data_8Y2C # _entry.id 8Y2C # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8Y2C pdb_00008y2c 10.2210/pdb8y2c/pdb WWPDB D_1300044685 ? ? EMDB EMD-38850 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-08-14 2 'Structure model' 1 1 2024-08-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 2 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8Y2C _pdbx_database_status.recvd_initial_deposition_date 2024-01-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'structure of a proteinA' _pdbx_database_related.db_id EMD-38850 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email liyue@ibp.ac.cn _pdbx_contact_author.name_first Yue _pdbx_contact_author.name_last Li _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1211-7383 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhao, Y.' 1 0000-0002-4348-256X 'Li, Y.' 2 0000-0002-1211-7383 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nature _citation.journal_id_ASTM NATUAS _citation.journal_id_CSD 0006 _citation.journal_id_ISSN 1476-4687 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Dopamine reuptake and inhibitory mechanisms in human dopamine transporter.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41586-024-07796-0 _citation.pdbx_database_id_PubMed 39112701 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, Y.' 1 ? primary 'Wang, X.' 2 ? primary 'Meng, Y.' 3 ? primary 'Hu, T.' 4 ? primary 'Zhao, J.' 5 ? primary 'Li, R.' 6 ? primary 'Bai, Q.' 7 ? primary 'Yuan, P.' 8 ? primary 'Han, J.' 9 ? primary 'Hao, K.' 10 ? primary 'Wei, Y.' 11 ? primary 'Qiu, Y.' 12 ? primary 'Li, N.' 13 ? primary 'Zhao, Y.' 14 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Sodium-dependent dopamine transporter' 61590.508 1 ? ? ? ? 2 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DA transporter,DAT,Solute carrier family 6 member 3' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELALGQFNREGAAGVWKICPILKGVGFTV ILISLYVGFFYNVIIAWALHYLFSSFTTELPWIHCNNSWNSPNCSDAHPGDSSGDSSGLNDTFGTTPAAEYFERGVLHLH QSHGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAIDGIRAYLSVDFYRL CEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIVTTSINSLTSFSSGFVVFSFLGYMAQKHSVPIGDVAKD GPGLIFIIYPEAIATLPLSSAWAVVFFIMLLTLGIDSAMGGMESVITGLIDEFQLLHRHRELFTLFIVLATFLLSLFCVT NGGIYVFTLLDHFAAGTSILFGVLIEAIGVAWFYGVGQFSDDIQQMTGQRPSLYWRLCWKLVSPCFLLFVVVVSIVTFRP PHYGAYIFPDWANALGWVIATSSMAMVPIYAAYKFCSLPGSFREKLAYAIAPEKDRELVDRGEVRQFTLRHWLKV ; _entity_poly.pdbx_seq_one_letter_code_can ;KIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELALGQFNREGAAGVWKICPILKGVGFTV ILISLYVGFFYNVIIAWALHYLFSSFTTELPWIHCNNSWNSPNCSDAHPGDSSGDSSGLNDTFGTTPAAEYFERGVLHLH QSHGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAIDGIRAYLSVDFYRL CEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIVTTSINSLTSFSSGFVVFSFLGYMAQKHSVPIGDVAKD GPGLIFIIYPEAIATLPLSSAWAVVFFIMLLTLGIDSAMGGMESVITGLIDEFQLLHRHRELFTLFIVLATFLLSLFCVT NGGIYVFTLLDHFAAGTSILFGVLIEAIGVAWFYGVGQFSDDIQQMTGQRPSLYWRLCWKLVSPCFLLFVVVVSIVTFRP PHYGAYIFPDWANALGWVIATSSMAMVPIYAAYKFCSLPGSFREKLAYAIAPEKDRELVDRGEVRQFTLRHWLKV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 ILE n 1 3 ASP n 1 4 PHE n 1 5 LEU n 1 6 LEU n 1 7 SER n 1 8 VAL n 1 9 ILE n 1 10 GLY n 1 11 PHE n 1 12 ALA n 1 13 VAL n 1 14 ASP n 1 15 LEU n 1 16 ALA n 1 17 ASN n 1 18 VAL n 1 19 TRP n 1 20 ARG n 1 21 PHE n 1 22 PRO n 1 23 TYR n 1 24 LEU n 1 25 CYS n 1 26 TYR n 1 27 LYS n 1 28 ASN n 1 29 GLY n 1 30 GLY n 1 31 GLY n 1 32 ALA n 1 33 PHE n 1 34 LEU n 1 35 VAL n 1 36 PRO n 1 37 TYR n 1 38 LEU n 1 39 LEU n 1 40 PHE n 1 41 MET n 1 42 VAL n 1 43 ILE n 1 44 ALA n 1 45 GLY n 1 46 MET n 1 47 PRO n 1 48 LEU n 1 49 PHE n 1 50 TYR n 1 51 MET n 1 52 GLU n 1 53 LEU n 1 54 ALA n 1 55 LEU n 1 56 GLY n 1 57 GLN n 1 58 PHE n 1 59 ASN n 1 60 ARG n 1 61 GLU n 1 62 GLY n 1 63 ALA n 1 64 ALA n 1 65 GLY n 1 66 VAL n 1 67 TRP n 1 68 LYS n 1 69 ILE n 1 70 CYS n 1 71 PRO n 1 72 ILE n 1 73 LEU n 1 74 LYS n 1 75 GLY n 1 76 VAL n 1 77 GLY n 1 78 PHE n 1 79 THR n 1 80 VAL n 1 81 ILE n 1 82 LEU n 1 83 ILE n 1 84 SER n 1 85 LEU n 1 86 TYR n 1 87 VAL n 1 88 GLY n 1 89 PHE n 1 90 PHE n 1 91 TYR n 1 92 ASN n 1 93 VAL n 1 94 ILE n 1 95 ILE n 1 96 ALA n 1 97 TRP n 1 98 ALA n 1 99 LEU n 1 100 HIS n 1 101 TYR n 1 102 LEU n 1 103 PHE n 1 104 SER n 1 105 SER n 1 106 PHE n 1 107 THR n 1 108 THR n 1 109 GLU n 1 110 LEU n 1 111 PRO n 1 112 TRP n 1 113 ILE n 1 114 HIS n 1 115 CYS n 1 116 ASN n 1 117 ASN n 1 118 SER n 1 119 TRP n 1 120 ASN n 1 121 SER n 1 122 PRO n 1 123 ASN n 1 124 CYS n 1 125 SER n 1 126 ASP n 1 127 ALA n 1 128 HIS n 1 129 PRO n 1 130 GLY n 1 131 ASP n 1 132 SER n 1 133 SER n 1 134 GLY n 1 135 ASP n 1 136 SER n 1 137 SER n 1 138 GLY n 1 139 LEU n 1 140 ASN n 1 141 ASP n 1 142 THR n 1 143 PHE n 1 144 GLY n 1 145 THR n 1 146 THR n 1 147 PRO n 1 148 ALA n 1 149 ALA n 1 150 GLU n 1 151 TYR n 1 152 PHE n 1 153 GLU n 1 154 ARG n 1 155 GLY n 1 156 VAL n 1 157 LEU n 1 158 HIS n 1 159 LEU n 1 160 HIS n 1 161 GLN n 1 162 SER n 1 163 HIS n 1 164 GLY n 1 165 ILE n 1 166 ASP n 1 167 ASP n 1 168 LEU n 1 169 GLY n 1 170 PRO n 1 171 PRO n 1 172 ARG n 1 173 TRP n 1 174 GLN n 1 175 LEU n 1 176 THR n 1 177 ALA n 1 178 CYS n 1 179 LEU n 1 180 VAL n 1 181 LEU n 1 182 VAL n 1 183 ILE n 1 184 VAL n 1 185 LEU n 1 186 LEU n 1 187 TYR n 1 188 PHE n 1 189 SER n 1 190 LEU n 1 191 TRP n 1 192 LYS n 1 193 GLY n 1 194 VAL n 1 195 LYS n 1 196 THR n 1 197 SER n 1 198 GLY n 1 199 LYS n 1 200 VAL n 1 201 VAL n 1 202 TRP n 1 203 ILE n 1 204 THR n 1 205 ALA n 1 206 THR n 1 207 MET n 1 208 PRO n 1 209 TYR n 1 210 VAL n 1 211 VAL n 1 212 LEU n 1 213 THR n 1 214 ALA n 1 215 LEU n 1 216 LEU n 1 217 LEU n 1 218 ARG n 1 219 GLY n 1 220 VAL n 1 221 THR n 1 222 LEU n 1 223 PRO n 1 224 GLY n 1 225 ALA n 1 226 ILE n 1 227 ASP n 1 228 GLY n 1 229 ILE n 1 230 ARG n 1 231 ALA n 1 232 TYR n 1 233 LEU n 1 234 SER n 1 235 VAL n 1 236 ASP n 1 237 PHE n 1 238 TYR n 1 239 ARG n 1 240 LEU n 1 241 CYS n 1 242 GLU n 1 243 ALA n 1 244 SER n 1 245 VAL n 1 246 TRP n 1 247 ILE n 1 248 ASP n 1 249 ALA n 1 250 ALA n 1 251 THR n 1 252 GLN n 1 253 VAL n 1 254 CYS n 1 255 PHE n 1 256 SER n 1 257 LEU n 1 258 GLY n 1 259 VAL n 1 260 GLY n 1 261 PHE n 1 262 GLY n 1 263 VAL n 1 264 LEU n 1 265 ILE n 1 266 ALA n 1 267 PHE n 1 268 SER n 1 269 SER n 1 270 TYR n 1 271 ASN n 1 272 LYS n 1 273 PHE n 1 274 THR n 1 275 ASN n 1 276 ASN n 1 277 CYS n 1 278 TYR n 1 279 ARG n 1 280 ASP n 1 281 ALA n 1 282 ILE n 1 283 VAL n 1 284 THR n 1 285 THR n 1 286 SER n 1 287 ILE n 1 288 ASN n 1 289 SER n 1 290 LEU n 1 291 THR n 1 292 SER n 1 293 PHE n 1 294 SER n 1 295 SER n 1 296 GLY n 1 297 PHE n 1 298 VAL n 1 299 VAL n 1 300 PHE n 1 301 SER n 1 302 PHE n 1 303 LEU n 1 304 GLY n 1 305 TYR n 1 306 MET n 1 307 ALA n 1 308 GLN n 1 309 LYS n 1 310 HIS n 1 311 SER n 1 312 VAL n 1 313 PRO n 1 314 ILE n 1 315 GLY n 1 316 ASP n 1 317 VAL n 1 318 ALA n 1 319 LYS n 1 320 ASP n 1 321 GLY n 1 322 PRO n 1 323 GLY n 1 324 LEU n 1 325 ILE n 1 326 PHE n 1 327 ILE n 1 328 ILE n 1 329 TYR n 1 330 PRO n 1 331 GLU n 1 332 ALA n 1 333 ILE n 1 334 ALA n 1 335 THR n 1 336 LEU n 1 337 PRO n 1 338 LEU n 1 339 SER n 1 340 SER n 1 341 ALA n 1 342 TRP n 1 343 ALA n 1 344 VAL n 1 345 VAL n 1 346 PHE n 1 347 PHE n 1 348 ILE n 1 349 MET n 1 350 LEU n 1 351 LEU n 1 352 THR n 1 353 LEU n 1 354 GLY n 1 355 ILE n 1 356 ASP n 1 357 SER n 1 358 ALA n 1 359 MET n 1 360 GLY n 1 361 GLY n 1 362 MET n 1 363 GLU n 1 364 SER n 1 365 VAL n 1 366 ILE n 1 367 THR n 1 368 GLY n 1 369 LEU n 1 370 ILE n 1 371 ASP n 1 372 GLU n 1 373 PHE n 1 374 GLN n 1 375 LEU n 1 376 LEU n 1 377 HIS n 1 378 ARG n 1 379 HIS n 1 380 ARG n 1 381 GLU n 1 382 LEU n 1 383 PHE n 1 384 THR n 1 385 LEU n 1 386 PHE n 1 387 ILE n 1 388 VAL n 1 389 LEU n 1 390 ALA n 1 391 THR n 1 392 PHE n 1 393 LEU n 1 394 LEU n 1 395 SER n 1 396 LEU n 1 397 PHE n 1 398 CYS n 1 399 VAL n 1 400 THR n 1 401 ASN n 1 402 GLY n 1 403 GLY n 1 404 ILE n 1 405 TYR n 1 406 VAL n 1 407 PHE n 1 408 THR n 1 409 LEU n 1 410 LEU n 1 411 ASP n 1 412 HIS n 1 413 PHE n 1 414 ALA n 1 415 ALA n 1 416 GLY n 1 417 THR n 1 418 SER n 1 419 ILE n 1 420 LEU n 1 421 PHE n 1 422 GLY n 1 423 VAL n 1 424 LEU n 1 425 ILE n 1 426 GLU n 1 427 ALA n 1 428 ILE n 1 429 GLY n 1 430 VAL n 1 431 ALA n 1 432 TRP n 1 433 PHE n 1 434 TYR n 1 435 GLY n 1 436 VAL n 1 437 GLY n 1 438 GLN n 1 439 PHE n 1 440 SER n 1 441 ASP n 1 442 ASP n 1 443 ILE n 1 444 GLN n 1 445 GLN n 1 446 MET n 1 447 THR n 1 448 GLY n 1 449 GLN n 1 450 ARG n 1 451 PRO n 1 452 SER n 1 453 LEU n 1 454 TYR n 1 455 TRP n 1 456 ARG n 1 457 LEU n 1 458 CYS n 1 459 TRP n 1 460 LYS n 1 461 LEU n 1 462 VAL n 1 463 SER n 1 464 PRO n 1 465 CYS n 1 466 PHE n 1 467 LEU n 1 468 LEU n 1 469 PHE n 1 470 VAL n 1 471 VAL n 1 472 VAL n 1 473 VAL n 1 474 SER n 1 475 ILE n 1 476 VAL n 1 477 THR n 1 478 PHE n 1 479 ARG n 1 480 PRO n 1 481 PRO n 1 482 HIS n 1 483 TYR n 1 484 GLY n 1 485 ALA n 1 486 TYR n 1 487 ILE n 1 488 PHE n 1 489 PRO n 1 490 ASP n 1 491 TRP n 1 492 ALA n 1 493 ASN n 1 494 ALA n 1 495 LEU n 1 496 GLY n 1 497 TRP n 1 498 VAL n 1 499 ILE n 1 500 ALA n 1 501 THR n 1 502 SER n 1 503 SER n 1 504 MET n 1 505 ALA n 1 506 MET n 1 507 VAL n 1 508 PRO n 1 509 ILE n 1 510 TYR n 1 511 ALA n 1 512 ALA n 1 513 TYR n 1 514 LYS n 1 515 PHE n 1 516 CYS n 1 517 SER n 1 518 LEU n 1 519 PRO n 1 520 GLY n 1 521 SER n 1 522 PHE n 1 523 ARG n 1 524 GLU n 1 525 LYS n 1 526 LEU n 1 527 ALA n 1 528 TYR n 1 529 ALA n 1 530 ILE n 1 531 ALA n 1 532 PRO n 1 533 GLU n 1 534 LYS n 1 535 ASP n 1 536 ARG n 1 537 GLU n 1 538 LEU n 1 539 VAL n 1 540 ASP n 1 541 ARG n 1 542 GLY n 1 543 GLU n 1 544 VAL n 1 545 ARG n 1 546 GLN n 1 547 PHE n 1 548 THR n 1 549 LEU n 1 550 ARG n 1 551 HIS n 1 552 TRP n 1 553 LEU n 1 554 LYS n 1 555 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 555 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SLC6A3, DAT1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name human _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 66 66 LYS LYS A . n A 1 2 ILE 2 67 67 ILE ILE A . n A 1 3 ASP 3 68 68 ASP ASP A . n A 1 4 PHE 4 69 69 PHE PHE A . n A 1 5 LEU 5 70 70 LEU LEU A . n A 1 6 LEU 6 71 71 LEU LEU A . n A 1 7 SER 7 72 72 SER SER A . n A 1 8 VAL 8 73 73 VAL VAL A . n A 1 9 ILE 9 74 74 ILE ILE A . n A 1 10 GLY 10 75 75 GLY GLY A . n A 1 11 PHE 11 76 76 PHE PHE A . n A 1 12 ALA 12 77 77 ALA ALA A . n A 1 13 VAL 13 78 78 VAL VAL A . n A 1 14 ASP 14 79 79 ASP ASP A . n A 1 15 LEU 15 80 80 LEU LEU A . n A 1 16 ALA 16 81 81 ALA ALA A . n A 1 17 ASN 17 82 82 ASN ASN A . n A 1 18 VAL 18 83 83 VAL VAL A . n A 1 19 TRP 19 84 84 TRP TRP A . n A 1 20 ARG 20 85 85 ARG ARG A . n A 1 21 PHE 21 86 86 PHE PHE A . n A 1 22 PRO 22 87 87 PRO PRO A . n A 1 23 TYR 23 88 88 TYR TYR A . n A 1 24 LEU 24 89 89 LEU LEU A . n A 1 25 CYS 25 90 90 CYS CYS A . n A 1 26 TYR 26 91 91 TYR TYR A . n A 1 27 LYS 27 92 92 LYS LYS A . n A 1 28 ASN 28 93 93 ASN ASN A . n A 1 29 GLY 29 94 94 GLY GLY A . n A 1 30 GLY 30 95 95 GLY GLY A . n A 1 31 GLY 31 96 96 GLY GLY A . n A 1 32 ALA 32 97 97 ALA ALA A . n A 1 33 PHE 33 98 98 PHE PHE A . n A 1 34 LEU 34 99 99 LEU LEU A . n A 1 35 VAL 35 100 100 VAL VAL A . n A 1 36 PRO 36 101 101 PRO PRO A . n A 1 37 TYR 37 102 102 TYR TYR A . n A 1 38 LEU 38 103 103 LEU LEU A . n A 1 39 LEU 39 104 104 LEU LEU A . n A 1 40 PHE 40 105 105 PHE PHE A . n A 1 41 MET 41 106 106 MET MET A . n A 1 42 VAL 42 107 107 VAL VAL A . n A 1 43 ILE 43 108 108 ILE ILE A . n A 1 44 ALA 44 109 109 ALA ALA A . n A 1 45 GLY 45 110 110 GLY GLY A . n A 1 46 MET 46 111 111 MET MET A . n A 1 47 PRO 47 112 112 PRO PRO A . n A 1 48 LEU 48 113 113 LEU LEU A . n A 1 49 PHE 49 114 114 PHE PHE A . n A 1 50 TYR 50 115 115 TYR TYR A . n A 1 51 MET 51 116 116 MET MET A . n A 1 52 GLU 52 117 117 GLU GLU A . n A 1 53 LEU 53 118 118 LEU LEU A . n A 1 54 ALA 54 119 119 ALA ALA A . n A 1 55 LEU 55 120 120 LEU LEU A . n A 1 56 GLY 56 121 121 GLY GLY A . n A 1 57 GLN 57 122 122 GLN GLN A . n A 1 58 PHE 58 123 123 PHE PHE A . n A 1 59 ASN 59 124 124 ASN ASN A . n A 1 60 ARG 60 125 125 ARG ARG A . n A 1 61 GLU 61 126 126 GLU GLU A . n A 1 62 GLY 62 127 127 GLY GLY A . n A 1 63 ALA 63 128 128 ALA ALA A . n A 1 64 ALA 64 129 129 ALA ALA A . n A 1 65 GLY 65 130 130 GLY GLY A . n A 1 66 VAL 66 131 131 VAL VAL A . n A 1 67 TRP 67 132 132 TRP TRP A . n A 1 68 LYS 68 133 133 LYS LYS A . n A 1 69 ILE 69 134 134 ILE ILE A . n A 1 70 CYS 70 135 135 CYS CYS A . n A 1 71 PRO 71 136 136 PRO PRO A . n A 1 72 ILE 72 137 137 ILE ILE A . n A 1 73 LEU 73 138 138 LEU LEU A . n A 1 74 LYS 74 139 139 LYS LYS A . n A 1 75 GLY 75 140 140 GLY GLY A . n A 1 76 VAL 76 141 141 VAL VAL A . n A 1 77 GLY 77 142 142 GLY GLY A . n A 1 78 PHE 78 143 143 PHE PHE A . n A 1 79 THR 79 144 144 THR THR A . n A 1 80 VAL 80 145 145 VAL VAL A . n A 1 81 ILE 81 146 146 ILE ILE A . n A 1 82 LEU 82 147 147 LEU LEU A . n A 1 83 ILE 83 148 148 ILE ILE A . n A 1 84 SER 84 149 149 SER SER A . n A 1 85 LEU 85 150 150 LEU LEU A . n A 1 86 TYR 86 151 151 TYR TYR A . n A 1 87 VAL 87 152 152 VAL VAL A . n A 1 88 GLY 88 153 153 GLY GLY A . n A 1 89 PHE 89 154 154 PHE PHE A . n A 1 90 PHE 90 155 155 PHE PHE A . n A 1 91 TYR 91 156 156 TYR TYR A . n A 1 92 ASN 92 157 157 ASN ASN A . n A 1 93 VAL 93 158 158 VAL VAL A . n A 1 94 ILE 94 159 159 ILE ILE A . n A 1 95 ILE 95 160 160 ILE ILE A . n A 1 96 ALA 96 161 161 ALA ALA A . n A 1 97 TRP 97 162 162 TRP TRP A . n A 1 98 ALA 98 163 163 ALA ALA A . n A 1 99 LEU 99 164 164 LEU LEU A . n A 1 100 HIS 100 165 165 HIS HIS A . n A 1 101 TYR 101 166 166 TYR TYR A . n A 1 102 LEU 102 167 167 LEU LEU A . n A 1 103 PHE 103 168 168 PHE PHE A . n A 1 104 SER 104 169 169 SER SER A . n A 1 105 SER 105 170 170 SER SER A . n A 1 106 PHE 106 171 171 PHE PHE A . n A 1 107 THR 107 172 172 THR THR A . n A 1 108 THR 108 173 173 THR THR A . n A 1 109 GLU 109 174 174 GLU GLU A . n A 1 110 LEU 110 175 175 LEU LEU A . n A 1 111 PRO 111 176 176 PRO PRO A . n A 1 112 TRP 112 177 177 TRP TRP A . n A 1 113 ILE 113 178 178 ILE ILE A . n A 1 114 HIS 114 179 179 HIS HIS A . n A 1 115 CYS 115 180 180 CYS CYS A . n A 1 116 ASN 116 181 181 ASN ASN A . n A 1 117 ASN 117 182 182 ASN ASN A . n A 1 118 SER 118 183 183 SER SER A . n A 1 119 TRP 119 184 184 TRP TRP A . n A 1 120 ASN 120 185 185 ASN ASN A . n A 1 121 SER 121 186 186 SER SER A . n A 1 122 PRO 122 187 187 PRO PRO A . n A 1 123 ASN 123 188 188 ASN ASN A . n A 1 124 CYS 124 189 189 CYS CYS A . n A 1 125 SER 125 190 190 SER SER A . n A 1 126 ASP 126 191 191 ASP ASP A . n A 1 127 ALA 127 192 ? ? ? A . n A 1 128 HIS 128 193 ? ? ? A . n A 1 129 PRO 129 194 ? ? ? A . n A 1 130 GLY 130 195 ? ? ? A . n A 1 131 ASP 131 196 ? ? ? A . n A 1 132 SER 132 197 ? ? ? A . n A 1 133 SER 133 198 ? ? ? A . n A 1 134 GLY 134 199 ? ? ? A . n A 1 135 ASP 135 200 ? ? ? A . n A 1 136 SER 136 201 ? ? ? A . n A 1 137 SER 137 202 ? ? ? A . n A 1 138 GLY 138 203 ? ? ? A . n A 1 139 LEU 139 204 ? ? ? A . n A 1 140 ASN 140 205 ? ? ? A . n A 1 141 ASP 141 206 ? ? ? A . n A 1 142 THR 142 207 ? ? ? A . n A 1 143 PHE 143 208 ? ? ? A . n A 1 144 GLY 144 209 209 GLY GLY A . n A 1 145 THR 145 210 210 THR THR A . n A 1 146 THR 146 211 211 THR THR A . n A 1 147 PRO 147 212 212 PRO PRO A . n A 1 148 ALA 148 213 213 ALA ALA A . n A 1 149 ALA 149 214 214 ALA ALA A . n A 1 150 GLU 150 215 215 GLU GLU A . n A 1 151 TYR 151 216 216 TYR TYR A . n A 1 152 PHE 152 217 217 PHE PHE A . n A 1 153 GLU 153 218 218 GLU GLU A . n A 1 154 ARG 154 219 219 ARG ARG A . n A 1 155 GLY 155 220 220 GLY GLY A . n A 1 156 VAL 156 221 221 VAL VAL A . n A 1 157 LEU 157 222 222 LEU LEU A . n A 1 158 HIS 158 223 223 HIS HIS A . n A 1 159 LEU 159 224 224 LEU LEU A . n A 1 160 HIS 160 225 225 HIS HIS A . n A 1 161 GLN 161 226 226 GLN GLN A . n A 1 162 SER 162 227 227 SER SER A . n A 1 163 HIS 163 228 228 HIS HIS A . n A 1 164 GLY 164 229 229 GLY GLY A . n A 1 165 ILE 165 230 230 ILE ILE A . n A 1 166 ASP 166 231 231 ASP ASP A . n A 1 167 ASP 167 232 232 ASP ASP A . n A 1 168 LEU 168 233 233 LEU LEU A . n A 1 169 GLY 169 234 234 GLY GLY A . n A 1 170 PRO 170 235 235 PRO PRO A . n A 1 171 PRO 171 236 236 PRO PRO A . n A 1 172 ARG 172 237 237 ARG ARG A . n A 1 173 TRP 173 238 238 TRP TRP A . n A 1 174 GLN 174 239 239 GLN GLN A . n A 1 175 LEU 175 240 240 LEU LEU A . n A 1 176 THR 176 241 241 THR THR A . n A 1 177 ALA 177 242 242 ALA ALA A . n A 1 178 CYS 178 243 243 CYS CYS A . n A 1 179 LEU 179 244 244 LEU LEU A . n A 1 180 VAL 180 245 245 VAL VAL A . n A 1 181 LEU 181 246 246 LEU LEU A . n A 1 182 VAL 182 247 247 VAL VAL A . n A 1 183 ILE 183 248 248 ILE ILE A . n A 1 184 VAL 184 249 249 VAL VAL A . n A 1 185 LEU 185 250 250 LEU LEU A . n A 1 186 LEU 186 251 251 LEU LEU A . n A 1 187 TYR 187 252 252 TYR TYR A . n A 1 188 PHE 188 253 253 PHE PHE A . n A 1 189 SER 189 254 254 SER SER A . n A 1 190 LEU 190 255 255 LEU LEU A . n A 1 191 TRP 191 256 256 TRP TRP A . n A 1 192 LYS 192 257 ? ? ? A . n A 1 193 GLY 193 258 ? ? ? A . n A 1 194 VAL 194 259 ? ? ? A . n A 1 195 LYS 195 260 ? ? ? A . n A 1 196 THR 196 261 ? ? ? A . n A 1 197 SER 197 262 ? ? ? A . n A 1 198 GLY 198 263 ? ? ? A . n A 1 199 LYS 199 264 ? ? ? A . n A 1 200 VAL 200 265 ? ? ? A . n A 1 201 VAL 201 266 266 VAL VAL A . n A 1 202 TRP 202 267 267 TRP TRP A . n A 1 203 ILE 203 268 268 ILE ILE A . n A 1 204 THR 204 269 269 THR THR A . n A 1 205 ALA 205 270 270 ALA ALA A . n A 1 206 THR 206 271 271 THR THR A . n A 1 207 MET 207 272 272 MET MET A . n A 1 208 PRO 208 273 273 PRO PRO A . n A 1 209 TYR 209 274 274 TYR TYR A . n A 1 210 VAL 210 275 275 VAL VAL A . n A 1 211 VAL 211 276 276 VAL VAL A . n A 1 212 LEU 212 277 277 LEU LEU A . n A 1 213 THR 213 278 278 THR THR A . n A 1 214 ALA 214 279 279 ALA ALA A . n A 1 215 LEU 215 280 280 LEU LEU A . n A 1 216 LEU 216 281 281 LEU LEU A . n A 1 217 LEU 217 282 282 LEU LEU A . n A 1 218 ARG 218 283 283 ARG ARG A . n A 1 219 GLY 219 284 284 GLY GLY A . n A 1 220 VAL 220 285 285 VAL VAL A . n A 1 221 THR 221 286 286 THR THR A . n A 1 222 LEU 222 287 287 LEU LEU A . n A 1 223 PRO 223 288 288 PRO PRO A . n A 1 224 GLY 224 289 289 GLY GLY A . n A 1 225 ALA 225 290 290 ALA ALA A . n A 1 226 ILE 226 291 291 ILE ILE A . n A 1 227 ASP 227 292 292 ASP ASP A . n A 1 228 GLY 228 293 293 GLY GLY A . n A 1 229 ILE 229 294 294 ILE ILE A . n A 1 230 ARG 230 295 295 ARG ARG A . n A 1 231 ALA 231 296 296 ALA ALA A . n A 1 232 TYR 232 297 297 TYR TYR A . n A 1 233 LEU 233 298 298 LEU LEU A . n A 1 234 SER 234 299 299 SER SER A . n A 1 235 VAL 235 300 300 VAL VAL A . n A 1 236 ASP 236 301 301 ASP ASP A . n A 1 237 PHE 237 302 302 PHE PHE A . n A 1 238 TYR 238 303 303 TYR TYR A . n A 1 239 ARG 239 304 304 ARG ARG A . n A 1 240 LEU 240 305 305 LEU LEU A . n A 1 241 CYS 241 306 306 CYS CYS A . n A 1 242 GLU 242 307 307 GLU GLU A . n A 1 243 ALA 243 308 308 ALA ALA A . n A 1 244 SER 244 309 309 SER SER A . n A 1 245 VAL 245 310 310 VAL VAL A . n A 1 246 TRP 246 311 311 TRP TRP A . n A 1 247 ILE 247 312 312 ILE ILE A . n A 1 248 ASP 248 313 313 ASP ASP A . n A 1 249 ALA 249 314 314 ALA ALA A . n A 1 250 ALA 250 315 315 ALA ALA A . n A 1 251 THR 251 316 316 THR THR A . n A 1 252 GLN 252 317 317 GLN GLN A . n A 1 253 VAL 253 318 318 VAL VAL A . n A 1 254 CYS 254 319 319 CYS CYS A . n A 1 255 PHE 255 320 320 PHE PHE A . n A 1 256 SER 256 321 321 SER SER A . n A 1 257 LEU 257 322 322 LEU LEU A . n A 1 258 GLY 258 323 323 GLY GLY A . n A 1 259 VAL 259 324 324 VAL VAL A . n A 1 260 GLY 260 325 325 GLY GLY A . n A 1 261 PHE 261 326 326 PHE PHE A . n A 1 262 GLY 262 327 327 GLY GLY A . n A 1 263 VAL 263 328 328 VAL VAL A . n A 1 264 LEU 264 329 329 LEU LEU A . n A 1 265 ILE 265 330 330 ILE ILE A . n A 1 266 ALA 266 331 331 ALA ALA A . n A 1 267 PHE 267 332 332 PHE PHE A . n A 1 268 SER 268 333 333 SER SER A . n A 1 269 SER 269 334 334 SER SER A . n A 1 270 TYR 270 335 335 TYR TYR A . n A 1 271 ASN 271 336 336 ASN ASN A . n A 1 272 LYS 272 337 337 LYS LYS A . n A 1 273 PHE 273 338 338 PHE PHE A . n A 1 274 THR 274 339 339 THR THR A . n A 1 275 ASN 275 340 340 ASN ASN A . n A 1 276 ASN 276 341 341 ASN ASN A . n A 1 277 CYS 277 342 342 CYS CYS A . n A 1 278 TYR 278 343 343 TYR TYR A . n A 1 279 ARG 279 344 344 ARG ARG A . n A 1 280 ASP 280 345 345 ASP ASP A . n A 1 281 ALA 281 346 346 ALA ALA A . n A 1 282 ILE 282 347 347 ILE ILE A . n A 1 283 VAL 283 348 348 VAL VAL A . n A 1 284 THR 284 349 349 THR THR A . n A 1 285 THR 285 350 350 THR THR A . n A 1 286 SER 286 351 351 SER SER A . n A 1 287 ILE 287 352 352 ILE ILE A . n A 1 288 ASN 288 353 353 ASN ASN A . n A 1 289 SER 289 354 354 SER SER A . n A 1 290 LEU 290 355 355 LEU LEU A . n A 1 291 THR 291 356 356 THR THR A . n A 1 292 SER 292 357 357 SER SER A . n A 1 293 PHE 293 358 358 PHE PHE A . n A 1 294 SER 294 359 359 SER SER A . n A 1 295 SER 295 360 360 SER SER A . n A 1 296 GLY 296 361 361 GLY GLY A . n A 1 297 PHE 297 362 362 PHE PHE A . n A 1 298 VAL 298 363 363 VAL VAL A . n A 1 299 VAL 299 364 364 VAL VAL A . n A 1 300 PHE 300 365 365 PHE PHE A . n A 1 301 SER 301 366 366 SER SER A . n A 1 302 PHE 302 367 367 PHE PHE A . n A 1 303 LEU 303 368 368 LEU LEU A . n A 1 304 GLY 304 369 369 GLY GLY A . n A 1 305 TYR 305 370 370 TYR TYR A . n A 1 306 MET 306 371 371 MET MET A . n A 1 307 ALA 307 372 372 ALA ALA A . n A 1 308 GLN 308 373 373 GLN GLN A . n A 1 309 LYS 309 374 374 LYS LYS A . n A 1 310 HIS 310 375 375 HIS HIS A . n A 1 311 SER 311 376 376 SER SER A . n A 1 312 VAL 312 377 377 VAL VAL A . n A 1 313 PRO 313 378 378 PRO PRO A . n A 1 314 ILE 314 379 379 ILE ILE A . n A 1 315 GLY 315 380 380 GLY GLY A . n A 1 316 ASP 316 381 381 ASP ASP A . n A 1 317 VAL 317 382 382 VAL VAL A . n A 1 318 ALA 318 383 383 ALA ALA A . n A 1 319 LYS 319 384 384 LYS LYS A . n A 1 320 ASP 320 385 385 ASP ASP A . n A 1 321 GLY 321 386 386 GLY GLY A . n A 1 322 PRO 322 387 387 PRO PRO A . n A 1 323 GLY 323 388 388 GLY GLY A . n A 1 324 LEU 324 389 389 LEU LEU A . n A 1 325 ILE 325 390 390 ILE ILE A . n A 1 326 PHE 326 391 391 PHE PHE A . n A 1 327 ILE 327 392 392 ILE ILE A . n A 1 328 ILE 328 393 393 ILE ILE A . n A 1 329 TYR 329 394 394 TYR TYR A . n A 1 330 PRO 330 395 395 PRO PRO A . n A 1 331 GLU 331 396 396 GLU GLU A . n A 1 332 ALA 332 397 397 ALA ALA A . n A 1 333 ILE 333 398 398 ILE ILE A . n A 1 334 ALA 334 399 399 ALA ALA A . n A 1 335 THR 335 400 400 THR THR A . n A 1 336 LEU 336 401 401 LEU LEU A . n A 1 337 PRO 337 402 402 PRO PRO A . n A 1 338 LEU 338 403 403 LEU LEU A . n A 1 339 SER 339 404 404 SER SER A . n A 1 340 SER 340 405 405 SER SER A . n A 1 341 ALA 341 406 406 ALA ALA A . n A 1 342 TRP 342 407 407 TRP TRP A . n A 1 343 ALA 343 408 408 ALA ALA A . n A 1 344 VAL 344 409 409 VAL VAL A . n A 1 345 VAL 345 410 410 VAL VAL A . n A 1 346 PHE 346 411 411 PHE PHE A . n A 1 347 PHE 347 412 412 PHE PHE A . n A 1 348 ILE 348 413 413 ILE ILE A . n A 1 349 MET 349 414 414 MET MET A . n A 1 350 LEU 350 415 415 LEU LEU A . n A 1 351 LEU 351 416 416 LEU LEU A . n A 1 352 THR 352 417 417 THR THR A . n A 1 353 LEU 353 418 418 LEU LEU A . n A 1 354 GLY 354 419 419 GLY GLY A . n A 1 355 ILE 355 420 420 ILE ILE A . n A 1 356 ASP 356 421 421 ASP ASP A . n A 1 357 SER 357 422 422 SER SER A . n A 1 358 ALA 358 423 423 ALA ALA A . n A 1 359 MET 359 424 424 MET MET A . n A 1 360 GLY 360 425 425 GLY GLY A . n A 1 361 GLY 361 426 426 GLY GLY A . n A 1 362 MET 362 427 427 MET MET A . n A 1 363 GLU 363 428 428 GLU GLU A . n A 1 364 SER 364 429 429 SER SER A . n A 1 365 VAL 365 430 430 VAL VAL A . n A 1 366 ILE 366 431 431 ILE ILE A . n A 1 367 THR 367 432 432 THR THR A . n A 1 368 GLY 368 433 433 GLY GLY A . n A 1 369 LEU 369 434 434 LEU LEU A . n A 1 370 ILE 370 435 435 ILE ILE A . n A 1 371 ASP 371 436 436 ASP ASP A . n A 1 372 GLU 372 437 437 GLU GLU A . n A 1 373 PHE 373 438 438 PHE PHE A . n A 1 374 GLN 374 439 439 GLN GLN A . n A 1 375 LEU 375 440 440 LEU LEU A . n A 1 376 LEU 376 441 441 LEU LEU A . n A 1 377 HIS 377 442 442 HIS HIS A . n A 1 378 ARG 378 443 443 ARG ARG A . n A 1 379 HIS 379 444 444 HIS HIS A . n A 1 380 ARG 380 445 445 ARG ARG A . n A 1 381 GLU 381 446 446 GLU GLU A . n A 1 382 LEU 382 447 447 LEU LEU A . n A 1 383 PHE 383 448 448 PHE PHE A . n A 1 384 THR 384 449 449 THR THR A . n A 1 385 LEU 385 450 450 LEU LEU A . n A 1 386 PHE 386 451 451 PHE PHE A . n A 1 387 ILE 387 452 452 ILE ILE A . n A 1 388 VAL 388 453 453 VAL VAL A . n A 1 389 LEU 389 454 454 LEU LEU A . n A 1 390 ALA 390 455 455 ALA ALA A . n A 1 391 THR 391 456 456 THR THR A . n A 1 392 PHE 392 457 457 PHE PHE A . n A 1 393 LEU 393 458 458 LEU LEU A . n A 1 394 LEU 394 459 459 LEU LEU A . n A 1 395 SER 395 460 460 SER SER A . n A 1 396 LEU 396 461 461 LEU LEU A . n A 1 397 PHE 397 462 462 PHE PHE A . n A 1 398 CYS 398 463 463 CYS CYS A . n A 1 399 VAL 399 464 464 VAL VAL A . n A 1 400 THR 400 465 465 THR THR A . n A 1 401 ASN 401 466 466 ASN ASN A . n A 1 402 GLY 402 467 467 GLY GLY A . n A 1 403 GLY 403 468 468 GLY GLY A . n A 1 404 ILE 404 469 469 ILE ILE A . n A 1 405 TYR 405 470 470 TYR TYR A . n A 1 406 VAL 406 471 471 VAL VAL A . n A 1 407 PHE 407 472 472 PHE PHE A . n A 1 408 THR 408 473 473 THR THR A . n A 1 409 LEU 409 474 474 LEU LEU A . n A 1 410 LEU 410 475 475 LEU LEU A . n A 1 411 ASP 411 476 476 ASP ASP A . n A 1 412 HIS 412 477 477 HIS HIS A . n A 1 413 PHE 413 478 478 PHE PHE A . n A 1 414 ALA 414 479 479 ALA ALA A . n A 1 415 ALA 415 480 480 ALA ALA A . n A 1 416 GLY 416 481 481 GLY GLY A . n A 1 417 THR 417 482 482 THR THR A . n A 1 418 SER 418 483 483 SER SER A . n A 1 419 ILE 419 484 484 ILE ILE A . n A 1 420 LEU 420 485 485 LEU LEU A . n A 1 421 PHE 421 486 486 PHE PHE A . n A 1 422 GLY 422 487 487 GLY GLY A . n A 1 423 VAL 423 488 488 VAL VAL A . n A 1 424 LEU 424 489 489 LEU LEU A . n A 1 425 ILE 425 490 490 ILE ILE A . n A 1 426 GLU 426 491 491 GLU GLU A . n A 1 427 ALA 427 492 492 ALA ALA A . n A 1 428 ILE 428 493 493 ILE ILE A . n A 1 429 GLY 429 494 494 GLY GLY A . n A 1 430 VAL 430 495 495 VAL VAL A . n A 1 431 ALA 431 496 496 ALA ALA A . n A 1 432 TRP 432 497 497 TRP TRP A . n A 1 433 PHE 433 498 498 PHE PHE A . n A 1 434 TYR 434 499 499 TYR TYR A . n A 1 435 GLY 435 500 500 GLY GLY A . n A 1 436 VAL 436 501 501 VAL VAL A . n A 1 437 GLY 437 502 502 GLY GLY A . n A 1 438 GLN 438 503 503 GLN GLN A . n A 1 439 PHE 439 504 504 PHE PHE A . n A 1 440 SER 440 505 505 SER SER A . n A 1 441 ASP 441 506 506 ASP ASP A . n A 1 442 ASP 442 507 507 ASP ASP A . n A 1 443 ILE 443 508 508 ILE ILE A . n A 1 444 GLN 444 509 509 GLN GLN A . n A 1 445 GLN 445 510 510 GLN GLN A . n A 1 446 MET 446 511 511 MET MET A . n A 1 447 THR 447 512 512 THR THR A . n A 1 448 GLY 448 513 513 GLY GLY A . n A 1 449 GLN 449 514 514 GLN GLN A . n A 1 450 ARG 450 515 515 ARG ARG A . n A 1 451 PRO 451 516 516 PRO PRO A . n A 1 452 SER 452 517 517 SER SER A . n A 1 453 LEU 453 518 518 LEU LEU A . n A 1 454 TYR 454 519 519 TYR TYR A . n A 1 455 TRP 455 520 520 TRP TRP A . n A 1 456 ARG 456 521 521 ARG ARG A . n A 1 457 LEU 457 522 522 LEU LEU A . n A 1 458 CYS 458 523 523 CYS CYS A . n A 1 459 TRP 459 524 524 TRP TRP A . n A 1 460 LYS 460 525 525 LYS LYS A . n A 1 461 LEU 461 526 526 LEU LEU A . n A 1 462 VAL 462 527 527 VAL VAL A . n A 1 463 SER 463 528 528 SER SER A . n A 1 464 PRO 464 529 529 PRO PRO A . n A 1 465 CYS 465 530 530 CYS CYS A . n A 1 466 PHE 466 531 531 PHE PHE A . n A 1 467 LEU 467 532 532 LEU LEU A . n A 1 468 LEU 468 533 533 LEU LEU A . n A 1 469 PHE 469 534 534 PHE PHE A . n A 1 470 VAL 470 535 535 VAL VAL A . n A 1 471 VAL 471 536 536 VAL VAL A . n A 1 472 VAL 472 537 537 VAL VAL A . n A 1 473 VAL 473 538 538 VAL VAL A . n A 1 474 SER 474 539 539 SER SER A . n A 1 475 ILE 475 540 540 ILE ILE A . n A 1 476 VAL 476 541 541 VAL VAL A . n A 1 477 THR 477 542 542 THR THR A . n A 1 478 PHE 478 543 543 PHE PHE A . n A 1 479 ARG 479 544 544 ARG ARG A . n A 1 480 PRO 480 545 545 PRO PRO A . n A 1 481 PRO 481 546 546 PRO PRO A . n A 1 482 HIS 482 547 547 HIS HIS A . n A 1 483 TYR 483 548 548 TYR TYR A . n A 1 484 GLY 484 549 549 GLY GLY A . n A 1 485 ALA 485 550 550 ALA ALA A . n A 1 486 TYR 486 551 551 TYR TYR A . n A 1 487 ILE 487 552 552 ILE ILE A . n A 1 488 PHE 488 553 553 PHE PHE A . n A 1 489 PRO 489 554 554 PRO PRO A . n A 1 490 ASP 490 555 555 ASP ASP A . n A 1 491 TRP 491 556 556 TRP TRP A . n A 1 492 ALA 492 557 557 ALA ALA A . n A 1 493 ASN 493 558 558 ASN ASN A . n A 1 494 ALA 494 559 559 ALA ALA A . n A 1 495 LEU 495 560 560 LEU LEU A . n A 1 496 GLY 496 561 561 GLY GLY A . n A 1 497 TRP 497 562 562 TRP TRP A . n A 1 498 VAL 498 563 563 VAL VAL A . n A 1 499 ILE 499 564 564 ILE ILE A . n A 1 500 ALA 500 565 565 ALA ALA A . n A 1 501 THR 501 566 566 THR THR A . n A 1 502 SER 502 567 567 SER SER A . n A 1 503 SER 503 568 568 SER SER A . n A 1 504 MET 504 569 569 MET MET A . n A 1 505 ALA 505 570 570 ALA ALA A . n A 1 506 MET 506 571 571 MET MET A . n A 1 507 VAL 507 572 572 VAL VAL A . n A 1 508 PRO 508 573 573 PRO PRO A . n A 1 509 ILE 509 574 574 ILE ILE A . n A 1 510 TYR 510 575 575 TYR TYR A . n A 1 511 ALA 511 576 576 ALA ALA A . n A 1 512 ALA 512 577 577 ALA ALA A . n A 1 513 TYR 513 578 578 TYR TYR A . n A 1 514 LYS 514 579 579 LYS LYS A . n A 1 515 PHE 515 580 580 PHE PHE A . n A 1 516 CYS 516 581 581 CYS CYS A . n A 1 517 SER 517 582 582 SER SER A . n A 1 518 LEU 518 583 583 LEU LEU A . n A 1 519 PRO 519 584 584 PRO PRO A . n A 1 520 GLY 520 585 585 GLY GLY A . n A 1 521 SER 521 586 586 SER SER A . n A 1 522 PHE 522 587 587 PHE PHE A . n A 1 523 ARG 523 588 588 ARG ARG A . n A 1 524 GLU 524 589 589 GLU GLU A . n A 1 525 LYS 525 590 590 LYS LYS A . n A 1 526 LEU 526 591 591 LEU LEU A . n A 1 527 ALA 527 592 592 ALA ALA A . n A 1 528 TYR 528 593 593 TYR TYR A . n A 1 529 ALA 529 594 594 ALA ALA A . n A 1 530 ILE 530 595 595 ILE ILE A . n A 1 531 ALA 531 596 596 ALA ALA A . n A 1 532 PRO 532 597 597 PRO PRO A . n A 1 533 GLU 533 598 598 GLU GLU A . n A 1 534 LYS 534 599 599 LYS LYS A . n A 1 535 ASP 535 600 600 ASP ASP A . n A 1 536 ARG 536 601 601 ARG ARG A . n A 1 537 GLU 537 602 602 GLU GLU A . n A 1 538 LEU 538 603 603 LEU LEU A . n A 1 539 VAL 539 604 604 VAL VAL A . n A 1 540 ASP 540 605 605 ASP ASP A . n A 1 541 ARG 541 606 606 ARG ARG A . n A 1 542 GLY 542 607 607 GLY GLY A . n A 1 543 GLU 543 608 608 GLU GLU A . n A 1 544 VAL 544 609 609 VAL VAL A . n A 1 545 ARG 545 610 610 ARG ARG A . n A 1 546 GLN 546 611 611 GLN GLN A . n A 1 547 PHE 547 612 612 PHE PHE A . n A 1 548 THR 548 613 613 THR THR A . n A 1 549 LEU 549 614 614 LEU LEU A . n A 1 550 ARG 550 615 615 ARG ARG A . n A 1 551 HIS 551 616 616 HIS HIS A . n A 1 552 TRP 552 617 617 TRP TRP A . n A 1 553 LEU 553 618 618 LEU LEU A . n A 1 554 LYS 554 619 619 LYS LYS A . n A 1 555 VAL 555 620 620 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 701 621 NAG NAG A . C 2 NAG 1 702 622 NAG NAG A . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8Y2C _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8Y2C _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8Y2C _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8Y2C _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 4337 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.488 ? 5921 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 7.203 ? 581 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.038 ? 677 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 723 ? f_plane_restr ? ? # _struct.entry_id 8Y2C _struct.title 'Cryo-EM structure of human dopamine transporter in apo state' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8Y2C _struct_keywords.text 'human dopamine transporter in apo state, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SC6A3_HUMAN _struct_ref.pdbx_db_accession Q01959 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELALGQFNREGAAGVWKICPILKGVGFTV ILISLYVGFFYNVIIAWALHYLFSSFTTELPWIHCNNSWNSPNCSDAHPGDSSGDSSGLNDTFGTTPAAEYFERGVLHLH QSHGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAIDGIRAYLSVDFYRL CEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIVTTSINSLTSFSSGFVVFSFLGYMAQKHSVPIGDVAKD GPGLIFIIYPEAIATLPLSSAWAVVFFIMLLTLGIDSAMGGMESVITGLIDEFQLLHRHRELFTLFIVLATFLLSLFCVT NGGIYVFTLLDHFAAGTSILFGVLIEAIGVAWFYGVGQFSDDIQQMTGQRPSLYWRLCWKLVSPCFLLFVVVVSIVTFRP PHYGAYIFPDWANALGWVIATSSMAMVPIYAAYKFCSLPGSFREKLAYAIAPEKDRELVDRGEVRQFTLRHWLKV ; _struct_ref.pdbx_align_begin 0 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8Y2C _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 555 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q01959 _struct_ref_seq.db_align_beg 66 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 620 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 66 _struct_ref_seq.pdbx_auth_seq_align_end 620 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 1 ? VAL A 13 ? LYS A 66 VAL A 78 1 ? 13 HELX_P HELX_P2 AA2 ASP A 14 ? TRP A 19 ? ASP A 79 TRP A 84 1 ? 6 HELX_P HELX_P3 AA3 TRP A 19 ? ASN A 28 ? TRP A 84 ASN A 93 1 ? 10 HELX_P HELX_P4 AA4 PHE A 33 ? GLY A 45 ? PHE A 98 GLY A 110 1 ? 13 HELX_P HELX_P5 AA5 GLY A 45 ? ARG A 60 ? GLY A 110 ARG A 125 1 ? 16 HELX_P HELX_P6 AA6 GLY A 75 ? SER A 105 ? GLY A 140 SER A 170 1 ? 31 HELX_P HELX_P7 AA7 THR A 146 ? GLY A 155 ? THR A 211 GLY A 220 1 ? 10 HELX_P HELX_P8 AA8 HIS A 158 ? SER A 162 ? HIS A 223 SER A 227 5 ? 5 HELX_P HELX_P9 AA9 ARG A 172 ? TRP A 191 ? ARG A 237 TRP A 256 1 ? 20 HELX_P HELX_P10 AB1 TRP A 202 ? LEU A 222 ? TRP A 267 LEU A 287 1 ? 21 HELX_P HELX_P11 AB2 ALA A 225 ? ALA A 231 ? ALA A 290 ALA A 296 1 ? 7 HELX_P HELX_P12 AB3 ASP A 236 ? CYS A 241 ? ASP A 301 CYS A 306 1 ? 6 HELX_P HELX_P13 AB4 ALA A 243 ? GLY A 258 ? ALA A 308 GLY A 323 1 ? 16 HELX_P HELX_P14 AB5 GLY A 262 ? SER A 269 ? GLY A 327 SER A 334 1 ? 8 HELX_P HELX_P15 AB6 CYS A 277 ? SER A 311 ? CYS A 342 SER A 376 1 ? 35 HELX_P HELX_P16 AB7 LEU A 324 ? THR A 335 ? LEU A 389 THR A 400 1 ? 12 HELX_P HELX_P17 AB8 LEU A 338 ? PHE A 373 ? LEU A 403 PHE A 438 1 ? 36 HELX_P HELX_P18 AB9 HIS A 379 ? LEU A 396 ? HIS A 444 LEU A 461 1 ? 18 HELX_P HELX_P19 AC1 PHE A 397 ? THR A 400 ? PHE A 462 THR A 465 5 ? 4 HELX_P HELX_P20 AC2 GLY A 402 ? ALA A 414 ? GLY A 467 ALA A 479 1 ? 13 HELX_P HELX_P21 AC3 THR A 417 ? PHE A 433 ? THR A 482 PHE A 498 1 ? 17 HELX_P HELX_P22 AC4 GLY A 435 ? THR A 447 ? GLY A 500 THR A 512 1 ? 13 HELX_P HELX_P23 AC5 SER A 452 ? LEU A 461 ? SER A 517 LEU A 526 1 ? 10 HELX_P HELX_P24 AC6 LEU A 461 ? THR A 477 ? LEU A 526 THR A 542 1 ? 17 HELX_P HELX_P25 AC7 PRO A 489 ? ALA A 505 ? PRO A 554 ALA A 570 1 ? 17 HELX_P HELX_P26 AC8 MET A 506 ? LEU A 518 ? MET A 571 LEU A 583 1 ? 13 HELX_P HELX_P27 AC9 SER A 521 ? ALA A 531 ? SER A 586 ALA A 596 1 ? 11 HELX_P HELX_P28 AD1 PRO A 532 ? LYS A 534 ? PRO A 597 LYS A 599 5 ? 3 HELX_P HELX_P29 AD2 ASP A 535 ? ASP A 540 ? ASP A 600 ASP A 605 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 115 SG ? ? ? 1_555 A CYS 124 SG ? ? A CYS 180 A CYS 189 1_555 ? ? ? ? ? ? ? 2.030 ? ? covale1 covale one ? A ASN 116 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 181 A NAG 701 1_555 ? ? ? ? ? ? ? 1.439 ? N-Glycosylation covale2 covale one ? A ASN 123 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 188 A NAG 702 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 HIS A 482 ? TYR A 483 ? HIS A 547 TYR A 548 AA1 2 TYR A 486 ? ILE A 487 ? TYR A 551 ILE A 552 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id TYR _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 483 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id TYR _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 548 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id TYR _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 486 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id TYR _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 551 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OH A TYR 593 ? ? OD1 A ASP 605 ? ? 2.16 2 1 OD1 A ASN 82 ? ? OG A SER 357 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 132 ? ? -92.36 51.46 2 1 CYS A 135 ? ? -150.94 86.63 3 1 TRP A 177 ? ? -91.82 49.93 4 1 PRO A 187 ? ? -69.76 7.04 5 1 LEU A 298 ? ? -95.25 57.75 6 1 LEU A 441 ? ? -93.23 58.27 7 1 ARG A 544 ? ? 33.48 67.19 8 1 ALA A 570 ? ? -98.67 35.44 9 1 ASP A 600 ? ? -99.24 34.60 10 1 ARG A 606 ? ? -85.13 49.68 11 1 PHE A 612 ? ? -90.89 50.63 12 1 LEU A 618 ? ? -92.37 58.99 # _pdbx_entry_details.entry_id 8Y2C _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8Y2C _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8Y2C _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.16 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 55436 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'human dopamine transporter in apo state' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8Y2C _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_defocus_max 2200 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8Y2C _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8Y2C _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 192 ? A ALA 127 2 1 Y 1 A HIS 193 ? A HIS 128 3 1 Y 1 A PRO 194 ? A PRO 129 4 1 Y 1 A GLY 195 ? A GLY 130 5 1 Y 1 A ASP 196 ? A ASP 131 6 1 Y 1 A SER 197 ? A SER 132 7 1 Y 1 A SER 198 ? A SER 133 8 1 Y 1 A GLY 199 ? A GLY 134 9 1 Y 1 A ASP 200 ? A ASP 135 10 1 Y 1 A SER 201 ? A SER 136 11 1 Y 1 A SER 202 ? A SER 137 12 1 Y 1 A GLY 203 ? A GLY 138 13 1 Y 1 A LEU 204 ? A LEU 139 14 1 Y 1 A ASN 205 ? A ASN 140 15 1 Y 1 A ASP 206 ? A ASP 141 16 1 Y 1 A THR 207 ? A THR 142 17 1 Y 1 A PHE 208 ? A PHE 143 18 1 Y 1 A LYS 257 ? A LYS 192 19 1 Y 1 A GLY 258 ? A GLY 193 20 1 Y 1 A VAL 259 ? A VAL 194 21 1 Y 1 A LYS 260 ? A LYS 195 22 1 Y 1 A THR 261 ? A THR 196 23 1 Y 1 A SER 262 ? A SER 197 24 1 Y 1 A GLY 263 ? A GLY 198 25 1 Y 1 A LYS 264 ? A LYS 199 26 1 Y 1 A VAL 265 ? A VAL 200 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.current_status REL _em_admin.deposition_date 2024-01-25 _em_admin.deposition_site PDBJ _em_admin.entry_id 8Y2C _em_admin.last_update 2024-08-21 _em_admin.map_release_date 2024-08-14 _em_admin.title 'Cryo-EM structure of human dopamine transporter in apo state' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING ONLY' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Chinese Academy of Sciences' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NAG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NAG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _atom_sites.entry_id 8Y2C _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_