ARG ARG LYS MET LEU SER TYR SER ILE TYR ASN TYR LEU SEQRES 22 A 578 ALA LYS LYS LYS TYR GLU ASP LYS ILE VAL ILE TYR LEU SEQRES 23 A 578 ILE GLU GLU PRO GLU ILE SER LEU HIS ARG SER MET GLN SEQRES 24 A 578 ILE ALA LEU SER LYS GLN LEU PHE GLU GLN SER THR TYR SEQRES 25 A 578 LYS TYR PHE PHE LEU SER THR HIS SER PRO GLU LEU LEU SEQRES 26 A 578 TYR GLU MET ASP ASN THR ARG LEU ILE ARG VAL HIS SER SEQRES 27 A 578 THR GLU LYS VAL VAL CYS SER SER HIS MET TYR ASN VAL SEQRES 28 A 578 GLU GLU ALA TYR GLY SER VAL LYS LYS LYS LEU ASN LYS SEQRES 29 A 578 ALA LEU SER SER ALA LEU PHE ALA GLU ARG VAL LEU LEU SEQRES 30 A 578 ILE GLU GLY PRO SER GLU LYS ILE LEU PHE GLU LYS VAL SEQRES 31 A 578 LEU ASP GLU VAL GLU PRO GLU TYR GLU LEU ASN GLY GLY SEQRES 32 A 578 PHE LEU LEU GLU VAL GLY GLY THR TYR PHE ASN HIS TYR SEQRES 33 A 578 VAL CYS THR LEU ASN ASP LEU GLY ILE THR HIS ILE ILE SEQRES 34 A 578 LYS THR ASP ASN ASP LEU LYS SER LYS LYS GLY LYS LYS SEQRES 35 A 578 GLY VAL TYR GLU LEU LEU GLY LEU ASN ARG CYS LEU ASN SEQRES 36 A 578 LEU LEU GLY ARG GLU ASN LEU ASP GLU ILE THR ILE ASP SEQRES 37 A 578 ILE PRO GLU ASP ILE LYS GLY LYS LYS LYS LYS GLU ARG SEQRES 38 A 578 LEU ASN GLU ARG LYS LYS GLU ILE PHE LYS GLN TYR LYS SEQRES 39 A 578 ASN GLU VAL GLY GLU PHE LEU GLY GLU ARG ILE TYR LEU SEQRES 40 A 578 SER GLU ILE ASP LEU GLU ASN ASP LEU TYR SER ALA ILE SEQRES 41 A 578 GLY GLU SER MET LYS ARG ILE PHE GLU ASN GLU ASP PRO SEQRES 42 A 578 VAL HIS TYR LEU GLN LYS SER LYS LEU PHE ASN MET VAL SEQRES 43 A 578 GLU LEU VAL ASN ASN LEU SER THR LYS ASP CYS PHE ASP SEQRES 44 A 578 VAL PHE GLU HIS GLU LYS PHE ALA CYS LEU LYS GLU LEU SEQRES 45 A 578 VAL GLY SER ASP ARG GLY SEQRES 1 B 578 MET LYS PHE SER ASN ILE THR ILE LYS ASN PHE ARG ASN SEQRES 2 B 578 PHE GLU LYS VAL ASN ILE ASN LEU ASP ASN LYS ASN VAL SEQRES 3 B 578 ILE PHE GLY MET ASN ASP ILE GLY LYS THR ASN PHE LEU SEQRES 4 B 578 TYR ALA LEU ARG PHE LEU LEU ASP LYS GLU ILE ARG LYS SEQRES 5 B 578 PHE GLY PHE ASN LYS SER ASP TYR HIS LYS HIS ASP THR SEQRES 6 B 578 SER LYS LYS ILE GLU ILE ILE LEU THR LEU ASP LEU SER SEQRES 7 B 578 ASN TYR GLU LYS ASP GLU ASP THR LYS LYS LEU ILE SER SEQRES 8 B 578 VAL VAL LYS GLY ALA ARG THR SER ALA ASN ALA ASP VAL SEQRES 9 B 578 PHE TYR ILE ALA LEU GLU SER LYS TYR ASP ASP LYS GLU SEQRES 10 B 578 LEU TYR GLY ASN ILE ILE LEU LYS TRP GLY SER GLU LEU SEQRES 11 B 578 ASP ASN LEU ILE ASP ILE PRO GLY ARG GLY ASN ILE ASN SEQRES 12 B 578 ALA LEU ASP ASN VAL PHE LYS VAL ILE TYR ILE ASN PRO SEQRES 13 B 578 LEU VAL ASP LEU ASP LYS LEU PHE ALA GLN ASN LYS LYS SEQRES 14 B 578 TYR ILE PHE GLU GLU SER GLN GLY ASN GLU SER ASP GLU SEQRES 15 B 578 GLY ILE LEU ASN ASN ILE LYS SER LEU THR ASP GLN VAL SEQRES 16 B 578 ASN GLN GLN ILE GLY GLU MET THR ILE ILE LYS GLY PHE SEQRES 17 B 578 GLN GLN GLU ILE THR SER GLU TYR ARG SER LEU LYS LYS SEQRES 18 B 578 GLU GLU VAL SER ILE GLU LEU LYS SER GLU MET ALA ILE SEQRES 19 B 578 LYS GLY PHE PHE SER ASP ILE ILE PRO TYR ILE LYS LYS SEQRES 20 B 578 ASP GLY ASP SER ASN TYR TYR PRO THR SER GLY ASP GLY SEQRES 21 B 578 ARG ARG LYS MET LEU SER TYR SER ILE TYR ASN TYR LEU SEQRES 22 B 578 ALA LYS LYS LYS TYR GLU ASP LYS ILE VAL ILE TYR LEU SEQRES 23 B 578 ILE GLU GLU PRO GLU ILE SER LEU HIS ARG SER MET GLN SEQRES 24 B 578 ILE ALA LEU SER LYS GLN LEU PHE GLU GLN SER THR TYR SEQRES 25 B 578 LYS TYR PHE PHE LEU SER THR HIS SER PRO GLU LEU LEU SEQRES 26 B 578 TYR GLU MET ASP ASN THR ARG LEU ILE ARG VAL HIS SER SEQRES 27 B 578 THR GLU LYS VAL VAL CYS SER SER HIS MET TYR ASN VAL SEQRES 28 B 578 GLU GLU ALA TYR GLY SER VAL LYS LYS LYS LEU ASN LYS SEQRES 29 B 578 ALA LEU SER SER ALA LEU PHE ALA GLU ARG VAL LEU LEU SEQRES 30 B 578 ILE GLU GLY PRO SER GLU LYS ILE LEU PHE GLU LYS VAL SEQRES 31 B 578 LEU ASP GLU VAL GLU PRO GLU TYR GLU LEU ASN GLY GLY SEQRES 32 B 578 PHE LEU LEU GLU VAL GLY GLY THR TYR PHE ASN HIS TYR SEQRES 33 B 578 VAL CYS THR LEU ASN ASP LEU GLY ILE THR HIS ILE ILE SEQRES 34 B 578 LYS THR ASP ASN ASP LEU LYS SER LYS LYS GLY LYS LYS SEQRES 35 B 578 GLY VAL TYR GLU LEU LEU GLY LEU ASN ARG CYS LEU ASN SEQRES 36 B 578 LEU LEU GLY ARG GLU ASN LEU ASP GLU ILE THR ILE ASP SEQRES 37 B 578 ILE PRO GLU ASP ILE LYS GLY LYS LYS LYS LYS GLU ARG SEQRES 38 B 578 LEU ASN GLU ARG LYS LYS GLU ILE PHE LYS GLN TYR LYS SEQRES 39 B 578 ASN GLU VAL GLY GLU PHE LEU GLY GLU ARG ILE TYR LEU SEQRES 40 B 578 SER GLU ILE ASP LEU GLU ASN ASP LEU TYR SER ALA ILE SEQRES 41 B 578 GLY GLU SER MET LYS ARG ILE PHE GLU ASN GLU ASP PRO SEQRES 42 B 578 VAL HIS TYR LEU GLN LYS SER LYS LEU PHE ASN MET VAL SEQRES 43 B 578 GLU LEU VAL ASN ASN LEU SER THR LYS ASP CYS PHE ASP SEQRES 44 B 578 VAL PHE GLU HIS GLU LYS PHE ALA CYS LEU LYS GLU LEU SEQRES 45 B 578 VAL GLY SER ASP ARG GLY SEQRES 1 C 578 MET LYS PHE SER ASN ILE THR ILE LYS ASN PHE ARG ASN SEQRES 2 C 578 PHE GLU LYS VAL ASN ILE ASN LEU ASP ASN LYS ASN VAL SEQRES 3 C 578 ILE PHE GLY MET ASN ASP ILE GLY LYS THR ASN PHE LEU SEQRES 4 C 578 TYR ALA LEU ARG PHE LEU LEU ASP LYS GLU ILE ARG LYS SEQRES 5 C 578 PHE GLY PHE ASN LYS SER ASP TYR HIS LYS HIS ASP THR SEQRES 6 C 578 SER LYS LYS ILE GLU ILE ILE LEU THR LEU ASP LEU SER SEQRES 7 C 578 ASN TYR GLU LYS ASP GLU ASP THR LYS LYS LEU ILE SER SEQRES 8 C 578 VAL VAL LYS GLY ALA ARG THR SER ALA ASN ALA ASP VAL SEQRES 9 C 578 PHE TYR ILE ALA LEU GLU SER LYS TYR ASP ASP LYS GLU SEQRES 10 C 578 LEU TYR GLY ASN ILE ILE LEU LYS TRP GLY SER GLU LEU SEQRES 11 C 578 ASP ASN LEU ILE ASP ILE PRO GLY ARG GLY ASN ILE ASN SEQRES 12 C 578 ALA LEU ASP ASN VAL PHE LYS VAL ILE TYR ILE ASN PRO SEQRES 13 C 578 LEU VAL ASP LEU ASP LYS LEU PHE ALA GLN ASN LYS LYS SEQRES 14 C 578 TYR ILE PHE GLU GLU SER GLN GLY ASN GLU SER ASP GLU SEQRES 15 C 578 GLY ILE LEU ASN ASN ILE LYS SER LEU THR ASP GLN VAL SEQRES 16 C 578 ASN GLN GLN ILE GLY GLU MET THR ILE ILE LYS GLY PHE SEQRES 17 C 578 GLN GLN GLU ILE THR SER GLU TYR ARG SER LEU LYS LYS SEQRES 18 C 578 GLU GLU VAL SER ILE GLU LEU LYS SER GLU MET ALA ILE SEQRES 19 C 578 LYS GLY PHE PHE SER ASP ILE ILE PRO TYR ILE LYS LYS SEQRES 20 C 578 ASP GLY ASP SER ASN TYR TYR PRO THR SER GLY ASP GLY SEQRES 21 C 578 ARG ARG LYS MET LEU SER TYR SER ILE TYR ASN TYR LEU SEQRES 22 C 578 ALA LYS LYS LYS TYR GLU ASP LYS ILE VAL ILE TYR LEU SEQRES 23 C 578 ILE GLU GLU PRO GLU ILE SER LEU HIS ARG SER MET GLN SEQRES 24 C 578 ILE ALA LEU SER LYS GLN LEU PHE GLU GLN SER THR TYR SEQRES 25 C 578 LYS TYR PHE PHE LEU SER THR HIS SER PRO GLU LEU LEU SEQRES 26 C 578 TYR GLU MET ASP ASN THR ARG LEU ILE ARG VAL HIS SER SEQRES 27 C 578 THR GLU LYS VAL VAL CYS SER SER HIS MET TYR ASN VAL SEQRES 28 C 578 GLU GLU ALA TYR GLY SER VAL LYS LYS LYS LEU ASN LYS SEQRES 29 C 578 ALA LEU SER SER ALA LEU PHE ALA GLU ARG VAL LEU LEU SEQRES 30 C 578 ILE GLU GLY PRO SER GLU LYS ILE LEU PHE GLU LYS VAL SEQRES 31 C 578 LEU ASP GLU VAL GLU PRO GLU TYR GLU LEU ASN GLY GLY SEQRES 32 C 578 PHE LEU LEU GLU VAL GLY GLY THR TYR PHE ASN HIS TYR SEQRES 33 C 578 VAL CYS THR LEU ASN ASP LEU GLY ILE THR HIS ILE ILE SEQRES 34 C 578 LYS THR ASP ASN ASP LEU LYS SER LYS LYS GLY LYS LYS SEQRES 35 C 578 GLY VAL TYR GLU LEU LEU GLY LEU ASN ARG CYS LEU ASN SEQRES 36 C 578 LEU LEU GLY ARG GLU ASN LEU ASP GLU ILE THR ILE ASP SEQRES 37 C 578 ILE PRO GLU ASP ILE LYS GLY LYS LYS LYS LYS GLU ARG SEQRES 38 C 578 LEU ASN GLU ARG LYS LYS GLU ILE PHE LYS GLN TYR LYS SEQRES 39 C 578 ASN GLU VAL GLY GLU PHE LEU GLY GLU ARG ILE TYR LEU SEQRES 40 C 578 SER GLU ILE ASP LEU GLU ASN ASP LEU TYR SER ALA ILE SEQRES 41 C 578 GLY GLU SER MET LYS ARG ILE PHE GLU ASN GLU ASP PRO SEQRES 42 C 578 VAL HIS TYR LEU GLN LYS SER LYS LEU PHE ASN MET VAL SEQRES 43 C 578 GLU LEU VAL ASN ASN LEU SER THR LYS ASP CYS PHE ASP SEQRES 44 C 578 VAL PHE GLU HIS GLU LYS PHE ALA CYS LEU LYS GLU LEU SEQRES 45 C 578 VAL GLY SER ASP ARG GLY SEQRES 1 D 578 MET LYS PHE SER ASN ILE THR ILE LYS ASN PHE ARG ASN SEQRES 2 D 578 PHE GLU LYS VAL ASN ILE ASN LEU ASP ASN LYS ASN VAL SEQRES 3 D 578 ILE PHE GLY MET ASN ASP ILE GLY LYS THR ASN PHE LEU SEQRES 4 D 578 TYR ALA LEU ARG PHE LEU LEU ASP LYS GLU ILE ARG LYS SEQRES 5 D 578 PHE GLY PHE ASN LYS SER ASP TYR HIS LYS HIS ASP THR SEQRES 6 D 578 SER LYS LYS ILE GLU ILE ILE LEU THR LEU ASP LEU SER SEQRES 7 D 578 ASN TYR GLU LYS ASP GLU ASP THR LYS LYS LEU ILE SER SEQRES 8 D 578 VAL VAL LYS GLY ALA ARG THR SER ALA ASN ALA ASP VAL SEQRES 9 D 578 PHE TYR ILE ALA LEU GLU SER LYS TYR ASP ASP LYS GLU SEQRES 10 D 578 LEU TYR GLY ASN ILE ILE LEU LYS TRP GLY SER GLU LEU SEQRES 11 D 578 ASP ASN LEU ILE ASP ILE PRO GLY ARG GLY ASN ILE ASN SEQRES 12 D 578 ALA LEU ASP ASN VAL PHE LYS VAL ILE TYR ILE ASN PRO SEQRES 13 D 578 LEU VAL ASP LEU ASP LYS LEU PHE ALA GLN ASN LYS LYS SEQRES 14 D 578 TYR ILE PHE GLU GLU SER GLN GLY ASN GLU SER ASP GLU SEQRES 15 D 578 GLY ILE LEU ASN ASN ILE LYS SER LEU THR ASP GLN VAL SEQRES 16 D 578 ASN GLN GLN ILE GLY GLU MET THR ILE ILE LYS GLY PHE SEQRES 17 D 578 GLN GLN GLU ILE THR SER GLU TYR ARG SER LEU LYS LYS SEQRES 18 D 578 GLU GLU VAL SER ILE GLU LEU LYS SER GLU MET ALA ILE SEQRES 19 D 578 LYS GLY PHE PHE SER ASP ILE ILE PRO TYR ILE LYS LYS SEQRES 20 D 578 ASP GLY ASP SER ASN TYR TYR PRO THR SER GLY ASP GLY SEQRES 21 D 578 ARG ARG LYS MET LEU SER TYR SER ILE TYR ASN TYR LEU SEQRES 22 D 578 ALA LYS LYS LYS TYR GLU ASP LYS ILE VAL ILE TYR LEU SEQRES 23 D 578 ILE GLU GLU PRO GLU ILE SER LEU HIS ARG SER MET GLN SEQRES 24 D 578 ILE ALA LEU SER LYS GLN LEU PHE GLU GLN SER THR TYR SEQRES 25 D 578 LYS TYR PHE PHE LEU SER THR HIS SER PRO GLU LEU LEU SEQRES 26 D 578 TYR GLU MET ASP ASN THR ARG LEU ILE ARG VAL HIS SER SEQRES 27 D 578 THR GLU LYS VAL VAL CYS SER SER HIS MET TYR ASN VAL SEQRES 28 D 578 GLU GLU ALA TYR GLY SER VAL LYS LYS LYS LEU ASN LYS SEQRES 29 D 578 ALA LEU SER SER ALA LEU PHE ALA GLU ARG VAL LEU LEU SEQRES 30 D 578 ILE GLU GLY PRO SER GLU LYS ILE LEU PHE GLU LYS VAL SEQRES 31 D 578 LEU ASP GLU VAL GLU PRO GLU TYR GLU LEU ASN GLY GLY SEQRES 32 D 578 PHE LEU LEU GLU VAL GLY GLY THR TYR PHE ASN HIS TYR SEQRES 33 D 578 VAL CYS THR LEU ASN ASP LEU GLY ILE THR HIS ILE ILE SEQRES 34 D 578 LYS THR ASP ASN ASP LEU LYS SER LYS LYS GLY LYS LYS SEQRES 35 D 578 GLY VAL TYR GLU LEU LEU GLY LEU ASN ARG CYS LEU ASN SEQRES 36 D 578 LEU LEU GLY ARG GLU ASN LEU ASP GLU ILE THR ILE ASP SEQRES 37 D 578 ILE PRO GLU ASP ILE LYS GLY LYS LYS LYS LYS GLU ARG SEQRES 38 D 578 LEU ASN GLU ARG LYS LYS GLU ILE PHE LYS GLN TYR LYS SEQRES 39 D 578 ASN GLU VAL GLY GLU PHE LEU GLY GLU ARG ILE TYR LEU SEQRES 40 D 578 SER GLU ILE ASP LEU GLU ASN ASP LEU TYR SER ALA ILE SEQRES 41 D 578 GLY GLU SER MET LYS ARG ILE PHE GLU ASN GLU ASP PRO SEQRES 42 D 578 VAL HIS TYR LEU GLN LYS SER LYS LEU PHE ASN MET VAL SEQRES 43 D 578 GLU LEU VAL ASN ASN LEU SER THR LYS ASP CYS PHE ASP SEQRES 44 D 578 VAL PHE GLU HIS GLU LYS PHE ALA CYS LEU LYS GLU LEU SEQRES 45 D 578 VAL GLY SER ASP ARG GLY SEQRES 1 E 19 DT DT DA DA DT DA DA DC DC DC DG DG DT SEQRES 2 E 19 DT DA DT DT DT DT SEQRES 1 F 19 DA DA DA DA DT DA DA DC DC DG DG DG DT SEQRES 2 F 19 DT DA DT DT DA DA SEQRES 1 G 19 DT DT DA DA DT DA DA DC DC DC DG DG DT SEQRES 2 G 19 DT DA DT DT DT DT SEQRES 1 H 19 DA DA DA DA DT DA DA DC DC DG DG DG DT SEQRES 2 H 19 DT DA DT DT DA DA HET CA A1001 1 HET CA B1001 1 HET CA C1001 1 HET CA D1001 1 HETNAM CA CALCIUM ION FORMUL 9 CA 4(CA 2+) HELIX 1 AA1 ASP A 32 ASP A 47 1 16 HELIX 2 AA2 ASP A 47 LYS A 52 1 6 HELIX 3 AA3 ASP A 83 LYS A 94 1 12 HELIX 4 AA4 GLY A 95 ARG A 97 5 3 HELIX 5 AA5 HIS A 295 GLN A 309 1 15 HELIX 6 AA6 SER A 321 TYR A 326 5 6 HELIX 7 AA7 SER A 368 ALA A 372 5 5 HELIX 8 AA8 GLY A 380 GLU A 393 1 14 HELIX 9 AA9 GLU A 395 GLU A 399 5 5 HELIX 10 AB1 PHE A 413 GLY A 424 1 12 HELIX 11 AB2 LEU A 448 ASN A 455 1 8 HELIX 12 AB3 LYS A 476 GLN A 492 1 17 HELIX 13 AB4 TYR A 493 GLY A 498 1 6 HELIX 14 AB5 LEU A 512 GLU A 529 1 18 HELIX 15 AB6 ASP A 532 GLN A 538 1 7 HELIX 16 AB7 MET A 545 ASN A 550 1 6 HELIX 17 AB8 PHE A 558 HIS A 563 1 6 HELIX 18 AB9 ALA A 567 LEU A 572 1 6 HELIX 19 AC1 ASP B 32 ASP B 47 1 16 HELIX 20 AC2 ASP B 47 LYS B 52 1 6 HELIX 21 AC3 ASP B 83 VAL B 93 1 11 HELIX 22 AC4 HIS B 295 PHE B 307 1 13 HELIX 23 AC5 SER B 321 TYR B 326 5 6 HELIX 24 AC6 LYS B 359 SER B 367 1 9 HELIX 25 AC7 GLY B 380 GLU B 395 1 16 HELIX 26 AC8 PRO B 396 GLY B 402 1 7 HELIX 27 AC9 PHE B 413 GLY B 424 1 12 HELIX 28 AD1 LEU B 448 GLY B 458 1 11 HELIX 29 AD2 LYS B 476 TYR B 493 1 18 HELIX 30 AD3 TYR B 493 GLU B 503 1 11 HELIX 31 AD4 ASP B 511 SER B 518 1 8 HELIX 32 AD5 MET B 524 GLU B 529 1 6 HELIX 33 AD6 ASP B 532 SER B 540 1 9 HELIX 34 AD7 HIS B 563 LYS B 565 5 3 HELIX 35 AD8 PHE B 566 GLY B 574 1 9 HELIX 36 AD9 ASP C 32 ASP C 47 1 16 HELIX 37 AE1 ASP C 47 LYS C 52 1 6 HELIX 38 AE2 ASP C 83 LYS C 94 1 12 HELIX 39 AE3 GLY C 95 ARG C 97 5 3 HELIX 40 AE4 HIS C 295 GLN C 309 1 15 HELIX 41 AE5 SER C 321 TYR C 326 5 6 HELIX 42 AE6 SER C 368 ALA C 372 5 5 HELIX 43 AE7 GLY C 380 LEU C 391 1 12 HELIX 44 AE8 GLU C 397 GLY C 402 1 6 HELIX 45 AE9 PHE C 413 GLY C 424 1 12 HELIX 46 AF1 LEU C 448 GLY C 458 1 11 HELIX 47 AF2 LYS C 476 GLN C 492 1 17 HELIX 48 AF3 TYR C 493 LEU C 501 1 9 HELIX 49 AF4 ASP C 511 LEU C 516 1 6 HELIX 50 AF5 LEU C 516 GLY C 521 1 6 HELIX 51 AF6 SER C 523 PHE C 528 1 6 HELIX 52 AF7 ASP C 532 LYS C 539 1 8 HELIX 53 AF8 ASN C 544 ASN C 551 1 8 HELIX 54 AF9 LEU C 569 GLY C 574 1 6 HELIX 55 AG1 ASP D 32 ASP D 47 1 16 HELIX 56 AG2 ASP D 47 LYS D 52 1 6 HELIX 57 AG3 ASP D 83 SER D 91 1 9 HELIX 58 AG4 SER D 297 GLU D 308 1 12 HELIX 59 AG5 SER D 321 TYR D 326 5 6 HELIX 60 AG6 LYS D 359 SER D 367 1 9 HELIX 61 AG7 GLY D 380 GLU D 393 1 14 HELIX 62 AG8 GLU D 397 GLY D 402 1 6 HELIX 63 AG9 PHE D 413 GLY D 424 1 12 HELIX 64 AH1 LEU D 448 GLY D 458 1 11 HELIX 65 AH2 GLY D 475 ILE D 489 1 15 HELIX 66 AH3 TYR D 493 LEU D 501 1 9 HELIX 67 AH4 ASP D 511 LEU D 516 1 6 HELIX 68 AH5 LEU D 516 GLY D 521 1 6 HELIX 69 AH6 SER D 523 GLU D 529 1 7 HELIX 70 AH7 ASP D 532 SER D 540 1 9 HELIX 71 AH8 SER D 540 VAL D 546 1 7 HELIX 72 AH9 HIS D 563 LYS D 565 5 3 HELIX 73 AI1 PHE D 566 GLY D 574 1 9 SHEET 1 AA1 6 VAL A 17 ASN A 20 0 SHEET 2 AA1 6 ASN A 5 ILE A 8 -1 N ILE A 6 O ILE A 19 SHEET 3 AA1 6 ILE A 71 THR A 74 -1 O ILE A 72 N THR A 7 SHEET 4 AA1 6 TYR A 106 GLU A 110 -1 O ILE A 107 N LEU A 73 SHEET 5 AA1 6 ILE A 123 GLY A 127 -1 O LYS A 125 N ALA A 108 SHEET 6 AA1 6 ILE A 134 ASP A 135 -1 O ILE A 134 N TRP A 126 SHEET 1 AA2 6 PHE A 149 ILE A 154 0 SHEET 2 AA2 6 ILE A 282 GLU A 288 1 O ILE A 284 N LYS A 150 SHEET 3 AA2 6 PHE A 315 SER A 318 1 O SER A 318 N ILE A 287 SHEET 4 AA2 6 ASN A 25 PHE A 28 1 N ILE A 27 O LEU A 317 SHEET 5 AA2 6 THR A 331 VAL A 336 1 O ILE A 334 N VAL A 26 SHEET 6 AA2 6 CYS A 344 TYR A 349 -1 O TYR A 349 N THR A 331 SHEET 1 AA3 4 GLY A 403 GLU A 407 0 SHEET 2 AA3 4 ARG A 374 ILE A 378 1 N LEU A 376 O LEU A 406 SHEET 3 AA3 4 THR A 426 THR A 431 1 O ILE A 428 N LEU A 377 SHEET 4 AA3 4 ILE A 505 LEU A 507 1 O TYR A 506 N ILE A 429 SHEET 1 AA4 3 LEU A 435 SER A 437 0 SHEET 2 AA4 3 VAL A 444 LEU A 447 -1 O GLU A 446 N LYS A 436 SHEET 3 AA4 3 ILE A 465 THR A 466 -1 O ILE A 465 N TYR A 445 SHEET 1 AA5 6 VAL B 17 ASN B 20 0 SHEET 2 AA5 6 ASN B 5 ILE B 8 -1 N ILE B 6 O ILE B 19 SHEET 3 AA5 6 ILE B 71 THR B 74 -1 O THR B 74 N ASN B 5 SHEET 4 AA5 6 TYR B 106 GLU B 110 -1 O ILE B 107 N LEU B 73 SHEET 5 AA5 6 ILE B 123 GLY B 127 -1 O ILE B 123 N GLU B 110 SHEET 6 AA5 6 ILE B 134 ASP B 135 -1 O ILE B 134 N TRP B 126 SHEET 1 AA6 6 PHE B 149 ILE B 154 0 SHEET 2 AA6 6 ILE B 282 GLU B 288 1 O ILE B 282 N LYS B 150 SHEET 3 AA6 6 TYR B 314 SER B 318 1 O TYR B 314 N TYR B 285 SHEET 4 AA6 6 ASN B 25 GLY B 29 1 N ILE B 27 O LEU B 317 SHEET 5 AA6 6 THR B 331 VAL B 336 1 O VAL B 336 N PHE B 28 SHEET 6 AA6 6 CYS B 344 TYR B 349 -1 O HIS B 347 N LEU B 333 SHEET 1 AA7 4 GLY B 403 GLU B 407 0 SHEET 2 AA7 4 ARG B 374 ILE B 378 1 N LEU B 376 O LEU B 406 SHEET 3 AA7 4 THR B 426 ASP B 432 1 O ILE B 428 N LEU B 377 SHEET 4 AA7 4 ILE B 505 SER B 508 1 O TYR B 506 N ILE B 429 SHEET 1 AA8 3 LEU B 435 SER B 437 0 SHEET 2 AA8 3 VAL B 444 LEU B 447 -1 O GLU B 446 N LYS B 436 SHEET 3 AA8 3 ILE B 465 THR B 466 -1 O ILE B 465 N TYR B 445 SHEET 1 AA9 6 VAL C 17 ASN C 20 0 SHEET 2 AA9 6 ASN C 5 ILE C 8 -1 N ILE C 6 O ILE C 19 SHEET 3 AA9 6 ILE C 71 THR C 74 -1 O ILE C 72 N THR C 7 SHEET 4 AA9 6 TYR C 106 GLU C 110 -1 O ILE C 107 N LEU C 73 SHEET 5 AA9 6 ILE C 123 GLY C 127 -1 O LYS C 125 N ALA C 108 SHEET 6 AA9 6 ILE C 134 ASP C 135 -1 O ILE C 134 N TRP C 126 SHEET 1 AB1 6 PHE C 149 ILE C 154 0 SHEET 2 AB1 6 ILE C 282 GLU C 288 1 O ILE C 284 N LYS C 150 SHEET 3 AB1 6 TYR C 314 SER C 318 1 O TYR C 314 N TYR C 285 SHEET 4 AB1 6 ASN C 25 GLY C 29 1 N ILE C 27 O LEU C 317 SHEET 5 AB1 6 THR C 331 VAL C 336 1 O ILE C 334 N VAL C 26 SHEET 6 AB1 6 CYS C 344 TYR C 349 -1 O HIS C 347 N LEU C 333 SHEET 1 AB2 4 GLY C 403 GLU C 407 0 SHEET 2 AB2 4 ARG C 374 ILE C 378 1 N LEU C 376 O LEU C 406 SHEET 3 AB2 4 THR C 426 THR C 431 1 O ILE C 428 N LEU C 377 SHEET 4 AB2 4 ILE C 505 LEU C 507 1 O TYR C 506 N THR C 431 SHEET 1 AB3 3 LEU C 435 SER C 437 0 SHEET 2 AB3 3 VAL C 444 LEU C 447 -1 O GLU C 446 N LYS C 436 SHEET 3 AB3 3 ILE C 465 THR C 466 -1 O ILE C 465 N TYR C 445 SHEET 1 AB4 6 VAL D 17 ASN D 20 0 SHEET 2 AB4 6 ASN D 5 ILE D 8 -1 N ILE D 6 O ILE D 19 SHEET 3 AB4 6 ILE D 71 THR D 74 -1 O THR D 74 N ASN D 5 SHEET 4 AB4 6 TYR D 106 SER D 111 -1 O ILE D 107 N LEU D 73 SHEET 5 AB4 6 ILE D 122 GLY D 127 -1 O LYS D 125 N ALA D 108 SHEET 6 AB4 6 ILE D 134 ASP D 135 -1 O ILE D 134 N TRP D 126 SHEET 1 AB5 6 PHE D 149 ILE D 154 0 SHEET 2 AB5 6 ILE D 282 GLU D 288 1 O ILE D 282 N LYS D 150 SHEET 3 AB5 6 PHE D 316 SER D 318 1 O SER D 318 N ILE D 287 SHEET 4 AB5 6 ASN D 25 GLY D 29 1 N ILE D 27 O LEU D 317 SHEET 5 AB5 6 THR D 331 VAL D 336 1 O VAL D 336 N PHE D 28 SHEET 6 AB5 6 CYS D 344 TYR D 349 -1 O HIS D 347 N LEU D 333 SHEET 1 AB6 4 GLY D 403 GLU D 407 0 SHEET 2 AB6 4 ARG D 374 ILE D 378 1 N LEU D 376 O PHE D 404 SHEET 3 AB6 4 THR D 426 THR D 431 1 O ILE D 428 N LEU D 377 SHEET 4 AB6 4 ILE D 505 LEU D 507 1 O TYR D 506 N THR D 431 SHEET 1 AB7 2 LEU D 435 SER D 437 0 SHEET 2 AB7 2 TYR D 445 LEU D 447 -1 O GLU D 446 N LYS D 436 LINK OD2 ASP A 432 CA CA A1001 1555 1555 2.74 LINK CA CA A1001 OP1 DC E 11 1555 1555 2.55 LINK OE2 GLU B 379 CA CA B1001 1555 1555 3.18 LINK OD2 ASP B 432 CA CA B1001 1555 1555 2.47 LINK CA CA B1001 OP1 DG F 11 1555 1555 2.47 LINK OD2 ASP C 432 CA CA C1001 1555 1555 2.68 LINK OD1 ASP C 511 CA CA C1001 1555 1555 2.74 LINK CA CA C1001 OP1 DC G 11 1555 1555 2.52 LINK OE2 GLU D 379 CA CA D1001 1555 1555 2.70 LINK OD2 ASP D 432 CA CA D1001 1555 1555 2.53 LINK CA CA D1001 OP1 DG H 11 1555 1555 2.47 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000