HEADER HYDROLASE 10-JAN-24 8XTD TITLE SARS-COV-2 PAPAIN-LIKE-PROTEASE (PLPRO) IN COMPLEX WITH INHIBITOR TITLE 2 LINAGLIPTIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PAPAIN-LIKE PROTEASE (PLPRO); COMPND 5 SYNONYM: PAPAIN-LIKE PROTEINASE, NSP3, PL2-PRO, PL-PRO; COMPND 6 EC: 3.4.19.12, 3.4.22.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: REP, 1A-1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SARS-COV-2, PLPRO, LINAGLIPTIN, NSP3, COMPLEX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.CHOUDHARY,S.VERMA,P.KUMAR,S.TOMAR REVDAT 1 16-JUL-25 8XTD 0 JRNL AUTH S.CHOUDHARY,S.VERMA,P.KUMAR,S.TOMAR JRNL TITL SARS-COV-2 PAPAIN-LIKE-PROTEASE (PLPRO) IN COMPLEX WITH JRNL TITL 2 INHIBITOR LINAGLIPTIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0419 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 14471 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.727 REMARK 3 FREE R VALUE TEST SET COUNT : 684 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 994 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.4100 REMARK 3 BIN FREE R VALUE SET COUNT : 30 REMARK 3 BIN FREE R VALUE : 0.4250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2502 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 71 REMARK 3 SOLVENT ATOMS : 15 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.55300 REMARK 3 B22 (A**2) : 0.55300 REMARK 3 B33 (A**2) : -1.79400 REMARK 3 B12 (A**2) : 0.27600 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.527 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.343 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.315 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.695 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.914 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.828 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2630 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3562 ; 1.968 ; 1.833 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 314 ; 7.376 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 8 ; 7.581 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 436 ;17.644 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 393 ; 0.138 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1969 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1221 ; 0.257 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1776 ; 0.319 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 114 ; 0.176 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1259 ; 4.110 ; 4.315 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1572 ; 6.566 ; 7.736 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1371 ; 5.511 ; 4.699 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1990 ; 8.473 ; 8.511 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE NOT BEEN USED REMARK 4 REMARK 4 8XTD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1300044155. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5-9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : RIGAKU HYPIX-6000HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : CRYSALISPRO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16226 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 23.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL (PH 7.5-9.0), 1.4 M REMARK 280 NAH2PO4, 2-15% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.99000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.49500 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.49500 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 88.99000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 82 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 THR A 198 CA - CB - OG1 ANGL. DEV. = -13.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 49 20.15 -75.52 REMARK 500 PRO A 59 72.35 -63.53 REMARK 500 TYR A 95 75.90 -111.56 REMARK 500 ASN A 99 35.59 37.57 REMARK 500 GLN A 121 21.28 -68.35 REMARK 500 GLN A 122 -11.13 -140.65 REMARK 500 THR A 191 11.41 -141.42 REMARK 500 GLN A 194 101.41 28.01 REMARK 500 PRO A 223 73.69 -58.16 REMARK 500 THR A 225 58.53 -114.94 REMARK 500 CYS A 226 -164.42 -124.69 REMARK 500 LYS A 228 -167.27 144.62 REMARK 500 SER A 239 156.56 177.35 REMARK 500 ALA A 246 157.48 179.10 REMARK 500 HIS A 255 133.40 -32.50 REMARK 500 LYS A 279 -133.13 -127.56 REMARK 500 ASN A 308 -51.77 -160.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8X1X RELATED DB: PDB REMARK 900 SARS-COV-2 PAPAIN-LIKE-PROTEASE (PLPRO) IN COMPLEX WITH INHIBITOR REMARK 900 LITHOCHOLIC ACID DBREF 8XTD A 1 315 UNP P0DTD1 R1AB_SARS2 1564 1878 SEQADV 8XTD SER A 111 UNP P0DTD1 CYS 1674 ENGINEERED MUTATION SEQRES 1 A 315 GLU VAL ARG THR ILE LYS VAL PHE THR THR VAL ASP ASN SEQRES 2 A 315 ILE ASN LEU HIS THR GLN VAL VAL ASP MET SER MET THR SEQRES 3 A 315 TYR GLY GLN GLN PHE GLY PRO THR TYR LEU ASP GLY ALA SEQRES 4 A 315 ASP VAL THR LYS ILE LYS PRO HIS ASN SER HIS GLU GLY SEQRES 5 A 315 LYS THR PHE TYR VAL LEU PRO ASN ASP ASP THR LEU ARG SEQRES 6 A 315 VAL GLU ALA PHE GLU TYR TYR HIS THR THR ASP PRO SER SEQRES 7 A 315 PHE LEU GLY ARG TYR MET SER ALA LEU ASN HIS THR LYS SEQRES 8 A 315 LYS TRP LYS TYR PRO GLN VAL ASN GLY LEU THR SER ILE SEQRES 9 A 315 LYS TRP ALA ASP ASN ASN SER TYR LEU ALA THR ALA LEU SEQRES 10 A 315 LEU THR LEU GLN GLN ILE GLU LEU LYS PHE ASN PRO PRO SEQRES 11 A 315 ALA LEU GLN ASP ALA TYR TYR ARG ALA ARG ALA GLY GLU SEQRES 12 A 315 ALA ALA ASN PHE CYS ALA LEU ILE LEU ALA TYR CYS ASN SEQRES 13 A 315 LYS THR VAL GLY GLU LEU GLY ASP VAL ARG GLU THR MET SEQRES 14 A 315 SER TYR LEU PHE GLN HIS ALA ASN LEU ASP SER CYS LYS SEQRES 15 A 315 ARG VAL LEU ASN VAL VAL CYS LYS THR CYS GLY GLN GLN SEQRES 16 A 315 GLN THR THR LEU LYS GLY VAL GLU ALA VAL MET TYR MET SEQRES 17 A 315 GLY THR LEU SER TYR GLU GLN PHE LYS LYS GLY VAL GLN SEQRES 18 A 315 ILE PRO CYS THR CYS GLY LYS GLN ALA THR LYS TYR LEU SEQRES 19 A 315 VAL GLN GLN GLU SER PRO PHE VAL MET MET SER ALA PRO SEQRES 20 A 315 PRO ALA GLN TYR GLU LEU LYS HIS GLY THR PHE THR CYS SEQRES 21 A 315 ALA SER GLU TYR THR GLY ASN TYR GLN CYS GLY HIS TYR SEQRES 22 A 315 LYS HIS ILE THR SER LYS GLU THR LEU TYR CYS ILE ASP SEQRES 23 A 315 GLY ALA LEU LEU THR LYS SER SER GLU TYR LYS GLY PRO SEQRES 24 A 315 ILE THR ASP VAL PHE TYR LYS GLU ASN SER TYR THR THR SEQRES 25 A 315 THR ILE LYS HET 356 A 401 35 HET GOL A 402 6 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET GOL A 406 6 HET GOL A 407 6 HETNAM 356 8-[(3R)-3-AMINOPIPERIDIN-1-YL]-7-BUT-2-YN-1-YL-3- HETNAM 2 356 METHYL-1-[(4-METHYLQUINAZOLIN-2-YL)METHYL]-3,7- HETNAM 3 356 DIHYDRO-1H-PURINE-2,6-D IONE HETNAM GOL GLYCEROL HETSYN 356 LINAGLIPTIN HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 356 C25 H28 N8 O2 FORMUL 3 GOL 6(C3 H8 O3) FORMUL 9 HOH *15(H2 O) HELIX 1 AA1 HIS A 47 GLU A 51 5 5 HELIX 2 AA2 ASP A 61 HIS A 73 1 13 HELIX 3 AA3 SER A 78 LYS A 91 1 14 HELIX 4 AA4 ASN A 110 GLN A 121 1 12 HELIX 5 AA5 PRO A 129 ALA A 141 1 13 HELIX 6 AA6 ALA A 144 ASN A 156 1 13 HELIX 7 AA7 ASP A 164 HIS A 175 1 12 HELIX 8 AA8 VAL A 202 ALA A 204 5 3 HELIX 9 AA9 SER A 212 GLY A 219 1 8 SHEET 1 AA1 5 HIS A 17 ASP A 22 0 SHEET 2 AA1 5 THR A 4 THR A 10 -1 N ILE A 5 O VAL A 21 SHEET 3 AA1 5 THR A 54 VAL A 57 1 O PHE A 55 N PHE A 8 SHEET 4 AA1 5 THR A 34 LEU A 36 -1 N TYR A 35 O TYR A 56 SHEET 5 AA1 5 ALA A 39 ASP A 40 -1 O ALA A 39 N LEU A 36 SHEET 1 AA2 2 GLN A 97 VAL A 98 0 SHEET 2 AA2 2 LEU A 101 THR A 102 -1 O LEU A 101 N VAL A 98 SHEET 1 AA3 4 GLN A 195 LYS A 200 0 SHEET 2 AA3 4 LYS A 182 VAL A 188 -1 N ARG A 183 O LEU A 199 SHEET 3 AA3 4 ALA A 230 GLU A 238 -1 O GLN A 236 N VAL A 184 SHEET 4 AA3 4 VAL A 220 ILE A 222 -1 N VAL A 220 O LYS A 232 SHEET 1 AA4 4 GLN A 195 LYS A 200 0 SHEET 2 AA4 4 LYS A 182 VAL A 188 -1 N ARG A 183 O LEU A 199 SHEET 3 AA4 4 ALA A 230 GLU A 238 -1 O GLN A 236 N VAL A 184 SHEET 4 AA4 4 SER A 309 THR A 311 -1 O TYR A 310 N GLN A 237 SHEET 1 AA5 7 MET A 206 MET A 208 0 SHEET 2 AA5 7 PHE A 241 LYS A 254 1 O SER A 245 N TYR A 207 SHEET 3 AA5 7 GLU A 295 LYS A 306 -1 O TYR A 296 N LEU A 253 SHEET 4 AA5 7 CYS A 260 GLY A 266 -1 N CYS A 260 O PHE A 304 SHEET 5 AA5 7 GLY A 271 SER A 278 -1 O LYS A 274 N GLU A 263 SHEET 6 AA5 7 LEU A 282 ASP A 286 -1 O ILE A 285 N HIS A 275 SHEET 7 AA5 7 LEU A 289 SER A 293 -1 O LEU A 289 N ASP A 286 CRYST1 81.217 81.217 133.485 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012313 0.007109 0.000000 0.00000 SCALE2 0.000000 0.014217 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007491 0.00000 TER 2503 LYS A 315 HETATM 2504 C1 356 A 401 -27.339 7.047 -51.123 1.00135.61 C0 HETATM 2505 N2 356 A 401 -26.674 7.516 -52.268 1.00124.58 N0 HETATM 2506 C3 356 A 401 -28.484 6.420 -51.557 1.00130.19 C0 HETATM 2507 C4 356 A 401 -27.015 7.134 -49.738 1.00137.57 C0 HETATM 2508 C5 356 A 401 -27.492 7.138 -53.355 1.00123.47 C0 HETATM 2509 C6 356 A 401 -25.396 8.244 -52.264 1.00105.58 C0 HETATM 2510 N7 356 A 401 -28.589 6.447 -52.913 1.00126.77 N0 HETATM 2511 N8 356 A 401 -29.373 5.853 -50.669 1.00113.80 N0 HETATM 2512 N9 356 A 401 -27.958 6.525 -48.880 1.00107.87 N0 HETATM 2513 O10 356 A 401 -26.007 7.658 -49.279 1.00172.30 O0 HETATM 2514 N11 356 A 401 -27.231 7.397 -54.733 1.00106.84 N0 HETATM 2515 C12 356 A 401 -25.488 9.714 -52.222 1.00 89.89 C0 HETATM 2516 C13 356 A 401 -29.125 5.918 -49.315 1.00 91.08 C0 HETATM 2517 C14 356 A 401 -30.587 5.184 -51.147 1.00119.15 C0 HETATM 2518 C15 356 A 401 -27.712 6.533 -47.419 1.00120.50 C0 HETATM 2519 C16 356 A 401 -26.348 8.426 -55.300 1.00 93.16 C0 HETATM 2520 C17 356 A 401 -27.988 6.669 -55.762 1.00102.04 C0 HETATM 2521 C18 356 A 401 -25.663 10.992 -52.232 1.00 78.00 C0 HETATM 2522 O19 356 A 401 -29.893 5.427 -48.511 1.00 92.36 O0 HETATM 2523 C20 356 A 401 -27.033 5.300 -46.849 1.00135.82 C0 HETATM 2524 C21 356 A 401 -27.173 9.521 -56.036 1.00 84.87 C0 HETATM 2525 C22 356 A 401 -28.124 7.445 -57.063 1.00 87.74 C0 HETATM 2526 C23 356 A 401 -25.986 12.429 -52.330 1.00 63.08 C0 HETATM 2527 N24 356 A 401 -25.967 5.484 -46.054 1.00135.25 N0 HETATM 2528 N25 356 A 401 -27.555 4.093 -47.126 1.00140.77 N0 HETATM 2529 C26 356 A 401 -28.348 8.931 -56.813 1.00 77.06 C0 HETATM 2530 N27 356 A 401 -27.648 10.583 -55.136 1.00 80.30 N0 HETATM 2531 C28 356 A 401 -25.350 4.383 -45.510 1.00148.11 C0 HETATM 2532 C29 356 A 401 -26.993 2.985 -46.609 1.00144.29 C0 HETATM 2533 C30 356 A 401 -25.842 3.079 -45.770 1.00154.61 C0 HETATM 2534 C31 356 A 401 -24.213 4.533 -44.687 1.00144.76 C0 HETATM 2535 C32 356 A 401 -27.630 1.679 -46.972 1.00131.62 C0 HETATM 2536 C33 356 A 401 -25.184 1.957 -45.199 1.00157.60 C0 HETATM 2537 C34 356 A 401 -23.605 3.432 -44.153 1.00153.37 C0 HETATM 2538 C35 356 A 401 -24.090 2.137 -44.407 1.00154.14 C0 HETATM 2539 C1 GOL A 402 -43.343 -0.129 -27.672 1.00 47.65 C0 HETATM 2540 O1 GOL A 402 -44.127 -0.092 -28.864 1.00 41.96 O0 HETATM 2541 C2 GOL A 402 -41.858 -0.047 -27.970 1.00 50.19 C0 HETATM 2542 O2 GOL A 402 -41.565 1.084 -28.787 1.00 51.33 O0 HETATM 2543 C3 GOL A 402 -40.989 -0.010 -26.733 1.00 43.80 C0 HETATM 2544 O3 GOL A 402 -40.211 1.180 -26.691 1.00 40.54 O0 HETATM 2545 C1 GOL A 403 -56.475 20.188 -29.610 1.00 62.03 C0 HETATM 2546 O1 GOL A 403 -57.335 19.827 -30.691 1.00 59.02 O0 HETATM 2547 C2 GOL A 403 -55.438 21.217 -30.025 1.00 64.01 C0 HETATM 2548 O2 GOL A 403 -54.419 21.304 -29.028 1.00 55.51 O0 HETATM 2549 C3 GOL A 403 -56.008 22.591 -30.337 1.00 66.54 C0 HETATM 2550 O3 GOL A 403 -56.531 23.237 -29.174 1.00 65.72 O0 HETATM 2551 C1 GOL A 404 -55.298 14.920 -36.698 1.00 68.28 C0 HETATM 2552 O1 GOL A 404 -55.638 14.741 -35.323 1.00 65.15 O0 HETATM 2553 C2 GOL A 404 -55.062 16.380 -37.026 1.00 64.66 C0 HETATM 2554 O2 GOL A 404 -53.702 16.584 -37.407 1.00 55.66 O0 HETATM 2555 C3 GOL A 404 -55.989 16.914 -38.099 1.00 62.07 C0 HETATM 2556 O3 GOL A 404 -55.500 16.595 -39.400 1.00 63.68 O0 HETATM 2557 C1 GOL A 405 -50.709 11.341 -24.738 1.00 58.68 C0 HETATM 2558 O1 GOL A 405 -50.944 10.029 -24.227 1.00 60.10 O0 HETATM 2559 C2 GOL A 405 -51.447 12.401 -23.941 1.00 61.61 C0 HETATM 2560 O2 GOL A 405 -52.831 12.060 -23.834 1.00 77.32 O0 HETATM 2561 C3 GOL A 405 -51.302 13.816 -24.474 1.00 53.55 C0 HETATM 2562 O3 GOL A 405 -50.211 14.512 -23.869 1.00 46.11 O0 HETATM 2563 C1 GOL A 406 -46.878 7.417 -28.178 1.00 58.69 C0 HETATM 2564 O1 GOL A 406 -46.597 7.931 -29.485 1.00 49.79 O0 HETATM 2565 C2 GOL A 406 -47.813 8.263 -27.316 1.00 46.83 C0 HETATM 2566 O2 GOL A 406 -48.188 9.480 -27.948 1.00 41.66 O0 HETATM 2567 C3 GOL A 406 -49.077 7.548 -26.899 1.00 49.38 C0 HETATM 2568 O3 GOL A 406 -49.681 6.873 -28.002 1.00 51.28 O0 HETATM 2569 C1 GOL A 407 -55.039 11.011 -45.697 1.00 57.67 C0 HETATM 2570 O1 GOL A 407 -54.118 12.102 -45.687 1.00 55.84 O0 HETATM 2571 C2 GOL A 407 -55.402 10.581 -44.292 1.00 55.20 C0 HETATM 2572 O2 GOL A 407 -56.697 11.066 -43.949 1.00 54.16 O0 HETATM 2573 C3 GOL A 407 -55.313 9.086 -44.063 1.00 56.85 C0 HETATM 2574 O3 GOL A 407 -55.533 8.753 -42.694 1.00 49.45 O0 HETATM 2575 O HOH A 501 -23.931 6.528 -47.128 1.00 44.77 O0 HETATM 2576 O HOH A 502 -28.107 16.355 -36.925 1.00 28.79 O0 HETATM 2577 O HOH A 503 -40.716 15.184 -26.462 1.00 25.23 O0 HETATM 2578 O HOH A 504 -45.705 25.357 -34.392 1.00 39.60 O0 HETATM 2579 O HOH A 505 -43.476 23.204 -40.778 1.00 26.89 O0 HETATM 2580 O HOH A 506 -34.503 14.993 -58.516 1.00 20.42 O0 HETATM 2581 O HOH A 507 -61.920 27.632 -54.848 1.00 22.20 O0 HETATM 2582 O HOH A 508 -37.676 -1.232 -28.820 1.00 29.62 O0 HETATM 2583 O HOH A 509 -37.162 3.006 -28.612 1.00 16.85 O0 HETATM 2584 O HOH A 510 -30.251 -1.080 -31.772 1.00 18.03 O0 HETATM 2585 O HOH A 511 -38.193 20.691 -10.260 1.00 39.05 O0 HETATM 2586 O HOH A 512 -27.214 -8.431 -21.320 1.00 20.64 O0 HETATM 2587 O HOH A 513 -24.566 13.570 -49.777 1.00 63.64 O0 HETATM 2588 O HOH A 514 -42.058 21.987 -68.262 1.00 17.17 O0 HETATM 2589 O HOH A 515 -40.506 -0.072 -15.961 1.00 30.67 O0 CONECT 2504 2505 2506 2507 CONECT 2505 2504 2508 2509 CONECT 2506 2504 2510 2511 CONECT 2507 2504 2512 2513 CONECT 2508 2505 2510 2514 CONECT 2509 2505 2515 CONECT 2510 2506 2508 CONECT 2511 2506 2516 2517 CONECT 2512 2507 2516 2518 CONECT 2513 2507 CONECT 2514 2508 2519 2520 CONECT 2515 2509 2521 CONECT 2516 2511 2512 2522 CONECT 2517 2511 CONECT 2518 2512 2523 CONECT 2519 2514 2524 CONECT 2520 2514 2525 CONECT 2521 2515 2526 CONECT 2522 2516 CONECT 2523 2518 2527 2528 CONECT 2524 2519 2529 2530 CONECT 2525 2520 2529 CONECT 2526 2521 CONECT 2527 2523 2531 CONECT 2528 2523 2532 CONECT 2529 2524 2525 CONECT 2530 2524 CONECT 2531 2527 2533 2534 CONECT 2532 2528 2533 2535 CONECT 2533 2531 2532 2536 CONECT 2534 2531 2537 CONECT 2535 2532 CONECT 2536 2533 2538 CONECT 2537 2534 2538 CONECT 2538 2536 2537 CONECT 2539 2540 2541 CONECT 2540 2539 CONECT 2541 2539 2542 2543 CONECT 2542 2541 CONECT 2543 2541 2544 CONECT 2544 2543 CONECT 2545 2546 2547 CONECT 2546 2545 CONECT 2547 2545 2548 2549 CONECT 2548 2547 CONECT 2549 2547 2550 CONECT 2550 2549 CONECT 2551 2552 2553 CONECT 2552 2551 CONECT 2553 2551 2554 2555 CONECT 2554 2553 CONECT 2555 2553 2556 CONECT 2556 2555 CONECT 2557 2558 2559 CONECT 2558 2557 CONECT 2559 2557 2560 2561 CONECT 2560 2559 CONECT 2561 2559 2562 CONECT 2562 2561 CONECT 2563 2564 2565 CONECT 2564 2563 CONECT 2565 2563 2566 2567 CONECT 2566 2565 CONECT 2567 2565 2568 CONECT 2568 2567 CONECT 2569 2570 2571 CONECT 2570 2569 CONECT 2571 2569 2572 2573 CONECT 2572 2571 CONECT 2573 2571 2574 CONECT 2574 2573 MASTER 301 0 7 9 22 0 0 6 2588 1 71 25 END