HEADER TRANSFERASE 11-DEC-23 8XE3 TITLE NORBELLADINE 4'-O-METHYLTRANSFERASE COMPLEXED WITH MG AND SAH COMPND MOL_ID: 1; COMPND 2 MOLECULE: NORBELLADINE 4'-O-METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NARCISSUS PSEUDONARCISSUS MK-2014; SOURCE 3 ORGANISM_COMMON: DAFFODIL; SOURCE 4 ORGANISM_TAXID: 1540222; SOURCE 5 GENE: N4OMT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI M15; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 1007065 KEYWDS O-METHYLTRANSFERASE FAMILY PROTEIN, NPN4OMT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.Y.H.SAW,Y.NAKASHIMA,H.MORITA REVDAT 1 07-AUG-24 8XE3 0 JRNL AUTH S.Y.Y.HNIN,Y.NAKASHIMA,T.KODAMA,H.MORITA JRNL TITL STRUCTURE-BASED CATALYTIC MECHANISM OF AMARYLLIDACEAE JRNL TITL 2 O-METHYLTRANSFERASES JRNL REF ACS CATALYSIS 11865 2024 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/ACSCATAL.4C03305 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.910 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 92520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 4560 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.9200 - 5.3400 0.99 2965 179 0.1587 0.1772 REMARK 3 2 5.3400 - 4.2400 1.00 2993 148 0.1307 0.1619 REMARK 3 3 4.2400 - 3.7100 1.00 3007 135 0.1274 0.1835 REMARK 3 4 3.7000 - 3.3700 1.00 2985 159 0.1405 0.1798 REMARK 3 5 3.3700 - 3.1300 0.99 2953 152 0.1545 0.2168 REMARK 3 6 3.1300 - 2.9400 0.98 2922 167 0.1706 0.2178 REMARK 3 7 2.9400 - 2.7900 0.99 2953 174 0.1634 0.2215 REMARK 3 8 2.7900 - 2.6700 0.99 2994 129 0.1615 0.1947 REMARK 3 9 2.6700 - 2.5700 0.98 2917 152 0.1570 0.1875 REMARK 3 10 2.5700 - 2.4800 0.98 2932 159 0.1562 0.2289 REMARK 3 11 2.4800 - 2.4000 0.99 3009 115 0.1633 0.2248 REMARK 3 12 2.4000 - 2.3300 0.99 2971 152 0.1642 0.1740 REMARK 3 13 2.3300 - 2.2700 0.99 2968 137 0.1563 0.2017 REMARK 3 14 2.2700 - 2.2200 0.98 2975 152 0.1563 0.1708 REMARK 3 15 2.2200 - 2.1700 0.98 2851 178 0.1578 0.1588 REMARK 3 16 2.1700 - 2.1200 0.98 2993 133 0.1572 0.2100 REMARK 3 17 2.1200 - 2.0800 0.98 2914 147 0.1604 0.1933 REMARK 3 18 2.0800 - 2.0400 0.98 2983 136 0.1753 0.2129 REMARK 3 19 2.0400 - 2.0000 0.98 2883 159 0.1650 0.2090 REMARK 3 20 2.0000 - 1.9700 0.97 2905 164 0.1755 0.1845 REMARK 3 21 1.9700 - 1.9400 0.98 2943 162 0.1740 0.2177 REMARK 3 22 1.9400 - 1.9100 0.98 2877 172 0.1973 0.2275 REMARK 3 23 1.9100 - 1.8800 0.97 2929 153 0.1922 0.2435 REMARK 3 24 1.8800 - 1.8500 0.97 2890 177 0.2003 0.2165 REMARK 3 25 1.8500 - 1.8300 0.97 2863 164 0.2039 0.2498 REMARK 3 26 1.8300 - 1.8000 0.96 2931 146 0.2177 0.2657 REMARK 3 27 1.8000 - 1.7800 0.97 2865 151 0.2169 0.2409 REMARK 3 28 1.7800 - 1.7600 0.96 2901 132 0.2381 0.2608 REMARK 3 29 1.7600 - 1.7400 0.96 2867 156 0.2556 0.2862 REMARK 3 30 1.7400 - 1.7200 0.92 2821 120 0.2630 0.3201 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.165 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.856 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4094 REMARK 3 ANGLE : 1.037 5586 REMARK 3 CHIRALITY : 0.062 625 REMARK 3 PLANARITY : 0.006 718 REMARK 3 DIHEDRAL : 18.582 597 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8XE3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-DEC-23. REMARK 100 THE DEPOSITION ID IS D_1300043251. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05200 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 92520 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 46.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.82900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG 8000, 0.2M MGCL2, 0.1M REMARK 280 TRIS-HCL (PH 8.0), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.04800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.88550 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.04800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 57.88550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 GLY B 2 REMARK 465 ALA B 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 5 CG1 CG2 CD1 REMARK 470 GLU A 36 CD OE1 OE2 REMARK 470 LYS A 73 CD CE NZ REMARK 470 GLU B 36 CD OE1 OE2 REMARK 470 LYS B 73 CD CE NZ REMARK 470 LYS B 98 CE NZ REMARK 470 GLU B 141 CG CD OE1 OE2 REMARK 470 LYS B 144 CG CD CE NZ REMARK 470 GLU B 145 CD OE1 OE2 REMARK 470 GLU B 146 CG CD OE1 OE2 REMARK 470 ASP B 147 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 626 O HOH A 714 1.97 REMARK 500 O HOH B 622 O HOH B 643 2.12 REMARK 500 O HOH B 791 O HOH B 802 2.14 REMARK 500 OE1 GLU B 110 O HOH B 601 2.19 REMARK 500 OE2 GLU A 141 O HOH A 601 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 760 O HOH A 788 2555 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 30 -61.02 -105.79 REMARK 500 TYR A 81 -131.35 53.12 REMARK 500 ASP A 155 38.06 -153.52 REMARK 500 ALA A 156 -131.81 -103.85 REMARK 500 TRP A 185 57.90 39.97 REMARK 500 LYS B 73 -34.72 -131.43 REMARK 500 LYS B 73 -30.85 -131.71 REMARK 500 TYR B 81 -129.77 55.13 REMARK 500 ASP B 155 34.29 -155.35 REMARK 500 ALA B 156 -130.21 -103.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP B 6 ASP B 7 133.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 811 DISTANCE = 5.89 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 155 OD1 REMARK 620 2 ASP A 155 OD2 52.6 REMARK 620 3 ASP A 181 OD2 97.4 83.2 REMARK 620 4 ASN A 182 OD1 94.4 145.3 92.2 REMARK 620 5 HOH A 626 O 123.5 72.8 88.6 141.7 REMARK 620 6 HOH A 695 O 82.4 92.8 175.1 92.7 87.4 REMARK 620 7 HOH A 714 O 176.9 126.0 85.0 87.5 54.4 95.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 155 OD1 REMARK 620 2 ASP B 155 OD2 52.6 REMARK 620 3 ASP B 181 OD2 96.8 85.3 REMARK 620 4 ASN B 182 OD1 97.6 148.8 90.3 REMARK 620 5 HOH B 622 O 125.4 74.7 91.2 136.3 REMARK 620 6 HOH B 643 O 176.1 131.3 83.9 78.6 58.3 REMARK 620 7 HOH B 692 O 86.4 93.4 174.7 93.4 83.5 93.2 REMARK 620 N 1 2 3 4 5 6 DBREF1 8XE3 A 1 239 UNP NOMT_NARAP DBREF2 8XE3 A A0A077EWA5 1 239 DBREF1 8XE3 B 1 239 UNP NOMT_NARAP DBREF2 8XE3 B A0A077EWA5 1 239 SEQADV 8XE3 GLY A -2 UNP A0A077EWA EXPRESSION TAG SEQADV 8XE3 PRO A -1 UNP A0A077EWA EXPRESSION TAG SEQADV 8XE3 GLY A 0 UNP A0A077EWA EXPRESSION TAG SEQADV 8XE3 GLY B -2 UNP A0A077EWA EXPRESSION TAG SEQADV 8XE3 PRO B -1 UNP A0A077EWA EXPRESSION TAG SEQADV 8XE3 GLY B 0 UNP A0A077EWA EXPRESSION TAG SEQRES 1 A 242 GLY PRO GLY MET GLY ALA SER ILE ASP ASP TYR SER LEU SEQRES 2 A 242 VAL HIS LYS ASN ILE LEU HIS SER GLU ASP LEU LEU LYS SEQRES 3 A 242 TYR ILE LEU GLU THR SER ALA TYR PRO ARG GLU HIS GLU SEQRES 4 A 242 GLN LEU LYS GLY LEU ARG GLU VAL THR GLU LYS HIS GLU SEQRES 5 A 242 TRP SER SER ALA LEU VAL PRO ALA ASP GLU GLY LEU PHE SEQRES 6 A 242 LEU SER MET LEU LEU LYS LEU MET ASN ALA LYS ARG THR SEQRES 7 A 242 ILE GLU ILE GLY VAL TYR THR GLY TYR SER LEU LEU THR SEQRES 8 A 242 THR ALA LEU ALA LEU PRO GLU ASP GLY LYS ILE THR ALA SEQRES 9 A 242 ILE ASP VAL ASN LYS SER TYR TYR GLU ILE GLY LEU PRO SEQRES 10 A 242 PHE ILE GLN LYS ALA GLY VAL GLU HIS LYS ILE ASN PHE SEQRES 11 A 242 ILE GLU SER GLU ALA LEU PRO VAL LEU ASP GLN MET LEU SEQRES 12 A 242 GLU GLU MET LYS GLU GLU ASP LEU TYR ASP TYR ALA PHE SEQRES 13 A 242 VAL ASP ALA ASP LYS SER ASN TYR ALA ASN TYR HIS GLU SEQRES 14 A 242 ARG LEU VAL LYS LEU VAL ARG ILE GLY GLY ALA ILE LEU SEQRES 15 A 242 TYR ASP ASN THR LEU TRP TYR GLY SER VAL ALA TYR PRO SEQRES 16 A 242 GLU TYR PRO GLY LEU HIS PRO GLU GLU GLU VAL ALA ARG SEQRES 17 A 242 LEU SER PHE ARG ASN LEU ASN THR PHE LEU ALA ALA ASP SEQRES 18 A 242 PRO ARG VAL GLU ILE SER GLN VAL SER ILE GLY ASP GLY SEQRES 19 A 242 VAL THR ILE CYS ARG ARG LEU TYR SEQRES 1 B 242 GLY PRO GLY MET GLY ALA SER ILE ASP ASP TYR SER LEU SEQRES 2 B 242 VAL HIS LYS ASN ILE LEU HIS SER GLU ASP LEU LEU LYS SEQRES 3 B 242 TYR ILE LEU GLU THR SER ALA TYR PRO ARG GLU HIS GLU SEQRES 4 B 242 GLN LEU LYS GLY LEU ARG GLU VAL THR GLU LYS HIS GLU SEQRES 5 B 242 TRP SER SER ALA LEU VAL PRO ALA ASP GLU GLY LEU PHE SEQRES 6 B 242 LEU SER MET LEU LEU LYS LEU MET ASN ALA LYS ARG THR SEQRES 7 B 242 ILE GLU ILE GLY VAL TYR THR GLY TYR SER LEU LEU THR SEQRES 8 B 242 THR ALA LEU ALA LEU PRO GLU ASP GLY LYS ILE THR ALA SEQRES 9 B 242 ILE ASP VAL ASN LYS SER TYR TYR GLU ILE GLY LEU PRO SEQRES 10 B 242 PHE ILE GLN LYS ALA GLY VAL GLU HIS LYS ILE ASN PHE SEQRES 11 B 242 ILE GLU SER GLU ALA LEU PRO VAL LEU ASP GLN MET LEU SEQRES 12 B 242 GLU GLU MET LYS GLU GLU ASP LEU TYR ASP TYR ALA PHE SEQRES 13 B 242 VAL ASP ALA ASP LYS SER ASN TYR ALA ASN TYR HIS GLU SEQRES 14 B 242 ARG LEU VAL LYS LEU VAL ARG ILE GLY GLY ALA ILE LEU SEQRES 15 B 242 TYR ASP ASN THR LEU TRP TYR GLY SER VAL ALA TYR PRO SEQRES 16 B 242 GLU TYR PRO GLY LEU HIS PRO GLU GLU GLU VAL ALA ARG SEQRES 17 B 242 LEU SER PHE ARG ASN LEU ASN THR PHE LEU ALA ALA ASP SEQRES 18 B 242 PRO ARG VAL GLU ILE SER GLN VAL SER ILE GLY ASP GLY SEQRES 19 B 242 VAL THR ILE CYS ARG ARG LEU TYR HET GOL A 501 6 HET GOL A 502 6 HET MG A 503 1 HET SAH A 504 26 HET GOL B 501 6 HET MG B 502 1 HET SAH B 503 26 HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 3(C3 H8 O3) FORMUL 5 MG 2(MG 2+) FORMUL 6 SAH 2(C14 H20 N6 O5 S) FORMUL 10 HOH *401(H2 O) HELIX 1 AA1 SER A 4 TYR A 8 5 5 HELIX 2 AA2 SER A 18 ALA A 30 1 13 HELIX 3 AA3 TYR A 31 GLU A 34 5 4 HELIX 4 AA4 HIS A 35 LYS A 47 1 13 HELIX 5 AA5 TRP A 50 LEU A 54 5 5 HELIX 6 AA6 PRO A 56 MET A 70 1 15 HELIX 7 AA7 GLY A 83 LEU A 93 1 11 HELIX 8 AA8 ASN A 105 ALA A 119 1 15 HELIX 9 AA9 VAL A 121 HIS A 123 5 3 HELIX 10 AB1 GLU A 131 MET A 143 1 13 HELIX 11 AB2 LYS A 144 LEU A 148 5 5 HELIX 12 AB3 ASP A 157 SER A 159 5 3 HELIX 13 AB4 ASN A 160 LEU A 171 1 12 HELIX 14 AB5 LEU A 184 TYR A 191 5 8 HELIX 15 AB6 HIS A 198 ASP A 218 1 21 HELIX 16 AB7 SER B 18 ALA B 30 1 13 HELIX 17 AB8 TYR B 31 GLU B 34 5 4 HELIX 18 AB9 HIS B 35 GLU B 46 1 12 HELIX 19 AC1 TRP B 50 LEU B 54 5 5 HELIX 20 AC2 PRO B 56 MET B 70 1 15 HELIX 21 AC3 GLY B 83 LEU B 93 1 11 HELIX 22 AC4 ASN B 105 ALA B 119 1 15 HELIX 23 AC5 VAL B 121 HIS B 123 5 3 HELIX 24 AC6 GLU B 131 MET B 143 1 13 HELIX 25 AC7 LYS B 144 LEU B 148 5 5 HELIX 26 AC8 ASN B 160 LEU B 171 1 12 HELIX 27 AC9 LEU B 184 TYR B 191 5 8 HELIX 28 AD1 HIS B 198 ASP B 218 1 21 SHEET 1 AA1 7 ILE A 125 GLU A 129 0 SHEET 2 AA1 7 LYS A 98 ASP A 103 1 N ALA A 101 O ILE A 128 SHEET 3 AA1 7 ARG A 74 ILE A 78 1 N GLU A 77 O THR A 100 SHEET 4 AA1 7 TYR A 149 VAL A 154 1 O PHE A 153 N ILE A 78 SHEET 5 AA1 7 VAL A 172 ASP A 181 1 O LEU A 179 N ALA A 152 SHEET 6 AA1 7 VAL A 232 ARG A 237 -1 O ARG A 237 N GLY A 175 SHEET 7 AA1 7 VAL A 221 VAL A 226 -1 N VAL A 226 O VAL A 232 SHEET 1 AA2 7 ILE B 125 GLU B 129 0 SHEET 2 AA2 7 LYS B 98 ASP B 103 1 N ALA B 101 O ILE B 128 SHEET 3 AA2 7 ARG B 74 ILE B 78 1 N GLU B 77 O ILE B 102 SHEET 4 AA2 7 TYR B 149 VAL B 154 1 O ASP B 150 N ARG B 74 SHEET 5 AA2 7 VAL B 172 ASP B 181 1 O LEU B 179 N VAL B 154 SHEET 6 AA2 7 VAL B 232 ARG B 237 -1 O THR B 233 N TYR B 180 SHEET 7 AA2 7 VAL B 221 VAL B 226 -1 N VAL B 226 O VAL B 232 LINK OD1 ASP A 155 MG MG A 503 1555 1555 2.07 LINK OD2 ASP A 155 MG MG A 503 1555 1555 2.71 LINK OD2 ASP A 181 MG MG A 503 1555 1555 1.99 LINK OD1 ASN A 182 MG MG A 503 1555 1555 1.96 LINK MG MG A 503 O HOH A 626 1555 1555 1.99 LINK MG MG A 503 O HOH A 695 1555 1555 2.19 LINK MG MG A 503 O HOH A 714 1555 1555 2.29 LINK OD1 ASP B 155 MG MG B 502 1555 1555 2.01 LINK OD2 ASP B 155 MG MG B 502 1555 1555 2.72 LINK OD2 ASP B 181 MG MG B 502 1555 1555 2.02 LINK OD1 ASN B 182 MG MG B 502 1555 1555 1.99 LINK MG MG B 502 O HOH B 622 1555 1555 2.02 LINK MG MG B 502 O HOH B 643 1555 1555 2.30 LINK MG MG B 502 O HOH B 692 1555 1555 2.13 CRYST1 49.548 80.096 115.771 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020182 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012485 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008638 0.00000