HEADER TRANSFERASE 07-NOV-23 8X1G TITLE HUMAN ADENYLATE KINASE 1 (HAK1) MUTANT-R97W COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLATE KINASE ISOENZYME 1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ADENYLATE KINASE, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.YU REVDAT 1 13-NOV-24 8X1G 0 JRNL AUTH J.YU JRNL TITL STRUCTURE OF HUMAN ADENYLATE KINASE 1 MUTANT-R97W. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA2ALPHA CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8X1G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1300042256. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.2 REMARK 210 IONIC STRENGTH : 160 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.88 MM [U-99% 15N] 15N_R97W, REMARK 210 90% H2O/10% D2O; 0.88 MM [U-99% REMARK 210 13C; U-99% 15N] 15N_13C_R97W10% REMARK 210 D2O, 90% H2O/10% D2O; 0.88 MM [U- REMARK 210 99% 13C; U-99% 15N] 15N_13C_ REMARK 210 R97W99% D2O, 99% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCACB; 3D CBCA(CO)NH; 3D REMARK 210 HN(CO)CA; 3D HNCO; 3D HN(CA)CO; REMARK 210 3D H(CCO)NH; 3D CC(CO)NH; 3D REMARK 210 HBHA(CO)NH; 3D HCCH-TOCSY; 3D REMARK 210 CCH-TOCSY; 3D 15N-EDITED NOESY- REMARK 210 HSQC; 3D 13C-EDITED NOESY-HSQC; REMARK 210 (HB)CB(CGCD)HD; (HB)CB(CGCDCE)HE REMARK 210 SPECTROMETER FIELD STRENGTH : 850 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRFAM-SPARKY, ARIA2ALPHA CNS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 300 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 51 -19.63 -42.74 REMARK 500 1 GLN A 65 -154.72 -70.84 REMARK 500 1 ALA A 82 -7.56 -57.81 REMARK 500 1 TYR A 95 138.42 64.73 REMARK 500 1 PRO A 96 -75.64 -63.76 REMARK 500 1 TRP A 97 -77.79 -154.77 REMARK 500 1 VAL A 99 -93.89 -100.58 REMARK 500 1 GLN A 100 9.45 59.51 REMARK 500 1 GLN A 101 -57.76 -143.42 REMARK 500 1 GLU A 103 87.31 -69.72 REMARK 500 1 GLU A 104 -59.04 -169.30 REMARK 500 1 VAL A 118 99.38 -69.50 REMARK 500 1 ASP A 141 13.40 -65.31 REMARK 500 1 ASN A 142 43.15 -84.37 REMARK 500 1 GLU A 143 -22.84 -36.93 REMARK 500 1 GLU A 176 20.39 -62.73 REMARK 500 2 ALA A 82 -7.18 -57.04 REMARK 500 2 TYR A 95 139.38 60.31 REMARK 500 2 PRO A 96 -74.89 -57.94 REMARK 500 2 TRP A 97 -76.84 -169.80 REMARK 500 2 VAL A 99 -77.07 -114.33 REMARK 500 2 GLN A 100 26.59 41.63 REMARK 500 2 GLN A 101 -53.07 -148.20 REMARK 500 2 GLU A 104 -54.17 -145.86 REMARK 500 2 VAL A 118 97.62 -68.62 REMARK 500 2 ASP A 141 13.31 -64.63 REMARK 500 2 ASN A 142 43.74 -82.36 REMARK 500 2 GLU A 143 -22.12 -37.16 REMARK 500 2 GLU A 176 20.15 -63.02 REMARK 500 3 PRO A 68 119.36 -37.86 REMARK 500 3 ALA A 82 -7.16 -56.16 REMARK 500 3 GLU A 98 97.80 -59.84 REMARK 500 3 VAL A 99 -91.07 -132.41 REMARK 500 3 GLN A 111 119.41 -166.07 REMARK 500 3 VAL A 118 98.16 -67.77 REMARK 500 3 ASP A 141 13.66 -66.16 REMARK 500 3 ASN A 142 43.11 -88.26 REMARK 500 3 GLU A 143 -22.60 -37.10 REMARK 500 3 ASN A 174 78.63 -106.75 REMARK 500 3 GLU A 176 20.31 -63.06 REMARK 500 3 SER A 178 -178.15 -67.85 REMARK 500 4 VAL A 14 -166.41 -175.04 REMARK 500 4 LYS A 31 -61.35 -90.47 REMARK 500 4 ALA A 82 -8.56 -57.77 REMARK 500 4 LYS A 83 -18.30 -141.05 REMARK 500 4 PRO A 96 105.12 -53.62 REMARK 500 4 VAL A 99 -80.22 -90.84 REMARK 500 4 GLU A 104 121.83 61.64 REMARK 500 4 GLN A 111 115.02 -165.54 REMARK 500 4 ARG A 138 -165.04 -78.53 REMARK 500 REMARK 500 THIS ENTRY HAS 273 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36611 RELATED DB: BMRB REMARK 900 HUMAN ADENYLATE KINASE 1 (HAK1) MUTANT-R97W DBREF 8X1G A 1 194 UNP P00568 KAD1_HUMAN 1 194 SEQADV 8X1G TRP A 97 UNP P00568 ARG 97 ENGINEERED MUTATION SEQRES 1 A 194 MET GLU GLU LYS LEU LYS LYS THR LYS ILE ILE PHE VAL SEQRES 2 A 194 VAL GLY GLY PRO GLY SER GLY LYS GLY THR GLN CYS GLU SEQRES 3 A 194 LYS ILE VAL GLN LYS TYR GLY TYR THR HIS LEU SER THR SEQRES 4 A 194 GLY ASP LEU LEU ARG SER GLU VAL SER SER GLY SER ALA SEQRES 5 A 194 ARG GLY LYS LYS LEU SER GLU ILE MET GLU LYS GLY GLN SEQRES 6 A 194 LEU VAL PRO LEU GLU THR VAL LEU ASP MET LEU ARG ASP SEQRES 7 A 194 ALA MET VAL ALA LYS VAL ASN THR SER LYS GLY PHE LEU SEQRES 8 A 194 ILE ASP GLY TYR PRO TRP GLU VAL GLN GLN GLY GLU GLU SEQRES 9 A 194 PHE GLU ARG ARG ILE GLY GLN PRO THR LEU LEU LEU TYR SEQRES 10 A 194 VAL ASP ALA GLY PRO GLU THR MET THR GLN ARG LEU LEU SEQRES 11 A 194 LYS ARG GLY GLU THR SER GLY ARG VAL ASP ASP ASN GLU SEQRES 12 A 194 GLU THR ILE LYS LYS ARG LEU GLU THR TYR TYR LYS ALA SEQRES 13 A 194 THR GLU PRO VAL ILE ALA PHE TYR GLU LYS ARG GLY ILE SEQRES 14 A 194 VAL ARG LYS VAL ASN ALA GLU GLY SER VAL ASP SER VAL SEQRES 15 A 194 PHE SER GLN VAL CYS THR HIS LEU ASP ALA LEU LYS HELIX 1 AA1 MET A 1 THR A 8 1 8 HELIX 2 AA2 GLY A 20 TYR A 32 1 13 HELIX 3 AA3 THR A 39 SER A 45 1 7 HELIX 4 AA4 GLU A 46 GLY A 64 1 19 HELIX 5 AA5 GLU A 70 ASN A 85 1 16 HELIX 6 AA6 THR A 124 GLU A 134 1 11 HELIX 7 AA7 THR A 135 GLY A 137 5 3 HELIX 8 AA8 THR A 145 ARG A 167 1 23 HELIX 9 AA9 SER A 178 LYS A 194 1 17 SHEET 1 AA1 5 THR A 35 SER A 38 0 SHEET 2 AA1 5 GLY A 89 ASP A 93 1 O LEU A 91 N THR A 35 SHEET 3 AA1 5 LYS A 9 GLY A 15 1 N ILE A 11 O PHE A 90 SHEET 4 AA1 5 LEU A 114 VAL A 118 1 O LEU A 116 N PHE A 12 SHEET 5 AA1 5 VAL A 170 VAL A 173 1 O ARG A 171 N LEU A 115 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 TER 3081 LYS A 194 ENDMDL MODEL 2 TER 3081 LYS A 194 ENDMDL MODEL 3 TER 3081 LYS A 194 ENDMDL MODEL 4 TER 3081 LYS A 194 ENDMDL MODEL 5 TER 3081 LYS A 194 ENDMDL MODEL 6 TER 3081 LYS A 194 ENDMDL MODEL 7 TER 3081 LYS A 194 ENDMDL MODEL 8 TER 3081 LYS A 194 ENDMDL MODEL 9 TER 3081 LYS A 194 ENDMDL MODEL 10 TER 3081 LYS A 194 ENDMDL MODEL 11 TER 3081 LYS A 194 ENDMDL MODEL 12 TER 3081 LYS A 194 ENDMDL MODEL 13 TER 3081 LYS A 194 ENDMDL MODEL 14 TER 3081 LYS A 194 ENDMDL MODEL 15 TER 3081 LYS A 194 ENDMDL MODEL 16 TER 3081 LYS A 194 ENDMDL MODEL 17 TER 3081 LYS A 194 ENDMDL MODEL 18 TER 3081 LYS A 194 ENDMDL MODEL 19 TER 3081 LYS A 194 ENDMDL MODEL 20 TER 3081 LYS A 194 ENDMDL MASTER 151 0 0 9 5 0 0 6 1520 1 0 15 END