data_8Y8R # _entry.id 8Y8R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8Y8R pdb_00008y8r 10.2210/pdb8y8r/pdb WWPDB D_1300045006 ? ? EMDB EMD-39056 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-03-19 ? 2 'EM metadata' 1 0 2025-03-19 ? 3 FSC 1 0 2025-03-19 ? 4 'Half map' 1 0 2025-03-19 1 5 'Half map' 1 0 2025-03-19 2 6 Image 1 0 2025-03-19 ? 7 Mask 1 0 2025-03-19 ? 8 'Primary map' 1 0 2025-03-19 ? 9 'Structure model' 1 1 2025-04-02 ? 10 FSC 1 0 2025-03-19 ? 11 'Half map' 1 0 2025-03-19 1 12 'Half map' 1 0 2025-03-19 2 13 Image 1 0 2025-03-19 ? 14 Mask 1 0 2025-03-19 ? 15 'Primary map' 1 0 2025-03-19 ? 16 'Structure model' 1 2 2025-07-02 ? 17 'EM metadata' 1 1 2025-07-02 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 Mask repository 'Initial release' ? ? 8 8 'Primary map' repository 'Initial release' ? ? 9 10 FSC repository 'Initial release' ? ? 10 11 'Half map' repository 'Initial release' ? ? 11 12 'Half map' repository 'Initial release' ? ? 12 13 Image repository 'Initial release' ? ? 13 14 Mask repository 'Initial release' ? ? 14 15 'Primary map' repository 'Initial release' ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 9 'Structure model' 'Data collection' 2 9 'Structure model' 'Database references' 3 16 'Structure model' 'Data collection' 4 17 'EM metadata' 'Data processing' 5 17 'EM metadata' 'Experimental summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 9 'Structure model' citation 2 9 'Structure model' em_admin 3 16 'Structure model' em_admin 4 16 'Structure model' em_software 5 17 'EM metadata' em_admin 6 17 'EM metadata' em_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 9 'Structure model' '_citation.journal_volume' 2 9 'Structure model' '_citation.page_first' 3 9 'Structure model' '_citation.page_last' 4 9 'Structure model' '_citation.pdbx_database_id_PubMed' 5 9 'Structure model' '_citation.title' 6 9 'Structure model' '_em_admin.last_update' 7 16 'Structure model' '_em_admin.last_update' 8 16 'Structure model' '_em_software.name' 9 17 'EM metadata' '_em_admin.last_update' 10 17 'EM metadata' '_em_software.name' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8Y8R _pdbx_database_status.recvd_initial_deposition_date 2024-02-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of AQP3 Y212T in DDM micelle' _pdbx_database_related.db_id EMD-39056 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email yoshi.cesp@tmd.ac.jp _pdbx_contact_author.name_first Yoshinori _pdbx_contact_author.name_last Fujiyoshi _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-8070-1493 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kozai, D.' 1 ? 'Suzuki, S.' 2 ? 'Kamegawa, A.' 3 ? 'Nishikawa, K.' 4 ? 'Suzuki, H.' 5 ? 'Fujiyoshi, Y.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 16 _citation.language ? _citation.page_first 2653 _citation.page_last 2653 _citation.title 'Narrowed pore conformations of aquaglyceroporins AQP3 and GlpF.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-025-57728-3 _citation.pdbx_database_id_PubMed 40113770 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kozai, D.' 1 ? primary 'Inoue, M.' 2 ? primary 'Suzuki, S.' 3 ? primary 'Kamegawa, A.' 4 ? primary 'Nishikawa, K.' 5 ? primary 'Suzuki, H.' 6 ? primary 'Ekimoto, T.' 7 ? primary 'Ikeguchi, M.' 8 ? primary 'Fujiyoshi, Y.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Aquaporin-3 33460.867 1 ? Y212T ? '2-9 His tag 14-19 thrombin digestion site' 2 non-polymer syn DODECYL-BETA-D-MALTOSIDE 510.615 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'AQP-3,31.4 kDa water channel protein,Aquaglyceroporin-3' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHHHAAAGLVPRGSMGRQKELMNRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINL AFGFAVTLAILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPIYTLAQTLGAFLGAGIVFGLYYDAIWAFAGNELVVSGPN GTAGIFATYPSGHLDMVNGFFDQFIGTAALIVCVLAIVDPYNNPVPRGLEAFTVGLVVLVIGTSMGFNSGTAVNPARDFG PRLFTALAGWGSEVFTTGQNWWWVPIVSPLLGSIGGVFVYQLMIGCHLEQPPPSTEAENVKLAHMKHKEQI ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHHHAAAGLVPRGSMGRQKELMNRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINL AFGFAVTLAILVAGQVSGAHLNPAVTFAMCFLAREPWIKLPIYTLAQTLGAFLGAGIVFGLYYDAIWAFAGNELVVSGPN GTAGIFATYPSGHLDMVNGFFDQFIGTAALIVCVLAIVDPYNNPVPRGLEAFTVGLVVLVIGTSMGFNSGTAVNPARDFG PRLFTALAGWGSEVFTTGQNWWWVPIVSPLLGSIGGVFVYQLMIGCHLEQPPPSTEAENVKLAHMKHKEQI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name DODECYL-BETA-D-MALTOSIDE _pdbx_entity_nonpoly.comp_id LMT # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 ALA n 1 11 ALA n 1 12 ALA n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 MET n 1 21 GLY n 1 22 ARG n 1 23 GLN n 1 24 LYS n 1 25 GLU n 1 26 LEU n 1 27 MET n 1 28 ASN n 1 29 ARG n 1 30 CYS n 1 31 GLY n 1 32 GLU n 1 33 MET n 1 34 LEU n 1 35 HIS n 1 36 ILE n 1 37 ARG n 1 38 TYR n 1 39 ARG n 1 40 LEU n 1 41 LEU n 1 42 ARG n 1 43 GLN n 1 44 ALA n 1 45 LEU n 1 46 ALA n 1 47 GLU n 1 48 CYS n 1 49 LEU n 1 50 GLY n 1 51 THR n 1 52 LEU n 1 53 ILE n 1 54 LEU n 1 55 VAL n 1 56 MET n 1 57 PHE n 1 58 GLY n 1 59 CYS n 1 60 GLY n 1 61 SER n 1 62 VAL n 1 63 ALA n 1 64 GLN n 1 65 VAL n 1 66 VAL n 1 67 LEU n 1 68 SER n 1 69 ARG n 1 70 GLY n 1 71 THR n 1 72 HIS n 1 73 GLY n 1 74 GLY n 1 75 PHE n 1 76 LEU n 1 77 THR n 1 78 ILE n 1 79 ASN n 1 80 LEU n 1 81 ALA n 1 82 PHE n 1 83 GLY n 1 84 PHE n 1 85 ALA n 1 86 VAL n 1 87 THR n 1 88 LEU n 1 89 ALA n 1 90 ILE n 1 91 LEU n 1 92 VAL n 1 93 ALA n 1 94 GLY n 1 95 GLN n 1 96 VAL n 1 97 SER n 1 98 GLY n 1 99 ALA n 1 100 HIS n 1 101 LEU n 1 102 ASN n 1 103 PRO n 1 104 ALA n 1 105 VAL n 1 106 THR n 1 107 PHE n 1 108 ALA n 1 109 MET n 1 110 CYS n 1 111 PHE n 1 112 LEU n 1 113 ALA n 1 114 ARG n 1 115 GLU n 1 116 PRO n 1 117 TRP n 1 118 ILE n 1 119 LYS n 1 120 LEU n 1 121 PRO n 1 122 ILE n 1 123 TYR n 1 124 THR n 1 125 LEU n 1 126 ALA n 1 127 GLN n 1 128 THR n 1 129 LEU n 1 130 GLY n 1 131 ALA n 1 132 PHE n 1 133 LEU n 1 134 GLY n 1 135 ALA n 1 136 GLY n 1 137 ILE n 1 138 VAL n 1 139 PHE n 1 140 GLY n 1 141 LEU n 1 142 TYR n 1 143 TYR n 1 144 ASP n 1 145 ALA n 1 146 ILE n 1 147 TRP n 1 148 ALA n 1 149 PHE n 1 150 ALA n 1 151 GLY n 1 152 ASN n 1 153 GLU n 1 154 LEU n 1 155 VAL n 1 156 VAL n 1 157 SER n 1 158 GLY n 1 159 PRO n 1 160 ASN n 1 161 GLY n 1 162 THR n 1 163 ALA n 1 164 GLY n 1 165 ILE n 1 166 PHE n 1 167 ALA n 1 168 THR n 1 169 TYR n 1 170 PRO n 1 171 SER n 1 172 GLY n 1 173 HIS n 1 174 LEU n 1 175 ASP n 1 176 MET n 1 177 VAL n 1 178 ASN n 1 179 GLY n 1 180 PHE n 1 181 PHE n 1 182 ASP n 1 183 GLN n 1 184 PHE n 1 185 ILE n 1 186 GLY n 1 187 THR n 1 188 ALA n 1 189 ALA n 1 190 LEU n 1 191 ILE n 1 192 VAL n 1 193 CYS n 1 194 VAL n 1 195 LEU n 1 196 ALA n 1 197 ILE n 1 198 VAL n 1 199 ASP n 1 200 PRO n 1 201 TYR n 1 202 ASN n 1 203 ASN n 1 204 PRO n 1 205 VAL n 1 206 PRO n 1 207 ARG n 1 208 GLY n 1 209 LEU n 1 210 GLU n 1 211 ALA n 1 212 PHE n 1 213 THR n 1 214 VAL n 1 215 GLY n 1 216 LEU n 1 217 VAL n 1 218 VAL n 1 219 LEU n 1 220 VAL n 1 221 ILE n 1 222 GLY n 1 223 THR n 1 224 SER n 1 225 MET n 1 226 GLY n 1 227 PHE n 1 228 ASN n 1 229 SER n 1 230 GLY n 1 231 THR n 1 232 ALA n 1 233 VAL n 1 234 ASN n 1 235 PRO n 1 236 ALA n 1 237 ARG n 1 238 ASP n 1 239 PHE n 1 240 GLY n 1 241 PRO n 1 242 ARG n 1 243 LEU n 1 244 PHE n 1 245 THR n 1 246 ALA n 1 247 LEU n 1 248 ALA n 1 249 GLY n 1 250 TRP n 1 251 GLY n 1 252 SER n 1 253 GLU n 1 254 VAL n 1 255 PHE n 1 256 THR n 1 257 THR n 1 258 GLY n 1 259 GLN n 1 260 ASN n 1 261 TRP n 1 262 TRP n 1 263 TRP n 1 264 VAL n 1 265 PRO n 1 266 ILE n 1 267 VAL n 1 268 SER n 1 269 PRO n 1 270 LEU n 1 271 LEU n 1 272 GLY n 1 273 SER n 1 274 ILE n 1 275 GLY n 1 276 GLY n 1 277 VAL n 1 278 PHE n 1 279 VAL n 1 280 TYR n 1 281 GLN n 1 282 LEU n 1 283 MET n 1 284 ILE n 1 285 GLY n 1 286 CYS n 1 287 HIS n 1 288 LEU n 1 289 GLU n 1 290 GLN n 1 291 PRO n 1 292 PRO n 1 293 PRO n 1 294 SER n 1 295 THR n 1 296 GLU n 1 297 ALA n 1 298 GLU n 1 299 ASN n 1 300 VAL n 1 301 LYS n 1 302 LEU n 1 303 ALA n 1 304 HIS n 1 305 MET n 1 306 LYS n 1 307 HIS n 1 308 LYS n 1 309 GLU n 1 310 GLN n 1 311 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 311 _entity_src_gen.gene_src_common_name 'Norway rat' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Aqp3 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LMT D-saccharide . DODECYL-BETA-D-MALTOSIDE ? 'C24 H46 O11' 510.615 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -18 ? ? ? A . n A 1 2 HIS 2 -17 ? ? ? A . n A 1 3 HIS 3 -16 ? ? ? A . n A 1 4 HIS 4 -15 ? ? ? A . n A 1 5 HIS 5 -14 ? ? ? A . n A 1 6 HIS 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 ALA 10 -9 ? ? ? A . n A 1 11 ALA 11 -8 ? ? ? A . n A 1 12 ALA 12 -7 ? ? ? A . n A 1 13 GLY 13 -6 ? ? ? A . n A 1 14 LEU 14 -5 ? ? ? A . n A 1 15 VAL 15 -4 ? ? ? A . n A 1 16 PRO 16 -3 ? ? ? A . n A 1 17 ARG 17 -2 ? ? ? A . n A 1 18 GLY 18 -1 ? ? ? A . n A 1 19 SER 19 0 ? ? ? A . n A 1 20 MET 20 1 ? ? ? A . n A 1 21 GLY 21 2 ? ? ? A . n A 1 22 ARG 22 3 ? ? ? A . n A 1 23 GLN 23 4 4 GLN GLN A . n A 1 24 LYS 24 5 5 LYS LYS A . n A 1 25 GLU 25 6 6 GLU GLU A . n A 1 26 LEU 26 7 7 LEU LEU A . n A 1 27 MET 27 8 8 MET MET A . n A 1 28 ASN 28 9 9 ASN ASN A . n A 1 29 ARG 29 10 10 ARG ARG A . n A 1 30 CYS 30 11 11 CYS CYS A . n A 1 31 GLY 31 12 12 GLY GLY A . n A 1 32 GLU 32 13 13 GLU GLU A . n A 1 33 MET 33 14 14 MET MET A . n A 1 34 LEU 34 15 15 LEU LEU A . n A 1 35 HIS 35 16 16 HIS HIS A . n A 1 36 ILE 36 17 17 ILE ILE A . n A 1 37 ARG 37 18 18 ARG ARG A . n A 1 38 TYR 38 19 19 TYR TYR A . n A 1 39 ARG 39 20 20 ARG ARG A . n A 1 40 LEU 40 21 21 LEU LEU A . n A 1 41 LEU 41 22 22 LEU LEU A . n A 1 42 ARG 42 23 23 ARG ARG A . n A 1 43 GLN 43 24 24 GLN GLN A . n A 1 44 ALA 44 25 25 ALA ALA A . n A 1 45 LEU 45 26 26 LEU LEU A . n A 1 46 ALA 46 27 27 ALA ALA A . n A 1 47 GLU 47 28 28 GLU GLU A . n A 1 48 CYS 48 29 29 CYS CYS A . n A 1 49 LEU 49 30 30 LEU LEU A . n A 1 50 GLY 50 31 31 GLY GLY A . n A 1 51 THR 51 32 32 THR THR A . n A 1 52 LEU 52 33 33 LEU LEU A . n A 1 53 ILE 53 34 34 ILE ILE A . n A 1 54 LEU 54 35 35 LEU LEU A . n A 1 55 VAL 55 36 36 VAL VAL A . n A 1 56 MET 56 37 37 MET MET A . n A 1 57 PHE 57 38 38 PHE PHE A . n A 1 58 GLY 58 39 39 GLY GLY A . n A 1 59 CYS 59 40 40 CYS CYS A . n A 1 60 GLY 60 41 41 GLY GLY A . n A 1 61 SER 61 42 42 SER SER A . n A 1 62 VAL 62 43 43 VAL VAL A . n A 1 63 ALA 63 44 44 ALA ALA A . n A 1 64 GLN 64 45 45 GLN GLN A . n A 1 65 VAL 65 46 46 VAL VAL A . n A 1 66 VAL 66 47 47 VAL VAL A . n A 1 67 LEU 67 48 48 LEU LEU A . n A 1 68 SER 68 49 49 SER SER A . n A 1 69 ARG 69 50 50 ARG ARG A . n A 1 70 GLY 70 51 51 GLY GLY A . n A 1 71 THR 71 52 52 THR THR A . n A 1 72 HIS 72 53 53 HIS HIS A . n A 1 73 GLY 73 54 54 GLY GLY A . n A 1 74 GLY 74 55 55 GLY GLY A . n A 1 75 PHE 75 56 56 PHE PHE A . n A 1 76 LEU 76 57 57 LEU LEU A . n A 1 77 THR 77 58 58 THR THR A . n A 1 78 ILE 78 59 59 ILE ILE A . n A 1 79 ASN 79 60 60 ASN ASN A . n A 1 80 LEU 80 61 61 LEU LEU A . n A 1 81 ALA 81 62 62 ALA ALA A . n A 1 82 PHE 82 63 63 PHE PHE A . n A 1 83 GLY 83 64 64 GLY GLY A . n A 1 84 PHE 84 65 65 PHE PHE A . n A 1 85 ALA 85 66 66 ALA ALA A . n A 1 86 VAL 86 67 67 VAL VAL A . n A 1 87 THR 87 68 68 THR THR A . n A 1 88 LEU 88 69 69 LEU LEU A . n A 1 89 ALA 89 70 70 ALA ALA A . n A 1 90 ILE 90 71 71 ILE ILE A . n A 1 91 LEU 91 72 72 LEU LEU A . n A 1 92 VAL 92 73 73 VAL VAL A . n A 1 93 ALA 93 74 74 ALA ALA A . n A 1 94 GLY 94 75 75 GLY GLY A . n A 1 95 GLN 95 76 76 GLN GLN A . n A 1 96 VAL 96 77 77 VAL VAL A . n A 1 97 SER 97 78 78 SER SER A . n A 1 98 GLY 98 79 79 GLY GLY A . n A 1 99 ALA 99 80 80 ALA ALA A . n A 1 100 HIS 100 81 81 HIS HIS A . n A 1 101 LEU 101 82 82 LEU LEU A . n A 1 102 ASN 102 83 83 ASN ASN A . n A 1 103 PRO 103 84 84 PRO PRO A . n A 1 104 ALA 104 85 85 ALA ALA A . n A 1 105 VAL 105 86 86 VAL VAL A . n A 1 106 THR 106 87 87 THR THR A . n A 1 107 PHE 107 88 88 PHE PHE A . n A 1 108 ALA 108 89 89 ALA ALA A . n A 1 109 MET 109 90 90 MET MET A . n A 1 110 CYS 110 91 91 CYS CYS A . n A 1 111 PHE 111 92 92 PHE PHE A . n A 1 112 LEU 112 93 93 LEU LEU A . n A 1 113 ALA 113 94 94 ALA ALA A . n A 1 114 ARG 114 95 95 ARG ARG A . n A 1 115 GLU 115 96 96 GLU GLU A . n A 1 116 PRO 116 97 97 PRO PRO A . n A 1 117 TRP 117 98 98 TRP TRP A . n A 1 118 ILE 118 99 99 ILE ILE A . n A 1 119 LYS 119 100 100 LYS LYS A . n A 1 120 LEU 120 101 101 LEU LEU A . n A 1 121 PRO 121 102 102 PRO PRO A . n A 1 122 ILE 122 103 103 ILE ILE A . n A 1 123 TYR 123 104 104 TYR TYR A . n A 1 124 THR 124 105 105 THR THR A . n A 1 125 LEU 125 106 106 LEU LEU A . n A 1 126 ALA 126 107 107 ALA ALA A . n A 1 127 GLN 127 108 108 GLN GLN A . n A 1 128 THR 128 109 109 THR THR A . n A 1 129 LEU 129 110 110 LEU LEU A . n A 1 130 GLY 130 111 111 GLY GLY A . n A 1 131 ALA 131 112 112 ALA ALA A . n A 1 132 PHE 132 113 113 PHE PHE A . n A 1 133 LEU 133 114 114 LEU LEU A . n A 1 134 GLY 134 115 115 GLY GLY A . n A 1 135 ALA 135 116 116 ALA ALA A . n A 1 136 GLY 136 117 117 GLY GLY A . n A 1 137 ILE 137 118 118 ILE ILE A . n A 1 138 VAL 138 119 119 VAL VAL A . n A 1 139 PHE 139 120 120 PHE PHE A . n A 1 140 GLY 140 121 121 GLY GLY A . n A 1 141 LEU 141 122 122 LEU LEU A . n A 1 142 TYR 142 123 123 TYR TYR A . n A 1 143 TYR 143 124 124 TYR TYR A . n A 1 144 ASP 144 125 125 ASP ASP A . n A 1 145 ALA 145 126 126 ALA ALA A . n A 1 146 ILE 146 127 127 ILE ILE A . n A 1 147 TRP 147 128 128 TRP TRP A . n A 1 148 ALA 148 129 129 ALA ALA A . n A 1 149 PHE 149 130 130 PHE PHE A . n A 1 150 ALA 150 131 131 ALA ALA A . n A 1 151 GLY 151 132 132 GLY GLY A . n A 1 152 ASN 152 133 133 ASN ASN A . n A 1 153 GLU 153 134 134 GLU GLU A . n A 1 154 LEU 154 135 135 LEU LEU A . n A 1 155 VAL 155 136 136 VAL VAL A . n A 1 156 VAL 156 137 137 VAL VAL A . n A 1 157 SER 157 138 138 SER SER A . n A 1 158 GLY 158 139 139 GLY GLY A . n A 1 159 PRO 159 140 140 PRO PRO A . n A 1 160 ASN 160 141 141 ASN ASN A . n A 1 161 GLY 161 142 142 GLY GLY A . n A 1 162 THR 162 143 143 THR THR A . n A 1 163 ALA 163 144 144 ALA ALA A . n A 1 164 GLY 164 145 145 GLY GLY A . n A 1 165 ILE 165 146 146 ILE ILE A . n A 1 166 PHE 166 147 147 PHE PHE A . n A 1 167 ALA 167 148 148 ALA ALA A . n A 1 168 THR 168 149 149 THR THR A . n A 1 169 TYR 169 150 150 TYR TYR A . n A 1 170 PRO 170 151 151 PRO PRO A . n A 1 171 SER 171 152 152 SER SER A . n A 1 172 GLY 172 153 153 GLY GLY A . n A 1 173 HIS 173 154 154 HIS HIS A . n A 1 174 LEU 174 155 155 LEU LEU A . n A 1 175 ASP 175 156 156 ASP ASP A . n A 1 176 MET 176 157 157 MET MET A . n A 1 177 VAL 177 158 158 VAL VAL A . n A 1 178 ASN 178 159 159 ASN ASN A . n A 1 179 GLY 179 160 160 GLY GLY A . n A 1 180 PHE 180 161 161 PHE PHE A . n A 1 181 PHE 181 162 162 PHE PHE A . n A 1 182 ASP 182 163 163 ASP ASP A . n A 1 183 GLN 183 164 164 GLN GLN A . n A 1 184 PHE 184 165 165 PHE PHE A . n A 1 185 ILE 185 166 166 ILE ILE A . n A 1 186 GLY 186 167 167 GLY GLY A . n A 1 187 THR 187 168 168 THR THR A . n A 1 188 ALA 188 169 169 ALA ALA A . n A 1 189 ALA 189 170 170 ALA ALA A . n A 1 190 LEU 190 171 171 LEU LEU A . n A 1 191 ILE 191 172 172 ILE ILE A . n A 1 192 VAL 192 173 173 VAL VAL A . n A 1 193 CYS 193 174 174 CYS CYS A . n A 1 194 VAL 194 175 175 VAL VAL A . n A 1 195 LEU 195 176 176 LEU LEU A . n A 1 196 ALA 196 177 177 ALA ALA A . n A 1 197 ILE 197 178 178 ILE ILE A . n A 1 198 VAL 198 179 179 VAL VAL A . n A 1 199 ASP 199 180 180 ASP ASP A . n A 1 200 PRO 200 181 181 PRO PRO A . n A 1 201 TYR 201 182 182 TYR TYR A . n A 1 202 ASN 202 183 183 ASN ASN A . n A 1 203 ASN 203 184 184 ASN ASN A . n A 1 204 PRO 204 185 185 PRO PRO A . n A 1 205 VAL 205 186 186 VAL VAL A . n A 1 206 PRO 206 187 187 PRO PRO A . n A 1 207 ARG 207 188 188 ARG ARG A . n A 1 208 GLY 208 189 189 GLY GLY A . n A 1 209 LEU 209 190 190 LEU LEU A . n A 1 210 GLU 210 191 191 GLU GLU A . n A 1 211 ALA 211 192 192 ALA ALA A . n A 1 212 PHE 212 193 193 PHE PHE A . n A 1 213 THR 213 194 194 THR THR A . n A 1 214 VAL 214 195 195 VAL VAL A . n A 1 215 GLY 215 196 196 GLY GLY A . n A 1 216 LEU 216 197 197 LEU LEU A . n A 1 217 VAL 217 198 198 VAL VAL A . n A 1 218 VAL 218 199 199 VAL VAL A . n A 1 219 LEU 219 200 200 LEU LEU A . n A 1 220 VAL 220 201 201 VAL VAL A . n A 1 221 ILE 221 202 202 ILE ILE A . n A 1 222 GLY 222 203 203 GLY GLY A . n A 1 223 THR 223 204 204 THR THR A . n A 1 224 SER 224 205 205 SER SER A . n A 1 225 MET 225 206 206 MET MET A . n A 1 226 GLY 226 207 207 GLY GLY A . n A 1 227 PHE 227 208 208 PHE PHE A . n A 1 228 ASN 228 209 209 ASN ASN A . n A 1 229 SER 229 210 210 SER SER A . n A 1 230 GLY 230 211 211 GLY GLY A . n A 1 231 THR 231 212 212 THR THR A . n A 1 232 ALA 232 213 213 ALA ALA A . n A 1 233 VAL 233 214 214 VAL VAL A . n A 1 234 ASN 234 215 215 ASN ASN A . n A 1 235 PRO 235 216 216 PRO PRO A . n A 1 236 ALA 236 217 217 ALA ALA A . n A 1 237 ARG 237 218 218 ARG ARG A . n A 1 238 ASP 238 219 219 ASP ASP A . n A 1 239 PHE 239 220 220 PHE PHE A . n A 1 240 GLY 240 221 221 GLY GLY A . n A 1 241 PRO 241 222 222 PRO PRO A . n A 1 242 ARG 242 223 223 ARG ARG A . n A 1 243 LEU 243 224 224 LEU LEU A . n A 1 244 PHE 244 225 225 PHE PHE A . n A 1 245 THR 245 226 226 THR THR A . n A 1 246 ALA 246 227 227 ALA ALA A . n A 1 247 LEU 247 228 228 LEU LEU A . n A 1 248 ALA 248 229 229 ALA ALA A . n A 1 249 GLY 249 230 230 GLY GLY A . n A 1 250 TRP 250 231 231 TRP TRP A . n A 1 251 GLY 251 232 232 GLY GLY A . n A 1 252 SER 252 233 233 SER SER A . n A 1 253 GLU 253 234 234 GLU GLU A . n A 1 254 VAL 254 235 235 VAL VAL A . n A 1 255 PHE 255 236 236 PHE PHE A . n A 1 256 THR 256 237 237 THR THR A . n A 1 257 THR 257 238 238 THR THR A . n A 1 258 GLY 258 239 239 GLY GLY A . n A 1 259 GLN 259 240 240 GLN GLN A . n A 1 260 ASN 260 241 241 ASN ASN A . n A 1 261 TRP 261 242 242 TRP TRP A . n A 1 262 TRP 262 243 243 TRP TRP A . n A 1 263 TRP 263 244 244 TRP TRP A . n A 1 264 VAL 264 245 245 VAL VAL A . n A 1 265 PRO 265 246 246 PRO PRO A . n A 1 266 ILE 266 247 247 ILE ILE A . n A 1 267 VAL 267 248 248 VAL VAL A . n A 1 268 SER 268 249 249 SER SER A . n A 1 269 PRO 269 250 250 PRO PRO A . n A 1 270 LEU 270 251 251 LEU LEU A . n A 1 271 LEU 271 252 252 LEU LEU A . n A 1 272 GLY 272 253 253 GLY GLY A . n A 1 273 SER 273 254 254 SER SER A . n A 1 274 ILE 274 255 255 ILE ILE A . n A 1 275 GLY 275 256 256 GLY GLY A . n A 1 276 GLY 276 257 257 GLY GLY A . n A 1 277 VAL 277 258 258 VAL VAL A . n A 1 278 PHE 278 259 259 PHE PHE A . n A 1 279 VAL 279 260 260 VAL VAL A . n A 1 280 TYR 280 261 261 TYR TYR A . n A 1 281 GLN 281 262 262 GLN GLN A . n A 1 282 LEU 282 263 263 LEU LEU A . n A 1 283 MET 283 264 264 MET MET A . n A 1 284 ILE 284 265 265 ILE ILE A . n A 1 285 GLY 285 266 266 GLY GLY A . n A 1 286 CYS 286 267 267 CYS CYS A . n A 1 287 HIS 287 268 268 HIS HIS A . n A 1 288 LEU 288 269 269 LEU LEU A . n A 1 289 GLU 289 270 270 GLU GLU A . n A 1 290 GLN 290 271 ? ? ? A . n A 1 291 PRO 291 272 ? ? ? A . n A 1 292 PRO 292 273 ? ? ? A . n A 1 293 PRO 293 274 ? ? ? A . n A 1 294 SER 294 275 ? ? ? A . n A 1 295 THR 295 276 ? ? ? A . n A 1 296 GLU 296 277 ? ? ? A . n A 1 297 ALA 297 278 ? ? ? A . n A 1 298 GLU 298 279 ? ? ? A . n A 1 299 ASN 299 280 ? ? ? A . n A 1 300 VAL 300 281 ? ? ? A . n A 1 301 LYS 301 282 ? ? ? A . n A 1 302 LEU 302 283 ? ? ? A . n A 1 303 ALA 303 284 ? ? ? A . n A 1 304 HIS 304 285 ? ? ? A . n A 1 305 MET 305 286 ? ? ? A . n A 1 306 LYS 306 287 ? ? ? A . n A 1 307 HIS 307 288 ? ? ? A . n A 1 308 LYS 308 289 ? ? ? A . n A 1 309 GLU 309 290 ? ? ? A . n A 1 310 GLN 310 291 ? ? ? A . n A 1 311 ILE 311 292 ? ? ? A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id LMT _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id LMT _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id LMT _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 301 _pdbx_nonpoly_scheme.auth_seq_num 301 _pdbx_nonpoly_scheme.pdb_mon_id LMT _pdbx_nonpoly_scheme.auth_mon_id LMT _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8Y8R _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8Y8R _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8Y8R _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8Y8R _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 8396 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.458 ? 11452 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 5.570 ? 1382 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.036 ? 1336 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 1424 ? f_plane_restr ? ? # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 2 generate ? 0.000000 -1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 194.97000 0.00000 0.00000 3 generate ? -1.000000 -0.000000 0.000000 0.000000 -1.000000 0.000000 0.000000 0.000000 1.000000 194.97000 194.97000 0.00000 4 generate ? -0.000000 1.000000 0.000000 -1.000000 -0.000000 0.000000 0.000000 0.000000 1.000000 0.00000 194.97000 0.00000 # _struct.entry_id 8Y8R _struct.title 'Cryo-EM structure of AQP3 Y212T in DDM micelle' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8Y8R _struct_keywords.text 'water channel, aquaporin, aquaglyceroporin, glycerol, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code AQP3_RAT _struct_ref.pdbx_db_accession P47862 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGRQKELMNRCGEMLHIRYRLLRQALAECLGTLILVMFGCGSVAQVVLSRGTHGGFLTINLAFGFAVTLAILVAGQVSGA HLNPAVTFAMCFLAREPWIKLPIYTLAQTLGAFLGAGIVFGLYYDAIWAFAGNELVVSGPNGTAGIFATYPSGHLDMVNG FFDQFIGTAALIVCVLAIVDPYNNPVPRGLEAFTVGLVVLVIGTSMGFNSGYAVNPARDFGPRLFTALAGWGSEVFTTGQ NWWWVPIVSPLLGSIGGVFVYQLMIGCHLEQPPPSTEAENVKLAHMKHKEQI ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8Y8R _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 311 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P47862 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 292 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 292 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8Y8R MET A 1 ? UNP P47862 ? ? 'initiating methionine' -18 1 1 8Y8R HIS A 2 ? UNP P47862 ? ? 'expression tag' -17 2 1 8Y8R HIS A 3 ? UNP P47862 ? ? 'expression tag' -16 3 1 8Y8R HIS A 4 ? UNP P47862 ? ? 'expression tag' -15 4 1 8Y8R HIS A 5 ? UNP P47862 ? ? 'expression tag' -14 5 1 8Y8R HIS A 6 ? UNP P47862 ? ? 'expression tag' -13 6 1 8Y8R HIS A 7 ? UNP P47862 ? ? 'expression tag' -12 7 1 8Y8R HIS A 8 ? UNP P47862 ? ? 'expression tag' -11 8 1 8Y8R HIS A 9 ? UNP P47862 ? ? 'expression tag' -10 9 1 8Y8R ALA A 10 ? UNP P47862 ? ? 'expression tag' -9 10 1 8Y8R ALA A 11 ? UNP P47862 ? ? 'expression tag' -8 11 1 8Y8R ALA A 12 ? UNP P47862 ? ? 'expression tag' -7 12 1 8Y8R GLY A 13 ? UNP P47862 ? ? 'expression tag' -6 13 1 8Y8R LEU A 14 ? UNP P47862 ? ? 'expression tag' -5 14 1 8Y8R VAL A 15 ? UNP P47862 ? ? 'expression tag' -4 15 1 8Y8R PRO A 16 ? UNP P47862 ? ? 'expression tag' -3 16 1 8Y8R ARG A 17 ? UNP P47862 ? ? 'expression tag' -2 17 1 8Y8R GLY A 18 ? UNP P47862 ? ? 'expression tag' -1 18 1 8Y8R SER A 19 ? UNP P47862 ? ? 'expression tag' 0 19 1 8Y8R THR A 231 ? UNP P47862 TYR 212 'engineered mutation' 212 20 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete point assembly' ? tetrameric 4 2 'point asymmetric unit' ? monomeric 1 3 'point asymmetric unit, std point frame' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-4)' A,B 2 1 A,B 3 P A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? -0.82775381 -0.56109147 0.00000000 135.39158 0.56109147 -0.82775381 0.00000000 25.99558 0.00000000 0.00000000 1.00000000 -86.74455 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.00000000 -1.00000000 0.00000000 194.97000 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 3 'point symmetry operation' ? ? -1.00000000 0.00000000 0.00000000 194.96999 0.00000000 -1.00000000 0.00000000 194.97000 0.00000000 0.00000000 1.00000000 0.00000 4 'point symmetry operation' ? ? 0.00000000 1.00000000 0.00000000 0.00000 -1.00000000 0.00000000 0.00000000 194.97000 0.00000000 0.00000000 1.00000000 0.00000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 23 ? LEU A 34 ? GLN A 4 LEU A 15 1 ? 12 HELX_P HELX_P2 AA2 TYR A 38 ? SER A 68 ? TYR A 19 SER A 49 1 ? 31 HELX_P HELX_P3 AA3 GLY A 74 ? GLY A 94 ? GLY A 55 GLY A 75 1 ? 21 HELX_P HELX_P4 AA4 ASN A 102 ? LEU A 112 ? ASN A 83 LEU A 93 1 ? 11 HELX_P HELX_P5 AA5 PRO A 116 ? ILE A 118 ? PRO A 97 ILE A 99 5 ? 3 HELX_P HELX_P6 AA6 LYS A 119 ? TYR A 142 ? LYS A 100 TYR A 123 1 ? 24 HELX_P HELX_P7 AA7 TYR A 142 ? ALA A 150 ? TYR A 123 ALA A 131 1 ? 9 HELX_P HELX_P8 AA8 THR A 162 ? PHE A 166 ? THR A 143 PHE A 147 5 ? 5 HELX_P HELX_P9 AA9 ASP A 175 ? ASP A 199 ? ASP A 156 ASP A 180 1 ? 25 HELX_P HELX_P10 AB1 LEU A 209 ? GLY A 226 ? LEU A 190 GLY A 207 1 ? 18 HELX_P HELX_P11 AB2 ASN A 234 ? ALA A 248 ? ASN A 215 ALA A 229 1 ? 15 HELX_P HELX_P12 AB3 SER A 252 ? THR A 257 ? SER A 233 THR A 238 1 ? 6 HELX_P HELX_P13 AB4 ASN A 260 ? TRP A 262 ? ASN A 241 TRP A 243 5 ? 3 HELX_P HELX_P14 AB5 TRP A 263 ? LEU A 282 ? TRP A 244 LEU A 263 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_entry_details.entry_id 8Y8R _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 53 ? ? -96.49 31.08 2 1 LEU A 82 ? ? 58.76 11.34 3 1 ALA A 94 ? ? 58.07 16.86 4 1 ALA A 213 ? ? -97.78 -64.29 5 1 VAL A 214 ? ? 33.70 28.90 # _pdbx_point_symmetry.entry_id 8Y8R _pdbx_point_symmetry.Schoenflies_symbol C _pdbx_point_symmetry.circular_symmetry 4 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8Y8R _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8Y8R _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.39 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 54899 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Tetramer of AQP3 Y212T in DDM micelle' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8Y8R _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'JEOL CRYO ARM 300' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8Y8R _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8Y8R _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8Y8R _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -18 ? A MET 1 2 1 Y 1 A HIS -17 ? A HIS 2 3 1 Y 1 A HIS -16 ? A HIS 3 4 1 Y 1 A HIS -15 ? A HIS 4 5 1 Y 1 A HIS -14 ? A HIS 5 6 1 Y 1 A HIS -13 ? A HIS 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 10 1 Y 1 A ALA -9 ? A ALA 10 11 1 Y 1 A ALA -8 ? A ALA 11 12 1 Y 1 A ALA -7 ? A ALA 12 13 1 Y 1 A GLY -6 ? A GLY 13 14 1 Y 1 A LEU -5 ? A LEU 14 15 1 Y 1 A VAL -4 ? A VAL 15 16 1 Y 1 A PRO -3 ? A PRO 16 17 1 Y 1 A ARG -2 ? A ARG 17 18 1 Y 1 A GLY -1 ? A GLY 18 19 1 Y 1 A SER 0 ? A SER 19 20 1 Y 1 A MET 1 ? A MET 20 21 1 Y 1 A GLY 2 ? A GLY 21 22 1 Y 1 A ARG 3 ? A ARG 22 23 1 Y 1 A GLN 271 ? A GLN 290 24 1 Y 1 A PRO 272 ? A PRO 291 25 1 Y 1 A PRO 273 ? A PRO 292 26 1 Y 1 A PRO 274 ? A PRO 293 27 1 Y 1 A SER 275 ? A SER 294 28 1 Y 1 A THR 276 ? A THR 295 29 1 Y 1 A GLU 277 ? A GLU 296 30 1 Y 1 A ALA 278 ? A ALA 297 31 1 Y 1 A GLU 279 ? A GLU 298 32 1 Y 1 A ASN 280 ? A ASN 299 33 1 Y 1 A VAL 281 ? A VAL 300 34 1 Y 1 A LYS 282 ? A LYS 301 35 1 Y 1 A LEU 283 ? A LEU 302 36 1 Y 1 A ALA 284 ? A ALA 303 37 1 Y 1 A HIS 285 ? A HIS 304 38 1 Y 1 A MET 286 ? A MET 305 39 1 Y 1 A LYS 287 ? A LYS 306 40 1 Y 1 A HIS 288 ? A HIS 307 41 1 Y 1 A LYS 289 ? A LYS 308 42 1 Y 1 A GLU 290 ? A GLU 309 43 1 Y 1 A GLN 291 ? A GLN 310 44 1 Y 1 A ILE 292 ? A ILE 311 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LMT C1B C N R 202 LMT C2B C N R 203 LMT C3B C N S 204 LMT C4B C N S 205 LMT C5B C N R 206 LMT C6B C N N 207 LMT O1B O N N 208 LMT O2B O N N 209 LMT O3B O N N 210 LMT "O4'" O N N 211 LMT O5B O N N 212 LMT O6B O N N 213 LMT "C1'" C N R 214 LMT "C2'" C N R 215 LMT "C3'" C N R 216 LMT "C4'" C N S 217 LMT "C5'" C N R 218 LMT "C6'" C N N 219 LMT "O1'" O N N 220 LMT "O2'" O N N 221 LMT "O3'" O N N 222 LMT "O5'" O N N 223 LMT "O6'" O N N 224 LMT C1 C N N 225 LMT C2 C N N 226 LMT C3 C N N 227 LMT C4 C N N 228 LMT C5 C N N 229 LMT C6 C N N 230 LMT C7 C N N 231 LMT C8 C N N 232 LMT C9 C N N 233 LMT C10 C N N 234 LMT C11 C N N 235 LMT C12 C N N 236 LMT H1B H N N 237 LMT H2B H N N 238 LMT H3B H N N 239 LMT H4B H N N 240 LMT H5B H N N 241 LMT "H6'2" H N N 242 LMT "H6'1" H N N 243 LMT H2O1 H N N 244 LMT H3O1 H N N 245 LMT H4O1 H N N 246 LMT H6B H N N 247 LMT "H1'" H N N 248 LMT "H2'" H N N 249 LMT "H3'" H N N 250 LMT "H4'" H N N 251 LMT "H5'" H N N 252 LMT H6D H N N 253 LMT H6E H N N 254 LMT H2O2 H N N 255 LMT H3O2 H N N 256 LMT "H6'" H N N 257 LMT H12 H N N 258 LMT H11 H N N 259 LMT H22 H N N 260 LMT H21 H N N 261 LMT H32 H N N 262 LMT H31 H N N 263 LMT H42 H N N 264 LMT H41 H N N 265 LMT H52 H N N 266 LMT H51 H N N 267 LMT H62 H N N 268 LMT H61 H N N 269 LMT H72 H N N 270 LMT H71 H N N 271 LMT H82 H N N 272 LMT H81 H N N 273 LMT H92 H N N 274 LMT H91 H N N 275 LMT H102 H N N 276 LMT H101 H N N 277 LMT H112 H N N 278 LMT H111 H N N 279 LMT H123 H N N 280 LMT H122 H N N 281 LMT H121 H N N 282 LYS N N N N 283 LYS CA C N S 284 LYS C C N N 285 LYS O O N N 286 LYS CB C N N 287 LYS CG C N N 288 LYS CD C N N 289 LYS CE C N N 290 LYS NZ N N N 291 LYS OXT O N N 292 LYS H H N N 293 LYS H2 H N N 294 LYS HA H N N 295 LYS HB2 H N N 296 LYS HB3 H N N 297 LYS HG2 H N N 298 LYS HG3 H N N 299 LYS HD2 H N N 300 LYS HD3 H N N 301 LYS HE2 H N N 302 LYS HE3 H N N 303 LYS HZ1 H N N 304 LYS HZ2 H N N 305 LYS HZ3 H N N 306 LYS HXT H N N 307 MET N N N N 308 MET CA C N S 309 MET C C N N 310 MET O O N N 311 MET CB C N N 312 MET CG C N N 313 MET SD S N N 314 MET CE C N N 315 MET OXT O N N 316 MET H H N N 317 MET H2 H N N 318 MET HA H N N 319 MET HB2 H N N 320 MET HB3 H N N 321 MET HG2 H N N 322 MET HG3 H N N 323 MET HE1 H N N 324 MET HE2 H N N 325 MET HE3 H N N 326 MET HXT H N N 327 PHE N N N N 328 PHE CA C N S 329 PHE C C N N 330 PHE O O N N 331 PHE CB C N N 332 PHE CG C Y N 333 PHE CD1 C Y N 334 PHE CD2 C Y N 335 PHE CE1 C Y N 336 PHE CE2 C Y N 337 PHE CZ C Y N 338 PHE OXT O N N 339 PHE H H N N 340 PHE H2 H N N 341 PHE HA H N N 342 PHE HB2 H N N 343 PHE HB3 H N N 344 PHE HD1 H N N 345 PHE HD2 H N N 346 PHE HE1 H N N 347 PHE HE2 H N N 348 PHE HZ H N N 349 PHE HXT H N N 350 PRO N N N N 351 PRO CA C N S 352 PRO C C N N 353 PRO O O N N 354 PRO CB C N N 355 PRO CG C N N 356 PRO CD C N N 357 PRO OXT O N N 358 PRO H H N N 359 PRO HA H N N 360 PRO HB2 H N N 361 PRO HB3 H N N 362 PRO HG2 H N N 363 PRO HG3 H N N 364 PRO HD2 H N N 365 PRO HD3 H N N 366 PRO HXT H N N 367 SER N N N N 368 SER CA C N S 369 SER C C N N 370 SER O O N N 371 SER CB C N N 372 SER OG O N N 373 SER OXT O N N 374 SER H H N N 375 SER H2 H N N 376 SER HA H N N 377 SER HB2 H N N 378 SER HB3 H N N 379 SER HG H N N 380 SER HXT H N N 381 THR N N N N 382 THR CA C N S 383 THR C C N N 384 THR O O N N 385 THR CB C N R 386 THR OG1 O N N 387 THR CG2 C N N 388 THR OXT O N N 389 THR H H N N 390 THR H2 H N N 391 THR HA H N N 392 THR HB H N N 393 THR HG1 H N N 394 THR HG21 H N N 395 THR HG22 H N N 396 THR HG23 H N N 397 THR HXT H N N 398 TRP N N N N 399 TRP CA C N S 400 TRP C C N N 401 TRP O O N N 402 TRP CB C N N 403 TRP CG C Y N 404 TRP CD1 C Y N 405 TRP CD2 C Y N 406 TRP NE1 N Y N 407 TRP CE2 C Y N 408 TRP CE3 C Y N 409 TRP CZ2 C Y N 410 TRP CZ3 C Y N 411 TRP CH2 C Y N 412 TRP OXT O N N 413 TRP H H N N 414 TRP H2 H N N 415 TRP HA H N N 416 TRP HB2 H N N 417 TRP HB3 H N N 418 TRP HD1 H N N 419 TRP HE1 H N N 420 TRP HE3 H N N 421 TRP HZ2 H N N 422 TRP HZ3 H N N 423 TRP HH2 H N N 424 TRP HXT H N N 425 TYR N N N N 426 TYR CA C N S 427 TYR C C N N 428 TYR O O N N 429 TYR CB C N N 430 TYR CG C Y N 431 TYR CD1 C Y N 432 TYR CD2 C Y N 433 TYR CE1 C Y N 434 TYR CE2 C Y N 435 TYR CZ C Y N 436 TYR OH O N N 437 TYR OXT O N N 438 TYR H H N N 439 TYR H2 H N N 440 TYR HA H N N 441 TYR HB2 H N N 442 TYR HB3 H N N 443 TYR HD1 H N N 444 TYR HD2 H N N 445 TYR HE1 H N N 446 TYR HE2 H N N 447 TYR HH H N N 448 TYR HXT H N N 449 VAL N N N N 450 VAL CA C N S 451 VAL C C N N 452 VAL O O N N 453 VAL CB C N N 454 VAL CG1 C N N 455 VAL CG2 C N N 456 VAL OXT O N N 457 VAL H H N N 458 VAL H2 H N N 459 VAL HA H N N 460 VAL HB H N N 461 VAL HG11 H N N 462 VAL HG12 H N N 463 VAL HG13 H N N 464 VAL HG21 H N N 465 VAL HG22 H N N 466 VAL HG23 H N N 467 VAL HXT H N N 468 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LMT C1B C2B sing N N 192 LMT C1B O1B sing N N 193 LMT C1B O5B sing N N 194 LMT C1B H1B sing N N 195 LMT C2B C3B sing N N 196 LMT C2B O2B sing N N 197 LMT C2B H2B sing N N 198 LMT C3B C4B sing N N 199 LMT C3B O3B sing N N 200 LMT C3B H3B sing N N 201 LMT C4B C5B sing N N 202 LMT C4B "O4'" sing N N 203 LMT C4B H4B sing N N 204 LMT C5B C6B sing N N 205 LMT C5B O5B sing N N 206 LMT C5B H5B sing N N 207 LMT C6B O6B sing N N 208 LMT C6B "H6'2" sing N N 209 LMT C6B "H6'1" sing N N 210 LMT O1B "C4'" sing N N 211 LMT O2B H2O1 sing N N 212 LMT O3B H3O1 sing N N 213 LMT "O4'" H4O1 sing N N 214 LMT O6B H6B sing N N 215 LMT "C1'" "C2'" sing N N 216 LMT "C1'" "O1'" sing N N 217 LMT "C1'" "O5'" sing N N 218 LMT "C1'" "H1'" sing N N 219 LMT "C2'" "C3'" sing N N 220 LMT "C2'" "O2'" sing N N 221 LMT "C2'" "H2'" sing N N 222 LMT "C3'" "C4'" sing N N 223 LMT "C3'" "O3'" sing N N 224 LMT "C3'" "H3'" sing N N 225 LMT "C4'" "C5'" sing N N 226 LMT "C4'" "H4'" sing N N 227 LMT "C5'" "C6'" sing N N 228 LMT "C5'" "O5'" sing N N 229 LMT "C5'" "H5'" sing N N 230 LMT "C6'" "O6'" sing N N 231 LMT "C6'" H6D sing N N 232 LMT "C6'" H6E sing N N 233 LMT "O1'" C1 sing N N 234 LMT "O2'" H2O2 sing N N 235 LMT "O3'" H3O2 sing N N 236 LMT "O6'" "H6'" sing N N 237 LMT C1 C2 sing N N 238 LMT C1 H12 sing N N 239 LMT C1 H11 sing N N 240 LMT C2 C3 sing N N 241 LMT C2 H22 sing N N 242 LMT C2 H21 sing N N 243 LMT C3 C4 sing N N 244 LMT C3 H32 sing N N 245 LMT C3 H31 sing N N 246 LMT C4 C5 sing N N 247 LMT C4 H42 sing N N 248 LMT C4 H41 sing N N 249 LMT C5 C6 sing N N 250 LMT C5 H52 sing N N 251 LMT C5 H51 sing N N 252 LMT C6 C7 sing N N 253 LMT C6 H62 sing N N 254 LMT C6 H61 sing N N 255 LMT C7 C8 sing N N 256 LMT C7 H72 sing N N 257 LMT C7 H71 sing N N 258 LMT C8 C9 sing N N 259 LMT C8 H82 sing N N 260 LMT C8 H81 sing N N 261 LMT C9 C10 sing N N 262 LMT C9 H92 sing N N 263 LMT C9 H91 sing N N 264 LMT C10 C11 sing N N 265 LMT C10 H102 sing N N 266 LMT C10 H101 sing N N 267 LMT C11 C12 sing N N 268 LMT C11 H112 sing N N 269 LMT C11 H111 sing N N 270 LMT C12 H123 sing N N 271 LMT C12 H122 sing N N 272 LMT C12 H121 sing N N 273 LYS N CA sing N N 274 LYS N H sing N N 275 LYS N H2 sing N N 276 LYS CA C sing N N 277 LYS CA CB sing N N 278 LYS CA HA sing N N 279 LYS C O doub N N 280 LYS C OXT sing N N 281 LYS CB CG sing N N 282 LYS CB HB2 sing N N 283 LYS CB HB3 sing N N 284 LYS CG CD sing N N 285 LYS CG HG2 sing N N 286 LYS CG HG3 sing N N 287 LYS CD CE sing N N 288 LYS CD HD2 sing N N 289 LYS CD HD3 sing N N 290 LYS CE NZ sing N N 291 LYS CE HE2 sing N N 292 LYS CE HE3 sing N N 293 LYS NZ HZ1 sing N N 294 LYS NZ HZ2 sing N N 295 LYS NZ HZ3 sing N N 296 LYS OXT HXT sing N N 297 MET N CA sing N N 298 MET N H sing N N 299 MET N H2 sing N N 300 MET CA C sing N N 301 MET CA CB sing N N 302 MET CA HA sing N N 303 MET C O doub N N 304 MET C OXT sing N N 305 MET CB CG sing N N 306 MET CB HB2 sing N N 307 MET CB HB3 sing N N 308 MET CG SD sing N N 309 MET CG HG2 sing N N 310 MET CG HG3 sing N N 311 MET SD CE sing N N 312 MET CE HE1 sing N N 313 MET CE HE2 sing N N 314 MET CE HE3 sing N N 315 MET OXT HXT sing N N 316 PHE N CA sing N N 317 PHE N H sing N N 318 PHE N H2 sing N N 319 PHE CA C sing N N 320 PHE CA CB sing N N 321 PHE CA HA sing N N 322 PHE C O doub N N 323 PHE C OXT sing N N 324 PHE CB CG sing N N 325 PHE CB HB2 sing N N 326 PHE CB HB3 sing N N 327 PHE CG CD1 doub Y N 328 PHE CG CD2 sing Y N 329 PHE CD1 CE1 sing Y N 330 PHE CD1 HD1 sing N N 331 PHE CD2 CE2 doub Y N 332 PHE CD2 HD2 sing N N 333 PHE CE1 CZ doub Y N 334 PHE CE1 HE1 sing N N 335 PHE CE2 CZ sing Y N 336 PHE CE2 HE2 sing N N 337 PHE CZ HZ sing N N 338 PHE OXT HXT sing N N 339 PRO N CA sing N N 340 PRO N CD sing N N 341 PRO N H sing N N 342 PRO CA C sing N N 343 PRO CA CB sing N N 344 PRO CA HA sing N N 345 PRO C O doub N N 346 PRO C OXT sing N N 347 PRO CB CG sing N N 348 PRO CB HB2 sing N N 349 PRO CB HB3 sing N N 350 PRO CG CD sing N N 351 PRO CG HG2 sing N N 352 PRO CG HG3 sing N N 353 PRO CD HD2 sing N N 354 PRO CD HD3 sing N N 355 PRO OXT HXT sing N N 356 SER N CA sing N N 357 SER N H sing N N 358 SER N H2 sing N N 359 SER CA C sing N N 360 SER CA CB sing N N 361 SER CA HA sing N N 362 SER C O doub N N 363 SER C OXT sing N N 364 SER CB OG sing N N 365 SER CB HB2 sing N N 366 SER CB HB3 sing N N 367 SER OG HG sing N N 368 SER OXT HXT sing N N 369 THR N CA sing N N 370 THR N H sing N N 371 THR N H2 sing N N 372 THR CA C sing N N 373 THR CA CB sing N N 374 THR CA HA sing N N 375 THR C O doub N N 376 THR C OXT sing N N 377 THR CB OG1 sing N N 378 THR CB CG2 sing N N 379 THR CB HB sing N N 380 THR OG1 HG1 sing N N 381 THR CG2 HG21 sing N N 382 THR CG2 HG22 sing N N 383 THR CG2 HG23 sing N N 384 THR OXT HXT sing N N 385 TRP N CA sing N N 386 TRP N H sing N N 387 TRP N H2 sing N N 388 TRP CA C sing N N 389 TRP CA CB sing N N 390 TRP CA HA sing N N 391 TRP C O doub N N 392 TRP C OXT sing N N 393 TRP CB CG sing N N 394 TRP CB HB2 sing N N 395 TRP CB HB3 sing N N 396 TRP CG CD1 doub Y N 397 TRP CG CD2 sing Y N 398 TRP CD1 NE1 sing Y N 399 TRP CD1 HD1 sing N N 400 TRP CD2 CE2 doub Y N 401 TRP CD2 CE3 sing Y N 402 TRP NE1 CE2 sing Y N 403 TRP NE1 HE1 sing N N 404 TRP CE2 CZ2 sing Y N 405 TRP CE3 CZ3 doub Y N 406 TRP CE3 HE3 sing N N 407 TRP CZ2 CH2 doub Y N 408 TRP CZ2 HZ2 sing N N 409 TRP CZ3 CH2 sing Y N 410 TRP CZ3 HZ3 sing N N 411 TRP CH2 HH2 sing N N 412 TRP OXT HXT sing N N 413 TYR N CA sing N N 414 TYR N H sing N N 415 TYR N H2 sing N N 416 TYR CA C sing N N 417 TYR CA CB sing N N 418 TYR CA HA sing N N 419 TYR C O doub N N 420 TYR C OXT sing N N 421 TYR CB CG sing N N 422 TYR CB HB2 sing N N 423 TYR CB HB3 sing N N 424 TYR CG CD1 doub Y N 425 TYR CG CD2 sing Y N 426 TYR CD1 CE1 sing Y N 427 TYR CD1 HD1 sing N N 428 TYR CD2 CE2 doub Y N 429 TYR CD2 HD2 sing N N 430 TYR CE1 CZ doub Y N 431 TYR CE1 HE1 sing N N 432 TYR CE2 CZ sing Y N 433 TYR CE2 HE2 sing N N 434 TYR CZ OH sing N N 435 TYR OH HH sing N N 436 TYR OXT HXT sing N N 437 VAL N CA sing N N 438 VAL N H sing N N 439 VAL N H2 sing N N 440 VAL CA C sing N N 441 VAL CA CB sing N N 442 VAL CA HA sing N N 443 VAL C O doub N N 444 VAL C OXT sing N N 445 VAL CB CG1 sing N N 446 VAL CB CG2 sing N N 447 VAL CB HB sing N N 448 VAL CG1 HG11 sing N N 449 VAL CG1 HG12 sing N N 450 VAL CG1 HG13 sing N N 451 VAL CG2 HG21 sing N N 452 VAL CG2 HG22 sing N N 453 VAL CG2 HG23 sing N N 454 VAL OXT HXT sing N N 455 # _em_admin.current_status REL _em_admin.deposition_date 2024-02-06 _em_admin.deposition_site PDBJ _em_admin.entry_id 8Y8R _em_admin.last_update 2025-07-02 _em_admin.map_release_date 2025-03-19 _em_admin.title 'Cryo-EM structure of AQP3 Y212T in DDM micelle' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 10116 _em_entity_assembly_naturalsource.organism 'Rattus norvegicus' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 7108 _em_entity_assembly_recombinant.organism 'Spodoptera frugiperda' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 63.4 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? PHENIX ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 20H00451 1 'Japan Agency for Medical Research and Development (AMED)' Japan JP21ae0121028 2 # _atom_sites.entry_id 8Y8R _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #