HEADER HYDROLASE 17-FEB-24 8YC1 TITLE ACID PHOSPHATE HYDROLASE FROM SHIGELLA FLEXNERI (APO) CAVEAT 8YC1 THR C 169 HAS WRONG CHIRALITY AT ATOM CB COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACID PHOSPHATASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 3.1.3.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHIGELLA FLEXNERI; SOURCE 3 ORGANISM_TAXID: 623; SOURCE 4 GENE: PHON; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS APO, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR W.Y.DU,X.M.PAN,L.B.DONG REVDAT 2 26-NOV-25 8YC1 1 JRNL REVDAT 1 19-FEB-25 8YC1 0 JRNL AUTH W.DU,Z.CHENG,X.PAN,C.LIU,M.YUE,T.LI,Z.XIAO,L.L.LI,X.ZENG, JRNL AUTH 2 X.LIN,F.LI,L.B.DONG JRNL TITL MICROBE ENGINEERING TO PROVIDE DRIMANE-TYPE BUILDING BLOCKS JRNL TITL 2 FOR CHIRAL POOL SYNTHESIS OF MEROTERPENOIDS. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 64 19463 2025 JRNL REFN ESSN 1521-3773 JRNL PMID 39714334 JRNL DOI 10.1002/ANIE.202419463 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.18.1_3865: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 22920 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.720 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.0300 - 6.5000 1.00 1601 155 0.1622 0.1907 REMARK 3 2 6.5000 - 5.1600 1.00 1527 147 0.2052 0.2273 REMARK 3 3 5.1600 - 4.5100 1.00 1499 146 0.1675 0.1800 REMARK 3 4 4.5100 - 4.1000 1.00 1515 138 0.1692 0.2088 REMARK 3 5 4.1000 - 3.8100 1.00 1480 144 0.1831 0.2365 REMARK 3 6 3.8000 - 3.5800 1.00 1504 144 0.2008 0.2396 REMARK 3 7 3.5800 - 3.4000 1.00 1475 145 0.1963 0.2768 REMARK 3 8 3.4000 - 3.2500 1.00 1488 140 0.2224 0.3003 REMARK 3 9 3.2500 - 3.1300 1.00 1486 139 0.2271 0.3029 REMARK 3 10 3.1300 - 3.0200 1.00 1457 137 0.2402 0.3096 REMARK 3 11 3.0200 - 2.9300 1.00 1489 143 0.2340 0.3076 REMARK 3 12 2.9300 - 2.8400 1.00 1450 141 0.2437 0.3511 REMARK 3 13 2.8400 - 2.7700 1.00 1471 139 0.2398 0.3126 REMARK 3 14 2.7700 - 2.7000 1.00 1479 141 0.2547 0.3159 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 5296 REMARK 3 ANGLE : 1.425 7188 REMARK 3 CHIRALITY : 0.107 798 REMARK 3 PLANARITY : 0.009 949 REMARK 3 DIHEDRAL : 18.973 1953 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8YC1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1300044814. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAY-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22925 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 41.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.03683 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE TRIHYDRATE, 0.2M REMARK 280 MAGNESIUM FORMATE DIHYDRATE, 18% PEG 4000, PH 4.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.01667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 96.03333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 96.03333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 48.01667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -31 REMARK 465 HIS A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 SER A -25 REMARK 465 SER A -24 REMARK 465 GLY A -23 REMARK 465 LEU A -22 REMARK 465 VAL A -21 REMARK 465 PRO A -20 REMARK 465 ARG A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 MET A -15 REMARK 465 ALA A -14 REMARK 465 SER A -13 REMARK 465 MET A -12 REMARK 465 THR A -11 REMARK 465 GLY A -10 REMARK 465 GLY A -9 REMARK 465 GLN A -8 REMARK 465 GLN A -7 REMARK 465 MET A -6 REMARK 465 GLY A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 GLU A -1 REMARK 465 PHE A 0 REMARK 465 HIS B -31 REMARK 465 HIS B -30 REMARK 465 HIS B -29 REMARK 465 HIS B -28 REMARK 465 HIS B -27 REMARK 465 HIS B -26 REMARK 465 SER B -25 REMARK 465 SER B -24 REMARK 465 GLY B -23 REMARK 465 LEU B -22 REMARK 465 VAL B -21 REMARK 465 PRO B -20 REMARK 465 ARG B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 MET B -15 REMARK 465 ALA B -14 REMARK 465 SER B -13 REMARK 465 MET B -12 REMARK 465 THR B -11 REMARK 465 GLY B -10 REMARK 465 GLY B -9 REMARK 465 GLN B -8 REMARK 465 GLN B -7 REMARK 465 MET B -6 REMARK 465 GLY B -5 REMARK 465 ARG B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 GLU B -1 REMARK 465 PHE B 0 REMARK 465 SER B 1 REMARK 465 LYS B 228 REMARK 465 LYS B 229 REMARK 465 HIS C -31 REMARK 465 HIS C -30 REMARK 465 HIS C -29 REMARK 465 HIS C -28 REMARK 465 HIS C -27 REMARK 465 HIS C -26 REMARK 465 SER C -25 REMARK 465 SER C -24 REMARK 465 GLY C -23 REMARK 465 LEU C -22 REMARK 465 VAL C -21 REMARK 465 PRO C -20 REMARK 465 ARG C -19 REMARK 465 GLY C -18 REMARK 465 SER C -17 REMARK 465 HIS C -16 REMARK 465 MET C -15 REMARK 465 ALA C -14 REMARK 465 SER C -13 REMARK 465 MET C -12 REMARK 465 THR C -11 REMARK 465 GLY C -10 REMARK 465 GLY C -9 REMARK 465 GLN C -8 REMARK 465 GLN C -7 REMARK 465 MET C -6 REMARK 465 GLY C -5 REMARK 465 ARG C -4 REMARK 465 GLY C -3 REMARK 465 SER C -2 REMARK 465 GLU C -1 REMARK 465 PHE C 0 REMARK 465 SER C 1 REMARK 465 ILE C 2 REMARK 465 PRO C 3 REMARK 465 PRO C 4 REMARK 465 ASN C 226 REMARK 465 GLN C 227 REMARK 465 LYS C 228 REMARK 465 LYS C 229 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 130 CA - CB - SG ANGL. DEV. = 20.3 DEGREES REMARK 500 CYS A 184 CA - CB - SG ANGL. DEV. = 6.6 DEGREES REMARK 500 GLY B 71 N - CA - C ANGL. DEV. = -23.8 DEGREES REMARK 500 CYS B 130 CA - CB - SG ANGL. DEV. = 10.3 DEGREES REMARK 500 ARG C 102 CB - CG - CD ANGL. DEV. = -16.6 DEGREES REMARK 500 CYS C 130 CA - CB - SG ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP C 136 CB - CA - C ANGL. DEV. = 13.0 DEGREES REMARK 500 THR C 169 OG1 - CB - CG2 ANGL. DEV. = 14.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 7 -157.17 -154.77 REMARK 500 ASN A 55 33.43 -98.63 REMARK 500 LEU A 68 115.15 -39.98 REMARK 500 SER A 69 -176.46 -65.00 REMARK 500 MET A 117 57.02 33.95 REMARK 500 ASP B 7 -156.43 -150.88 REMARK 500 SER B 69 -173.15 -66.73 REMARK 500 MET B 117 54.78 31.16 REMARK 500 ASN B 131 89.91 -151.58 REMARK 500 ASN C 55 47.26 -100.42 REMARK 500 LEU C 68 116.97 -39.66 REMARK 500 SER C 69 -175.04 -64.16 REMARK 500 MET C 117 57.40 32.59 REMARK 500 GLN C 135 -60.09 -96.65 REMARK 500 HIS C 148 -74.88 -24.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS C 133 GLU C 134 -143.06 REMARK 500 GLY C 147 HIS C 148 149.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR B 186 0.06 SIDE CHAIN REMARK 500 ASN C 6 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 8YC1 A 1 229 UNP O50542 O50542_SHIFL 21 249 DBREF 8YC1 B 1 229 UNP O50542 O50542_SHIFL 21 249 DBREF 8YC1 C 1 229 UNP O50542 O50542_SHIFL 21 249 SEQADV 8YC1 HIS A -31 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS A -30 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS A -29 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS A -28 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS A -27 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS A -26 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER A -25 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER A -24 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY A -23 UNP O50542 EXPRESSION TAG SEQADV 8YC1 LEU A -22 UNP O50542 EXPRESSION TAG SEQADV 8YC1 VAL A -21 UNP O50542 EXPRESSION TAG SEQADV 8YC1 PRO A -20 UNP O50542 EXPRESSION TAG SEQADV 8YC1 ARG A -19 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY A -18 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER A -17 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS A -16 UNP O50542 EXPRESSION TAG SEQADV 8YC1 MET A -15 UNP O50542 EXPRESSION TAG SEQADV 8YC1 ALA A -14 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER A -13 UNP O50542 EXPRESSION TAG SEQADV 8YC1 MET A -12 UNP O50542 EXPRESSION TAG SEQADV 8YC1 THR A -11 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY A -10 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY A -9 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLN A -8 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLN A -7 UNP O50542 EXPRESSION TAG SEQADV 8YC1 MET A -6 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY A -5 UNP O50542 EXPRESSION TAG SEQADV 8YC1 ARG A -4 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY A -3 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER A -2 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLU A -1 UNP O50542 EXPRESSION TAG SEQADV 8YC1 PHE A 0 UNP O50542 EXPRESSION TAG SEQADV 8YC1 ARG A 102 UNP O50542 GLU 122 CONFLICT SEQADV 8YC1 LYS A 137 UNP O50542 THR 157 CONFLICT SEQADV 8YC1 LYS A 140 UNP O50542 ARG 160 CONFLICT SEQADV 8YC1 HIS B -31 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS B -30 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS B -29 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS B -28 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS B -27 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS B -26 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER B -25 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER B -24 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY B -23 UNP O50542 EXPRESSION TAG SEQADV 8YC1 LEU B -22 UNP O50542 EXPRESSION TAG SEQADV 8YC1 VAL B -21 UNP O50542 EXPRESSION TAG SEQADV 8YC1 PRO B -20 UNP O50542 EXPRESSION TAG SEQADV 8YC1 ARG B -19 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY B -18 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER B -17 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS B -16 UNP O50542 EXPRESSION TAG SEQADV 8YC1 MET B -15 UNP O50542 EXPRESSION TAG SEQADV 8YC1 ALA B -14 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER B -13 UNP O50542 EXPRESSION TAG SEQADV 8YC1 MET B -12 UNP O50542 EXPRESSION TAG SEQADV 8YC1 THR B -11 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY B -10 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY B -9 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLN B -8 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLN B -7 UNP O50542 EXPRESSION TAG SEQADV 8YC1 MET B -6 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY B -5 UNP O50542 EXPRESSION TAG SEQADV 8YC1 ARG B -4 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY B -3 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER B -2 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLU B -1 UNP O50542 EXPRESSION TAG SEQADV 8YC1 PHE B 0 UNP O50542 EXPRESSION TAG SEQADV 8YC1 ARG B 102 UNP O50542 GLU 122 CONFLICT SEQADV 8YC1 LYS B 137 UNP O50542 THR 157 CONFLICT SEQADV 8YC1 LYS B 140 UNP O50542 ARG 160 CONFLICT SEQADV 8YC1 HIS C -31 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS C -30 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS C -29 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS C -28 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS C -27 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS C -26 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER C -25 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER C -24 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY C -23 UNP O50542 EXPRESSION TAG SEQADV 8YC1 LEU C -22 UNP O50542 EXPRESSION TAG SEQADV 8YC1 VAL C -21 UNP O50542 EXPRESSION TAG SEQADV 8YC1 PRO C -20 UNP O50542 EXPRESSION TAG SEQADV 8YC1 ARG C -19 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY C -18 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER C -17 UNP O50542 EXPRESSION TAG SEQADV 8YC1 HIS C -16 UNP O50542 EXPRESSION TAG SEQADV 8YC1 MET C -15 UNP O50542 EXPRESSION TAG SEQADV 8YC1 ALA C -14 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER C -13 UNP O50542 EXPRESSION TAG SEQADV 8YC1 MET C -12 UNP O50542 EXPRESSION TAG SEQADV 8YC1 THR C -11 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY C -10 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY C -9 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLN C -8 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLN C -7 UNP O50542 EXPRESSION TAG SEQADV 8YC1 MET C -6 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY C -5 UNP O50542 EXPRESSION TAG SEQADV 8YC1 ARG C -4 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLY C -3 UNP O50542 EXPRESSION TAG SEQADV 8YC1 SER C -2 UNP O50542 EXPRESSION TAG SEQADV 8YC1 GLU C -1 UNP O50542 EXPRESSION TAG SEQADV 8YC1 PHE C 0 UNP O50542 EXPRESSION TAG SEQADV 8YC1 ARG C 102 UNP O50542 GLU 122 CONFLICT SEQADV 8YC1 LYS C 137 UNP O50542 THR 157 CONFLICT SEQADV 8YC1 LYS C 140 UNP O50542 ARG 160 CONFLICT SEQRES 1 A 261 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 261 GLY SER HIS MET ALA SER MET THR GLY GLY GLN GLN MET SEQRES 3 A 261 GLY ARG GLY SER GLU PHE SER ILE PRO PRO GLY ASN ASP SEQRES 4 A 261 VAL THR THR LYS PRO ASP LEU TYR TYR LEU THR ASN ASP SEQRES 5 A 261 ASN ALA ILE ASP SER LEU ALA LEU LEU PRO PRO PRO PRO SEQRES 6 A 261 GLN ILE GLY SER ILE ALA PHE LEU ASN ASP GLN ALA MET SEQRES 7 A 261 TYR GLU LYS GLY ARG LEU LEU ARG ASN THR GLU ARG GLY SEQRES 8 A 261 LYS LEU ALA ALA GLU ASP ALA ASN LEU SER SER GLY GLY SEQRES 9 A 261 VAL ALA ASN VAL PHE SER ALA ALA PHE GLY SER PRO ILE SEQRES 10 A 261 THR ALA LYS ASP SER PRO GLU LEU HIS LYS LEU LEU THR SEQRES 11 A 261 ASN MET ILE ARG ASP ALA GLY ASP LEU ALA THR ARG SER SEQRES 12 A 261 ALA LYS GLU TYR TYR MET ARG ILE ARG PRO PHE ALA PHE SEQRES 13 A 261 TYR GLY VAL SER THR CYS ASN THR LYS GLU GLN ASP LYS SEQRES 14 A 261 LEU SER LYS ASN GLY SER TYR PRO SER GLY HIS THR SER SEQRES 15 A 261 ILE GLY TRP ALA THR ALA LEU VAL LEU SER GLU ILE ASN SEQRES 16 A 261 PRO ALA ARG GLN ASP THR ILE LEU LYS ARG GLY TYR GLU SEQRES 17 A 261 LEU GLY ASP SER ARG VAL ILE CYS GLY TYR HIS TRP GLN SEQRES 18 A 261 SER ASP VAL ASP ALA ALA ARG ILE VAL GLY SER ALA ILE SEQRES 19 A 261 VAL ALA THR LEU HIS SER ASN PRO VAL PHE GLN ALA GLN SEQRES 20 A 261 LEU GLN LYS ALA LYS ASP GLU PHE ALA ASN ASN GLN LYS SEQRES 21 A 261 LYS SEQRES 1 B 261 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 B 261 GLY SER HIS MET ALA SER MET THR GLY GLY GLN GLN MET SEQRES 3 B 261 GLY ARG GLY SER GLU PHE SER ILE PRO PRO GLY ASN ASP SEQRES 4 B 261 VAL THR THR LYS PRO ASP LEU TYR TYR LEU THR ASN ASP SEQRES 5 B 261 ASN ALA ILE ASP SER LEU ALA LEU LEU PRO PRO PRO PRO SEQRES 6 B 261 GLN ILE GLY SER ILE ALA PHE LEU ASN ASP GLN ALA MET SEQRES 7 B 261 TYR GLU LYS GLY ARG LEU LEU ARG ASN THR GLU ARG GLY SEQRES 8 B 261 LYS LEU ALA ALA GLU ASP ALA ASN LEU SER SER GLY GLY SEQRES 9 B 261 VAL ALA ASN VAL PHE SER ALA ALA PHE GLY SER PRO ILE SEQRES 10 B 261 THR ALA LYS ASP SER PRO GLU LEU HIS LYS LEU LEU THR SEQRES 11 B 261 ASN MET ILE ARG ASP ALA GLY ASP LEU ALA THR ARG SER SEQRES 12 B 261 ALA LYS GLU TYR TYR MET ARG ILE ARG PRO PHE ALA PHE SEQRES 13 B 261 TYR GLY VAL SER THR CYS ASN THR LYS GLU GLN ASP LYS SEQRES 14 B 261 LEU SER LYS ASN GLY SER TYR PRO SER GLY HIS THR SER SEQRES 15 B 261 ILE GLY TRP ALA THR ALA LEU VAL LEU SER GLU ILE ASN SEQRES 16 B 261 PRO ALA ARG GLN ASP THR ILE LEU LYS ARG GLY TYR GLU SEQRES 17 B 261 LEU GLY ASP SER ARG VAL ILE CYS GLY TYR HIS TRP GLN SEQRES 18 B 261 SER ASP VAL ASP ALA ALA ARG ILE VAL GLY SER ALA ILE SEQRES 19 B 261 VAL ALA THR LEU HIS SER ASN PRO VAL PHE GLN ALA GLN SEQRES 20 B 261 LEU GLN LYS ALA LYS ASP GLU PHE ALA ASN ASN GLN LYS SEQRES 21 B 261 LYS SEQRES 1 C 261 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 C 261 GLY SER HIS MET ALA SER MET THR GLY GLY GLN GLN MET SEQRES 3 C 261 GLY ARG GLY SER GLU PHE SER ILE PRO PRO GLY ASN ASP SEQRES 4 C 261 VAL THR THR LYS PRO ASP LEU TYR TYR LEU THR ASN ASP SEQRES 5 C 261 ASN ALA ILE ASP SER LEU ALA LEU LEU PRO PRO PRO PRO SEQRES 6 C 261 GLN ILE GLY SER ILE ALA PHE LEU ASN ASP GLN ALA MET SEQRES 7 C 261 TYR GLU LYS GLY ARG LEU LEU ARG ASN THR GLU ARG GLY SEQRES 8 C 261 LYS LEU ALA ALA GLU ASP ALA ASN LEU SER SER GLY GLY SEQRES 9 C 261 VAL ALA ASN VAL PHE SER ALA ALA PHE GLY SER PRO ILE SEQRES 10 C 261 THR ALA LYS ASP SER PRO GLU LEU HIS LYS LEU LEU THR SEQRES 11 C 261 ASN MET ILE ARG ASP ALA GLY ASP LEU ALA THR ARG SER SEQRES 12 C 261 ALA LYS GLU TYR TYR MET ARG ILE ARG PRO PHE ALA PHE SEQRES 13 C 261 TYR GLY VAL SER THR CYS ASN THR LYS GLU GLN ASP LYS SEQRES 14 C 261 LEU SER LYS ASN GLY SER TYR PRO SER GLY HIS THR SER SEQRES 15 C 261 ILE GLY TRP ALA THR ALA LEU VAL LEU SER GLU ILE ASN SEQRES 16 C 261 PRO ALA ARG GLN ASP THR ILE LEU LYS ARG GLY TYR GLU SEQRES 17 C 261 LEU GLY ASP SER ARG VAL ILE CYS GLY TYR HIS TRP GLN SEQRES 18 C 261 SER ASP VAL ASP ALA ALA ARG ILE VAL GLY SER ALA ILE SEQRES 19 C 261 VAL ALA THR LEU HIS SER ASN PRO VAL PHE GLN ALA GLN SEQRES 20 C 261 LEU GLN LYS ALA LYS ASP GLU PHE ALA ASN ASN GLN LYS SEQRES 21 C 261 LYS HET GOL C 301 14 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL C3 H8 O3 HELIX 1 AA1 THR A 18 ALA A 22 5 5 HELIX 2 AA2 ASP A 24 LEU A 29 1 6 HELIX 3 AA3 SER A 37 LEU A 52 1 16 HELIX 4 AA4 THR A 56 ALA A 66 1 11 HELIX 5 AA5 SER A 69 GLY A 71 5 3 HELIX 6 AA6 GLY A 72 PHE A 77 1 6 HELIX 7 AA7 PHE A 77 GLY A 82 1 6 HELIX 8 AA8 SER A 90 MET A 100 1 11 HELIX 9 AA9 MET A 100 ASP A 106 1 7 HELIX 10 AB1 THR A 109 MET A 117 1 9 HELIX 11 AB2 ARG A 120 TYR A 125 1 6 HELIX 12 AB3 GLU A 134 LYS A 140 1 7 HELIX 13 AB4 SER A 146 ASN A 163 1 18 HELIX 14 AB5 ARG A 166 CYS A 184 1 19 HELIX 15 AB6 TRP A 188 HIS A 207 1 20 HELIX 16 AB7 ASN A 209 GLN A 227 1 19 HELIX 17 AB8 ASP B 24 LEU B 29 1 6 HELIX 18 AB9 SER B 37 ARG B 54 1 18 HELIX 19 AC1 THR B 56 LEU B 68 1 13 HELIX 20 AC2 VAL B 73 VAL B 76 5 4 HELIX 21 AC3 PHE B 77 GLY B 82 1 6 HELIX 22 AC4 SER B 90 MET B 100 1 11 HELIX 23 AC5 MET B 100 ASP B 106 1 7 HELIX 24 AC6 THR B 109 MET B 117 1 9 HELIX 25 AC7 ARG B 120 GLY B 126 1 7 HELIX 26 AC8 GLU B 134 SER B 139 1 6 HELIX 27 AC9 SER B 146 ASN B 163 1 18 HELIX 28 AD1 ARG B 166 CYS B 184 1 19 HELIX 29 AD2 TRP B 188 SER B 208 1 21 HELIX 30 AD3 ASN B 209 GLN B 227 1 19 HELIX 31 AD4 ASP C 24 LEU C 29 1 6 HELIX 32 AD5 SER C 37 LEU C 53 1 17 HELIX 33 AD6 THR C 56 LEU C 68 1 13 HELIX 34 AD7 SER C 69 GLY C 71 5 3 HELIX 35 AD8 GLY C 72 PHE C 77 1 6 HELIX 36 AD9 PHE C 77 GLY C 82 1 6 HELIX 37 AE1 SER C 90 MET C 100 1 11 HELIX 38 AE2 MET C 100 ASP C 106 1 7 HELIX 39 AE3 THR C 109 MET C 117 1 9 HELIX 40 AE4 ARG C 120 GLY C 126 1 7 HELIX 41 AE5 LYS C 137 ASN C 141 5 5 HELIX 42 AE6 SER C 146 ASN C 163 1 18 HELIX 43 AE7 ARG C 166 CYS C 184 1 19 HELIX 44 AE8 TRP C 188 SER C 208 1 21 HELIX 45 AE9 ASN C 209 ASN C 225 1 17 SSBOND 1 CYS A 130 CYS A 184 1555 1555 2.08 SSBOND 2 CYS B 130 CYS B 184 1555 1555 2.05 SSBOND 3 CYS C 130 CYS C 184 1555 1555 2.04 CISPEP 1 TYR A 144 PRO A 145 0 -10.33 CISPEP 2 TYR B 144 PRO B 145 0 -10.81 CISPEP 3 TYR C 144 PRO C 145 0 -10.92 CRYST1 98.840 98.840 144.050 90.00 90.00 120.00 P 31 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010117 0.005841 0.000000 0.00000 SCALE2 0.000000 0.011683 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006942 0.00000 TER 1759 LYS A 229 TER 3493 GLN B 227 TER 5188 ASN C 225 HETATM 5189 C1 GOL C 301 27.075 -36.917 -35.883 1.00 75.56 C HETATM 5190 O1 GOL C 301 26.048 -37.803 -35.491 1.00 53.62 O HETATM 5191 C2 GOL C 301 28.259 -37.692 -36.605 1.00 75.45 C HETATM 5192 O2 GOL C 301 28.871 -36.824 -37.547 1.00 65.18 O HETATM 5193 C3 GOL C 301 29.182 -38.167 -35.439 1.00 74.37 C HETATM 5194 O3 GOL C 301 30.222 -38.900 -36.023 1.00 72.81 O HETATM 5195 H11 GOL C 301 26.748 -36.235 -36.490 1.00 90.77 H HETATM 5196 H12 GOL C 301 27.447 -36.441 -35.124 1.00 90.77 H HETATM 5197 HO1 GOL C 301 26.413 -38.446 -35.101 1.00 64.45 H HETATM 5198 H2 GOL C 301 27.974 -38.472 -37.106 1.00 90.64 H HETATM 5199 HO2 GOL C 301 29.709 -36.834 -37.414 1.00 78.31 H HETATM 5200 H31 GOL C 301 28.654 -38.682 -34.809 1.00 89.35 H HETATM 5201 H32 GOL C 301 29.488 -37.392 -34.944 1.00 89.35 H HETATM 5202 HO3 GOL C 301 29.900 -39.203 -36.763 1.00 87.47 H CONECT 990 1405 CONECT 1405 990 CONECT 2743 3158 CONECT 3158 2743 CONECT 4455 4870 CONECT 4870 4455 CONECT 5189 5190 5191 5195 5196 CONECT 5190 5189 5197 CONECT 5191 5189 5192 5193 5198 CONECT 5192 5191 5199 CONECT 5193 5191 5194 5200 5201 CONECT 5194 5193 5202 CONECT 5195 5189 CONECT 5196 5189 CONECT 5197 5190 CONECT 5198 5191 CONECT 5199 5192 CONECT 5200 5193 CONECT 5201 5193 CONECT 5202 5194 MASTER 413 0 1 45 0 0 0 6 5191 3 20 63 END