HEADER VIRUS 29-JAN-24 8Y3G TITLE CRYO-EM STRUCTURE OF DENGUE VIRUS SEROTYPE 2 STRAIN D2Y98P-PP1 N153Q TITLE 2 MUTANT AT 4 DEG C COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENVELOPE PROTEIN; COMPND 3 CHAIN: A, C, E; COMPND 4 SYNONYM: GENOME POLYPROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: MEMBRANE POLYPROTEIN; COMPND 9 CHAIN: B, D, F; COMPND 10 SYNONYM: GENOME POLYPROTEIN; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DENGUE VIRUS TYPE 2; SOURCE 3 ORGANISM_TAXID: 11060; SOURCE 4 STRAIN: D2Y98P; SOURCE 5 GENE: E; SOURCE 6 EXPRESSION_SYSTEM: AEDES ALBOPICTUS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: ASIAN TIGER MOSQUITO; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7160; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: DENGUE VIRUS TYPE 2; SOURCE 11 ORGANISM_TAXID: 11060; SOURCE 12 STRAIN: D2Y98P; SOURCE 13 EXPRESSION_SYSTEM: AEDES ALBOPICTUS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: ASIAN TIGER MOSQUITO; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 7160 KEYWDS DENGUE VIRUS, HUMAN ANTIBODY, DENGUE-ANTIBODY STRUCTURE, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR G.FIBRIANSAH,T.S.NG,X.N.LIM,A.W.K.TAN,J.SHI,S.M.LOK REVDAT 1 29-JAN-25 8Y3G 0 JRNL AUTH G.FIBRIANSAH,T.S.NG,X.N.LIM,A.W.K.TAN,J.SHI,J.E.CROWE, JRNL AUTH 2 S.M.LOK JRNL TITL ROLE OF N-GLYCOSYLATION AT ASPARAGINE 153 OF DENGUE ENVELOPE JRNL TITL 2 PROTEIN IN IMMUNE RESPONSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SERIALEM, COOT, PHENIX, RELION, RELION, REMARK 3 RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 4UIF REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.700 REMARK 3 NUMBER OF PARTICLES : 173676 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8Y3G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1300043023. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : DENGUE VIRUS TYPE 2 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : DENGUE VIRUS SEROTYPE 2 STRAIN REMARK 245 Y98P-PP1 N153Q MUTANT REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 400.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 5100.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 2500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.361803 0.587785 -0.723607 0.00000 REMARK 350 BIOMT2 2 -0.262866 0.809017 0.525731 0.00000 REMARK 350 BIOMT3 2 0.894427 0.000000 0.447214 0.00000 REMARK 350 BIOMT1 3 -0.670820 0.688191 -0.276393 0.00000 REMARK 350 BIOMT2 3 0.162460 0.500000 0.850651 0.00000 REMARK 350 BIOMT3 3 0.723607 0.525731 -0.447214 0.00000 REMARK 350 BIOMT1 4 -0.670820 0.162460 0.723607 0.00000 REMARK 350 BIOMT2 4 0.688191 0.500000 0.525731 0.00000 REMARK 350 BIOMT3 4 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 5 0.361803 -0.262866 0.894427 0.00000 REMARK 350 BIOMT2 5 0.587785 0.809017 0.000000 0.00000 REMARK 350 BIOMT3 5 -0.723607 0.525731 0.447214 0.00000 REMARK 350 BIOMT1 6 -0.052787 0.688191 0.723607 0.00000 REMARK 350 BIOMT2 6 0.688191 -0.500000 0.525731 0.00000 REMARK 350 BIOMT3 6 0.723607 0.525731 -0.447213 0.00000 REMARK 350 BIOMT1 7 0.447214 0.525731 0.723607 0.00000 REMARK 350 BIOMT2 7 0.850651 0.000000 -0.525731 0.00000 REMARK 350 BIOMT3 7 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 8 0.670820 0.688191 0.276393 0.00000 REMARK 350 BIOMT2 8 -0.162460 0.500000 -0.850651 0.00000 REMARK 350 BIOMT3 8 -0.723607 0.525731 0.447214 0.00000 REMARK 350 BIOMT1 9 0.309017 0.951057 0.000000 0.00000 REMARK 350 BIOMT2 9 -0.951057 0.309017 0.000000 0.00000 REMARK 350 BIOMT3 9 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 10 -0.138197 0.951057 0.276393 0.00000 REMARK 350 BIOMT2 10 -0.425326 -0.309017 0.850651 0.00000 REMARK 350 BIOMT3 10 0.894427 0.000000 0.447214 0.00000 REMARK 350 BIOMT1 11 -0.309017 -0.951057 0.000000 0.00000 REMARK 350 BIOMT2 11 -0.951057 0.309017 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 12 0.138197 -0.951057 -0.276393 0.00000 REMARK 350 BIOMT2 12 -0.425326 -0.309017 0.850651 0.00000 REMARK 350 BIOMT3 12 -0.894427 0.000000 -0.447214 0.00000 REMARK 350 BIOMT1 13 0.052787 -0.688191 -0.723607 0.00000 REMARK 350 BIOMT2 13 0.688191 -0.500000 0.525731 0.00000 REMARK 350 BIOMT3 13 -0.723607 -0.525731 0.447213 0.00000 REMARK 350 BIOMT1 14 -0.447214 -0.525731 -0.723607 0.00000 REMARK 350 BIOMT2 14 0.850651 0.000000 -0.525731 0.00000 REMARK 350 BIOMT3 14 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 15 -0.670820 -0.688191 -0.276393 0.00000 REMARK 350 BIOMT2 15 -0.162460 0.500000 -0.850651 0.00000 REMARK 350 BIOMT3 15 0.723607 -0.525731 -0.447214 0.00000 REMARK 350 BIOMT1 16 -0.638196 0.262866 -0.723607 0.00000 REMARK 350 BIOMT2 16 0.262866 -0.809017 -0.525731 0.00000 REMARK 350 BIOMT3 16 -0.723607 -0.525731 0.447213 0.00000 REMARK 350 BIOMT1 17 -0.947214 -0.162460 0.276393 0.00000 REMARK 350 BIOMT2 17 -0.162460 -0.500000 -0.850651 0.00000 REMARK 350 BIOMT3 17 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 18 -0.052787 -0.688191 0.723607 0.00000 REMARK 350 BIOMT2 18 -0.688191 -0.500000 -0.525731 0.00000 REMARK 350 BIOMT3 18 0.723607 -0.525731 -0.447213 0.00000 REMARK 350 BIOMT1 19 0.809017 -0.587785 0.000000 0.00000 REMARK 350 BIOMT2 19 -0.587785 -0.809017 0.000000 0.00000 REMARK 350 BIOMT3 19 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 20 0.447214 0.000000 -0.894427 0.00000 REMARK 350 BIOMT2 20 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 20 -0.894427 0.000000 -0.447214 0.00000 REMARK 350 BIOMT1 21 -0.447214 0.525731 -0.723607 0.00000 REMARK 350 BIOMT2 21 -0.850651 0.000000 0.525731 0.00000 REMARK 350 BIOMT3 21 0.276393 0.850651 0.447214 0.00000 REMARK 350 BIOMT1 22 -0.947214 0.162460 0.276393 0.00000 REMARK 350 BIOMT2 22 0.162460 -0.500000 0.850651 0.00000 REMARK 350 BIOMT3 22 0.276393 0.850651 0.447214 0.00000 REMARK 350 BIOMT1 23 -0.138197 -0.425326 0.894427 0.00000 REMARK 350 BIOMT2 23 0.951057 -0.309017 0.000000 0.00000 REMARK 350 BIOMT3 23 0.276393 0.850651 0.447214 0.00000 REMARK 350 BIOMT1 24 0.861803 -0.425326 0.276393 0.00000 REMARK 350 BIOMT2 24 0.425326 0.309017 -0.850651 0.00000 REMARK 350 BIOMT3 24 0.276393 0.850651 0.447214 0.00000 REMARK 350 BIOMT1 25 0.670820 0.162460 -0.723607 0.00000 REMARK 350 BIOMT2 25 -0.688191 0.500000 -0.525731 0.00000 REMARK 350 BIOMT3 25 0.276393 0.850651 0.447214 0.00000 REMARK 350 BIOMT1 26 -0.138197 -0.951057 0.276393 0.00000 REMARK 350 BIOMT2 26 0.425326 -0.309017 -0.850651 0.00000 REMARK 350 BIOMT3 26 0.894427 0.000000 0.447214 0.00000 REMARK 350 BIOMT1 27 0.447214 -0.850651 -0.276393 0.00000 REMARK 350 BIOMT2 27 -0.525731 0.000000 -0.850651 0.00000 REMARK 350 BIOMT3 27 0.723607 0.525731 -0.447214 0.00000 REMARK 350 BIOMT1 28 0.138197 -0.425326 -0.894427 0.00000 REMARK 350 BIOMT2 28 -0.951057 -0.309017 0.000000 0.00000 REMARK 350 BIOMT3 28 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 29 -0.638196 -0.262866 -0.723607 0.00000 REMARK 350 BIOMT2 29 -0.262866 -0.809017 0.525731 0.00000 REMARK 350 BIOMT3 29 -0.723607 0.525731 0.447213 0.00000 REMARK 350 BIOMT1 30 -0.809017 -0.587785 0.000000 0.00000 REMARK 350 BIOMT2 30 0.587785 -0.809017 0.000000 0.00000 REMARK 350 BIOMT3 30 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 31 -0.361803 0.587785 0.723607 0.00000 REMARK 350 BIOMT2 31 0.262866 0.809017 -0.525731 0.00000 REMARK 350 BIOMT3 31 -0.894427 0.000000 -0.447214 0.00000 REMARK 350 BIOMT1 32 0.361803 0.262866 0.894427 0.00000 REMARK 350 BIOMT2 32 -0.587785 0.809017 0.000000 0.00000 REMARK 350 BIOMT3 32 -0.723607 -0.525731 0.447214 0.00000 REMARK 350 BIOMT1 33 0.861803 0.425326 0.276393 0.00000 REMARK 350 BIOMT2 33 -0.425326 0.309017 0.850651 0.00000 REMARK 350 BIOMT3 33 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 34 0.447214 0.850651 -0.276393 0.00000 REMARK 350 BIOMT2 34 0.525731 0.000000 0.850651 0.00000 REMARK 350 BIOMT3 34 0.723607 -0.525731 -0.447214 0.00000 REMARK 350 BIOMT1 35 -0.309017 0.951057 0.000000 0.00000 REMARK 350 BIOMT2 35 0.951057 0.309017 0.000000 0.00000 REMARK 350 BIOMT3 35 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 36 0.947214 -0.162460 -0.276393 0.00000 REMARK 350 BIOMT2 36 0.162460 -0.500000 0.850651 0.00000 REMARK 350 BIOMT3 36 -0.276393 -0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 37 0.138197 0.425326 -0.894427 0.00000 REMARK 350 BIOMT2 37 0.951057 -0.309017 0.000000 0.00000 REMARK 350 BIOMT3 37 -0.276393 -0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 38 -0.861803 0.425326 -0.276393 0.00000 REMARK 350 BIOMT2 38 0.425326 0.309017 -0.850651 0.00000 REMARK 350 BIOMT3 38 -0.276393 -0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 39 -0.670820 -0.162460 0.723607 0.00000 REMARK 350 BIOMT2 39 -0.688191 0.500000 -0.525731 0.00000 REMARK 350 BIOMT3 39 -0.276393 -0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 40 0.447214 -0.525731 0.723607 0.00000 REMARK 350 BIOMT2 40 -0.850651 0.000000 0.525731 0.00000 REMARK 350 BIOMT3 40 -0.276393 -0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 41 -0.447214 -0.850651 0.276393 0.00000 REMARK 350 BIOMT2 41 0.525731 0.000000 0.850651 0.00000 REMARK 350 BIOMT3 41 -0.723607 0.525731 0.447214 0.00000 REMARK 350 BIOMT1 42 0.309017 -0.951057 0.000000 0.00000 REMARK 350 BIOMT2 42 0.951057 0.309017 0.000000 0.00000 REMARK 350 BIOMT3 42 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 43 0.361803 -0.587785 -0.723607 0.00000 REMARK 350 BIOMT2 43 0.262866 0.809017 -0.525731 0.00000 REMARK 350 BIOMT3 43 0.894427 0.000000 0.447214 0.00000 REMARK 350 BIOMT1 44 -0.361803 -0.262866 -0.894427 0.00000 REMARK 350 BIOMT2 44 -0.587785 0.809017 0.000000 0.00000 REMARK 350 BIOMT3 44 0.723607 0.525731 -0.447214 0.00000 REMARK 350 BIOMT1 45 -0.861803 -0.425326 -0.276393 0.00000 REMARK 350 BIOMT2 45 -0.425326 0.309017 0.850651 0.00000 REMARK 350 BIOMT3 45 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 46 -0.361803 0.262866 -0.894427 0.00000 REMARK 350 BIOMT2 46 0.587785 0.809017 0.000000 0.00000 REMARK 350 BIOMT3 46 0.723607 -0.525731 -0.447214 0.00000 REMARK 350 BIOMT1 47 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 47 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 47 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 48 -0.361803 -0.587785 0.723607 0.00000 REMARK 350 BIOMT2 48 -0.262866 0.809017 0.525731 0.00000 REMARK 350 BIOMT3 48 -0.894427 0.000000 -0.447214 0.00000 REMARK 350 BIOMT1 49 0.670820 -0.688191 0.276393 0.00000 REMARK 350 BIOMT2 49 0.162460 0.500000 0.850651 0.00000 REMARK 350 BIOMT3 49 -0.723607 -0.525731 0.447214 0.00000 REMARK 350 BIOMT1 50 0.670820 -0.162460 -0.723607 0.00000 REMARK 350 BIOMT2 50 0.688191 0.500000 0.525731 0.00000 REMARK 350 BIOMT3 50 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 51 0.947214 0.162460 -0.276393 0.00000 REMARK 350 BIOMT2 51 -0.162460 -0.500000 -0.850651 0.00000 REMARK 350 BIOMT3 51 -0.276393 0.850651 -0.447214 0.00000 REMARK 350 BIOMT1 52 0.052787 0.688191 -0.723607 0.00000 REMARK 350 BIOMT2 52 -0.688191 -0.500000 -0.525731 0.00000 REMARK 350 BIOMT3 52 -0.723607 0.525731 0.447213 0.00000 REMARK 350 BIOMT1 53 -0.809017 0.587785 0.000000 0.00000 REMARK 350 BIOMT2 53 -0.587785 -0.809017 0.000000 0.00000 REMARK 350 BIOMT3 53 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 54 -0.447214 0.000000 0.894427 0.00000 REMARK 350 BIOMT2 54 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 54 0.894427 0.000000 0.447214 0.00000 REMARK 350 BIOMT1 55 0.638196 -0.262866 0.723607 0.00000 REMARK 350 BIOMT2 55 0.262866 -0.809017 -0.525731 0.00000 REMARK 350 BIOMT3 55 0.723607 0.525731 -0.447213 0.00000 REMARK 350 BIOMT1 56 -0.138197 0.425326 0.894427 0.00000 REMARK 350 BIOMT2 56 -0.951057 -0.309017 0.000000 0.00000 REMARK 350 BIOMT3 56 0.276393 -0.850651 0.447214 0.00000 REMARK 350 BIOMT1 57 0.638196 0.262866 0.723607 0.00000 REMARK 350 BIOMT2 57 -0.262866 -0.809017 0.525731 0.00000 REMARK 350 BIOMT3 57 0.723607 -0.525731 -0.447213 0.00000 REMARK 350 BIOMT1 58 0.809017 0.587785 0.000000 0.00000 REMARK 350 BIOMT2 58 0.587785 -0.809017 0.000000 0.00000 REMARK 350 BIOMT3 58 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 59 0.138197 0.951057 -0.276393 0.00000 REMARK 350 BIOMT2 59 0.425326 -0.309017 -0.850651 0.00000 REMARK 350 BIOMT3 59 -0.894427 0.000000 -0.447214 0.00000 REMARK 350 BIOMT1 60 -0.447214 0.850651 0.276393 0.00000 REMARK 350 BIOMT2 60 -0.525731 0.000000 -0.850651 0.00000 REMARK 350 BIOMT3 60 -0.723607 -0.525731 0.447214 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR E 32 OD1 ASP E 42 1.99 REMARK 500 O SER A 472 OG SER A 476 2.00 REMARK 500 OG1 THR A 32 OD1 ASP A 42 2.01 REMARK 500 OG1 THR C 32 OD1 ASP C 42 2.05 REMARK 500 OG SER E 169 O CYS E 185 2.08 REMARK 500 OE2 GLU A 172 OG1 THR A 182 2.14 REMARK 500 NH2 ARG A 210 O THR C 76 2.14 REMARK 500 O LYS E 88 NZ LYS E 234 2.16 REMARK 500 NH2 ARG A 350 OE1 GLU A 370 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 7 -8.96 75.77 REMARK 500 THR A 76 13.03 57.13 REMARK 500 SER A 145 -3.18 68.01 REMARK 500 PRO A 187 40.29 -83.84 REMARK 500 MET A 201 -62.37 -108.74 REMARK 500 GLU A 202 111.88 -163.71 REMARK 500 ASN A 203 18.17 54.72 REMARK 500 THR A 226 -7.11 77.77 REMARK 500 ASN A 276 59.20 36.70 REMARK 500 PHE A 279 52.76 -94.83 REMARK 500 SER A 300 -71.10 -83.06 REMARK 500 MET A 301 163.71 178.91 REMARK 500 LYS A 361 -7.79 76.44 REMARK 500 ASN A 469 51.66 -92.93 REMARK 500 HIS B 7 38.34 -98.16 REMARK 500 THR B 55 -1.54 77.88 REMARK 500 THR B 56 136.55 -172.19 REMARK 500 THR C 76 -1.45 71.04 REMARK 500 SER C 145 -1.66 62.67 REMARK 500 HIS C 158 -4.71 74.60 REMARK 500 ASN C 194 -4.04 75.41 REMARK 500 ASN C 276 61.12 60.88 REMARK 500 ASN C 469 30.91 -97.13 REMARK 500 HIS D 7 40.27 -103.97 REMARK 500 THR D 14 -168.76 -126.37 REMARK 500 ASN E 8 32.08 -97.17 REMARK 500 SER E 19 33.81 70.29 REMARK 500 ARG E 73 -74.49 -96.31 REMARK 500 CYS E 74 159.49 176.97 REMARK 500 THR E 76 -4.56 73.23 REMARK 500 ASP E 192 62.98 62.94 REMARK 500 ASN E 194 -8.26 77.52 REMARK 500 HIS E 244 -138.32 60.92 REMARK 500 MET E 272 18.79 -140.85 REMARK 500 SER E 274 63.40 -103.38 REMARK 500 PHE E 279 51.78 -93.15 REMARK 500 LYS E 291 49.87 -92.88 REMARK 500 SER E 298 50.38 -92.82 REMARK 500 GLN E 316 43.41 -88.57 REMARK 500 ASP E 417 -7.49 74.02 REMARK 500 PRO F 6 53.17 -92.26 REMARK 500 VAL F 8 -62.42 -97.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-38882 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF DENGUE VIRUS SEROTYPE 2 STRAIN D2Y98P-PP1 REMARK 900 N153Q MUTANT IN COMPLEX WITH HUMAN ANTIBODY 2D22 FAB AT 37 DEG C REMARK 900 RELATED ID: EMD-38883 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF DENGUE VIRUS SEROTYPE 2 STRAIN D2Y98P-PP1 REMARK 900 N153Q MUTANT IN COMPLEX WITH HUMAN ANTIBODY C10 FAB AT 37 DEG C REMARK 900 RELATED ID: EMD-38884 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF DENGUE VIRUS SEROTYPE 2 STRAIN D2Y98P-PP1 AT 4 REMARK 900 DEG C REMARK 900 RELATED ID: EMD-38885 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF DENGUE VIRUS SEROTYPE 2 STRAIN D2Y98P-PP1 IN REMARK 900 COMPLEX WITH HUMAN ANTIBODY 2D22 FAB AT 37 DEG C REMARK 900 RELATED ID: EMD-38886 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF DENGUE VIRUS SEROTYPE 2 STRAIN D2Y98P-PP1 IN REMARK 900 COMPLEX WITH HUMAN ANTIBODY C10 FAB AT 37 DEG C REMARK 900 RELATED ID: EMD-38881 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF DENGUE VIRUS SEROTYPE 2 STRAIN D2Y98P-PP1 REMARK 900 N153Q MUTANT AT 4 DEG C DBREF1 8Y3G A 1 495 UNP A0A678XB23_9FLAV DBREF2 8Y3G A A0A678XB23 1 495 DBREF 8Y3G B 1 75 UNP A4GVG9 A4GVG9_9FLAV 206 280 DBREF1 8Y3G C 1 495 UNP A0A678XB23_9FLAV DBREF2 8Y3G C A0A678XB23 1 495 DBREF 8Y3G D 1 75 UNP A4GVG9 A4GVG9_9FLAV 206 280 DBREF1 8Y3G E 1 495 UNP A0A678XB23_9FLAV DBREF2 8Y3G E A0A678XB23 1 495 DBREF 8Y3G F 1 75 UNP A4GVG9 A4GVG9_9FLAV 206 280 SEQADV 8Y3G GLN A 153 UNP A0A678XB2 ASN 153 ENGINEERED MUTATION SEQADV 8Y3G GLN C 153 UNP A0A678XB2 ASN 153 ENGINEERED MUTATION SEQADV 8Y3G GLN E 153 UNP A0A678XB2 ASN 153 ENGINEERED MUTATION SEQRES 1 A 495 MET ARG CYS ILE GLY ILE SER ASN ARG ASP PHE VAL GLU SEQRES 2 A 495 GLY VAL SER GLY GLY SER TRP VAL ASP ILE VAL LEU GLU SEQRES 3 A 495 HIS GLY SER CYS VAL THR THR MET ALA LYS ASN LYS PRO SEQRES 4 A 495 THR LEU ASP PHE GLU LEU ILE LYS THR GLU ALA LYS HIS SEQRES 5 A 495 PRO ALA THR LEU ARG LYS TYR CYS ILE GLU ALA LYS LEU SEQRES 6 A 495 THR ASN THR THR THR ALA SER ARG CYS PRO THR GLN GLY SEQRES 7 A 495 GLU PRO SER LEU ASN GLU GLU GLN ASP LYS ARG PHE VAL SEQRES 8 A 495 CYS LYS HIS SER MET VAL ASP ARG GLY TRP GLY ASN GLY SEQRES 9 A 495 CYS GLY LEU PHE GLY LYS GLY GLY ILE VAL THR CYS ALA SEQRES 10 A 495 MET PHE THR CYS LYS LYS ASN MET GLU GLY LYS ILE VAL SEQRES 11 A 495 GLN PRO GLU ASN LEU GLU TYR THR ILE VAL ILE THR PRO SEQRES 12 A 495 HIS SER GLY GLU GLU ASN ALA VAL GLY GLN ASP THR GLY SEQRES 13 A 495 LYS HIS GLY LYS GLU ILE LYS VAL THR PRO GLN SER SER SEQRES 14 A 495 ILE THR GLU ALA GLU LEU THR GLY TYR GLY THR VAL THR SEQRES 15 A 495 MET GLU CYS SER PRO ARG THR GLY LEU ASP PHE ASN GLU SEQRES 16 A 495 MET VAL LEU LEU GLN MET GLU ASN LYS ALA TRP LEU VAL SEQRES 17 A 495 HIS ARG GLN TRP PHE LEU ASP LEU PRO LEU PRO TRP LEU SEQRES 18 A 495 PRO GLY ALA ASP THR GLN GLY SER ASN TRP ILE GLN LYS SEQRES 19 A 495 GLU THR LEU VAL THR PHE LYS ASN PRO HIS ALA LYS LYS SEQRES 20 A 495 GLN ASP VAL VAL VAL LEU GLY SER GLN GLU GLY ALA MET SEQRES 21 A 495 HIS THR ALA LEU THR GLY ALA THR GLU ILE GLN MET SER SEQRES 22 A 495 SER GLY ASN LEU LEU PHE THR GLY HIS LEU LYS CYS ARG SEQRES 23 A 495 LEU ARG MET ASP LYS LEU GLN LEU LYS GLY MET SER TYR SEQRES 24 A 495 SER MET CYS THR GLY LYS PHE LYS VAL VAL LYS GLU ILE SEQRES 25 A 495 ALA GLU THR GLN HIS GLY THR ILE VAL ILE ARG VAL GLN SEQRES 26 A 495 TYR GLU GLY ASP GLY SER PRO CYS LYS ILE PRO PHE GLU SEQRES 27 A 495 ILE MET ASP LEU GLU LYS ARG HIS VAL LEU GLY ARG LEU SEQRES 28 A 495 ILE THR VAL ASN PRO ILE VAL THR GLU LYS ASP SER PRO SEQRES 29 A 495 VAL ASN ILE GLU ALA GLU PRO PRO PHE GLY ASP SER TYR SEQRES 30 A 495 ILE ILE ILE GLY VAL GLU PRO GLY GLN LEU LYS LEU SER SEQRES 31 A 495 TRP PHE LYS LYS GLY SER SER ILE GLY GLN MET PHE GLU SEQRES 32 A 495 THR THR MET ARG GLY ALA LYS ARG MET ALA ILE LEU GLY SEQRES 33 A 495 ASP THR ALA TRP ASP PHE GLY SER LEU GLY GLY VAL PHE SEQRES 34 A 495 THR SER ILE GLY LYS ALA LEU HIS GLN VAL PHE GLY ALA SEQRES 35 A 495 ILE TYR GLY ALA ALA PHE SER GLY VAL SER TRP THR MET SEQRES 36 A 495 LYS ILE LEU ILE GLY VAL VAL ILE THR TRP ILE GLY MET SEQRES 37 A 495 ASN SER ARG SER THR SER LEU SER VAL SER LEU VAL LEU SEQRES 38 A 495 VAL GLY VAL VAL THR LEU TYR LEU GLY VAL MET VAL GLN SEQRES 39 A 495 ALA SEQRES 1 B 75 SER VAL ALA LEU VAL PRO HIS VAL GLY MET GLY LEU GLU SEQRES 2 B 75 THR ARG THR GLU THR TRP MET SER SER GLU GLY ALA TRP SEQRES 3 B 75 LYS HIS ALA GLN ARG ILE GLU THR TRP VAL LEU ARG HIS SEQRES 4 B 75 PRO GLY PHE THR ILE MET ALA ALA ILE LEU ALA TYR THR SEQRES 5 B 75 ILE GLY THR THR TYR PHE GLN ARG VAL LEU ILE PHE ILE SEQRES 6 B 75 LEU LEU THR ALA VAL ALA PRO SER MET THR SEQRES 1 C 495 MET ARG CYS ILE GLY ILE SER ASN ARG ASP PHE VAL GLU SEQRES 2 C 495 GLY VAL SER GLY GLY SER TRP VAL ASP ILE VAL LEU GLU SEQRES 3 C 495 HIS GLY SER CYS VAL THR THR MET ALA LYS ASN LYS PRO SEQRES 4 C 495 THR LEU ASP PHE GLU LEU ILE LYS THR GLU ALA LYS HIS SEQRES 5 C 495 PRO ALA THR LEU ARG LYS TYR CYS ILE GLU ALA LYS LEU SEQRES 6 C 495 THR ASN THR THR THR ALA SER ARG CYS PRO THR GLN GLY SEQRES 7 C 495 GLU PRO SER LEU ASN GLU GLU GLN ASP LYS ARG PHE VAL SEQRES 8 C 495 CYS LYS HIS SER MET VAL ASP ARG GLY TRP GLY ASN GLY SEQRES 9 C 495 CYS GLY LEU PHE GLY LYS GLY GLY ILE VAL THR CYS ALA SEQRES 10 C 495 MET PHE THR CYS LYS LYS ASN MET GLU GLY LYS ILE VAL SEQRES 11 C 495 GLN PRO GLU ASN LEU GLU TYR THR ILE VAL ILE THR PRO SEQRES 12 C 495 HIS SER GLY GLU GLU ASN ALA VAL GLY GLN ASP THR GLY SEQRES 13 C 495 LYS HIS GLY LYS GLU ILE LYS VAL THR PRO GLN SER SER SEQRES 14 C 495 ILE THR GLU ALA GLU LEU THR GLY TYR GLY THR VAL THR SEQRES 15 C 495 MET GLU CYS SER PRO ARG THR GLY LEU ASP PHE ASN GLU SEQRES 16 C 495 MET VAL LEU LEU GLN MET GLU ASN LYS ALA TRP LEU VAL SEQRES 17 C 495 HIS ARG GLN TRP PHE LEU ASP LEU PRO LEU PRO TRP LEU SEQRES 18 C 495 PRO GLY ALA ASP THR GLN GLY SER ASN TRP ILE GLN LYS SEQRES 19 C 495 GLU THR LEU VAL THR PHE LYS ASN PRO HIS ALA LYS LYS SEQRES 20 C 495 GLN ASP VAL VAL VAL LEU GLY SER GLN GLU GLY ALA MET SEQRES 21 C 495 HIS THR ALA LEU THR GLY ALA THR GLU ILE GLN MET SER SEQRES 22 C 495 SER GLY ASN LEU LEU PHE THR GLY HIS LEU LYS CYS ARG SEQRES 23 C 495 LEU ARG MET ASP LYS LEU GLN LEU LYS GLY MET SER TYR SEQRES 24 C 495 SER MET CYS THR GLY LYS PHE LYS VAL VAL LYS GLU ILE SEQRES 25 C 495 ALA GLU THR GLN HIS GLY THR ILE VAL ILE ARG VAL GLN SEQRES 26 C 495 TYR GLU GLY ASP GLY SER PRO CYS LYS ILE PRO PHE GLU SEQRES 27 C 495 ILE MET ASP LEU GLU LYS ARG HIS VAL LEU GLY ARG LEU SEQRES 28 C 495 ILE THR VAL ASN PRO ILE VAL THR GLU LYS ASP SER PRO SEQRES 29 C 495 VAL ASN ILE GLU ALA GLU PRO PRO PHE GLY ASP SER TYR SEQRES 30 C 495 ILE ILE ILE GLY VAL GLU PRO GLY GLN LEU LYS LEU SER SEQRES 31 C 495 TRP PHE LYS LYS GLY SER SER ILE GLY GLN MET PHE GLU SEQRES 32 C 495 THR THR MET ARG GLY ALA LYS ARG MET ALA ILE LEU GLY SEQRES 33 C 495 ASP THR ALA TRP ASP PHE GLY SER LEU GLY GLY VAL PHE SEQRES 34 C 495 THR SER ILE GLY LYS ALA LEU HIS GLN VAL PHE GLY ALA SEQRES 35 C 495 ILE TYR GLY ALA ALA PHE SER GLY VAL SER TRP THR MET SEQRES 36 C 495 LYS ILE LEU ILE GLY VAL VAL ILE THR TRP ILE GLY MET SEQRES 37 C 495 ASN SER ARG SER THR SER LEU SER VAL SER LEU VAL LEU SEQRES 38 C 495 VAL GLY VAL VAL THR LEU TYR LEU GLY VAL MET VAL GLN SEQRES 39 C 495 ALA SEQRES 1 D 75 SER VAL ALA LEU VAL PRO HIS VAL GLY MET GLY LEU GLU SEQRES 2 D 75 THR ARG THR GLU THR TRP MET SER SER GLU GLY ALA TRP SEQRES 3 D 75 LYS HIS ALA GLN ARG ILE GLU THR TRP VAL LEU ARG HIS SEQRES 4 D 75 PRO GLY PHE THR ILE MET ALA ALA ILE LEU ALA TYR THR SEQRES 5 D 75 ILE GLY THR THR TYR PHE GLN ARG VAL LEU ILE PHE ILE SEQRES 6 D 75 LEU LEU THR ALA VAL ALA PRO SER MET THR SEQRES 1 E 495 MET ARG CYS ILE GLY ILE SER ASN ARG ASP PHE VAL GLU SEQRES 2 E 495 GLY VAL SER GLY GLY SER TRP VAL ASP ILE VAL LEU GLU SEQRES 3 E 495 HIS GLY SER CYS VAL THR THR MET ALA LYS ASN LYS PRO SEQRES 4 E 495 THR LEU ASP PHE GLU LEU ILE LYS THR GLU ALA LYS HIS SEQRES 5 E 495 PRO ALA THR LEU ARG LYS TYR CYS ILE GLU ALA LYS LEU SEQRES 6 E 495 THR ASN THR THR THR ALA SER ARG CYS PRO THR GLN GLY SEQRES 7 E 495 GLU PRO SER LEU ASN GLU GLU GLN ASP LYS ARG PHE VAL SEQRES 8 E 495 CYS LYS HIS SER MET VAL ASP ARG GLY TRP GLY ASN GLY SEQRES 9 E 495 CYS GLY LEU PHE GLY LYS GLY GLY ILE VAL THR CYS ALA SEQRES 10 E 495 MET PHE THR CYS LYS LYS ASN MET GLU GLY LYS ILE VAL SEQRES 11 E 495 GLN PRO GLU ASN LEU GLU TYR THR ILE VAL ILE THR PRO SEQRES 12 E 495 HIS SER GLY GLU GLU ASN ALA VAL GLY GLN ASP THR GLY SEQRES 13 E 495 LYS HIS GLY LYS GLU ILE LYS VAL THR PRO GLN SER SER SEQRES 14 E 495 ILE THR GLU ALA GLU LEU THR GLY TYR GLY THR VAL THR SEQRES 15 E 495 MET GLU CYS SER PRO ARG THR GLY LEU ASP PHE ASN GLU SEQRES 16 E 495 MET VAL LEU LEU GLN MET GLU ASN LYS ALA TRP LEU VAL SEQRES 17 E 495 HIS ARG GLN TRP PHE LEU ASP LEU PRO LEU PRO TRP LEU SEQRES 18 E 495 PRO GLY ALA ASP THR GLN GLY SER ASN TRP ILE GLN LYS SEQRES 19 E 495 GLU THR LEU VAL THR PHE LYS ASN PRO HIS ALA LYS LYS SEQRES 20 E 495 GLN ASP VAL VAL VAL LEU GLY SER GLN GLU GLY ALA MET SEQRES 21 E 495 HIS THR ALA LEU THR GLY ALA THR GLU ILE GLN MET SER SEQRES 22 E 495 SER GLY ASN LEU LEU PHE THR GLY HIS LEU LYS CYS ARG SEQRES 23 E 495 LEU ARG MET ASP LYS LEU GLN LEU LYS GLY MET SER TYR SEQRES 24 E 495 SER MET CYS THR GLY LYS PHE LYS VAL VAL LYS GLU ILE SEQRES 25 E 495 ALA GLU THR GLN HIS GLY THR ILE VAL ILE ARG VAL GLN SEQRES 26 E 495 TYR GLU GLY ASP GLY SER PRO CYS LYS ILE PRO PHE GLU SEQRES 27 E 495 ILE MET ASP LEU GLU LYS ARG HIS VAL LEU GLY ARG LEU SEQRES 28 E 495 ILE THR VAL ASN PRO ILE VAL THR GLU LYS ASP SER PRO SEQRES 29 E 495 VAL ASN ILE GLU ALA GLU PRO PRO PHE GLY ASP SER TYR SEQRES 30 E 495 ILE ILE ILE GLY VAL GLU PRO GLY GLN LEU LYS LEU SER SEQRES 31 E 495 TRP PHE LYS LYS GLY SER SER ILE GLY GLN MET PHE GLU SEQRES 32 E 495 THR THR MET ARG GLY ALA LYS ARG MET ALA ILE LEU GLY SEQRES 33 E 495 ASP THR ALA TRP ASP PHE GLY SER LEU GLY GLY VAL PHE SEQRES 34 E 495 THR SER ILE GLY LYS ALA LEU HIS GLN VAL PHE GLY ALA SEQRES 35 E 495 ILE TYR GLY ALA ALA PHE SER GLY VAL SER TRP THR MET SEQRES 36 E 495 LYS ILE LEU ILE GLY VAL VAL ILE THR TRP ILE GLY MET SEQRES 37 E 495 ASN SER ARG SER THR SER LEU SER VAL SER LEU VAL LEU SEQRES 38 E 495 VAL GLY VAL VAL THR LEU TYR LEU GLY VAL MET VAL GLN SEQRES 39 E 495 ALA SEQRES 1 F 75 SER VAL ALA LEU VAL PRO HIS VAL GLY MET GLY LEU GLU SEQRES 2 F 75 THR ARG THR GLU THR TRP MET SER SER GLU GLY ALA TRP SEQRES 3 F 75 LYS HIS ALA GLN ARG ILE GLU THR TRP VAL LEU ARG HIS SEQRES 4 F 75 PRO GLY PHE THR ILE MET ALA ALA ILE LEU ALA TYR THR SEQRES 5 F 75 ILE GLY THR THR TYR PHE GLN ARG VAL LEU ILE PHE ILE SEQRES 6 F 75 LEU LEU THR ALA VAL ALA PRO SER MET THR HET NAG A 501 14 HET NAG C 501 14 HET NAG E 501 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 7 NAG 3(C8 H15 N O6) HELIX 1 AA1 LEU A 82 ASP A 87 5 6 HELIX 2 AA2 GLN A 131 GLU A 133 5 3 HELIX 3 AA3 ASP A 192 ASN A 194 5 3 HELIX 4 AA4 ARG A 210 ASP A 215 1 6 HELIX 5 AA5 GLN A 233 THR A 236 5 4 HELIX 6 AA6 GLN A 256 LEU A 264 1 9 HELIX 7 AA7 SER A 396 GLY A 416 1 21 HELIX 8 AA8 ASP A 417 PHE A 422 5 6 HELIX 9 AA9 GLY A 427 PHE A 448 1 22 HELIX 10 AB1 SER A 452 ASN A 469 1 18 HELIX 11 AB2 SER A 472 MET A 492 1 21 HELIX 12 AB3 MET B 20 ALA B 25 1 6 HELIX 13 AB4 TRP B 26 HIS B 39 1 14 HELIX 14 AB5 HIS B 39 ILE B 53 1 15 HELIX 15 AB6 THR B 56 ALA B 71 1 16 HELIX 16 AB7 PRO B 72 MET B 74 5 3 HELIX 17 AB8 LEU C 82 ASP C 87 5 6 HELIX 18 AB9 GLN C 131 LEU C 135 5 5 HELIX 19 AC1 PRO C 187 GLY C 190 5 4 HELIX 20 AC2 ARG C 210 ASP C 215 1 6 HELIX 21 AC3 GLN C 233 VAL C 238 5 6 HELIX 22 AC4 GLN C 256 LEU C 264 1 9 HELIX 23 AC5 SER C 396 LEU C 415 1 20 HELIX 24 AC6 GLY C 416 PHE C 422 5 7 HELIX 25 AC7 GLY C 427 SER C 449 1 23 HELIX 26 AC8 SER C 452 ASN C 469 1 18 HELIX 27 AC9 SER C 472 VAL C 493 1 22 HELIX 28 AD1 SER D 1 VAL D 5 5 5 HELIX 29 AD2 MET D 20 TRP D 26 1 7 HELIX 30 AD3 TRP D 26 HIS D 39 1 14 HELIX 31 AD4 HIS D 39 GLY D 54 1 16 HELIX 32 AD5 THR D 56 THR D 75 1 20 HELIX 33 AD6 LEU E 82 ASP E 87 5 6 HELIX 34 AD7 GLN E 131 GLU E 133 5 3 HELIX 35 AD8 GLU E 147 VAL E 151 5 5 HELIX 36 AD9 PRO E 187 GLY E 190 5 4 HELIX 37 AE1 ARG E 210 ASP E 215 1 6 HELIX 38 AE2 GLN E 233 THR E 236 5 4 HELIX 39 AE3 GLN E 256 LEU E 264 1 9 HELIX 40 AE4 SER E 396 LEU E 415 1 20 HELIX 41 AE5 THR E 418 PHE E 422 5 5 HELIX 42 AE6 GLY E 427 SER E 449 1 23 HELIX 43 AE7 SER E 452 ASN E 469 1 18 HELIX 44 AE8 SER E 472 VAL E 493 1 22 HELIX 45 AE9 SER F 1 VAL F 5 5 5 HELIX 46 AF1 MET F 20 HIS F 39 1 20 HELIX 47 AF2 HIS F 39 GLY F 54 1 16 HELIX 48 AF3 THR F 56 THR F 75 1 20 SHEET 1 AA1 5 ARG A 9 GLU A 13 0 SHEET 2 AA1 5 CYS A 30 ALA A 35 1 O MET A 34 N VAL A 12 SHEET 3 AA1 5 LYS A 38 ALA A 50 -1 O PHE A 43 N VAL A 31 SHEET 4 AA1 5 LEU A 135 PRO A 143 -1 O THR A 138 N LYS A 47 SHEET 5 AA1 5 LYS A 160 VAL A 164 -1 O VAL A 164 N TYR A 137 SHEET 1 AA2 4 ARG A 9 GLU A 13 0 SHEET 2 AA2 4 CYS A 30 ALA A 35 1 O MET A 34 N VAL A 12 SHEET 3 AA2 4 LYS A 38 ALA A 50 -1 O PHE A 43 N VAL A 31 SHEET 4 AA2 4 LEU A 277 LEU A 278 -1 O LEU A 278 N THR A 48 SHEET 1 AA3 4 TRP A 20 GLU A 26 0 SHEET 2 AA3 4 HIS A 282 LYS A 291 -1 O CYS A 285 N ILE A 23 SHEET 3 AA3 4 GLY A 179 CYS A 185 -1 N THR A 182 O ARG A 288 SHEET 4 AA3 4 THR A 171 LEU A 175 -1 N ALA A 173 O VAL A 181 SHEET 1 AA4 4 PHE A 90 ARG A 99 0 SHEET 2 AA4 4 GLY A 109 ILE A 129 -1 O ILE A 113 N SER A 95 SHEET 3 AA4 4 ALA A 54 SER A 72 -1 N ALA A 54 O ILE A 129 SHEET 4 AA4 4 TRP A 220 PRO A 222 -1 O LEU A 221 N LYS A 58 SHEET 1 AA5 5 PHE A 90 ARG A 99 0 SHEET 2 AA5 5 GLY A 109 ILE A 129 -1 O ILE A 113 N SER A 95 SHEET 3 AA5 5 MET A 196 GLN A 200 -1 O LEU A 198 N LYS A 128 SHEET 4 AA5 5 ALA A 205 HIS A 209 -1 O VAL A 208 N VAL A 197 SHEET 5 AA5 5 THR A 268 ILE A 270 -1 O THR A 268 N LEU A 207 SHEET 1 AA6 2 VAL A 238 LYS A 241 0 SHEET 2 AA6 2 ASP A 249 VAL A 252 -1 O ASP A 249 N LYS A 241 SHEET 1 AA7 4 PHE A 306 GLU A 314 0 SHEET 2 AA7 4 ILE A 320 TYR A 326 -1 O GLN A 325 N LYS A 307 SHEET 3 AA7 4 VAL A 365 GLU A 370 -1 O ALA A 369 N ILE A 320 SHEET 4 AA7 4 ARG A 350 LEU A 351 -1 N ARG A 350 O GLU A 370 SHEET 1 AA8 2 CYS A 333 LYS A 334 0 SHEET 2 AA8 2 ILE A 357 VAL A 358 -1 O VAL A 358 N CYS A 333 SHEET 1 AA9 3 PHE A 337 MET A 340 0 SHEET 2 AA9 3 ASP A 375 ILE A 380 -1 O ILE A 379 N GLU A 338 SHEET 3 AA9 3 LEU A 387 PHE A 392 -1 O LEU A 389 N ILE A 378 SHEET 1 AB1 5 ARG C 9 GLU C 13 0 SHEET 2 AB1 5 CYS C 30 MET C 34 1 O THR C 32 N ASP C 10 SHEET 3 AB1 5 LEU C 41 GLU C 49 -1 O PHE C 43 N VAL C 31 SHEET 4 AB1 5 TYR C 137 PRO C 143 -1 O VAL C 140 N GLU C 44 SHEET 5 AB1 5 LYS C 160 VAL C 164 -1 O LYS C 160 N ILE C 141 SHEET 1 AB2 4 ARG C 9 GLU C 13 0 SHEET 2 AB2 4 CYS C 30 MET C 34 1 O THR C 32 N ASP C 10 SHEET 3 AB2 4 LEU C 41 GLU C 49 -1 O PHE C 43 N VAL C 31 SHEET 4 AB2 4 LEU C 277 LEU C 278 -1 O LEU C 278 N THR C 48 SHEET 1 AB3 4 TRP C 20 GLU C 26 0 SHEET 2 AB3 4 HIS C 282 ARG C 288 -1 O CYS C 285 N ILE C 23 SHEET 3 AB3 4 GLY C 179 CYS C 185 -1 N THR C 182 O ARG C 288 SHEET 4 AB3 4 ILE C 170 LEU C 175 -1 N ALA C 173 O VAL C 181 SHEET 1 AB4 4 LYS C 93 ASP C 98 0 SHEET 2 AB4 4 LYS C 110 ASN C 124 -1 O ILE C 113 N SER C 95 SHEET 3 AB4 4 ALA C 54 SER C 72 -1 N GLU C 62 O LYS C 122 SHEET 4 AB4 4 TRP C 220 LEU C 221 -1 O LEU C 221 N LYS C 58 SHEET 1 AB5 7 LYS C 93 ASP C 98 0 SHEET 2 AB5 7 LYS C 110 ASN C 124 -1 O ILE C 113 N SER C 95 SHEET 3 AB5 7 ALA C 54 SER C 72 -1 N GLU C 62 O LYS C 122 SHEET 4 AB5 7 GLY C 127 ILE C 129 -1 O ILE C 129 N ALA C 54 SHEET 5 AB5 7 MET C 196 MET C 201 -1 O LEU C 198 N LYS C 128 SHEET 6 AB5 7 LYS C 204 HIS C 209 -1 O LYS C 204 N MET C 201 SHEET 7 AB5 7 THR C 268 ILE C 270 -1 O THR C 268 N LEU C 207 SHEET 1 AB6 2 THR C 239 LYS C 241 0 SHEET 2 AB6 2 ASP C 249 VAL C 251 -1 O VAL C 251 N THR C 239 SHEET 1 AB7 3 SER C 300 MET C 301 0 SHEET 2 AB7 3 CYS C 333 LYS C 334 1 O LYS C 334 N SER C 300 SHEET 3 AB7 3 ILE C 357 VAL C 358 -1 O VAL C 358 N CYS C 333 SHEET 1 AB8 4 LYS C 305 GLU C 314 0 SHEET 2 AB8 4 ILE C 320 GLU C 327 -1 O GLU C 327 N LYS C 305 SHEET 3 AB8 4 VAL C 365 GLU C 370 -1 O ILE C 367 N ILE C 322 SHEET 4 AB8 4 ARG C 350 LEU C 351 -1 N ARG C 350 O GLU C 370 SHEET 1 AB9 3 PHE C 337 MET C 340 0 SHEET 2 AB9 3 TYR C 377 ILE C 380 -1 O TYR C 377 N MET C 340 SHEET 3 AB9 3 LEU C 387 SER C 390 -1 O LEU C 387 N ILE C 380 SHEET 1 AC1 5 ARG E 9 GLU E 13 0 SHEET 2 AC1 5 CYS E 30 ALA E 35 1 O MET E 34 N VAL E 12 SHEET 3 AC1 5 LYS E 38 ALA E 50 -1 O PHE E 43 N VAL E 31 SHEET 4 AC1 5 LEU E 135 PRO E 143 -1 O THR E 142 N ASP E 42 SHEET 5 AC1 5 LYS E 160 VAL E 164 -1 O LYS E 160 N ILE E 141 SHEET 1 AC2 4 ARG E 9 GLU E 13 0 SHEET 2 AC2 4 CYS E 30 ALA E 35 1 O MET E 34 N VAL E 12 SHEET 3 AC2 4 LYS E 38 ALA E 50 -1 O PHE E 43 N VAL E 31 SHEET 4 AC2 4 ASN E 276 LEU E 277 -1 O ASN E 276 N ALA E 50 SHEET 1 AC3 4 TRP E 20 GLU E 26 0 SHEET 2 AC3 4 HIS E 282 ARG E 288 -1 O CYS E 285 N ILE E 23 SHEET 3 AC3 4 THR E 180 CYS E 185 -1 N THR E 182 O ARG E 288 SHEET 4 AC3 4 ILE E 170 GLU E 174 -1 N THR E 171 O MET E 183 SHEET 1 AC4 5 ALA E 54 THR E 55 0 SHEET 2 AC4 5 GLU E 126 ILE E 129 -1 O ILE E 129 N ALA E 54 SHEET 3 AC4 5 MET E 196 GLN E 200 -1 O LEU E 198 N LYS E 128 SHEET 4 AC4 5 ALA E 205 HIS E 209 -1 O VAL E 208 N VAL E 197 SHEET 5 AC4 5 GLU E 269 ILE E 270 -1 O ILE E 270 N ALA E 205 SHEET 1 AC5 3 CYS E 60 LEU E 65 0 SHEET 2 AC5 3 LYS E 110 ASN E 124 -1 O LYS E 122 N GLU E 62 SHEET 3 AC5 3 THR E 69 PRO E 75 -1 N THR E 69 O CYS E 116 SHEET 1 AC6 3 CYS E 60 LEU E 65 0 SHEET 2 AC6 3 LYS E 110 ASN E 124 -1 O LYS E 122 N GLU E 62 SHEET 3 AC6 3 PHE E 90 ASP E 98 -1 N SER E 95 O ILE E 113 SHEET 1 AC7 2 VAL E 238 LYS E 241 0 SHEET 2 AC7 2 ASP E 249 VAL E 252 -1 O VAL E 251 N THR E 239 SHEET 1 AC8 4 LYS E 305 GLU E 314 0 SHEET 2 AC8 4 ILE E 320 GLU E 327 -1 O VAL E 321 N ALA E 313 SHEET 3 AC8 4 VAL E 365 GLU E 370 -1 O ALA E 369 N ILE E 320 SHEET 4 AC8 4 ARG E 350 LEU E 351 -1 N ARG E 350 O GLU E 370 SHEET 1 AC9 2 CYS E 333 LYS E 334 0 SHEET 2 AC9 2 ILE E 357 VAL E 358 -1 O VAL E 358 N CYS E 333 SHEET 1 AD1 3 PHE E 337 MET E 340 0 SHEET 2 AD1 3 ASP E 375 ILE E 380 -1 O ILE E 379 N GLU E 338 SHEET 3 AD1 3 LEU E 387 PHE E 392 -1 O LEU E 389 N ILE E 378 SSBOND 1 CYS A 3 CYS A 30 1555 1555 2.03 SSBOND 2 CYS A 302 CYS A 333 1555 1555 2.03 SSBOND 3 CYS C 3 CYS C 30 1555 1555 2.03 SSBOND 4 CYS C 60 CYS C 121 1555 1555 2.03 SSBOND 5 CYS C 74 CYS C 105 1555 1555 2.04 SSBOND 6 CYS C 92 CYS C 116 1555 1555 2.03 SSBOND 7 CYS C 185 CYS C 285 1555 1555 2.03 SSBOND 8 CYS C 302 CYS C 333 1555 1555 2.03 SSBOND 9 CYS E 3 CYS E 30 1555 1555 2.03 SSBOND 10 CYS E 92 CYS E 116 1555 1555 2.03 SSBOND 11 CYS E 185 CYS E 285 1555 1555 2.03 SSBOND 12 CYS E 302 CYS E 333 1555 1555 2.03 LINK ND2 ASN A 67 C1 NAG A 501 1555 1555 1.44 LINK ND2 ASN C 67 C1 NAG C 501 1555 1555 1.44 LINK ND2 ASN E 67 C1 NAG E 501 1555 1555 1.44 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 3798 ALA A 495 TER 4388 THR B 75 TER 8186 ALA C 495 TER 8776 THR D 75 TER 12574 ALA E 495 TER 13164 THR F 75 HETATM13165 C1 NAG A 501 -145.190-130.819-126.374 1.00 29.53 C HETATM13166 C2 NAG A 501 -144.636-131.463-127.646 1.00 29.59 C HETATM13167 C3 NAG A 501 -145.770-131.784-128.616 1.00 30.68 C HETATM13168 C4 NAG A 501 -146.845-132.611-127.926 1.00 32.86 C HETATM13169 C5 NAG A 501 -147.311-131.906-126.657 1.00 30.82 C HETATM13170 C6 NAG A 501 -148.306-132.715-125.860 1.00 31.36 C HETATM13171 C7 NAG A 501 -142.337-130.716-128.076 1.00 31.28 C HETATM13172 C8 NAG A 501 -141.470-129.740-128.813 1.00 28.06 C HETATM13173 N2 NAG A 501 -143.653-130.600-128.280 1.00 28.87 N HETATM13174 O3 NAG A 501 -145.250-132.496-129.733 1.00 31.43 O HETATM13175 O4 NAG A 501 -147.956-132.793-128.796 1.00 34.41 O HETATM13176 O5 NAG A 501 -146.187-131.669-125.799 1.00 31.42 O HETATM13177 O6 NAG A 501 -147.682-133.813-125.208 1.00 31.72 O HETATM13178 O7 NAG A 501 -141.867-131.570-127.331 1.00 31.95 O HETATM13179 C1 NAG C 501 -128.172-126.713-144.970 1.00 28.32 C HETATM13180 C2 NAG C 501 -129.584-127.086-144.513 1.00 28.92 C HETATM13181 C3 NAG C 501 -130.029-128.388-145.172 1.00 32.09 C HETATM13182 C4 NAG C 501 -129.872-128.304-146.683 1.00 32.24 C HETATM13183 C5 NAG C 501 -128.444-127.902-147.035 1.00 29.83 C HETATM13184 C6 NAG C 501 -128.232-127.701-148.517 1.00 30.94 C HETATM13185 C7 NAG C 501 -130.121-126.238-142.270 1.00 30.65 C HETATM13186 C8 NAG C 501 -130.111-126.534-140.801 1.00 28.29 C HETATM13187 N2 NAG C 501 -129.646-127.202-143.065 1.00 30.10 N HETATM13188 O3 NAG C 501 -131.388-128.645-144.837 1.00 32.17 O HETATM13189 O4 NAG C 501 -130.167-129.563-147.276 1.00 34.11 O HETATM13190 O5 NAG C 501 -128.126-126.658-146.398 1.00 29.67 O HETATM13191 O6 NAG C 501 -126.856-127.799-148.860 1.00 32.79 O HETATM13192 O7 NAG C 501 -130.537-125.174-142.716 1.00 29.16 O HETATM13193 C1 NAG E 501 -90.870-149.065-146.193 1.00 28.43 C HETATM13194 C2 NAG E 501 -89.815-149.415-147.247 1.00 29.15 C HETATM13195 C3 NAG E 501 -90.481-149.947-148.514 1.00 30.67 C HETATM13196 C4 NAG E 501 -91.430-151.089-148.181 1.00 30.34 C HETATM13197 C5 NAG E 501 -92.423-150.641-147.116 1.00 30.23 C HETATM13198 C6 NAG E 501 -93.348-151.746-146.663 1.00 29.62 C HETATM13199 C7 NAG E 501 -87.823-148.008-146.951 1.00 28.95 C HETATM13200 C8 NAG E 501 -87.390-149.003-145.917 1.00 28.50 C HETATM13201 N2 NAG E 501 -88.989-148.259-147.554 1.00 30.72 N HETATM13202 O3 NAG E 501 -89.479-150.398-149.417 1.00 29.38 O HETATM13203 O4 NAG E 501 -92.136-151.494-149.348 1.00 31.71 O HETATM13204 O5 NAG E 501 -91.708-150.198-145.955 1.00 29.69 O HETATM13205 O6 NAG E 501 -94.599-151.227-146.231 1.00 30.08 O HETATM13206 O7 NAG E 501 -87.147-147.023-147.229 1.00 27.46 O CONECT 25 223 CONECT 223 25 CONECT 51713165 CONECT 2328 2565 CONECT 2565 2328 CONECT 4413 4611 CONECT 4611 4413 CONECT 4851 5306 CONECT 490513179 CONECT 4954 5197 CONECT 5098 5269 CONECT 5197 4954 CONECT 5269 5098 CONECT 5306 4851 CONECT 5790 6577 CONECT 6577 5790 CONECT 6716 6953 CONECT 6953 6716 CONECT 8801 8999 CONECT 8999 8801 CONECT 929313193 CONECT 9486 9657 CONECT 9657 9486 CONECT1017810965 CONECT1096510178 CONECT1110411341 CONECT1134111104 CONECT13165 5171316613176 CONECT13166131651316713173 CONECT13167131661316813174 CONECT13168131671316913175 CONECT13169131681317013176 CONECT131701316913177 CONECT13171131721317313178 CONECT1317213171 CONECT131731316613171 CONECT1317413167 CONECT1317513168 CONECT131761316513169 CONECT1317713170 CONECT1317813171 CONECT13179 49051318013190 CONECT13180131791318113187 CONECT13181131801318213188 CONECT13182131811318313189 CONECT13183131821318413190 CONECT131841318313191 CONECT13185131861318713192 CONECT1318613185 CONECT131871318013185 CONECT1318813181 CONECT1318913182 CONECT131901317913183 CONECT1319113184 CONECT1319213185 CONECT13193 92931319413204 CONECT13194131931319513201 CONECT13195131941319613202 CONECT13196131951319713203 CONECT13197131961319813204 CONECT131981319713205 CONECT13199132001320113206 CONECT1320013199 CONECT132011319413199 CONECT1320213195 CONECT1320313196 CONECT132041319313197 CONECT1320513198 CONECT1320613199 MASTER 370 0 3 48 104 0 0 613200 6 69 135 END