data_8XGP # _entry.id 8XGP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8XGP pdb_00008xgp 10.2210/pdb8xgp/pdb WWPDB D_1300043457 ? ? BMRB 36625 ? 10.13018/BMR36625 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-02-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 8XGP _pdbx_database_status.recvd_initial_deposition_date 2023-12-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs . _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution NMR structure of an antiparallel chair-type G-quadruplex from NOP56 intron' _pdbx_database_related.db_id 36625 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 3 _pdbx_contact_author.email dahan@sjtu.edu.cn _pdbx_contact_author.name_first Da _pdbx_contact_author.name_last Han _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-0804-2964 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yan, Z.' 1 0009-0006-1206-5495 'Guo, P.' 2 0000-0001-7760-5786 'Han, D.' 3 0000-0002-0804-2964 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural insights into an antiparallel chair-type G-quadruplex from NOP56 intron for oncogene regulation' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yan, Z.' 1 0009-0006-1206-5495 primary 'Guo, P.' 2 0000-0001-7760-5786 primary 'Han, D.' 3 0000-0002-0804-2964 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-D(*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*G)-3') ; _entity.formula_weight 6553.182 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DG)(DG)(DG)(DC)(DC)(DT)(DG)(DG)(DG)(DC)(DC)(DT)(DG)(DG)(DG)(DC)(DC)(DT)(DG)(DG) (DG) ; _entity_poly.pdbx_seq_one_letter_code_can GGGCCTGGGCCTGGGCCTGGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DG n 1 4 DC n 1 5 DC n 1 6 DT n 1 7 DG n 1 8 DG n 1 9 DG n 1 10 DC n 1 11 DC n 1 12 DT n 1 13 DG n 1 14 DG n 1 15 DG n 1 16 DC n 1 17 DC n 1 18 DT n 1 19 DG n 1 20 DG n 1 21 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 21 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 DC 5 5 5 DC DC A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DC 10 10 10 DC DC A . n A 1 11 DC 11 11 11 DC DC A . n A 1 12 DT 12 12 12 DT DT A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DG 15 15 15 DG DG A . n A 1 16 DC 16 16 16 DC DC A . n A 1 17 DC 17 17 17 DC DC A . n A 1 18 DT 18 18 18 DT DT A . n A 1 19 DG 19 19 19 DG DG A . n A 1 20 DG 20 20 20 DG DG A . n A 1 21 DG 21 21 21 DG DG A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8XGP _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 8XGP _struct.title 'Solution NMR structure of an antiparallel chair-type G-quadruplex from NOP56 intron' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8XGP _struct_keywords.text 'pH, CGCG tetrad, CC base pair, DNA' _struct_keywords.pdbx_keywords DNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8XGP _struct_ref.pdbx_db_accession 8XGP _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8XGP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 21 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8XGP _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 21 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 21 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N7 ? ? ? 1_555 A DC 11 N4 ? ? A DG 1 A DC 11 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog2 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 9 N2 ? ? A DG 2 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG 9 N1 ? ? A DG 2 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 21 O6 ? ? A DG 2 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 21 N7 ? ? A DG 2 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 8 O6 ? ? A DG 3 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 8 N7 ? ? A DG 3 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 20 N2 ? ? A DG 3 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 20 N1 ? ? A DG 3 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DC 4 N3 ? ? ? 1_555 A DG 7 N1 ? ? A DC 4 A DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 4 N4 ? ? ? 1_555 A DG 7 O6 ? ? A DC 4 A DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 4 O2 ? ? ? 1_555 A DG 7 N2 ? ? A DC 4 A DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 4 N4 ? ? ? 1_555 A DG 19 O6 ? ? A DC 4 A DG 19 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog14 hydrog ? ? A DC 5 N4 ? ? ? 1_555 A DC 17 O2 ? ? A DC 5 A DC 17 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog15 hydrog ? ? A DC 5 O2 ? ? ? 1_555 A DC 17 N4 ? ? A DC 5 A DC 17 1_555 ? ? ? ? ? ? TYPE_15_PAIR ? ? ? hydrog16 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DC 16 N4 ? ? A DG 7 A DC 16 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog17 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 8 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 8 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 9 N7 ? ? ? 1_555 A DG 14 N2 ? ? A DG 9 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DG 14 N1 ? ? A DG 9 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 14 N7 ? ? ? 1_555 A DG 21 N2 ? ? A DG 14 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 14 O6 ? ? ? 1_555 A DG 21 N1 ? ? A DG 14 A DG 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 15 N1 ? ? ? 1_555 A DG 20 O6 ? ? A DG 15 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 15 N2 ? ? ? 1_555 A DG 20 N7 ? ? A DG 15 A DG 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DC 16 N3 ? ? ? 1_555 A DG 19 N1 ? ? A DC 16 A DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 16 N4 ? ? ? 1_555 A DG 19 O6 ? ? A DC 16 A DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 16 O2 ? ? ? 1_555 A DG 19 N2 ? ? A DC 16 A DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 8XGP _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.21 108.30 3.91 0.30 N 2 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.16 108.30 3.86 0.30 N 3 1 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.14 108.30 3.84 0.30 N 4 1 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.56 108.30 3.26 0.30 N 5 1 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.32 108.30 3.02 0.30 N 6 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.24 108.30 2.94 0.30 N 7 1 "C3'" A DG 8 ? ? "C2'" A DG 8 ? ? "C1'" A DG 8 ? ? 97.43 102.40 -4.97 0.80 N 8 1 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 115.36 108.30 7.06 0.30 N 9 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 116.30 108.30 8.00 0.30 N 10 1 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 113.97 108.30 5.67 0.30 N 11 1 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 112.08 108.30 3.78 0.30 N 12 1 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 117.33 108.30 9.03 0.30 N 13 1 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 113.49 108.30 5.19 0.30 N 14 1 "C4'" A DC 16 ? ? "C3'" A DC 16 ? ? "C2'" A DC 16 ? ? 97.44 102.20 -4.76 0.70 N 15 1 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 112.75 108.30 4.45 0.30 N 16 1 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 115.42 108.30 7.12 0.30 N 17 1 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.18 108.30 2.88 0.30 N 18 1 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 112.10 108.30 3.80 0.30 N 19 1 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 113.51 108.30 5.21 0.30 N 20 1 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 110.64 108.30 2.34 0.30 N 21 2 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.39 108.30 4.09 0.30 N 22 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.90 108.30 5.60 0.30 N 23 2 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.97 108.30 2.67 0.30 N 24 2 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 113.12 108.30 4.82 0.30 N 25 2 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.81 108.30 3.51 0.30 N 26 2 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.31 108.30 3.01 0.30 N 27 2 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 117.95 108.30 9.65 0.30 N 28 2 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DG 9 ? ? 127.23 119.70 7.53 1.20 Y 29 2 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.01 108.30 2.71 0.30 N 30 2 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 111.40 108.30 3.10 0.30 N 31 2 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 112.64 108.30 4.34 0.30 N 32 2 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.87 118.90 3.97 0.60 N 33 2 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 117.67 121.90 -4.23 0.70 N 34 2 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 111.28 108.30 2.98 0.30 N 35 2 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.23 122.90 -3.67 0.60 N 36 2 "C1'" A DG 14 ? ? "O4'" A DG 14 ? ? "C4'" A DG 14 ? ? 102.54 110.10 -7.56 1.00 N 37 2 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 119.35 108.30 11.05 0.30 N 38 2 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.71 108.30 3.41 0.30 N 39 2 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 113.29 108.30 4.99 0.30 N 40 2 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 110.77 108.30 2.47 0.30 N 41 2 "C3'" A DC 17 ? ? "O3'" A DC 17 ? ? P A DT 18 ? ? 127.98 119.70 8.28 1.20 Y 42 2 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 114.18 108.30 5.88 0.30 N 43 2 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 114.90 108.30 6.60 0.30 N 44 3 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.10 108.30 3.80 0.30 N 45 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.13 108.30 3.83 0.30 N 46 3 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.22 108.30 1.92 0.30 N 47 3 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 111.97 108.30 3.67 0.30 N 48 3 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 112.33 108.30 4.03 0.30 N 49 3 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 112.75 108.30 4.45 0.30 N 50 3 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.72 108.30 2.42 0.30 N 51 3 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 113.04 108.30 4.74 0.30 N 52 3 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DG 9 ? ? 127.70 119.70 8.00 1.20 Y 53 3 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.88 108.30 4.58 0.30 N 54 3 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 114.38 108.30 6.08 0.30 N 55 3 N1 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 122.99 118.90 4.09 0.60 N 56 3 N3 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 117.10 121.90 -4.80 0.70 N 57 3 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 113.29 108.30 4.99 0.30 N 58 3 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 123.22 118.90 4.32 0.60 N 59 3 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 117.34 121.90 -4.56 0.70 N 60 3 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 112.33 108.30 4.03 0.30 N 61 3 C6 A DT 12 ? ? C5 A DT 12 ? ? C7 A DT 12 ? ? 119.20 122.90 -3.70 0.60 N 62 3 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 113.88 108.30 5.58 0.30 N 63 3 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 113.15 108.30 4.85 0.30 N 64 3 "C4'" A DC 16 ? ? "C3'" A DC 16 ? ? "C2'" A DC 16 ? ? 95.88 102.20 -6.32 0.70 N 65 3 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 113.14 108.30 4.84 0.30 N 66 3 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 113.90 108.30 5.60 0.30 N 67 3 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.56 108.30 3.26 0.30 N 68 3 C6 A DT 18 ? ? C5 A DT 18 ? ? C7 A DT 18 ? ? 119.26 122.90 -3.64 0.60 N 69 3 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 113.15 108.30 4.85 0.30 N 70 3 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 127.02 119.70 7.32 1.20 Y 71 3 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 114.87 108.30 6.57 0.30 N 72 3 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 110.83 108.30 2.53 0.30 N 73 4 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.47 108.30 3.17 0.30 N 74 4 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 114.07 108.30 5.77 0.30 N 75 4 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.56 108.30 2.26 0.30 N 76 4 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 111.92 108.30 3.62 0.30 N 77 4 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 112.32 108.30 4.02 0.30 N 78 4 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.93 108.30 2.63 0.30 N 79 4 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 115.96 108.30 7.66 0.30 N 80 4 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DG 9 ? ? 127.90 119.70 8.20 1.20 Y 81 4 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 113.89 108.30 5.59 0.30 N 82 4 "O4'" A DC 10 ? ? "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? 101.95 104.50 -2.55 0.40 N 83 4 "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? "C2'" A DC 10 ? ? 97.98 102.20 -4.22 0.70 N 84 4 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 112.87 108.30 4.57 0.30 N 85 4 "C1'" A DG 14 ? ? "O4'" A DG 14 ? ? "C4'" A DG 14 ? ? 103.86 110.10 -6.24 1.00 N 86 4 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 118.12 108.30 9.82 0.30 N 87 4 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 112.91 108.30 4.61 0.30 N 88 4 "C4'" A DC 16 ? ? "C3'" A DC 16 ? ? "C2'" A DC 16 ? ? 96.97 102.20 -5.23 0.70 N 89 4 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 112.86 108.30 4.56 0.30 N 90 4 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 114.15 108.30 5.85 0.30 N 91 4 N3 A DC 17 ? ? C2 A DC 17 ? ? O2 A DC 17 ? ? 117.53 121.90 -4.37 0.70 N 92 4 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 110.42 108.30 2.12 0.30 N 93 4 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 112.01 108.30 3.71 0.30 N 94 4 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 113.75 108.30 5.45 0.30 N 95 4 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 110.82 108.30 2.52 0.30 N 96 5 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.86 108.30 4.56 0.30 N 97 5 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.37 108.30 5.07 0.30 N 98 5 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.87 108.30 4.57 0.30 N 99 5 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 114.49 108.30 6.19 0.30 N 100 5 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 112.21 108.30 3.91 0.30 N 101 5 "C3'" A DG 8 ? ? "C2'" A DG 8 ? ? "C1'" A DG 8 ? ? 97.22 102.40 -5.18 0.80 N 102 5 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 115.59 108.30 7.29 0.30 N 103 5 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.35 108.30 4.05 0.30 N 104 5 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 111.30 108.30 3.00 0.30 N 105 5 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 114.42 108.30 6.12 0.30 N 106 5 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 113.16 108.30 4.86 0.30 N 107 5 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 111.06 108.30 2.76 0.30 N 108 5 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 112.54 108.30 4.24 0.30 N 109 5 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 112.07 108.30 3.77 0.30 N 110 5 "C4'" A DC 16 ? ? "C3'" A DC 16 ? ? "C2'" A DC 16 ? ? 96.17 102.20 -6.03 0.70 N 111 5 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 113.02 108.30 4.72 0.30 N 112 5 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 112.35 108.30 4.05 0.30 N 113 5 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 110.71 108.30 2.41 0.30 N 114 5 C6 A DT 18 ? ? C5 A DT 18 ? ? C7 A DT 18 ? ? 119.11 122.90 -3.79 0.60 N 115 5 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 113.13 108.30 4.83 0.30 N 116 5 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 115.14 108.30 6.84 0.30 N 117 6 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.40 108.30 3.10 0.30 N 118 6 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.27 108.30 4.97 0.30 N 119 6 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.15 108.30 1.85 0.30 N 120 6 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.62 108.30 4.32 0.30 N 121 6 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 112.61 108.30 4.31 0.30 N 122 6 "C3'" A DG 7 ? ? "O3'" A DG 7 ? ? P A DG 8 ? ? 127.67 119.70 7.97 1.20 Y 123 6 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 114.89 108.30 6.59 0.30 N 124 6 "O4'" A DG 9 ? ? "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? 101.26 104.50 -3.24 0.40 N 125 6 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 113.63 108.30 5.33 0.30 N 126 6 "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? "C2'" A DC 10 ? ? 97.81 102.20 -4.39 0.70 N 127 6 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.62 108.30 2.32 0.30 N 128 6 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 112.56 108.30 4.26 0.30 N 129 6 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 113.14 108.30 4.84 0.30 N 130 6 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.36 108.30 2.06 0.30 N 131 6 "C4'" A DC 16 ? ? "C3'" A DC 16 ? ? "C2'" A DC 16 ? ? 97.12 102.20 -5.08 0.70 N 132 6 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 112.55 108.30 4.25 0.30 N 133 6 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 115.17 108.30 6.87 0.30 N 134 6 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.05 108.30 2.75 0.30 N 135 6 C6 A DT 18 ? ? C5 A DT 18 ? ? C7 A DT 18 ? ? 118.67 122.90 -4.23 0.60 N 136 6 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 112.57 108.30 4.27 0.30 N 137 6 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 127.93 119.70 8.23 1.20 Y 138 6 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 113.62 108.30 5.32 0.30 N 139 7 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.38 108.30 3.08 0.30 N 140 7 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.75 108.30 5.45 0.30 N 141 7 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.57 108.30 2.27 0.30 N 142 7 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.62 108.30 4.32 0.30 N 143 7 N1 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 122.86 118.90 3.96 0.60 N 144 7 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 114.72 108.30 6.42 0.30 N 145 7 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 111.23 108.30 2.93 0.30 N 146 7 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.35 108.30 2.05 0.30 N 147 7 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 113.88 108.30 5.58 0.30 N 148 7 "C3'" A DG 8 ? ? "O3'" A DG 8 ? ? P A DG 9 ? ? 126.94 119.70 7.24 1.20 Y 149 7 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.28 108.30 2.98 0.30 N 150 7 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 110.49 108.30 2.19 0.30 N 151 7 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 117.20 108.30 8.90 0.30 N 152 7 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 112.53 108.30 4.23 0.30 N 153 7 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 110.49 108.30 2.19 0.30 N 154 7 "C1'" A DG 14 ? ? "O4'" A DG 14 ? ? "C4'" A DG 14 ? ? 103.73 110.10 -6.37 1.00 N 155 7 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 115.32 108.30 7.02 0.30 N 156 7 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 112.25 108.30 3.95 0.30 N 157 7 "C4'" A DC 16 ? ? "C3'" A DC 16 ? ? "C2'" A DC 16 ? ? 96.81 102.20 -5.39 0.70 N 158 7 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 113.18 108.30 4.88 0.30 N 159 7 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 114.90 108.30 6.60 0.30 N 160 7 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 113.83 108.30 5.53 0.30 N 161 7 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 114.47 108.30 6.17 0.30 N 162 8 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.43 108.30 4.13 0.30 N 163 8 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.56 108.30 4.26 0.30 N 164 8 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.04 108.30 3.74 0.30 N 165 8 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 114.07 108.30 5.77 0.30 N 166 8 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.29 108.30 1.99 0.30 N 167 8 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 112.51 108.30 4.21 0.30 N 168 8 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 115.42 108.30 7.12 0.30 N 169 8 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.27 108.30 3.97 0.30 N 170 8 "C4'" A DC 10 ? ? "C3'" A DC 10 ? ? "C2'" A DC 10 ? ? 97.18 102.20 -5.02 0.70 N 171 8 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 113.23 108.30 4.93 0.30 N 172 8 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? "C2'" A DG 14 ? ? 100.83 105.90 -5.07 0.80 N 173 8 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 114.14 108.30 5.84 0.30 N 174 8 N3 A DG 14 ? ? C4 A DG 14 ? ? C5 A DG 14 ? ? 125.15 128.60 -3.45 0.50 N 175 8 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.69 108.30 3.39 0.30 N 176 8 "C4'" A DC 16 ? ? "C3'" A DC 16 ? ? "C2'" A DC 16 ? ? 95.49 102.20 -6.71 0.70 N 177 8 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 113.75 108.30 5.45 0.30 N 178 8 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 111.58 108.30 3.28 0.30 N 179 8 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 110.79 108.30 2.49 0.30 N 180 8 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 112.84 108.30 4.54 0.30 N 181 8 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 115.56 108.30 7.26 0.30 N 182 9 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 112.81 108.30 4.51 0.30 N 183 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.49 108.30 5.19 0.30 N 184 9 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.47 108.30 4.17 0.30 N 185 9 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 113.76 108.30 5.46 0.30 N 186 9 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.33 108.30 2.03 0.30 N 187 9 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 117.70 108.30 9.40 0.30 N 188 9 "O4'" A DG 9 ? ? "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? 101.35 104.50 -3.15 0.40 N 189 9 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.69 108.30 4.39 0.30 N 190 9 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 115.56 108.30 7.26 0.30 N 191 9 N1 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 122.62 118.90 3.72 0.60 N 192 9 N3 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 117.54 121.90 -4.36 0.70 N 193 9 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 113.67 108.30 5.37 0.30 N 194 9 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 123.08 118.90 4.18 0.60 N 195 9 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 117.07 121.90 -4.83 0.70 N 196 9 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 110.25 108.30 1.95 0.30 N 197 9 "C1'" A DG 14 ? ? "O4'" A DG 14 ? ? "C4'" A DG 14 ? ? 102.50 110.10 -7.60 1.00 N 198 9 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 116.29 108.30 7.99 0.30 N 199 9 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 112.49 108.30 4.19 0.30 N 200 9 "C4'" A DC 16 ? ? "C3'" A DC 16 ? ? "C2'" A DC 16 ? ? 97.34 102.20 -4.86 0.70 N 201 9 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 112.37 108.30 4.07 0.30 N 202 9 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 115.53 108.30 7.23 0.30 N 203 9 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.96 108.30 3.66 0.30 N 204 9 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 113.11 108.30 4.81 0.30 N 205 9 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 127.12 119.70 7.42 1.20 Y 206 9 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 113.81 108.30 5.51 0.30 N 207 10 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.84 108.30 3.54 0.30 N 208 10 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.92 108.30 4.62 0.30 N 209 10 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.70 108.30 4.40 0.30 N 210 10 "O4'" A DC 5 ? ? "C1'" A DC 5 ? ? N1 A DC 5 ? ? 111.47 108.30 3.17 0.30 N 211 10 "O4'" A DT 6 ? ? "C1'" A DT 6 ? ? N1 A DT 6 ? ? 110.12 108.30 1.82 0.30 N 212 10 C6 A DT 6 ? ? C5 A DT 6 ? ? C7 A DT 6 ? ? 119.21 122.90 -3.69 0.60 N 213 10 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.83 108.30 3.53 0.30 N 214 10 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 115.37 108.30 7.07 0.30 N 215 10 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.92 108.30 4.62 0.30 N 216 10 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 114.34 108.30 6.04 0.30 N 217 10 "O4'" A DT 12 ? ? "C1'" A DT 12 ? ? N1 A DT 12 ? ? 111.35 108.30 3.05 0.30 N 218 10 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 115.29 108.30 6.99 0.30 N 219 10 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 112.53 108.30 4.23 0.30 N 220 10 "C4'" A DC 16 ? ? "C3'" A DC 16 ? ? "C2'" A DC 16 ? ? 96.97 102.20 -5.23 0.70 N 221 10 "O4'" A DC 16 ? ? "C1'" A DC 16 ? ? N1 A DC 16 ? ? 112.28 108.30 3.98 0.30 N 222 10 "O4'" A DC 17 ? ? "C1'" A DC 17 ? ? N1 A DC 17 ? ? 113.18 108.30 4.88 0.30 N 223 10 "O4'" A DT 18 ? ? "C1'" A DT 18 ? ? N1 A DT 18 ? ? 111.94 108.30 3.64 0.30 N 224 10 "O4'" A DG 19 ? ? "C1'" A DG 19 ? ? N9 A DG 19 ? ? 112.60 108.30 4.30 0.30 N 225 10 "C3'" A DG 19 ? ? "O3'" A DG 19 ? ? P A DG 20 ? ? 127.03 119.70 7.33 1.20 Y 226 10 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 114.71 108.30 6.41 0.30 N 227 10 "O4'" A DG 21 ? ? "C1'" A DG 21 ? ? N9 A DG 21 ? ? 110.11 108.30 1.81 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 1 ? ? 0.080 'SIDE CHAIN' 2 1 DG A 3 ? ? 0.105 'SIDE CHAIN' 3 1 DC A 5 ? ? 0.075 'SIDE CHAIN' 4 1 DG A 9 ? ? 0.075 'SIDE CHAIN' 5 1 DC A 11 ? ? 0.092 'SIDE CHAIN' 6 1 DG A 13 ? ? 0.059 'SIDE CHAIN' 7 1 DG A 14 ? ? 0.075 'SIDE CHAIN' 8 1 DG A 15 ? ? 0.171 'SIDE CHAIN' 9 1 DC A 17 ? ? 0.120 'SIDE CHAIN' 10 1 DG A 19 ? ? 0.090 'SIDE CHAIN' 11 2 DG A 2 ? ? 0.089 'SIDE CHAIN' 12 2 DC A 4 ? ? 0.107 'SIDE CHAIN' 13 2 DT A 6 ? ? 0.066 'SIDE CHAIN' 14 2 DG A 9 ? ? 0.076 'SIDE CHAIN' 15 2 DG A 14 ? ? 0.101 'SIDE CHAIN' 16 2 DG A 15 ? ? 0.138 'SIDE CHAIN' 17 2 DC A 16 ? ? 0.071 'SIDE CHAIN' 18 2 DC A 17 ? ? 0.097 'SIDE CHAIN' 19 2 DG A 19 ? ? 0.095 'SIDE CHAIN' 20 3 DG A 3 ? ? 0.066 'SIDE CHAIN' 21 3 DC A 4 ? ? 0.079 'SIDE CHAIN' 22 3 DC A 5 ? ? 0.069 'SIDE CHAIN' 23 3 DG A 9 ? ? 0.056 'SIDE CHAIN' 24 3 DG A 15 ? ? 0.168 'SIDE CHAIN' 25 3 DT A 18 ? ? 0.103 'SIDE CHAIN' 26 3 DG A 19 ? ? 0.097 'SIDE CHAIN' 27 4 DG A 2 ? ? 0.075 'SIDE CHAIN' 28 4 DG A 3 ? ? 0.071 'SIDE CHAIN' 29 4 DC A 4 ? ? 0.113 'SIDE CHAIN' 30 4 DC A 5 ? ? 0.066 'SIDE CHAIN' 31 4 DG A 7 ? ? 0.063 'SIDE CHAIN' 32 4 DG A 8 ? ? 0.078 'SIDE CHAIN' 33 4 DG A 13 ? ? 0.072 'SIDE CHAIN' 34 4 DG A 14 ? ? 0.100 'SIDE CHAIN' 35 4 DG A 15 ? ? 0.074 'SIDE CHAIN' 36 4 DT A 18 ? ? 0.099 'SIDE CHAIN' 37 4 DG A 19 ? ? 0.067 'SIDE CHAIN' 38 5 DG A 2 ? ? 0.072 'SIDE CHAIN' 39 5 DG A 3 ? ? 0.103 'SIDE CHAIN' 40 5 DC A 4 ? ? 0.122 'SIDE CHAIN' 41 5 DG A 7 ? ? 0.075 'SIDE CHAIN' 42 5 DG A 9 ? ? 0.064 'SIDE CHAIN' 43 5 DC A 10 ? ? 0.066 'SIDE CHAIN' 44 5 DG A 13 ? ? 0.051 'SIDE CHAIN' 45 5 DG A 15 ? ? 0.114 'SIDE CHAIN' 46 5 DC A 16 ? ? 0.104 'SIDE CHAIN' 47 5 DC A 17 ? ? 0.067 'SIDE CHAIN' 48 5 DG A 19 ? ? 0.108 'SIDE CHAIN' 49 6 DG A 2 ? ? 0.085 'SIDE CHAIN' 50 6 DG A 3 ? ? 0.064 'SIDE CHAIN' 51 6 DC A 4 ? ? 0.127 'SIDE CHAIN' 52 6 DC A 5 ? ? 0.130 'SIDE CHAIN' 53 6 DG A 7 ? ? 0.099 'SIDE CHAIN' 54 6 DG A 9 ? ? 0.065 'SIDE CHAIN' 55 6 DG A 15 ? ? 0.051 'SIDE CHAIN' 56 6 DG A 19 ? ? 0.050 'SIDE CHAIN' 57 7 DG A 2 ? ? 0.093 'SIDE CHAIN' 58 7 DG A 3 ? ? 0.077 'SIDE CHAIN' 59 7 DG A 7 ? ? 0.063 'SIDE CHAIN' 60 7 DG A 13 ? ? 0.053 'SIDE CHAIN' 61 7 DG A 15 ? ? 0.147 'SIDE CHAIN' 62 7 DC A 17 ? ? 0.074 'SIDE CHAIN' 63 7 DG A 19 ? ? 0.166 'SIDE CHAIN' 64 8 DG A 1 ? ? 0.060 'SIDE CHAIN' 65 8 DG A 3 ? ? 0.097 'SIDE CHAIN' 66 8 DC A 4 ? ? 0.075 'SIDE CHAIN' 67 8 DG A 7 ? ? 0.082 'SIDE CHAIN' 68 8 DT A 12 ? ? 0.093 'SIDE CHAIN' 69 8 DG A 15 ? ? 0.127 'SIDE CHAIN' 70 8 DC A 16 ? ? 0.061 'SIDE CHAIN' 71 8 DC A 17 ? ? 0.117 'SIDE CHAIN' 72 8 DG A 19 ? ? 0.130 'SIDE CHAIN' 73 9 DG A 2 ? ? 0.072 'SIDE CHAIN' 74 9 DG A 3 ? ? 0.092 'SIDE CHAIN' 75 9 DC A 4 ? ? 0.112 'SIDE CHAIN' 76 9 DT A 6 ? ? 0.095 'SIDE CHAIN' 77 9 DG A 9 ? ? 0.073 'SIDE CHAIN' 78 9 DC A 11 ? ? 0.127 'SIDE CHAIN' 79 9 DG A 15 ? ? 0.138 'SIDE CHAIN' 80 9 DC A 16 ? ? 0.081 'SIDE CHAIN' 81 9 DG A 19 ? ? 0.094 'SIDE CHAIN' 82 10 DG A 2 ? ? 0.082 'SIDE CHAIN' 83 10 DG A 3 ? ? 0.051 'SIDE CHAIN' 84 10 DC A 4 ? ? 0.075 'SIDE CHAIN' 85 10 DG A 7 ? ? 0.077 'SIDE CHAIN' 86 10 DG A 9 ? ? 0.084 'SIDE CHAIN' 87 10 DG A 14 ? ? 0.062 'SIDE CHAIN' 88 10 DG A 15 ? ? 0.136 'SIDE CHAIN' 89 10 DC A 16 ? ? 0.063 'SIDE CHAIN' 90 10 DG A 19 ? ? 0.122 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 8XGP _pdbx_nmr_ensemble.conformers_calculated_total_number 500 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 8XGP _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;0.5 mM DNA (5'-D(*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*G)-3'), 1 mM sodium phosphate, 0.02 mM DSS, 99.96%D2O ; _pdbx_nmr_sample_details.solvent_system 99.96%D2O _pdbx_nmr_sample_details.label mg21 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 ;DNA (5'-D(*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*GP*CP*CP*TP*GP*GP*G)-3') ; 0.5 ? mM 'natural abundance' 1 'sodium phosphate' 1 ? mM 'natural abundance' 1 DSS 0.02 ? mM 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 5.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 1 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 1 1 '2D 1H-1H COSY' 1 isotropic 3 1 1 '2D 1H-1H TOCSY' 1 isotropic 4 1 1 '2D 1H-13C HSQC' 1 isotropic 5 1 1 '2D 1H-15N HSQC' 1 isotropic # _pdbx_nmr_refine.entry_id 8XGP _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 2 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' TopSpin ? 'Bruker Biospin' 2 'structure calculation' Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DC OP3 O N N 1 DC P P N N 2 DC OP1 O N N 3 DC OP2 O N N 4 DC "O5'" O N N 5 DC "C5'" C N N 6 DC "C4'" C N R 7 DC "O4'" O N N 8 DC "C3'" C N S 9 DC "O3'" O N N 10 DC "C2'" C N N 11 DC "C1'" C N R 12 DC N1 N N N 13 DC C2 C N N 14 DC O2 O N N 15 DC N3 N N N 16 DC C4 C N N 17 DC N4 N N N 18 DC C5 C N N 19 DC C6 C N N 20 DC HOP3 H N N 21 DC HOP2 H N N 22 DC "H5'" H N N 23 DC "H5''" H N N 24 DC "H4'" H N N 25 DC "H3'" H N N 26 DC "HO3'" H N N 27 DC "H2'" H N N 28 DC "H2''" H N N 29 DC "H1'" H N N 30 DC H41 H N N 31 DC H42 H N N 32 DC H5 H N N 33 DC H6 H N N 34 DG OP3 O N N 35 DG P P N N 36 DG OP1 O N N 37 DG OP2 O N N 38 DG "O5'" O N N 39 DG "C5'" C N N 40 DG "C4'" C N R 41 DG "O4'" O N N 42 DG "C3'" C N S 43 DG "O3'" O N N 44 DG "C2'" C N N 45 DG "C1'" C N R 46 DG N9 N Y N 47 DG C8 C Y N 48 DG N7 N Y N 49 DG C5 C Y N 50 DG C6 C N N 51 DG O6 O N N 52 DG N1 N N N 53 DG C2 C N N 54 DG N2 N N N 55 DG N3 N N N 56 DG C4 C Y N 57 DG HOP3 H N N 58 DG HOP2 H N N 59 DG "H5'" H N N 60 DG "H5''" H N N 61 DG "H4'" H N N 62 DG "H3'" H N N 63 DG "HO3'" H N N 64 DG "H2'" H N N 65 DG "H2''" H N N 66 DG "H1'" H N N 67 DG H8 H N N 68 DG H1 H N N 69 DG H21 H N N 70 DG H22 H N N 71 DT OP3 O N N 72 DT P P N N 73 DT OP1 O N N 74 DT OP2 O N N 75 DT "O5'" O N N 76 DT "C5'" C N N 77 DT "C4'" C N R 78 DT "O4'" O N N 79 DT "C3'" C N S 80 DT "O3'" O N N 81 DT "C2'" C N N 82 DT "C1'" C N R 83 DT N1 N N N 84 DT C2 C N N 85 DT O2 O N N 86 DT N3 N N N 87 DT C4 C N N 88 DT O4 O N N 89 DT C5 C N N 90 DT C7 C N N 91 DT C6 C N N 92 DT HOP3 H N N 93 DT HOP2 H N N 94 DT "H5'" H N N 95 DT "H5''" H N N 96 DT "H4'" H N N 97 DT "H3'" H N N 98 DT "HO3'" H N N 99 DT "H2'" H N N 100 DT "H2''" H N N 101 DT "H1'" H N N 102 DT H3 H N N 103 DT H71 H N N 104 DT H72 H N N 105 DT H73 H N N 106 DT H6 H N N 107 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DC OP3 P sing N N 1 DC OP3 HOP3 sing N N 2 DC P OP1 doub N N 3 DC P OP2 sing N N 4 DC P "O5'" sing N N 5 DC OP2 HOP2 sing N N 6 DC "O5'" "C5'" sing N N 7 DC "C5'" "C4'" sing N N 8 DC "C5'" "H5'" sing N N 9 DC "C5'" "H5''" sing N N 10 DC "C4'" "O4'" sing N N 11 DC "C4'" "C3'" sing N N 12 DC "C4'" "H4'" sing N N 13 DC "O4'" "C1'" sing N N 14 DC "C3'" "O3'" sing N N 15 DC "C3'" "C2'" sing N N 16 DC "C3'" "H3'" sing N N 17 DC "O3'" "HO3'" sing N N 18 DC "C2'" "C1'" sing N N 19 DC "C2'" "H2'" sing N N 20 DC "C2'" "H2''" sing N N 21 DC "C1'" N1 sing N N 22 DC "C1'" "H1'" sing N N 23 DC N1 C2 sing N N 24 DC N1 C6 sing N N 25 DC C2 O2 doub N N 26 DC C2 N3 sing N N 27 DC N3 C4 doub N N 28 DC C4 N4 sing N N 29 DC C4 C5 sing N N 30 DC N4 H41 sing N N 31 DC N4 H42 sing N N 32 DC C5 C6 doub N N 33 DC C5 H5 sing N N 34 DC C6 H6 sing N N 35 DG OP3 P sing N N 36 DG OP3 HOP3 sing N N 37 DG P OP1 doub N N 38 DG P OP2 sing N N 39 DG P "O5'" sing N N 40 DG OP2 HOP2 sing N N 41 DG "O5'" "C5'" sing N N 42 DG "C5'" "C4'" sing N N 43 DG "C5'" "H5'" sing N N 44 DG "C5'" "H5''" sing N N 45 DG "C4'" "O4'" sing N N 46 DG "C4'" "C3'" sing N N 47 DG "C4'" "H4'" sing N N 48 DG "O4'" "C1'" sing N N 49 DG "C3'" "O3'" sing N N 50 DG "C3'" "C2'" sing N N 51 DG "C3'" "H3'" sing N N 52 DG "O3'" "HO3'" sing N N 53 DG "C2'" "C1'" sing N N 54 DG "C2'" "H2'" sing N N 55 DG "C2'" "H2''" sing N N 56 DG "C1'" N9 sing N N 57 DG "C1'" "H1'" sing N N 58 DG N9 C8 sing Y N 59 DG N9 C4 sing Y N 60 DG C8 N7 doub Y N 61 DG C8 H8 sing N N 62 DG N7 C5 sing Y N 63 DG C5 C6 sing N N 64 DG C5 C4 doub Y N 65 DG C6 O6 doub N N 66 DG C6 N1 sing N N 67 DG N1 C2 sing N N 68 DG N1 H1 sing N N 69 DG C2 N2 sing N N 70 DG C2 N3 doub N N 71 DG N2 H21 sing N N 72 DG N2 H22 sing N N 73 DG N3 C4 sing N N 74 DT OP3 P sing N N 75 DT OP3 HOP3 sing N N 76 DT P OP1 doub N N 77 DT P OP2 sing N N 78 DT P "O5'" sing N N 79 DT OP2 HOP2 sing N N 80 DT "O5'" "C5'" sing N N 81 DT "C5'" "C4'" sing N N 82 DT "C5'" "H5'" sing N N 83 DT "C5'" "H5''" sing N N 84 DT "C4'" "O4'" sing N N 85 DT "C4'" "C3'" sing N N 86 DT "C4'" "H4'" sing N N 87 DT "O4'" "C1'" sing N N 88 DT "C3'" "O3'" sing N N 89 DT "C3'" "C2'" sing N N 90 DT "C3'" "H3'" sing N N 91 DT "O3'" "HO3'" sing N N 92 DT "C2'" "C1'" sing N N 93 DT "C2'" "H2'" sing N N 94 DT "C2'" "H2''" sing N N 95 DT "C1'" N1 sing N N 96 DT "C1'" "H1'" sing N N 97 DT N1 C2 sing N N 98 DT N1 C6 sing N N 99 DT C2 O2 doub N N 100 DT C2 N3 sing N N 101 DT N3 C4 sing N N 102 DT N3 H3 sing N N 103 DT C4 O4 doub N N 104 DT C4 C5 sing N N 105 DT C5 C7 sing N N 106 DT C5 C6 doub N N 107 DT C7 H71 sing N N 108 DT C7 H72 sing N N 109 DT C7 H73 sing N N 110 DT C6 H6 sing N N 111 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8XGP 'double helix' 8XGP 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 11 1_555 -7.084 5.870 0.590 4.461 -7.646 -166.019 1 A_DG1:DC11_A A 1 ? A 11 ? ? 8 1 A DG 21 1_555 A DG 14 1_555 1.985 3.211 -0.077 -0.479 -1.167 -89.391 2 A_DG21:DG14_A A 21 ? A 14 ? 6 3 1 A DG 3 1_555 A DG 8 1_555 1.921 3.341 0.051 -1.291 -6.003 -87.294 3 A_DG3:DG8_A A 3 ? A 8 ? 6 3 1 A DC 17 1_555 A DC 5 1_555 1.789 1.434 0.320 -5.763 6.619 177.690 4 A_DC17:DC5_A A 17 ? A 5 ? 15 2 1 A DG 7 1_555 A DC 4 1_555 -0.487 -0.165 -0.499 -10.363 -6.211 -3.402 5 A_DG7:DC4_A A 7 ? A 4 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DC 11 1_555 A DG 21 1_555 A DG 14 1_555 -3.870 3.094 -2.980 4.971 3.640 41.305 4.701 4.941 -3.133 5.126 -7.000 41.743 1 AA_DG1DG21:DG14DC11_AA A 1 ? A 11 ? A 21 ? A 14 ? 1 A DG 21 1_555 A DG 14 1_555 A DG 3 1_555 A DG 8 1_555 1.180 4.231 -3.432 -160.106 -76.490 -98.221 -2.448 1.286 -0.704 38.379 -80.335 -178.323 2 AA_DG21DG3:DG8DG14_AA A 21 ? A 14 ? A 3 ? A 8 ? 1 A DC 17 1_555 A DC 5 1_555 A DG 7 1_555 A DC 4 1_555 3.558 -0.417 1.543 -57.348 167.776 141.045 -0.410 -1.848 0.940 83.961 28.699 179.102 3 AA_DC17DG7:DC4DC5_AA A 17 ? A 5 ? A 7 ? A 4 ? # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number 22004038 _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 8XGP _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_