HEADER TRANSPORT PROTEIN 12-JAN-24 8XTX TITLE STRUCTURE OF HUMAN VACHT IN AN APO CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: VESICULAR ACETYLCHOLINE TRANSPORTER,GREEN FLUORESCENT COMPND 3 PROTEIN,ANTIBODY; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: VACHT,SOLUTE CARRIER FAMILY 18 MEMBER 3; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606, 6100; SOURCE 5 GENE: SLC18A3, VACHT, GFP; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293-F KEYWDS TRANSPORTER, MEMBRANE PROTEIN, TRANSPORT PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Y.ZHAO,Q.MA,Y.DONG,Y.MENG REVDAT 3 16-JUL-25 8XTX 1 TITLE COMPND SOURCE REMARK REVDAT 3 2 1 DBREF SEQADV SEQRES HELIX REVDAT 3 3 1 ATOM REVDAT 2 11-JUN-25 8XTX 1 JRNL REVDAT 1 25-DEC-24 8XTX 0 JRNL AUTH Q.MA,K.MA,Y.DONG,Y.MENG,J.ZHAO,R.LI,Q.BAI,D.WU,D.JIANG, JRNL AUTH 2 J.SUN,Y.ZHAO JRNL TITL BINDING MECHANISM AND ANTAGONISM OF THE VESICULAR JRNL TITL 2 ACETYLCHOLINE TRANSPORTER VACHT. JRNL REF NAT.STRUCT.MOL.BIOL. V. 32 818 2025 JRNL REFN ESSN 1545-9985 JRNL PMID 39806024 JRNL DOI 10.1038/S41594-024-01462-9 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.400 REMARK 3 NUMBER OF PARTICLES : 115468 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING ONLY REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8XTX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1300044174. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : TRANSPORTER REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -227 REMARK 465 GLU A -226 REMARK 465 SER A -225 REMARK 465 ALA A -224 REMARK 465 GLU A -223 REMARK 465 PRO A -222 REMARK 465 ALA A -221 REMARK 465 GLY A -220 REMARK 465 GLN A -219 REMARK 465 ALA A -218 REMARK 465 ARG A -217 REMARK 465 ALA A -216 REMARK 465 ALA A -215 REMARK 465 ALA A -214 REMARK 465 THR A -213 REMARK 465 LYS A -212 REMARK 465 LEU A -211 REMARK 465 SER A -210 REMARK 465 GLU A -209 REMARK 465 ALA A -208 REMARK 465 VAL A -207 REMARK 465 GLY A -206 REMARK 465 ALA A -205 REMARK 465 ALA A -204 REMARK 465 LEU A -203 REMARK 465 GLN A -202 REMARK 465 SER A -201 REMARK 465 LYS A -200 REMARK 465 GLY A -199 REMARK 465 GLU A -198 REMARK 465 GLU A -197 REMARK 465 LEU A -196 REMARK 465 PHE A -195 REMARK 465 THR A -194 REMARK 465 GLY A -193 REMARK 465 VAL A -192 REMARK 465 VAL A -191 REMARK 465 PRO A -190 REMARK 465 ILE A -189 REMARK 465 LEU A -188 REMARK 465 VAL A -187 REMARK 465 GLU A -186 REMARK 465 LEU A -185 REMARK 465 ASP A -184 REMARK 465 GLY A -183 REMARK 465 ASP A -182 REMARK 465 VAL A -181 REMARK 465 ASN A -180 REMARK 465 GLY A -179 REMARK 465 HIS A -178 REMARK 465 LYS A -177 REMARK 465 PHE A -176 REMARK 465 SER A -175 REMARK 465 VAL A -174 REMARK 465 ARG A -173 REMARK 465 GLY A -172 REMARK 465 GLU A -171 REMARK 465 GLY A -170 REMARK 465 GLU A -169 REMARK 465 GLY A -168 REMARK 465 ASP A -167 REMARK 465 ALA A -166 REMARK 465 THR A -165 REMARK 465 ASN A -164 REMARK 465 GLY A -163 REMARK 465 LYS A -162 REMARK 465 LEU A -161 REMARK 465 THR A -160 REMARK 465 LEU A -159 REMARK 465 LYS A -158 REMARK 465 PHE A -157 REMARK 465 ILE A -156 REMARK 465 CYS A -155 REMARK 465 THR A -154 REMARK 465 THR A -153 REMARK 465 GLY A -152 REMARK 465 LYS A -151 REMARK 465 LEU A -150 REMARK 465 PRO A -149 REMARK 465 VAL A -148 REMARK 465 PRO A -147 REMARK 465 TRP A -146 REMARK 465 PRO A -145 REMARK 465 THR A -144 REMARK 465 LEU A -143 REMARK 465 VAL A -142 REMARK 465 THR A -141 REMARK 465 THR A -140 REMARK 465 LEU A -139 REMARK 465 THR A -138 REMARK 465 TYR A -137 REMARK 465 GLY A -136 REMARK 465 VAL A -135 REMARK 465 GLN A -134 REMARK 465 CYS A -133 REMARK 465 PHE A -132 REMARK 465 SER A -131 REMARK 465 ARG A -130 REMARK 465 TYR A -129 REMARK 465 PRO A -128 REMARK 465 ASP A -127 REMARK 465 HIS A -126 REMARK 465 MET A -125 REMARK 465 LYS A -124 REMARK 465 ARG A -123 REMARK 465 HIS A -122 REMARK 465 ASP A -121 REMARK 465 PHE A -120 REMARK 465 PHE A -119 REMARK 465 LYS A -118 REMARK 465 SER A -117 REMARK 465 ALA A -116 REMARK 465 MET A -115 REMARK 465 PRO A -114 REMARK 465 GLU A -113 REMARK 465 GLY A -112 REMARK 465 TYR A -111 REMARK 465 VAL A -110 REMARK 465 GLN A -109 REMARK 465 GLU A -108 REMARK 465 ARG A -107 REMARK 465 THR A -106 REMARK 465 ILE A -105 REMARK 465 SER A -104 REMARK 465 PHE A -103 REMARK 465 LYS A -102 REMARK 465 ASP A -101 REMARK 465 ASP A -100 REMARK 465 GLY A -99 REMARK 465 THR A -98 REMARK 465 TYR A -97 REMARK 465 LYS A -96 REMARK 465 THR A -95 REMARK 465 ARG A -94 REMARK 465 ALA A -93 REMARK 465 GLU A -92 REMARK 465 VAL A -91 REMARK 465 LYS A -90 REMARK 465 PHE A -89 REMARK 465 GLU A -88 REMARK 465 GLY A -87 REMARK 465 ASP A -86 REMARK 465 THR A -85 REMARK 465 LEU A -84 REMARK 465 VAL A -83 REMARK 465 ASN A -82 REMARK 465 ARG A -81 REMARK 465 ILE A -80 REMARK 465 GLU A -79 REMARK 465 LEU A -78 REMARK 465 LYS A -77 REMARK 465 GLY A -76 REMARK 465 ILE A -75 REMARK 465 ASP A -74 REMARK 465 PHE A -73 REMARK 465 LYS A -72 REMARK 465 GLU A -71 REMARK 465 ASP A -70 REMARK 465 GLY A -69 REMARK 465 ASN A -68 REMARK 465 ILE A -67 REMARK 465 LEU A -66 REMARK 465 GLY A -65 REMARK 465 HIS A -64 REMARK 465 LYS A -63 REMARK 465 LEU A -62 REMARK 465 GLU A -61 REMARK 465 TYR A -60 REMARK 465 ASN A -59 REMARK 465 PHE A -58 REMARK 465 ASN A -57 REMARK 465 SER A -56 REMARK 465 HIS A -55 REMARK 465 ASN A -54 REMARK 465 VAL A -53 REMARK 465 TYR A -52 REMARK 465 ILE A -51 REMARK 465 THR A -50 REMARK 465 ALA A -49 REMARK 465 ASP A -48 REMARK 465 LYS A -47 REMARK 465 GLN A -46 REMARK 465 LYS A -45 REMARK 465 ASN A -44 REMARK 465 GLY A -43 REMARK 465 ILE A -42 REMARK 465 LYS A -41 REMARK 465 ALA A -40 REMARK 465 ASN A -39 REMARK 465 PHE A -38 REMARK 465 LYS A -37 REMARK 465 ILE A -36 REMARK 465 ARG A -35 REMARK 465 HIS A -34 REMARK 465 ASN A -33 REMARK 465 VAL A -32 REMARK 465 GLU A -31 REMARK 465 ASP A -30 REMARK 465 GLY A -29 REMARK 465 SER A -28 REMARK 465 VAL A -27 REMARK 465 GLN A -26 REMARK 465 LEU A -25 REMARK 465 ALA A -24 REMARK 465 ASP A -23 REMARK 465 HIS A -22 REMARK 465 TYR A -21 REMARK 465 GLN A -20 REMARK 465 GLN A -19 REMARK 465 ASN A -18 REMARK 465 THR A -17 REMARK 465 PRO A -16 REMARK 465 ILE A -15 REMARK 465 GLY A -14 REMARK 465 ASP A -13 REMARK 465 GLY A -12 REMARK 465 PRO A -11 REMARK 465 VAL A -10 REMARK 465 LEU A -9 REMARK 465 LEU A -8 REMARK 465 PRO A -7 REMARK 465 ASP A -6 REMARK 465 ASN A -5 REMARK 465 HIS A -4 REMARK 465 TYR A -3 REMARK 465 LEU A -2 REMARK 465 SER A -1 REMARK 465 THR A 0 REMARK 465 GLN A 1 REMARK 465 SER A 2 REMARK 465 VAL A 3 REMARK 465 LEU A 4 REMARK 465 SER A 5 REMARK 465 LYS A 6 REMARK 465 ASP A 7 REMARK 465 PRO A 8 REMARK 465 ASN A 9 REMARK 465 GLU A 10 REMARK 465 LYS A 11 REMARK 465 ARG A 12 REMARK 465 ASP A 13 REMARK 465 HIS A 14 REMARK 465 MET A 15 REMARK 465 VAL A 16 REMARK 465 LEU A 17 REMARK 465 LEU A 18 REMARK 465 GLU A 19 REMARK 465 PHE A 20 REMARK 465 VAL A 21 REMARK 465 THR A 22 REMARK 465 ALA A 23 REMARK 465 ALA A 24 REMARK 465 GLY A 25 REMARK 465 ILE A 26 REMARK 465 GLU A 27 REMARK 465 PRO A 28 REMARK 465 ARG A 29 REMARK 465 HIS A 63 REMARK 465 MET A 64 REMARK 465 ARG A 65 REMARK 465 GLY A 66 REMARK 465 GLY A 67 REMARK 465 GLY A 68 REMARK 465 GLU A 69 REMARK 465 GLY A 70 REMARK 465 PRO A 71 REMARK 465 THR A 72 REMARK 465 ARG A 73 REMARK 465 THR A 74 REMARK 465 PRO A 75 REMARK 465 GLU A 76 REMARK 465 VAL A 77 REMARK 465 TRP A 78 REMARK 465 GLU A 79 REMARK 465 PRO A 80 REMARK 465 THR A 81 REMARK 465 LEU A 82 REMARK 465 PRO A 83 REMARK 465 LEU A 84 REMARK 465 PRO A 85 REMARK 465 THR A 86 REMARK 465 PRO A 87 REMARK 465 ALA A 88 REMARK 465 ASN A 89 REMARK 465 ALA A 90 REMARK 465 SER A 91 REMARK 465 ALA A 92 REMARK 465 TYR A 93 REMARK 465 THR A 94 REMARK 465 ALA A 95 REMARK 465 ASN A 96 REMARK 465 THR A 97 REMARK 465 SER A 98 REMARK 465 ALA A 99 REMARK 465 SER A 100 REMARK 465 PRO A 101 REMARK 465 THR A 102 REMARK 465 ALA A 103 REMARK 465 ALA A 104 REMARK 465 TRP A 105 REMARK 465 PRO A 106 REMARK 465 ALA A 107 REMARK 465 GLY A 108 REMARK 465 SER A 109 REMARK 465 ALA A 110 REMARK 465 LEU A 111 REMARK 465 ARG A 112 REMARK 465 PRO A 113 REMARK 465 ARG A 114 REMARK 465 TYR A 115 REMARK 465 PRO A 116 REMARK 465 THR A 117 REMARK 465 GLU A 118 REMARK 465 SER A 119 REMARK 465 ALA A 269 REMARK 465 ALA A 270 REMARK 465 ARG A 271 REMARK 465 ALA A 272 REMARK 465 ARG A 273 REMARK 465 ALA A 274 REMARK 465 ASN A 275 REMARK 465 LEU A 276 REMARK 465 GLY A 477 REMARK 465 SER A 478 REMARK 465 GLY A 479 REMARK 465 GLN A 480 REMARK 465 VAL A 481 REMARK 465 GLN A 482 REMARK 465 LEU A 483 REMARK 465 VAL A 484 REMARK 465 GLU A 485 REMARK 465 SER A 486 REMARK 465 GLY A 487 REMARK 465 GLY A 488 REMARK 465 ALA A 489 REMARK 465 LEU A 490 REMARK 465 VAL A 491 REMARK 465 GLN A 492 REMARK 465 PRO A 493 REMARK 465 GLY A 494 REMARK 465 GLY A 495 REMARK 465 SER A 496 REMARK 465 LEU A 497 REMARK 465 ARG A 498 REMARK 465 LEU A 499 REMARK 465 SER A 500 REMARK 465 CYS A 501 REMARK 465 ALA A 502 REMARK 465 ALA A 503 REMARK 465 SER A 504 REMARK 465 GLY A 505 REMARK 465 PHE A 506 REMARK 465 PRO A 507 REMARK 465 VAL A 508 REMARK 465 ASN A 509 REMARK 465 ARG A 510 REMARK 465 TYR A 511 REMARK 465 SER A 512 REMARK 465 MET A 513 REMARK 465 ARG A 514 REMARK 465 TRP A 515 REMARK 465 TYR A 516 REMARK 465 ARG A 517 REMARK 465 GLN A 518 REMARK 465 ALA A 519 REMARK 465 PRO A 520 REMARK 465 GLY A 521 REMARK 465 LYS A 522 REMARK 465 GLU A 523 REMARK 465 ARG A 524 REMARK 465 GLU A 525 REMARK 465 TRP A 526 REMARK 465 VAL A 527 REMARK 465 ALA A 528 REMARK 465 GLY A 529 REMARK 465 MET A 530 REMARK 465 SER A 531 REMARK 465 SER A 532 REMARK 465 ALA A 533 REMARK 465 GLY A 534 REMARK 465 ASP A 535 REMARK 465 ARG A 536 REMARK 465 SER A 537 REMARK 465 SER A 538 REMARK 465 TYR A 539 REMARK 465 GLU A 540 REMARK 465 ASP A 541 REMARK 465 SER A 542 REMARK 465 VAL A 543 REMARK 465 LYS A 544 REMARK 465 GLY A 545 REMARK 465 ARG A 546 REMARK 465 PHE A 547 REMARK 465 THR A 548 REMARK 465 ILE A 549 REMARK 465 SER A 550 REMARK 465 ARG A 551 REMARK 465 ASP A 552 REMARK 465 ASP A 553 REMARK 465 ALA A 554 REMARK 465 ARG A 555 REMARK 465 ASN A 556 REMARK 465 THR A 557 REMARK 465 VAL A 558 REMARK 465 TYR A 559 REMARK 465 LEU A 560 REMARK 465 GLN A 561 REMARK 465 MET A 562 REMARK 465 ASN A 563 REMARK 465 SER A 564 REMARK 465 LEU A 565 REMARK 465 LYS A 566 REMARK 465 PRO A 567 REMARK 465 GLU A 568 REMARK 465 ASP A 569 REMARK 465 THR A 570 REMARK 465 ALA A 571 REMARK 465 VAL A 572 REMARK 465 TYR A 573 REMARK 465 TYR A 574 REMARK 465 CYS A 575 REMARK 465 ASN A 576 REMARK 465 VAL A 577 REMARK 465 ASN A 578 REMARK 465 VAL A 579 REMARK 465 GLY A 580 REMARK 465 PHE A 581 REMARK 465 GLU A 582 REMARK 465 TYR A 583 REMARK 465 TRP A 584 REMARK 465 GLY A 585 REMARK 465 GLN A 586 REMARK 465 GLY A 587 REMARK 465 THR A 588 REMARK 465 GLN A 589 REMARK 465 VAL A 590 REMARK 465 THR A 591 REMARK 465 VAL A 592 REMARK 465 SER A 593 REMARK 465 MET A 594 REMARK 465 GLY A 595 REMARK 465 TRP A 596 REMARK 465 SER A 597 REMARK 465 HIS A 598 REMARK 465 PRO A 599 REMARK 465 GLN A 600 REMARK 465 PHE A 601 REMARK 465 GLU A 602 REMARK 465 LYS A 603 REMARK 465 GLY A 604 REMARK 465 GLY A 605 REMARK 465 GLY A 606 REMARK 465 SER A 607 REMARK 465 GLY A 608 REMARK 465 GLY A 609 REMARK 465 GLY A 610 REMARK 465 SER A 611 REMARK 465 GLY A 612 REMARK 465 GLY A 613 REMARK 465 SER A 614 REMARK 465 ALA A 615 REMARK 465 TRP A 616 REMARK 465 SER A 617 REMARK 465 HIS A 618 REMARK 465 PRO A 619 REMARK 465 GLN A 620 REMARK 465 PHE A 621 REMARK 465 GLU A 622 REMARK 465 LYS A 623 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 58 CA - N - CD ANGL. DEV. = -11.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 31 -123.83 50.47 REMARK 500 ALA A 239 -61.03 -94.07 REMARK 500 PHE A 266 53.35 -90.57 REMARK 500 THR A 319 -4.17 77.46 REMARK 500 ALA A 321 43.21 36.66 REMARK 500 GLU A 326 47.89 -84.36 REMARK 500 MET A 327 -35.78 -130.54 REMARK 500 PRO A 333 49.37 -73.05 REMARK 500 ARG A 378 48.34 -86.36 REMARK 500 THR A 399 41.57 -85.12 REMARK 500 PRO A 436 1.69 -65.71 REMARK 500 PHE A 448 49.87 -82.90 REMARK 500 LEU A 460 46.90 -85.35 REMARK 500 LEU A 468 45.53 -86.44 REMARK 500 LEU A 469 36.15 -140.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-38652 RELATED DB: EMDB REMARK 900 STRUCTURE OF HUMAN VACHT IN AN APO CONFORMATION DBREF 8XTX A -227 -202 UNP Q16572 VACHT_HUMAN 1 26 DBREF 8XTX A -201 26 UNP P42212 GFP_AEQVI 2 229 DBREF 8XTX A 27 476 UNP Q16572 VACHT_HUMAN 27 476 DBREF 8XTX A 477 623 PDB 8XTX 8XTX 477 623 SEQADV 8XTX ARG A -173 UNP P42212 SER 30 ENGINEERED MUTATION SEQADV 8XTX ASN A -164 UNP P42212 TYR 39 ENGINEERED MUTATION SEQADV 8XTX LEU A -139 UNP P42212 PHE 64 ENGINEERED MUTATION SEQADV 8XTX THR A -138 UNP P42212 SER 65 ENGINEERED MUTATION SEQADV 8XTX ARG A -123 UNP P42212 GLN 80 ENGINEERED MUTATION SEQADV 8XTX SER A -104 UNP P42212 PHE 99 ENGINEERED MUTATION SEQADV 8XTX THR A -98 UNP P42212 ASN 105 ENGINEERED MUTATION SEQADV 8XTX PHE A -58 UNP P42212 TYR 145 ENGINEERED MUTATION SEQADV 8XTX THR A -50 UNP P42212 MET 153 ENGINEERED MUTATION SEQADV 8XTX ALA A -40 UNP P42212 VAL 163 ENGINEERED MUTATION SEQADV 8XTX VAL A -32 UNP P42212 ILE 171 ENGINEERED MUTATION SEQADV 8XTX VAL A 3 UNP P42212 ALA 206 ENGINEERED MUTATION SEQRES 1 A 851 MET GLU SER ALA GLU PRO ALA GLY GLN ALA ARG ALA ALA SEQRES 2 A 851 ALA THR LYS LEU SER GLU ALA VAL GLY ALA ALA LEU GLN SEQRES 3 A 851 SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO ILE SEQRES 4 A 851 LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SEQRES 5 A 851 SER VAL ARG GLY GLU GLY GLU GLY ASP ALA THR ASN GLY SEQRES 6 A 851 LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS LEU SEQRES 7 A 851 PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU THR TYR SEQRES 8 A 851 GLY VAL GLN CYS PHE SER ARG TYR PRO ASP HIS MET LYS SEQRES 9 A 851 ARG HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR SEQRES 10 A 851 VAL GLN GLU ARG THR ILE SER PHE LYS ASP ASP GLY THR SEQRES 11 A 851 TYR LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR SEQRES 12 A 851 LEU VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS SEQRES 13 A 851 GLU ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN SEQRES 14 A 851 PHE ASN SER HIS ASN VAL TYR ILE THR ALA ASP LYS GLN SEQRES 15 A 851 LYS ASN GLY ILE LYS ALA ASN PHE LYS ILE ARG HIS ASN SEQRES 16 A 851 VAL GLU ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN SEQRES 17 A 851 GLN ASN THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO SEQRES 18 A 851 ASP ASN HIS TYR LEU SER THR GLN SER VAL LEU SER LYS SEQRES 19 A 851 ASP PRO ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU SEQRES 20 A 851 PHE VAL THR ALA ALA GLY ILE GLU PRO ARG ARG GLN ARG SEQRES 21 A 851 ARG LEU VAL LEU VAL ILE VAL CYS VAL ALA LEU LEU LEU SEQRES 22 A 851 ASP ASN MET LEU TYR MET VAL ILE VAL PRO ILE VAL PRO SEQRES 23 A 851 ASP TYR ILE ALA HIS MET ARG GLY GLY GLY GLU GLY PRO SEQRES 24 A 851 THR ARG THR PRO GLU VAL TRP GLU PRO THR LEU PRO LEU SEQRES 25 A 851 PRO THR PRO ALA ASN ALA SER ALA TYR THR ALA ASN THR SEQRES 26 A 851 SER ALA SER PRO THR ALA ALA TRP PRO ALA GLY SER ALA SEQRES 27 A 851 LEU ARG PRO ARG TYR PRO THR GLU SER GLU ASP VAL LYS SEQRES 28 A 851 ILE GLY VAL LEU PHE ALA SER LYS ALA ILE LEU GLN LEU SEQRES 29 A 851 LEU VAL ASN PRO LEU SER GLY PRO PHE ILE ASP ARG MET SEQRES 30 A 851 SER TYR ASP VAL PRO LEU LEU ILE GLY LEU GLY VAL MET SEQRES 31 A 851 PHE ALA SER THR VAL LEU PHE ALA PHE ALA GLU ASP TYR SEQRES 32 A 851 ALA THR LEU PHE ALA ALA ARG SER LEU GLN GLY LEU GLY SEQRES 33 A 851 SER ALA PHE ALA ASP THR SER GLY ILE ALA MET ILE ALA SEQRES 34 A 851 ASP LYS TYR PRO GLU GLU PRO GLU ARG SER ARG ALA LEU SEQRES 35 A 851 GLY VAL ALA LEU ALA PHE ILE SER PHE GLY SER LEU VAL SEQRES 36 A 851 ALA PRO PRO PHE GLY GLY ILE LEU TYR GLU PHE ALA GLY SEQRES 37 A 851 LYS ARG VAL PRO PHE LEU VAL LEU ALA ALA VAL SER LEU SEQRES 38 A 851 PHE ASP ALA LEU LEU LEU LEU ALA VAL ALA LYS PRO PHE SEQRES 39 A 851 SER ALA ALA ALA ARG ALA ARG ALA ASN LEU PRO VAL GLY SEQRES 40 A 851 THR PRO ILE HIS ARG LEU MET LEU ASP PRO TYR ILE ALA SEQRES 41 A 851 VAL VAL ALA GLY ALA LEU THR THR CYS ASN ILE PRO LEU SEQRES 42 A 851 ALA PHE LEU GLU PRO THR ILE ALA THR TRP MET LYS HIS SEQRES 43 A 851 THR MET ALA ALA SER GLU TRP GLU MET GLY MET ALA TRP SEQRES 44 A 851 LEU PRO ALA PHE VAL PRO HIS VAL LEU GLY VAL TYR LEU SEQRES 45 A 851 THR VAL ARG LEU ALA ALA ARG TYR PRO HIS LEU GLN TRP SEQRES 46 A 851 LEU TYR GLY ALA LEU GLY LEU ALA VAL ILE GLY ALA SER SEQRES 47 A 851 SER CYS ILE VAL PRO ALA CYS ARG SER PHE ALA PRO LEU SEQRES 48 A 851 VAL VAL SER LEU CYS GLY LEU CYS PHE GLY ILE ALA LEU SEQRES 49 A 851 VAL ASP THR ALA LEU LEU PRO THR LEU ALA PHE LEU VAL SEQRES 50 A 851 ASP VAL ARG HIS VAL SER VAL TYR GLY SER VAL TYR ALA SEQRES 51 A 851 ILE ALA ASP ILE SER TYR SER VAL ALA TYR ALA LEU GLY SEQRES 52 A 851 PRO ILE VAL ALA GLY HIS ILE VAL HIS SER LEU GLY PHE SEQRES 53 A 851 GLU GLN LEU SER LEU GLY MET GLY LEU ALA ASN LEU LEU SEQRES 54 A 851 TYR ALA PRO VAL LEU LEU LEU LEU ARG ASN VAL GLY LEU SEQRES 55 A 851 LEU THR GLY SER GLY GLN VAL GLN LEU VAL GLU SER GLY SEQRES 56 A 851 GLY ALA LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER SEQRES 57 A 851 CYS ALA ALA SER GLY PHE PRO VAL ASN ARG TYR SER MET SEQRES 58 A 851 ARG TRP TYR ARG GLN ALA PRO GLY LYS GLU ARG GLU TRP SEQRES 59 A 851 VAL ALA GLY MET SER SER ALA GLY ASP ARG SER SER TYR SEQRES 60 A 851 GLU ASP SER VAL LYS GLY ARG PHE THR ILE SER ARG ASP SEQRES 61 A 851 ASP ALA ARG ASN THR VAL TYR LEU GLN MET ASN SER LEU SEQRES 62 A 851 LYS PRO GLU ASP THR ALA VAL TYR TYR CYS ASN VAL ASN SEQRES 63 A 851 VAL GLY PHE GLU TYR TRP GLY GLN GLY THR GLN VAL THR SEQRES 64 A 851 VAL SER MET GLY TRP SER HIS PRO GLN PHE GLU LYS GLY SEQRES 65 A 851 GLY GLY SER GLY GLY GLY SER GLY GLY SER ALA TRP SER SEQRES 66 A 851 HIS PRO GLN PHE GLU LYS HELIX 1 AA1 GLN A 31 LEU A 49 1 19 HELIX 2 AA2 ILE A 56 TYR A 60 5 5 HELIX 3 AA3 ASP A 121 ALA A 129 1 9 HELIX 4 AA4 ALA A 129 VAL A 138 1 10 HELIX 5 AA5 VAL A 138 ASP A 147 1 10 HELIX 6 AA6 ASP A 152 VAL A 167 1 16 HELIX 7 AA7 ASP A 174 TYR A 204 1 31 HELIX 8 AA8 GLU A 206 LEU A 226 1 21 HELIX 9 AA9 VAL A 227 ALA A 239 1 13 HELIX 10 AB1 ARG A 242 ALA A 263 1 22 HELIX 11 AB2 PRO A 281 MET A 286 1 6 HELIX 12 AB3 ASP A 288 ASN A 302 1 15 HELIX 13 AB4 ASN A 302 GLU A 309 1 8 HELIX 14 AB5 ILE A 312 LYS A 317 1 6 HELIX 15 AB6 GLU A 324 MET A 329 1 6 HELIX 16 AB7 TRP A 331 ALA A 334 5 4 HELIX 17 AB8 PHE A 335 TYR A 352 1 18 HELIX 18 AB9 TRP A 357 VAL A 374 1 18 HELIX 19 AC1 SER A 379 ARG A 412 1 34 HELIX 20 AC2 VAL A 420 SER A 429 1 10 HELIX 21 AC3 VAL A 430 GLY A 447 1 18 HELIX 22 AC4 GLN A 450 LEU A 460 1 11 HELIX 23 AC5 PRO A 464 LEU A 468 5 5 CISPEP 1 GLU A 309 PRO A 310 0 -1.14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MASTER 623 0 0 23 0 0 0 6 2876 1 0 66 END