HEADER OXIDOREDUCTASE 15-DEC-23 8XG9 TITLE CRYSTAL STRUCTURE OF PHENYLACETONE MONOOXYGENASE MUTANT PM3 BOUND TO TITLE 2 FAD AND NADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHENYLACETONE MONOOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PAMO,BAEYER-VILLIGER MONOOXYGENASE,BVMO; COMPND 5 EC: 1.14.13.92; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOBIFIDA FUSCA YX; SOURCE 3 ORGANISM_TAXID: 269800; SOURCE 4 GENE: PAMO, TFU_1490; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PHENYLACETONE MONOOXYGENASE, FAD-BINDING, NADPH-BINDING, MONOMER, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR X.LI,Z.T.SUN REVDAT 2 31-DEC-25 8XG9 1 JRNL REVDAT 1 18-DEC-24 8XG9 0 JRNL AUTH X.LI,C.LI,G.QU,B.YUAN,Z.SUN JRNL TITL ENGINEERING OF A BAEYER-VILLIGER MONOOXYGENASE TO IMPROVE JRNL TITL 2 SUBSTRATE SCOPE, STEREOSELECTIVITY AND REGIOSELECTIVITY. JRNL REF CHEMBIOCHEM V. 25 00328 2024 JRNL REFN ESSN 1439-7633 JRNL PMID 38742991 JRNL DOI 10.1002/CBIC.202400328 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.19.2_4158: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 44594 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.480 REMARK 3 FREE R VALUE TEST SET COUNT : 1996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.9800 - 4.8200 1.00 3251 153 0.1871 0.2083 REMARK 3 2 4.8200 - 3.8300 0.98 3076 143 0.1689 0.2009 REMARK 3 3 3.8300 - 3.3400 0.98 3027 137 0.2054 0.2465 REMARK 3 4 3.3400 - 3.0400 0.99 3064 140 0.2423 0.2827 REMARK 3 5 3.0400 - 2.8200 1.00 3053 146 0.2554 0.3096 REMARK 3 6 2.8200 - 2.6500 1.00 3050 143 0.2560 0.2908 REMARK 3 7 2.6500 - 2.5200 1.00 3042 143 0.2493 0.2616 REMARK 3 8 2.5200 - 2.4100 1.00 3056 141 0.2574 0.2803 REMARK 3 9 2.4100 - 2.3200 1.00 3003 143 0.2538 0.2557 REMARK 3 10 2.3200 - 2.2400 1.00 3030 147 0.2466 0.2501 REMARK 3 11 2.2400 - 2.1700 1.00 3027 139 0.2484 0.2874 REMARK 3 12 2.1700 - 2.1100 1.00 3033 137 0.2651 0.2999 REMARK 3 13 2.1100 - 2.0500 0.99 2991 149 0.2717 0.2833 REMARK 3 14 2.0500 - 2.0000 0.96 2895 135 0.3040 0.3189 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4378 REMARK 3 ANGLE : 0.819 5964 REMARK 3 CHIRALITY : 0.046 627 REMARK 3 PLANARITY : 0.005 762 REMARK 3 DIHEDRAL : 11.516 599 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.3616 24.3796 -21.3481 REMARK 3 T TENSOR REMARK 3 T11: 0.1733 T22: 0.2295 REMARK 3 T33: 0.2420 T12: -0.0285 REMARK 3 T13: 0.0044 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 1.6141 L22: 1.6650 REMARK 3 L33: 3.2021 L12: 0.4168 REMARK 3 L13: -1.2232 L23: -0.9791 REMARK 3 S TENSOR REMARK 3 S11: -0.0787 S12: 0.1643 S13: 0.1080 REMARK 3 S21: -0.0309 S22: 0.0773 S23: 0.1401 REMARK 3 S31: -0.0025 S32: -0.4049 S33: -0.0009 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.7712 8.2992 -28.7365 REMARK 3 T TENSOR REMARK 3 T11: 0.4056 T22: 0.2990 REMARK 3 T33: 0.3537 T12: -0.0417 REMARK 3 T13: 0.1088 T23: -0.0741 REMARK 3 L TENSOR REMARK 3 L11: 1.0173 L22: 1.7709 REMARK 3 L33: 1.0646 L12: 1.9310 REMARK 3 L13: -0.9369 L23: -1.8291 REMARK 3 S TENSOR REMARK 3 S11: -0.3002 S12: 0.1288 S13: -0.1208 REMARK 3 S21: -0.4321 S22: 0.1739 S23: -0.1009 REMARK 3 S31: 0.2398 S32: -0.0040 S33: 0.1690 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 177 THROUGH 298 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.9969 18.8588 1.0128 REMARK 3 T TENSOR REMARK 3 T11: 0.3303 T22: 0.2926 REMARK 3 T33: 0.2208 T12: -0.0598 REMARK 3 T13: 0.0338 T23: -0.0298 REMARK 3 L TENSOR REMARK 3 L11: 1.2958 L22: 1.6367 REMARK 3 L33: 1.0651 L12: 0.5350 REMARK 3 L13: 0.0730 L23: -0.2295 REMARK 3 S TENSOR REMARK 3 S11: 0.0405 S12: -0.1773 S13: 0.1247 REMARK 3 S21: 0.2907 S22: -0.1129 S23: -0.0746 REMARK 3 S31: -0.2986 S32: 0.1147 S33: 0.0848 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 299 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1820 7.4619 8.7853 REMARK 3 T TENSOR REMARK 3 T11: 0.4084 T22: 0.4088 REMARK 3 T33: 0.3307 T12: -0.0889 REMARK 3 T13: -0.0609 T23: 0.0246 REMARK 3 L TENSOR REMARK 3 L11: 2.6299 L22: 2.2020 REMARK 3 L33: 1.3978 L12: 0.2921 REMARK 3 L13: 0.4129 L23: 0.0032 REMARK 3 S TENSOR REMARK 3 S11: 0.0544 S12: -0.0994 S13: -0.3647 REMARK 3 S21: 0.3458 S22: -0.1197 S23: -0.2491 REMARK 3 S31: 0.0310 S32: 0.1319 S33: 0.0525 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 339 THROUGH 381 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3395 -3.3908 0.8221 REMARK 3 T TENSOR REMARK 3 T11: 0.2803 T22: 0.2920 REMARK 3 T33: 0.2463 T12: -0.0359 REMARK 3 T13: 0.0573 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.9344 L22: 1.4451 REMARK 3 L33: 1.3453 L12: -0.3710 REMARK 3 L13: -0.3539 L23: 0.2567 REMARK 3 S TENSOR REMARK 3 S11: -0.0638 S12: -0.1815 S13: -0.1018 REMARK 3 S21: 0.2891 S22: -0.0121 S23: 0.1606 REMARK 3 S31: 0.0395 S32: 0.1160 S33: 0.0942 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 382 THROUGH 433 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2280 9.5846 -26.0141 REMARK 3 T TENSOR REMARK 3 T11: 0.4041 T22: 0.2666 REMARK 3 T33: 0.4448 T12: 0.0449 REMARK 3 T13: 0.1289 T23: 0.0438 REMARK 3 L TENSOR REMARK 3 L11: 1.1587 L22: 0.7609 REMARK 3 L33: 0.4858 L12: 1.1432 REMARK 3 L13: -0.4863 L23: -0.5005 REMARK 3 S TENSOR REMARK 3 S11: -0.2470 S12: -0.0905 S13: -0.3634 REMARK 3 S21: -0.3221 S22: -0.0694 S23: -0.3413 REMARK 3 S31: 0.2717 S32: 0.1801 S33: 0.3193 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 434 THROUGH 464 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.8284 26.2340 -22.9134 REMARK 3 T TENSOR REMARK 3 T11: 0.2261 T22: 0.2380 REMARK 3 T33: 0.2913 T12: -0.0415 REMARK 3 T13: 0.0191 T23: 0.0343 REMARK 3 L TENSOR REMARK 3 L11: 2.8008 L22: 0.8197 REMARK 3 L33: 5.6785 L12: 0.7771 REMARK 3 L13: -2.8184 L23: -0.0028 REMARK 3 S TENSOR REMARK 3 S11: -0.1305 S12: -0.2161 S13: -0.2507 REMARK 3 S21: 0.0297 S22: -0.2708 S23: -0.0953 REMARK 3 S31: 0.0952 S32: 0.0897 S33: 0.4329 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 465 THROUGH 490 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.4163 18.1033 -22.7346 REMARK 3 T TENSOR REMARK 3 T11: 0.3036 T22: 0.5536 REMARK 3 T33: 0.4604 T12: 0.0799 REMARK 3 T13: 0.0562 T23: 0.1020 REMARK 3 L TENSOR REMARK 3 L11: 0.5670 L22: 0.6854 REMARK 3 L33: 2.6152 L12: 0.3061 REMARK 3 L13: -0.2444 L23: -0.9565 REMARK 3 S TENSOR REMARK 3 S11: -0.1743 S12: -0.4292 S13: -0.1895 REMARK 3 S21: 0.0386 S22: -0.2342 S23: -0.4730 REMARK 3 S31: 0.4624 S32: 0.7239 S33: 0.4616 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 491 THROUGH 541 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.7839 20.2787 -16.9928 REMARK 3 T TENSOR REMARK 3 T11: 0.2803 T22: 0.4531 REMARK 3 T33: 0.3198 T12: -0.0434 REMARK 3 T13: 0.0187 T23: 0.0534 REMARK 3 L TENSOR REMARK 3 L11: 0.5667 L22: 0.6106 REMARK 3 L33: 2.6058 L12: 0.1034 REMARK 3 L13: 0.2204 L23: -0.3680 REMARK 3 S TENSOR REMARK 3 S11: 0.0727 S12: -0.3121 S13: -0.1030 REMARK 3 S21: 0.0876 S22: -0.1856 S23: -0.1484 REMARK 3 S31: 0.1244 S32: 0.3009 S33: 0.1433 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8XG9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-DEC-23. REMARK 100 THE DEPOSITION ID IS D_1300042676. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-SEP-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-X REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : RIGAKU HYPIX-ARC 150 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44714 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 34.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH6.5, 0.2 M (NH4)2SO4, 30% REMARK 280 MPEG5000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.62450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.40200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.37600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 46.40200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.62450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.37600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLY A 3 REMARK 465 GLN A 4 REMARK 465 THR A 5 REMARK 465 THR A 6 REMARK 465 VAL A 7 REMARK 465 ASP A 8 REMARK 465 SER A 9 REMARK 465 VAL A 155 REMARK 465 PRO A 156 REMARK 465 GLN A 157 REMARK 465 LEU A 158 REMARK 465 GLY A 388 REMARK 465 PHE A 389 REMARK 465 ASP A 390 REMARK 465 ALA A 391 REMARK 465 LEU A 392 REMARK 465 THR A 501 REMARK 465 GLY A 502 REMARK 465 ALA A 503 REMARK 465 ASN A 504 REMARK 465 VAL A 505 REMARK 465 PRO A 506 REMARK 465 GLY A 507 REMARK 465 LYS A 508 REMARK 465 PRO A 509 REMARK 465 HIS A 542 REMARK 465 HIS A 543 REMARK 465 HIS A 544 REMARK 465 HIS A 545 REMARK 465 HIS A 546 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 149 43.06 -102.19 REMARK 500 ASN A 176 59.35 -151.66 REMARK 500 ARG A 217 -92.24 -99.08 REMARK 500 ALA A 415 3.82 -69.00 REMARK 500 SER A 439 80.83 -3.19 REMARK 500 MET A 513 54.37 -106.72 REMARK 500 LEU A 514 110.36 -163.34 REMARK 500 LYS A 532 52.48 -100.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 882 DISTANCE = 5.88 ANGSTROMS DBREF 8XG9 A 1 540 UNP Q47PU3 PAMO_THEFY 1 542 SEQADV 8XG9 GLY A 441 UNP Q47PU3 SER 441 CONFLICT SEQADV 8XG9 ILE A 442 UNP Q47PU3 ALA 442 CONFLICT SEQADV 8XG9 A UNP Q47PU3 LEU 443 DELETION SEQADV 8XG9 A UNP Q47PU3 SER 444 DELETION SEQADV 8XG9 HIS A 541 UNP Q47PU3 EXPRESSION TAG SEQADV 8XG9 HIS A 542 UNP Q47PU3 EXPRESSION TAG SEQADV 8XG9 HIS A 543 UNP Q47PU3 EXPRESSION TAG SEQADV 8XG9 HIS A 544 UNP Q47PU3 EXPRESSION TAG SEQADV 8XG9 HIS A 545 UNP Q47PU3 EXPRESSION TAG SEQADV 8XG9 HIS A 546 UNP Q47PU3 EXPRESSION TAG SEQRES 1 A 546 MET ALA GLY GLN THR THR VAL ASP SER ARG ARG GLN PRO SEQRES 2 A 546 PRO GLU GLU VAL ASP VAL LEU VAL VAL GLY ALA GLY PHE SEQRES 3 A 546 SER GLY LEU TYR ALA LEU TYR ARG LEU ARG GLU LEU GLY SEQRES 4 A 546 ARG SER VAL HIS VAL ILE GLU THR ALA GLY ASP VAL GLY SEQRES 5 A 546 GLY VAL TRP TYR TRP ASN ARG TYR PRO GLY ALA ARG CYS SEQRES 6 A 546 ASP ILE GLU SER ILE GLU TYR CYS TYR SER PHE SER GLU SEQRES 7 A 546 GLU VAL LEU GLN GLU TRP ASN TRP THR GLU ARG TYR ALA SEQRES 8 A 546 SER GLN PRO GLU ILE LEU ARG TYR ILE ASN PHE VAL ALA SEQRES 9 A 546 ASP LYS PHE ASP LEU ARG SER GLY ILE THR PHE HIS THR SEQRES 10 A 546 THR VAL THR ALA ALA ALA PHE ASP GLU ALA THR ASN THR SEQRES 11 A 546 TRP THR VAL ASP THR ASN HIS GLY ASP ARG ILE ARG ALA SEQRES 12 A 546 ARG TYR LEU ILE MET ALA SER GLY GLN LEU SER VAL PRO SEQRES 13 A 546 GLN LEU PRO ASN PHE PRO GLY LEU LYS ASP PHE ALA GLY SEQRES 14 A 546 ASN LEU TYR HIS THR GLY ASN TRP PRO HIS GLU PRO VAL SEQRES 15 A 546 ASP PHE SER GLY GLN ARG VAL GLY VAL ILE GLY THR GLY SEQRES 16 A 546 SER SER GLY ILE GLN VAL SER PRO GLN ILE ALA LYS GLN SEQRES 17 A 546 ALA ALA GLU LEU PHE VAL PHE GLN ARG THR PRO HIS PHE SEQRES 18 A 546 ALA VAL PRO ALA ARG ASN ALA PRO LEU ASP PRO GLU PHE SEQRES 19 A 546 LEU ALA ASP LEU LYS LYS ARG TYR ALA GLU PHE ARG GLU SEQRES 20 A 546 GLU SER ARG ASN THR PRO GLY GLY THR HIS ARG TYR GLN SEQRES 21 A 546 GLY PRO LYS SER ALA LEU GLU VAL SER ASP GLU GLU LEU SEQRES 22 A 546 VAL GLU THR LEU GLU ARG TYR TRP GLN GLU GLY GLY PRO SEQRES 23 A 546 ASP ILE LEU ALA ALA TYR ARG ASP ILE LEU ARG ASP ARG SEQRES 24 A 546 ASP ALA ASN GLU ARG VAL ALA GLU PHE ILE ARG ASN LYS SEQRES 25 A 546 ILE ARG ASN THR VAL ARG ASP PRO GLU VAL ALA GLU ARG SEQRES 26 A 546 LEU VAL PRO LYS GLY TYR PRO PHE GLY THR LYS ARG LEU SEQRES 27 A 546 ILE LEU GLU ILE ASP TYR TYR GLU MET PHE ASN ARG ASP SEQRES 28 A 546 ASN VAL HIS LEU VAL ASP THR LEU SER ALA PRO ILE GLU SEQRES 29 A 546 THR ILE THR PRO ARG GLY VAL ARG THR SER GLU ARG GLU SEQRES 30 A 546 TYR GLU LEU ASP SER LEU VAL LEU ALA THR GLY PHE ASP SEQRES 31 A 546 ALA LEU THR GLY ALA LEU PHE LYS ILE ASP ILE ARG GLY SEQRES 32 A 546 VAL GLY ASN VAL ALA LEU LYS GLU LYS TRP ALA ALA GLY SEQRES 33 A 546 PRO ARG THR TYR LEU GLY LEU SER THR ALA GLY PHE PRO SEQRES 34 A 546 ASN LEU PHE PHE ILE ALA GLY PRO GLY SER PRO GLY ILE SEQRES 35 A 546 ASN MET LEU VAL SER ILE GLU GLN HIS VAL GLU TRP VAL SEQRES 36 A 546 THR ASP HIS ILE ALA TYR MET PHE LYS ASN GLY LEU THR SEQRES 37 A 546 ARG SER GLU ALA VAL LEU GLU LYS GLU ASP GLU TRP VAL SEQRES 38 A 546 GLU HIS VAL ASN GLU ILE ALA ASP GLU THR LEU TYR PRO SEQRES 39 A 546 MET THR ALA SER TRP TYR THR GLY ALA ASN VAL PRO GLY SEQRES 40 A 546 LYS PRO ARG VAL PHE MET LEU TYR VAL GLY GLY PHE HIS SEQRES 41 A 546 ARG TYR ARG GLN ILE CYS ASP GLU VAL ALA ALA LYS GLY SEQRES 42 A 546 TYR GLU GLY PHE VAL LEU THR HIS HIS HIS HIS HIS HIS HET FAD A 601 84 HET NAP A 602 73 HET MES A 603 25 HET EDO A 604 10 HET GOL A 605 14 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 NAP C21 H28 N7 O17 P3 FORMUL 4 MES C6 H13 N O4 S FORMUL 5 EDO C2 H6 O2 FORMUL 6 GOL C3 H8 O3 FORMUL 7 HOH *182(H2 O) HELIX 1 AA1 GLY A 25 LEU A 38 1 14 HELIX 2 AA2 GLY A 53 ASN A 58 1 6 HELIX 3 AA3 SER A 77 TRP A 84 1 8 HELIX 4 AA4 SER A 92 PHE A 107 1 16 HELIX 5 AA5 ASP A 108 SER A 111 5 4 HELIX 6 AA6 GLY A 163 PHE A 167 5 5 HELIX 7 AA7 GLY A 175 TRP A 177 5 3 HELIX 8 AA8 GLY A 195 ALA A 209 1 15 HELIX 9 AA9 ASP A 231 LYS A 240 1 10 HELIX 10 AB1 ARG A 241 ASN A 251 1 11 HELIX 11 AB2 SER A 269 GLY A 284 1 16 HELIX 12 AB3 GLY A 285 ALA A 291 5 7 HELIX 13 AB4 ASP A 298 VAL A 317 1 20 HELIX 14 AB5 ASP A 319 VAL A 327 1 9 HELIX 15 AB6 ASP A 343 PHE A 348 1 6 HELIX 16 AB7 GLY A 394 LYS A 398 1 5 HELIX 17 AB8 GLY A 403 VAL A 407 5 5 HELIX 18 AB9 ALA A 408 TRP A 413 1 6 HELIX 19 AC1 ASN A 443 ASN A 465 1 23 HELIX 20 AC2 VAL A 473 ASP A 489 1 17 HELIX 21 AC3 GLU A 490 THR A 491 5 2 HELIX 22 AC4 LEU A 492 TYR A 500 5 9 HELIX 23 AC5 GLY A 518 LYS A 532 1 15 SHEET 1 AA1 7 ILE A 113 THR A 114 0 SHEET 2 AA1 7 VAL A 42 ILE A 45 1 N VAL A 44 O THR A 114 SHEET 3 AA1 7 GLU A 16 VAL A 22 1 N VAL A 21 O HIS A 43 SHEET 4 AA1 7 ARG A 140 MET A 148 1 O ILE A 147 N LEU A 20 SHEET 5 AA1 7 THR A 130 THR A 135 -1 N VAL A 133 O ILE A 141 SHEET 6 AA1 7 VAL A 119 ASP A 125 -1 N ASP A 125 O THR A 130 SHEET 7 AA1 7 ASP A 400 ARG A 402 1 O ARG A 402 N ALA A 122 SHEET 1 AA2 5 ILE A 113 THR A 114 0 SHEET 2 AA2 5 VAL A 42 ILE A 45 1 N VAL A 44 O THR A 114 SHEET 3 AA2 5 GLU A 16 VAL A 22 1 N VAL A 21 O HIS A 43 SHEET 4 AA2 5 ARG A 140 MET A 148 1 O ILE A 147 N LEU A 20 SHEET 5 AA2 5 LEU A 431 PHE A 433 1 O PHE A 432 N MET A 148 SHEET 1 AA3 5 ASN A 170 HIS A 173 0 SHEET 2 AA3 5 SER A 382 LEU A 385 1 O LEU A 385 N TYR A 172 SHEET 3 AA3 5 ARG A 188 ILE A 192 1 N GLY A 190 O VAL A 384 SHEET 4 AA3 5 GLU A 211 GLN A 216 1 O PHE A 215 N VAL A 191 SHEET 5 AA3 5 VAL A 353 ASP A 357 1 O VAL A 356 N VAL A 214 SHEET 1 AA4 2 ALA A 222 PRO A 224 0 SHEET 2 AA4 2 ILE A 339 GLU A 341 1 O GLU A 341 N VAL A 223 SHEET 1 AA5 3 ILE A 363 ILE A 366 0 SHEET 2 AA5 3 GLY A 370 THR A 373 -1 O ARG A 372 N GLU A 364 SHEET 3 AA5 3 GLU A 377 GLU A 379 -1 O TYR A 378 N VAL A 371 SHEET 1 AA6 2 ARG A 469 ALA A 472 0 SHEET 2 AA6 2 PHE A 537 THR A 540 -1 O VAL A 538 N GLU A 471 CRYST1 83.249 84.752 92.804 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012012 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011799 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010775 0.00000 CONECT 4142 4143 4144 4145 4194 CONECT 4143 4142 CONECT 4144 4142 CONECT 4145 4142 4146 CONECT 4146 4145 4147 4195 4196 CONECT 4147 4146 4148 4149 4197 CONECT 4148 4147 4153 CONECT 4149 4147 4150 4151 4198 CONECT 4150 4149 4199 CONECT 4151 4149 4152 4153 4200 CONECT 4152 4151 4201 CONECT 4153 4148 4151 4154 4202 CONECT 4154 4153 4155 4163 CONECT 4155 4154 4156 4203 CONECT 4156 4155 4157 CONECT 4157 4156 4158 4163 CONECT 4158 4157 4159 4160 CONECT 4159 4158 4204 4205 CONECT 4160 4158 4161 CONECT 4161 4160 4162 4206 CONECT 4162 4161 4163 CONECT 4163 4154 4157 4162 CONECT 4164 4165 4181 CONECT 4165 4164 4166 4167 CONECT 4166 4165 CONECT 4167 4165 4168 4207 CONECT 4168 4167 4169 4170 CONECT 4169 4168 CONECT 4170 4168 4171 4181 CONECT 4171 4170 4172 CONECT 4172 4171 4173 4179 CONECT 4173 4172 4174 4208 CONECT 4174 4173 4175 4176 CONECT 4175 4174 4209 4210 4211 CONECT 4176 4174 4177 4178 CONECT 4177 4176 4212 4213 4214 CONECT 4178 4176 4179 4215 CONECT 4179 4172 4178 4180 CONECT 4180 4179 4181 4182 CONECT 4181 4164 4170 4180 CONECT 4182 4180 4183 4216 4217 CONECT 4183 4182 4184 4185 4218 CONECT 4184 4183 4219 CONECT 4185 4183 4186 4187 4220 CONECT 4186 4185 4221 CONECT 4187 4185 4188 4189 4222 CONECT 4188 4187 4223 CONECT 4189 4187 4190 4224 4225 CONECT 4190 4189 4191 CONECT 4191 4190 4192 4193 4194 CONECT 4192 4191 CONECT 4193 4191 CONECT 4194 4142 4191 CONECT 4195 4146 CONECT 4196 4146 CONECT 4197 4147 CONECT 4198 4149 CONECT 4199 4150 CONECT 4200 4151 CONECT 4201 4152 CONECT 4202 4153 CONECT 4203 4155 CONECT 4204 4159 CONECT 4205 4159 CONECT 4206 4161 CONECT 4207 4167 CONECT 4208 4173 CONECT 4209 4175 CONECT 4210 4175 CONECT 4211 4175 CONECT 4212 4177 CONECT 4213 4177 CONECT 4214 4177 CONECT 4215 4178 CONECT 4216 4182 CONECT 4217 4182 CONECT 4218 4183 CONECT 4219 4184 CONECT 4220 4185 CONECT 4221 4186 CONECT 4222 4187 CONECT 4223 4188 CONECT 4224 4189 CONECT 4225 4189 CONECT 4226 4227 4228 4229 4248 CONECT 4227 4226 CONECT 4228 4226 CONECT 4229 4226 4230 CONECT 4230 4229 4231 4274 4275 CONECT 4231 4230 4232 4233 4276 CONECT 4232 4231 4237 CONECT 4233 4231 4234 4235 4277 CONECT 4234 4233 4278 CONECT 4235 4233 4236 4237 4279 CONECT 4236 4235 4270 CONECT 4237 4232 4235 4238 4280 CONECT 4238 4237 4239 4247 CONECT 4239 4238 4240 4281 CONECT 4240 4239 4241 CONECT 4241 4240 4242 4247 CONECT 4242 4241 4243 4244 CONECT 4243 4242 4282 4283 CONECT 4244 4242 4245 CONECT 4245 4244 4246 4284 CONECT 4246 4245 4247 CONECT 4247 4238 4241 4246 CONECT 4248 4226 4249 CONECT 4249 4248 4250 4251 4252 CONECT 4250 4249 CONECT 4251 4249 CONECT 4252 4249 4253 CONECT 4253 4252 4254 4285 4286 CONECT 4254 4253 4255 4256 4287 CONECT 4255 4254 4260 CONECT 4256 4254 4257 4258 4288 CONECT 4257 4256 4289 CONECT 4258 4256 4259 4260 4290 CONECT 4259 4258 4291 CONECT 4260 4255 4258 4261 4292 CONECT 4261 4260 4262 4269 CONECT 4262 4261 4263 4293 CONECT 4263 4262 4264 4267 CONECT 4264 4263 4265 4266 CONECT 4265 4264 CONECT 4266 4264 4294 4295 CONECT 4267 4263 4268 4296 CONECT 4268 4267 4269 4297 CONECT 4269 4261 4268 4298 CONECT 4270 4236 4271 4272 4273 CONECT 4271 4270 CONECT 4272 4270 CONECT 4273 4270 CONECT 4274 4230 CONECT 4275 4230 CONECT 4276 4231 CONECT 4277 4233 CONECT 4278 4234 CONECT 4279 4235 CONECT 4280 4237 CONECT 4281 4239 CONECT 4282 4243 CONECT 4283 4243 CONECT 4284 4245 CONECT 4285 4253 CONECT 4286 4253 CONECT 4287 4254 CONECT 4288 4256 CONECT 4289 4257 CONECT 4290 4258 CONECT 4291 4259 CONECT 4292 4260 CONECT 4293 4262 CONECT 4294 4266 CONECT 4295 4266 CONECT 4296 4267 CONECT 4297 4268 CONECT 4298 4269 CONECT 4299 4300 4304 CONECT 4300 4299 4301 4311 4312 CONECT 4301 4300 4302 4313 4314 CONECT 4302 4301 4303 4305 4315 CONECT 4303 4302 4304 4316 4317 CONECT 4304 4299 4303 4318 4319 CONECT 4305 4302 4306 4320 4321 CONECT 4306 4305 4307 4322 4323 CONECT 4307 4306 4308 4309 4310 CONECT 4308 4307 CONECT 4309 4307 CONECT 4310 4307 CONECT 4311 4300 CONECT 4312 4300 CONECT 4313 4301 CONECT 4314 4301 CONECT 4315 4302 CONECT 4316 4303 CONECT 4317 4303 CONECT 4318 4304 CONECT 4319 4304 CONECT 4320 4305 CONECT 4321 4305 CONECT 4322 4306 CONECT 4323 4306 CONECT 4324 4325 4326 4328 4329 CONECT 4325 4324 4330 CONECT 4326 4324 4327 4331 4332 CONECT 4327 4326 4333 CONECT 4328 4324 CONECT 4329 4324 CONECT 4330 4325 CONECT 4331 4326 CONECT 4332 4326 CONECT 4333 4327 CONECT 4334 4335 4336 4340 4341 CONECT 4335 4334 4342 CONECT 4336 4334 4337 4338 4343 CONECT 4337 4336 4344 CONECT 4338 4336 4339 4345 4346 CONECT 4339 4338 4347 CONECT 4340 4334 CONECT 4341 4334 CONECT 4342 4335 CONECT 4343 4336 CONECT 4344 4337 CONECT 4345 4338 CONECT 4346 4338 CONECT 4347 4339 MASTER 414 0 5 23 24 0 0 6 4440 1 206 42 END