data_8YDW # _entry.id 8YDW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8YDW pdb_00008ydw 10.2210/pdb8ydw/pdb WWPDB D_1300045368 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-01-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8YDW _pdbx_database_status.recvd_initial_deposition_date 2024-02-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 3 _pdbx_contact_author.email yoshi.cesp@tmd.ac.jp _pdbx_contact_author.name_first Yoshinori _pdbx_contact_author.name_last Fujiyoshi _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-8070-1493 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Nakamura, S.' 1 0000-0003-2253-6976 'Numoto, N.' 2 0000-0001-6113-9792 'Fujiyoshi, Y.' 3 0000-0002-8070-1493 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Development of a short-peptide inhibiting any SARS-CoV-2 variants based on structural biology' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nakamura, S.' 1 0000-0003-2253-6976 primary 'Tanimura, Y.' 2 ? primary 'Nomura, R.' 3 ? primary 'Suzuki, H.' 4 ? primary 'Nishikawa, K.' 5 ? primary 'Kamegawa, A.' 6 ? primary 'Numoto, N.' 7 ? primary 'Tanaka, A.' 8 ? primary 'Kawabata, S.' 9 ? primary 'Sakaguchi, S.' 10 ? primary 'Emi, A.' 11 ? primary 'Suzuki, Y.' 12 ? primary 'Fujiyoshi, Y.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'SARS-CoV-2 inhibiting peptide CeSPIACE' 4721.475 1 ? ? ? ? 2 polymer man 'Spike protein S1' 26204.250 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 water nat water 18.015 73 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no DKLWILQKIYEIMVRLDEEGHGEASLMVSDLIYEFMKRD DKLWILQKIYEIMVRLDEEGHGEASLMVSDLIYEFMKRD A ? 2 'polypeptide(L)' no no ;TNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFSAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAP GQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGPNCYSPL RSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGSNSENLYFQGSHHHHHHHHHHGLNDIFEAQKIEWHE ; ;TNLCPFHEVFNATTFASVYAWNRKRISNCVADYSVIYNFAPFSAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAP GQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKPSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGPNCYSPL RSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGSNSENLYFQGSHHHHHHHHHHGLNDIFEAQKIEWHE ; B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 'SODIUM ION' NA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 LYS n 1 3 LEU n 1 4 TRP n 1 5 ILE n 1 6 LEU n 1 7 GLN n 1 8 LYS n 1 9 ILE n 1 10 TYR n 1 11 GLU n 1 12 ILE n 1 13 MET n 1 14 VAL n 1 15 ARG n 1 16 LEU n 1 17 ASP n 1 18 GLU n 1 19 GLU n 1 20 GLY n 1 21 HIS n 1 22 GLY n 1 23 GLU n 1 24 ALA n 1 25 SER n 1 26 LEU n 1 27 MET n 1 28 VAL n 1 29 SER n 1 30 ASP n 1 31 LEU n 1 32 ILE n 1 33 TYR n 1 34 GLU n 1 35 PHE n 1 36 MET n 1 37 LYS n 1 38 ARG n 1 39 ASP n 2 1 THR n 2 2 ASN n 2 3 LEU n 2 4 CYS n 2 5 PRO n 2 6 PHE n 2 7 HIS n 2 8 GLU n 2 9 VAL n 2 10 PHE n 2 11 ASN n 2 12 ALA n 2 13 THR n 2 14 THR n 2 15 PHE n 2 16 ALA n 2 17 SER n 2 18 VAL n 2 19 TYR n 2 20 ALA n 2 21 TRP n 2 22 ASN n 2 23 ARG n 2 24 LYS n 2 25 ARG n 2 26 ILE n 2 27 SER n 2 28 ASN n 2 29 CYS n 2 30 VAL n 2 31 ALA n 2 32 ASP n 2 33 TYR n 2 34 SER n 2 35 VAL n 2 36 ILE n 2 37 TYR n 2 38 ASN n 2 39 PHE n 2 40 ALA n 2 41 PRO n 2 42 PHE n 2 43 SER n 2 44 ALA n 2 45 PHE n 2 46 LYS n 2 47 CYS n 2 48 TYR n 2 49 GLY n 2 50 VAL n 2 51 SER n 2 52 PRO n 2 53 THR n 2 54 LYS n 2 55 LEU n 2 56 ASN n 2 57 ASP n 2 58 LEU n 2 59 CYS n 2 60 PHE n 2 61 THR n 2 62 ASN n 2 63 VAL n 2 64 TYR n 2 65 ALA n 2 66 ASP n 2 67 SER n 2 68 PHE n 2 69 VAL n 2 70 ILE n 2 71 ARG n 2 72 GLY n 2 73 ASN n 2 74 GLU n 2 75 VAL n 2 76 SER n 2 77 GLN n 2 78 ILE n 2 79 ALA n 2 80 PRO n 2 81 GLY n 2 82 GLN n 2 83 THR n 2 84 GLY n 2 85 ASN n 2 86 ILE n 2 87 ALA n 2 88 ASP n 2 89 TYR n 2 90 ASN n 2 91 TYR n 2 92 LYS n 2 93 LEU n 2 94 PRO n 2 95 ASP n 2 96 ASP n 2 97 PHE n 2 98 THR n 2 99 GLY n 2 100 CYS n 2 101 VAL n 2 102 ILE n 2 103 ALA n 2 104 TRP n 2 105 ASN n 2 106 SER n 2 107 ASN n 2 108 LYS n 2 109 LEU n 2 110 ASP n 2 111 SER n 2 112 LYS n 2 113 PRO n 2 114 SER n 2 115 GLY n 2 116 ASN n 2 117 TYR n 2 118 ASN n 2 119 TYR n 2 120 LEU n 2 121 TYR n 2 122 ARG n 2 123 LEU n 2 124 PHE n 2 125 ARG n 2 126 LYS n 2 127 SER n 2 128 LYS n 2 129 LEU n 2 130 LYS n 2 131 PRO n 2 132 PHE n 2 133 GLU n 2 134 ARG n 2 135 ASP n 2 136 ILE n 2 137 SER n 2 138 THR n 2 139 GLU n 2 140 ILE n 2 141 TYR n 2 142 GLN n 2 143 ALA n 2 144 GLY n 2 145 ASN n 2 146 LYS n 2 147 PRO n 2 148 CYS n 2 149 ASN n 2 150 GLY n 2 151 VAL n 2 152 ALA n 2 153 GLY n 2 154 PRO n 2 155 ASN n 2 156 CYS n 2 157 TYR n 2 158 SER n 2 159 PRO n 2 160 LEU n 2 161 ARG n 2 162 SER n 2 163 TYR n 2 164 GLY n 2 165 PHE n 2 166 ARG n 2 167 PRO n 2 168 THR n 2 169 TYR n 2 170 GLY n 2 171 VAL n 2 172 GLY n 2 173 HIS n 2 174 GLN n 2 175 PRO n 2 176 TYR n 2 177 ARG n 2 178 VAL n 2 179 VAL n 2 180 VAL n 2 181 LEU n 2 182 SER n 2 183 PHE n 2 184 GLU n 2 185 LEU n 2 186 LEU n 2 187 HIS n 2 188 ALA n 2 189 PRO n 2 190 ALA n 2 191 THR n 2 192 VAL n 2 193 CYS n 2 194 GLY n 2 195 SER n 2 196 ASN n 2 197 SER n 2 198 GLU n 2 199 ASN n 2 200 LEU n 2 201 TYR n 2 202 PHE n 2 203 GLN n 2 204 GLY n 2 205 SER n 2 206 HIS n 2 207 HIS n 2 208 HIS n 2 209 HIS n 2 210 HIS n 2 211 HIS n 2 212 HIS n 2 213 HIS n 2 214 HIS n 2 215 HIS n 2 216 GLY n 2 217 LEU n 2 218 ASN n 2 219 ASP n 2 220 ILE n 2 221 PHE n 2 222 GLU n 2 223 ALA n 2 224 GLN n 2 225 LYS n 2 226 ILE n 2 227 GLU n 2 228 TRP n 2 229 HIS n 2 230 GLU n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 230 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'S, 2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Severe acute respiratory syndrome coronavirus 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2697049 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line Expi293F _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 39 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 TRP 4 4 4 TRP TRP A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 MET 13 13 13 MET MET A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 HIS 21 21 21 HIS HIS A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 MET 27 27 27 MET MET A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 TYR 33 33 33 TYR TYR A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 ASP 39 39 39 ASP ASP A . n B 2 1 THR 1 333 ? ? ? B . n B 2 2 ASN 2 334 334 ASN ASN B . n B 2 3 LEU 3 335 335 LEU LEU B . n B 2 4 CYS 4 336 336 CYS CYS B . n B 2 5 PRO 5 337 337 PRO PRO B . n B 2 6 PHE 6 338 338 PHE PHE B . n B 2 7 HIS 7 339 339 HIS HIS B . n B 2 8 GLU 8 340 340 GLU GLU B . n B 2 9 VAL 9 341 341 VAL VAL B . n B 2 10 PHE 10 342 342 PHE PHE B . n B 2 11 ASN 11 343 343 ASN ASN B . n B 2 12 ALA 12 344 344 ALA ALA B . n B 2 13 THR 13 345 345 THR THR B . n B 2 14 THR 14 346 346 THR THR B . n B 2 15 PHE 15 347 347 PHE PHE B . n B 2 16 ALA 16 348 348 ALA ALA B . n B 2 17 SER 17 349 349 SER SER B . n B 2 18 VAL 18 350 350 VAL VAL B . n B 2 19 TYR 19 351 351 TYR TYR B . n B 2 20 ALA 20 352 352 ALA ALA B . n B 2 21 TRP 21 353 353 TRP TRP B . n B 2 22 ASN 22 354 354 ASN ASN B . n B 2 23 ARG 23 355 355 ARG ARG B . n B 2 24 LYS 24 356 356 LYS LYS B . n B 2 25 ARG 25 357 357 ARG ARG B . n B 2 26 ILE 26 358 358 ILE ILE B . n B 2 27 SER 27 359 359 SER SER B . n B 2 28 ASN 28 360 360 ASN ASN B . n B 2 29 CYS 29 361 361 CYS CYS B . n B 2 30 VAL 30 362 362 VAL VAL B . n B 2 31 ALA 31 363 363 ALA ALA B . n B 2 32 ASP 32 364 364 ASP ASP B . n B 2 33 TYR 33 365 365 TYR TYR B . n B 2 34 SER 34 366 366 SER SER B . n B 2 35 VAL 35 367 367 VAL VAL B . n B 2 36 ILE 36 368 368 ILE ILE B . n B 2 37 TYR 37 369 369 TYR TYR B . n B 2 38 ASN 38 370 370 ASN ASN B . n B 2 39 PHE 39 371 371 PHE PHE B . n B 2 40 ALA 40 372 372 ALA ALA B . n B 2 41 PRO 41 373 373 PRO PRO B . n B 2 42 PHE 42 374 374 PHE PHE B . n B 2 43 SER 43 375 375 SER SER B . n B 2 44 ALA 44 376 376 ALA ALA B . n B 2 45 PHE 45 377 377 PHE PHE B . n B 2 46 LYS 46 378 378 LYS LYS B . n B 2 47 CYS 47 379 379 CYS CYS B . n B 2 48 TYR 48 380 380 TYR TYR B . n B 2 49 GLY 49 381 381 GLY GLY B . n B 2 50 VAL 50 382 382 VAL VAL B . n B 2 51 SER 51 383 383 SER SER B . n B 2 52 PRO 52 384 384 PRO PRO B . n B 2 53 THR 53 385 385 THR THR B . n B 2 54 LYS 54 386 386 LYS LYS B . n B 2 55 LEU 55 387 387 LEU LEU B . n B 2 56 ASN 56 388 388 ASN ASN B . n B 2 57 ASP 57 389 389 ASP ASP B . n B 2 58 LEU 58 390 390 LEU LEU B . n B 2 59 CYS 59 391 391 CYS CYS B . n B 2 60 PHE 60 392 392 PHE PHE B . n B 2 61 THR 61 393 393 THR THR B . n B 2 62 ASN 62 394 394 ASN ASN B . n B 2 63 VAL 63 395 395 VAL VAL B . n B 2 64 TYR 64 396 396 TYR TYR B . n B 2 65 ALA 65 397 397 ALA ALA B . n B 2 66 ASP 66 398 398 ASP ASP B . n B 2 67 SER 67 399 399 SER SER B . n B 2 68 PHE 68 400 400 PHE PHE B . n B 2 69 VAL 69 401 401 VAL VAL B . n B 2 70 ILE 70 402 402 ILE ILE B . n B 2 71 ARG 71 403 403 ARG ARG B . n B 2 72 GLY 72 404 404 GLY GLY B . n B 2 73 ASN 73 405 405 ASN ASN B . n B 2 74 GLU 74 406 406 GLU GLU B . n B 2 75 VAL 75 407 407 VAL VAL B . n B 2 76 SER 76 408 408 SER SER B . n B 2 77 GLN 77 409 409 GLN GLN B . n B 2 78 ILE 78 410 410 ILE ILE B . n B 2 79 ALA 79 411 411 ALA ALA B . n B 2 80 PRO 80 412 412 PRO PRO B . n B 2 81 GLY 81 413 413 GLY GLY B . n B 2 82 GLN 82 414 414 GLN GLN B . n B 2 83 THR 83 415 415 THR THR B . n B 2 84 GLY 84 416 416 GLY GLY B . n B 2 85 ASN 85 417 417 ASN ASN B . n B 2 86 ILE 86 418 418 ILE ILE B . n B 2 87 ALA 87 419 419 ALA ALA B . n B 2 88 ASP 88 420 420 ASP ASP B . n B 2 89 TYR 89 421 421 TYR TYR B . n B 2 90 ASN 90 422 422 ASN ASN B . n B 2 91 TYR 91 423 423 TYR TYR B . n B 2 92 LYS 92 424 424 LYS LYS B . n B 2 93 LEU 93 425 425 LEU LEU B . n B 2 94 PRO 94 426 426 PRO PRO B . n B 2 95 ASP 95 427 427 ASP ASP B . n B 2 96 ASP 96 428 428 ASP ASP B . n B 2 97 PHE 97 429 429 PHE PHE B . n B 2 98 THR 98 430 430 THR THR B . n B 2 99 GLY 99 431 431 GLY GLY B . n B 2 100 CYS 100 432 432 CYS CYS B . n B 2 101 VAL 101 433 433 VAL VAL B . n B 2 102 ILE 102 434 434 ILE ILE B . n B 2 103 ALA 103 435 435 ALA ALA B . n B 2 104 TRP 104 436 436 TRP TRP B . n B 2 105 ASN 105 437 437 ASN ASN B . n B 2 106 SER 106 438 438 SER SER B . n B 2 107 ASN 107 439 439 ASN ASN B . n B 2 108 LYS 108 440 440 LYS LYS B . n B 2 109 LEU 109 441 441 LEU LEU B . n B 2 110 ASP 110 442 442 ASP ASP B . n B 2 111 SER 111 443 443 SER SER B . n B 2 112 LYS 112 444 444 LYS LYS B . n B 2 113 PRO 113 445 445 PRO PRO B . n B 2 114 SER 114 446 446 SER SER B . n B 2 115 GLY 115 447 447 GLY GLY B . n B 2 116 ASN 116 448 448 ASN ASN B . n B 2 117 TYR 117 449 449 TYR TYR B . n B 2 118 ASN 118 450 450 ASN ASN B . n B 2 119 TYR 119 451 451 TYR TYR B . n B 2 120 LEU 120 452 452 LEU LEU B . n B 2 121 TYR 121 453 453 TYR TYR B . n B 2 122 ARG 122 454 454 ARG ARG B . n B 2 123 LEU 123 455 455 LEU LEU B . n B 2 124 PHE 124 456 456 PHE PHE B . n B 2 125 ARG 125 457 457 ARG ARG B . n B 2 126 LYS 126 458 458 LYS LYS B . n B 2 127 SER 127 459 459 SER SER B . n B 2 128 LYS 128 460 460 LYS LYS B . n B 2 129 LEU 129 461 461 LEU LEU B . n B 2 130 LYS 130 462 462 LYS LYS B . n B 2 131 PRO 131 463 463 PRO PRO B . n B 2 132 PHE 132 464 464 PHE PHE B . n B 2 133 GLU 133 465 465 GLU GLU B . n B 2 134 ARG 134 466 466 ARG ARG B . n B 2 135 ASP 135 467 467 ASP ASP B . n B 2 136 ILE 136 468 468 ILE ILE B . n B 2 137 SER 137 469 469 SER SER B . n B 2 138 THR 138 470 470 THR THR B . n B 2 139 GLU 139 471 471 GLU GLU B . n B 2 140 ILE 140 472 472 ILE ILE B . n B 2 141 TYR 141 473 473 TYR TYR B . n B 2 142 GLN 142 474 474 GLN GLN B . n B 2 143 ALA 143 475 475 ALA ALA B . n B 2 144 GLY 144 476 476 GLY GLY B . n B 2 145 ASN 145 477 477 ASN ASN B . n B 2 146 LYS 146 478 478 LYS LYS B . n B 2 147 PRO 147 479 479 PRO PRO B . n B 2 148 CYS 148 480 480 CYS CYS B . n B 2 149 ASN 149 481 481 ASN ASN B . n B 2 150 GLY 150 482 482 GLY GLY B . n B 2 151 VAL 151 483 483 VAL VAL B . n B 2 152 ALA 152 484 484 ALA ALA B . n B 2 153 GLY 153 485 485 GLY GLY B . n B 2 154 PRO 154 486 486 PRO PRO B . n B 2 155 ASN 155 487 487 ASN ASN B . n B 2 156 CYS 156 488 488 CYS CYS B . n B 2 157 TYR 157 489 489 TYR TYR B . n B 2 158 SER 158 490 490 SER SER B . n B 2 159 PRO 159 491 491 PRO PRO B . n B 2 160 LEU 160 492 492 LEU LEU B . n B 2 161 ARG 161 493 493 ARG ARG B . n B 2 162 SER 162 494 494 SER SER B . n B 2 163 TYR 163 495 495 TYR TYR B . n B 2 164 GLY 164 496 496 GLY GLY B . n B 2 165 PHE 165 497 497 PHE PHE B . n B 2 166 ARG 166 498 498 ARG ARG B . n B 2 167 PRO 167 499 499 PRO PRO B . n B 2 168 THR 168 500 500 THR THR B . n B 2 169 TYR 169 501 501 TYR TYR B . n B 2 170 GLY 170 502 502 GLY GLY B . n B 2 171 VAL 171 503 503 VAL VAL B . n B 2 172 GLY 172 504 504 GLY GLY B . n B 2 173 HIS 173 505 505 HIS HIS B . n B 2 174 GLN 174 506 506 GLN GLN B . n B 2 175 PRO 175 507 507 PRO PRO B . n B 2 176 TYR 176 508 508 TYR TYR B . n B 2 177 ARG 177 509 509 ARG ARG B . n B 2 178 VAL 178 510 510 VAL VAL B . n B 2 179 VAL 179 511 511 VAL VAL B . n B 2 180 VAL 180 512 512 VAL VAL B . n B 2 181 LEU 181 513 513 LEU LEU B . n B 2 182 SER 182 514 514 SER SER B . n B 2 183 PHE 183 515 515 PHE PHE B . n B 2 184 GLU 184 516 516 GLU GLU B . n B 2 185 LEU 185 517 517 LEU LEU B . n B 2 186 LEU 186 518 518 LEU LEU B . n B 2 187 HIS 187 519 519 HIS HIS B . n B 2 188 ALA 188 520 520 ALA ALA B . n B 2 189 PRO 189 521 521 PRO PRO B . n B 2 190 ALA 190 522 522 ALA ALA B . n B 2 191 THR 191 523 523 THR THR B . n B 2 192 VAL 192 524 524 VAL VAL B . n B 2 193 CYS 193 525 525 CYS CYS B . n B 2 194 GLY 194 526 526 GLY GLY B . n B 2 195 SER 195 527 527 SER SER B . n B 2 196 ASN 196 528 528 ASN ASN B . n B 2 197 SER 197 529 529 SER SER B . n B 2 198 GLU 198 530 530 GLU GLU B . n B 2 199 ASN 199 531 ? ? ? B . n B 2 200 LEU 200 532 ? ? ? B . n B 2 201 TYR 201 533 ? ? ? B . n B 2 202 PHE 202 534 ? ? ? B . n B 2 203 GLN 203 535 ? ? ? B . n B 2 204 GLY 204 536 ? ? ? B . n B 2 205 SER 205 537 ? ? ? B . n B 2 206 HIS 206 538 ? ? ? B . n B 2 207 HIS 207 539 ? ? ? B . n B 2 208 HIS 208 540 ? ? ? B . n B 2 209 HIS 209 541 ? ? ? B . n B 2 210 HIS 210 542 ? ? ? B . n B 2 211 HIS 211 543 ? ? ? B . n B 2 212 HIS 212 544 ? ? ? B . n B 2 213 HIS 213 545 ? ? ? B . n B 2 214 HIS 214 546 ? ? ? B . n B 2 215 HIS 215 547 ? ? ? B . n B 2 216 GLY 216 548 ? ? ? B . n B 2 217 LEU 217 549 ? ? ? B . n B 2 218 ASN 218 550 ? ? ? B . n B 2 219 ASP 219 551 ? ? ? B . n B 2 220 ILE 220 552 ? ? ? B . n B 2 221 PHE 221 553 ? ? ? B . n B 2 222 GLU 222 554 ? ? ? B . n B 2 223 ALA 223 555 ? ? ? B . n B 2 224 GLN 224 556 ? ? ? B . n B 2 225 LYS 225 557 ? ? ? B . n B 2 226 ILE 226 558 ? ? ? B . n B 2 227 GLU 227 559 ? ? ? B . n B 2 228 TRP 228 560 ? ? ? B . n B 2 229 HIS 229 561 ? ? ? B . n B 2 230 GLU 230 562 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL 1 601 102 GOL GOL B . D 4 NA 1 602 1 NA NA B . E 5 HOH 1 101 15 HOH HOH A . E 5 HOH 2 102 100 HOH HOH A . E 5 HOH 3 103 62 HOH HOH A . E 5 HOH 4 104 5 HOH HOH A . E 5 HOH 5 105 43 HOH HOH A . E 5 HOH 6 106 27 HOH HOH A . E 5 HOH 7 107 199 HOH HOH A . E 5 HOH 8 108 35 HOH HOH A . E 5 HOH 9 109 39 HOH HOH A . E 5 HOH 10 110 41 HOH HOH A . E 5 HOH 11 111 200 HOH HOH A . F 5 HOH 1 701 31 HOH HOH B . F 5 HOH 2 702 170 HOH HOH B . F 5 HOH 3 703 12 HOH HOH B . F 5 HOH 4 704 104 HOH HOH B . F 5 HOH 5 705 36 HOH HOH B . F 5 HOH 6 706 29 HOH HOH B . F 5 HOH 7 707 92 HOH HOH B . F 5 HOH 8 708 11 HOH HOH B . F 5 HOH 9 709 3 HOH HOH B . F 5 HOH 10 710 83 HOH HOH B . F 5 HOH 11 711 16 HOH HOH B . F 5 HOH 12 712 26 HOH HOH B . F 5 HOH 13 713 9 HOH HOH B . F 5 HOH 14 714 21 HOH HOH B . F 5 HOH 15 715 8 HOH HOH B . F 5 HOH 16 716 32 HOH HOH B . F 5 HOH 17 717 105 HOH HOH B . F 5 HOH 18 718 13 HOH HOH B . F 5 HOH 19 719 23 HOH HOH B . F 5 HOH 20 720 17 HOH HOH B . F 5 HOH 21 721 6 HOH HOH B . F 5 HOH 22 722 10 HOH HOH B . F 5 HOH 23 723 202 HOH HOH B . F 5 HOH 24 724 24 HOH HOH B . F 5 HOH 25 725 2 HOH HOH B . F 5 HOH 26 726 77 HOH HOH B . F 5 HOH 27 727 88 HOH HOH B . F 5 HOH 28 728 4 HOH HOH B . F 5 HOH 29 729 166 HOH HOH B . F 5 HOH 30 730 7 HOH HOH B . F 5 HOH 31 731 20 HOH HOH B . F 5 HOH 32 732 73 HOH HOH B . F 5 HOH 33 733 22 HOH HOH B . F 5 HOH 34 734 130 HOH HOH B . F 5 HOH 35 735 19 HOH HOH B . F 5 HOH 36 736 81 HOH HOH B . F 5 HOH 37 737 95 HOH HOH B . F 5 HOH 38 738 80 HOH HOH B . F 5 HOH 39 739 55 HOH HOH B . F 5 HOH 40 740 190 HOH HOH B . F 5 HOH 41 741 67 HOH HOH B . F 5 HOH 42 742 94 HOH HOH B . F 5 HOH 43 743 33 HOH HOH B . F 5 HOH 44 744 54 HOH HOH B . F 5 HOH 45 745 169 HOH HOH B . F 5 HOH 46 746 99 HOH HOH B . F 5 HOH 47 747 203 HOH HOH B . F 5 HOH 48 748 70 HOH HOH B . F 5 HOH 49 749 56 HOH HOH B . F 5 HOH 50 750 52 HOH HOH B . F 5 HOH 51 751 51 HOH HOH B . F 5 HOH 52 752 204 HOH HOH B . F 5 HOH 53 753 48 HOH HOH B . F 5 HOH 54 754 173 HOH HOH B . F 5 HOH 55 755 188 HOH HOH B . F 5 HOH 56 756 101 HOH HOH B . F 5 HOH 57 757 103 HOH HOH B . F 5 HOH 58 758 205 HOH HOH B . F 5 HOH 59 759 86 HOH HOH B . F 5 HOH 60 760 68 HOH HOH B . F 5 HOH 61 761 82 HOH HOH B . F 5 HOH 62 762 129 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0411 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8YDW _cell.details ? _cell.formula_units_Z ? _cell.length_a 74.760 _cell.length_a_esd ? _cell.length_b 74.760 _cell.length_b_esd ? _cell.length_c 100.070 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8YDW _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8YDW _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.61 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 52.88 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M CHES (pH 9.5), 20% PEG 8000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-07-14 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL45XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL45XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8YDW _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.72 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 34940 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.0 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.09 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.72 _reflns_shell.d_res_low 1.82 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 5379 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.702 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] 2.838 _refine.aniso_B[1][2] 1.419 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] 2.838 _refine.aniso_B[2][3] -0.000 _refine.aniso_B[3][3] -9.206 _refine.B_iso_max ? _refine.B_iso_mean 65.885 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.943 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8YDW _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.000 _refine.ls_d_res_low 39.622 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 22387 _refine.ls_number_reflns_R_free 1111 _refine.ls_number_reflns_R_work 21276 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.893 _refine.ls_percent_reflns_R_free 4.963 _refine.ls_R_factor_all 0.225 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2538 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2230 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.174 _refine.pdbx_overall_ESU_R_Free 0.157 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1889 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 73 _refine_hist.number_atoms_total 1969 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low 39.622 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 0.012 1950 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.016 1772 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.346 1.648 2648 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.769 1.569 4078 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.284 5.000 234 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 6.672 5.000 11 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.127 10.000 305 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 14.776 10.000 95 ? r_dihedral_angle_6_deg ? ? 'X-RAY DIFFRACTION' ? 0.064 0.200 277 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 2294 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.009 0.020 486 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.231 0.200 392 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.216 0.200 1740 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.193 0.200 974 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.086 0.200 1035 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.149 0.200 84 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.041 0.200 1 ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? 0.061 0.200 6 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.165 0.200 52 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.123 0.200 3 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 5.734 6.622 942 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 5.732 6.622 942 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 7.813 11.864 1174 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 7.809 11.866 1175 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 6.099 7.019 1008 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 6.082 7.015 1007 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 8.609 12.709 1474 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 8.606 12.710 1475 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 10.858 63.679 2222 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 10.848 63.698 2217 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.000 2.052 1623 . 80 1543 100.0000 . 0.402 . . 0.407 . . . . . 0.369 . 20 . 0.822 0.801 0.308 'X-RAY DIFFRACTION' 2.052 2.108 1573 . 77 1492 99.7457 . 0.385 . . 0.389 . . . . . 0.355 . 20 . 0.844 0.825 0.319 'X-RAY DIFFRACTION' 2.108 2.169 1558 . 80 1477 99.9358 . 0.348 . . 0.346 . . . . . 0.305 . 20 . 0.885 0.865 0.385 'X-RAY DIFFRACTION' 2.169 2.235 1492 . 72 1419 99.9330 . 0.333 . . 0.330 . . . . . 0.299 . 20 . 0.913 0.915 0.375 'X-RAY DIFFRACTION' 2.235 2.308 1464 . 72 1392 100.0000 . 0.274 . . 0.274 . . . . . 0.246 . 20 . 0.940 0.922 0.269 'X-RAY DIFFRACTION' 2.308 2.389 1407 . 70 1336 99.9289 . 0.256 . . 0.254 . . . . . 0.229 . 20 . 0.950 0.929 0.298 'X-RAY DIFFRACTION' 2.389 2.479 1374 . 70 1303 99.9272 . 0.255 . . 0.253 . . . . . 0.229 . 20 . 0.955 0.944 0.291 'X-RAY DIFFRACTION' 2.479 2.580 1305 . 62 1239 99.6935 . 0.236 . . 0.235 . . . . . 0.213 . 20 . 0.962 0.947 0.267 'X-RAY DIFFRACTION' 2.580 2.694 1260 . 63 1196 99.9206 . 0.223 . . 0.221 . . . . . 0.207 . 20 . 0.964 0.959 0.258 'X-RAY DIFFRACTION' 2.694 2.825 1212 . 62 1150 100.0000 . 0.235 . . 0.231 . . . . . 0.220 . 20 . 0.963 0.932 0.333 'X-RAY DIFFRACTION' 2.825 2.977 1160 . 60 1100 100.0000 . 0.248 . . 0.246 . . . . . 0.233 . 20 . 0.960 0.955 0.284 'X-RAY DIFFRACTION' 2.977 3.156 1096 . 56 1040 100.0000 . 0.249 . . 0.246 . . . . . 0.244 . 20 . 0.958 0.945 0.289 'X-RAY DIFFRACTION' 3.156 3.373 1019 . 50 969 100.0000 . 0.250 . . 0.246 . . . . . 0.236 . 20 . 0.963 0.926 0.322 'X-RAY DIFFRACTION' 3.373 3.641 975 . 49 926 100.0000 . 0.230 . . 0.230 . . . . . 0.233 . 20 . 0.969 0.957 0.232 'X-RAY DIFFRACTION' 3.641 3.985 892 . 42 846 99.5516 . 0.214 . . 0.209 . . . . . 0.222 . 20 . 0.974 0.935 0.330 'X-RAY DIFFRACTION' 3.985 4.450 817 . 41 775 99.8776 . 0.182 . . 0.181 . . . . . 0.206 . 20 . 0.979 0.972 0.196 'X-RAY DIFFRACTION' 4.450 5.127 730 . 33 696 99.8630 . 0.176 . . 0.175 . . . . . 0.204 . 20 . 0.983 0.972 0.197 'X-RAY DIFFRACTION' 5.127 6.253 630 . 32 598 100.0000 . 0.196 . . 0.197 . . . . . 0.239 . 20 . 0.980 0.980 0.182 'X-RAY DIFFRACTION' 6.253 8.735 492 . 24 468 100.0000 . 0.186 . . 0.184 . . . . . 0.224 . 20 . 0.979 0.976 0.221 'X-RAY DIFFRACTION' 8.735 39.622 321 . 16 303 99.3769 . 0.177 . . 0.176 . . . . . 0.225 . 20 . 0.977 0.975 0.191 # _struct.entry_id 8YDW _struct.title 'Crystal structure of the receptor binding domain of SARS-CoV-2 Omicron XBB.1.5 variant spike protein in complex with CeSPIACE' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8YDW _struct_keywords.text 'RBD, VIRAL PROTEIN-INHIBITOR COMPLEX' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8YDW 8YDW ? 1 ? 1 2 UNP SPIKE_SARS2 P0DTC2 ? 2 ;TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAP GQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPL QSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG ; 333 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8YDW A 1 ? 39 ? 8YDW 1 ? 39 ? 1 39 2 2 8YDW B 1 ? 194 ? P0DTC2 333 ? 526 ? 333 526 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 8YDW HIS B 7 ? UNP P0DTC2 GLY 339 variant 339 1 2 8YDW THR B 14 ? UNP P0DTC2 ARG 346 variant 346 2 2 8YDW ILE B 36 ? UNP P0DTC2 LEU 368 variant 368 3 2 8YDW PHE B 39 ? UNP P0DTC2 SER 371 variant 371 4 2 8YDW PRO B 41 ? UNP P0DTC2 SER 373 variant 373 5 2 8YDW ALA B 44 ? UNP P0DTC2 THR 376 variant 376 6 2 8YDW ASN B 73 ? UNP P0DTC2 ASP 405 variant 405 7 2 8YDW SER B 76 ? UNP P0DTC2 ARG 408 variant 408 8 2 8YDW ASN B 85 ? UNP P0DTC2 LYS 417 variant 417 9 2 8YDW LYS B 108 ? UNP P0DTC2 ASN 440 variant 440 10 2 8YDW PRO B 113 ? UNP P0DTC2 VAL 445 variant 445 11 2 8YDW SER B 114 ? UNP P0DTC2 GLY 446 variant 446 12 2 8YDW LYS B 128 ? UNP P0DTC2 ASN 460 variant 460 13 2 8YDW ASN B 145 ? UNP P0DTC2 SER 477 variant 477 14 2 8YDW LYS B 146 ? UNP P0DTC2 THR 478 variant 478 15 2 8YDW ALA B 152 ? UNP P0DTC2 GLU 484 variant 484 16 2 8YDW PRO B 154 ? UNP P0DTC2 PHE 486 variant 486 17 2 8YDW SER B 158 ? UNP P0DTC2 PHE 490 variant 490 18 2 8YDW ARG B 161 ? UNP P0DTC2 GLN 493 variant 493 19 2 8YDW ARG B 166 ? UNP P0DTC2 GLN 498 variant 498 20 2 8YDW TYR B 169 ? UNP P0DTC2 ASN 501 variant 501 21 2 8YDW HIS B 173 ? UNP P0DTC2 TYR 505 variant 505 22 2 8YDW SER B 195 ? UNP P0DTC2 ? ? 'expression tag' 527 23 2 8YDW ASN B 196 ? UNP P0DTC2 ? ? 'expression tag' 528 24 2 8YDW SER B 197 ? UNP P0DTC2 ? ? 'expression tag' 529 25 2 8YDW GLU B 198 ? UNP P0DTC2 ? ? 'expression tag' 530 26 2 8YDW ASN B 199 ? UNP P0DTC2 ? ? 'expression tag' 531 27 2 8YDW LEU B 200 ? UNP P0DTC2 ? ? 'expression tag' 532 28 2 8YDW TYR B 201 ? UNP P0DTC2 ? ? 'expression tag' 533 29 2 8YDW PHE B 202 ? UNP P0DTC2 ? ? 'expression tag' 534 30 2 8YDW GLN B 203 ? UNP P0DTC2 ? ? 'expression tag' 535 31 2 8YDW GLY B 204 ? UNP P0DTC2 ? ? 'expression tag' 536 32 2 8YDW SER B 205 ? UNP P0DTC2 ? ? 'expression tag' 537 33 2 8YDW HIS B 206 ? UNP P0DTC2 ? ? 'expression tag' 538 34 2 8YDW HIS B 207 ? UNP P0DTC2 ? ? 'expression tag' 539 35 2 8YDW HIS B 208 ? UNP P0DTC2 ? ? 'expression tag' 540 36 2 8YDW HIS B 209 ? UNP P0DTC2 ? ? 'expression tag' 541 37 2 8YDW HIS B 210 ? UNP P0DTC2 ? ? 'expression tag' 542 38 2 8YDW HIS B 211 ? UNP P0DTC2 ? ? 'expression tag' 543 39 2 8YDW HIS B 212 ? UNP P0DTC2 ? ? 'expression tag' 544 40 2 8YDW HIS B 213 ? UNP P0DTC2 ? ? 'expression tag' 545 41 2 8YDW HIS B 214 ? UNP P0DTC2 ? ? 'expression tag' 546 42 2 8YDW HIS B 215 ? UNP P0DTC2 ? ? 'expression tag' 547 43 2 8YDW GLY B 216 ? UNP P0DTC2 ? ? 'expression tag' 548 44 2 8YDW LEU B 217 ? UNP P0DTC2 ? ? 'expression tag' 549 45 2 8YDW ASN B 218 ? UNP P0DTC2 ? ? 'expression tag' 550 46 2 8YDW ASP B 219 ? UNP P0DTC2 ? ? 'expression tag' 551 47 2 8YDW ILE B 220 ? UNP P0DTC2 ? ? 'expression tag' 552 48 2 8YDW PHE B 221 ? UNP P0DTC2 ? ? 'expression tag' 553 49 2 8YDW GLU B 222 ? UNP P0DTC2 ? ? 'expression tag' 554 50 2 8YDW ALA B 223 ? UNP P0DTC2 ? ? 'expression tag' 555 51 2 8YDW GLN B 224 ? UNP P0DTC2 ? ? 'expression tag' 556 52 2 8YDW LYS B 225 ? UNP P0DTC2 ? ? 'expression tag' 557 53 2 8YDW ILE B 226 ? UNP P0DTC2 ? ? 'expression tag' 558 54 2 8YDW GLU B 227 ? UNP P0DTC2 ? ? 'expression tag' 559 55 2 8YDW TRP B 228 ? UNP P0DTC2 ? ? 'expression tag' 560 56 2 8YDW HIS B 229 ? UNP P0DTC2 ? ? 'expression tag' 561 57 2 8YDW GLU B 230 ? UNP P0DTC2 ? ? 'expression tag' 562 58 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2320 ? 1 MORE -14 ? 1 'SSA (A^2)' 11830 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 1 ? GLU A 19 ? ASP A 1 GLU A 19 1 ? 19 HELX_P HELX_P2 AA2 HIS A 21 ? ARG A 38 ? HIS A 21 ARG A 38 1 ? 18 HELX_P HELX_P3 AA3 PHE B 6 ? ASN B 11 ? PHE B 338 ASN B 343 1 ? 6 HELX_P HELX_P4 AA4 SER B 51 ? ASN B 56 ? SER B 383 ASN B 388 1 ? 6 HELX_P HELX_P5 AA5 ASN B 73 ? ILE B 78 ? ASN B 405 ILE B 410 5 ? 6 HELX_P HELX_P6 AA6 GLY B 84 ? ASN B 90 ? GLY B 416 ASN B 422 1 ? 7 HELX_P HELX_P7 AA7 SER B 106 ? SER B 111 ? SER B 438 SER B 443 1 ? 6 HELX_P HELX_P8 AA8 GLY B 170 ? HIS B 173 ? GLY B 502 HIS B 505 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? B CYS 4 SG ? ? ? 1_555 B CYS 29 SG ? ? B CYS 336 B CYS 361 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf2 disulf ? ? B CYS 47 SG ? ? ? 1_555 B CYS 100 SG ? ? B CYS 379 B CYS 432 1_555 ? ? ? ? ? ? ? 2.141 ? ? disulf3 disulf ? ? B CYS 59 SG ? ? ? 1_555 B CYS 193 SG ? ? B CYS 391 B CYS 525 1_555 ? ? ? ? ? ? ? 2.060 ? ? disulf4 disulf ? ? B CYS 148 SG ? ? ? 1_555 B CYS 156 SG ? ? B CYS 480 B CYS 488 1_555 ? ? ? ? ? ? ? 2.082 ? ? metalc1 metalc ? ? B ASN 73 O ? ? ? 1_555 D NA . NA ? ? B ASN 405 B NA 602 1_555 ? ? ? ? ? ? ? 2.369 ? ? metalc2 metalc ? ? B SER 76 OG ? ? ? 1_555 D NA . NA ? ? B SER 408 B NA 602 1_555 ? ? ? ? ? ? ? 2.518 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id B _pdbx_struct_conn_angle.ptnr1_label_comp_id ASN _pdbx_struct_conn_angle.ptnr1_label_seq_id 73 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id B _pdbx_struct_conn_angle.ptnr1_auth_comp_id ASN _pdbx_struct_conn_angle.ptnr1_auth_seq_id 405 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id NA _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id D _pdbx_struct_conn_angle.ptnr2_label_comp_id NA _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id B _pdbx_struct_conn_angle.ptnr2_auth_comp_id NA _pdbx_struct_conn_angle.ptnr2_auth_seq_id 602 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id OG _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id B _pdbx_struct_conn_angle.ptnr3_label_comp_id SER _pdbx_struct_conn_angle.ptnr3_label_seq_id 76 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id B _pdbx_struct_conn_angle.ptnr3_auth_comp_id SER _pdbx_struct_conn_angle.ptnr3_auth_seq_id 408 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 97.8 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS B 4 ? CYS B 29 ? CYS B 336 ? 1_555 CYS B 361 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS B 47 ? CYS B 100 ? CYS B 379 ? 1_555 CYS B 432 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 59 ? CYS B 193 ? CYS B 391 ? 1_555 CYS B 525 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 148 ? CYS B 156 ? CYS B 480 ? 1_555 CYS B 488 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN B 22 ? ILE B 26 ? ASN B 354 ILE B 358 AA1 2 ASN B 62 ? ARG B 71 ? ASN B 394 ARG B 403 AA1 3 PRO B 175 ? GLU B 184 ? PRO B 507 GLU B 516 AA1 4 CYS B 100 ? ASN B 105 ? CYS B 432 ASN B 437 AA1 5 ALA B 44 ? CYS B 47 ? ALA B 376 CYS B 379 AA2 1 CYS B 29 ? ALA B 31 ? CYS B 361 ALA B 363 AA2 2 VAL B 192 ? GLY B 194 ? VAL B 524 GLY B 526 AA2 3 CYS B 59 ? PHE B 60 ? CYS B 391 PHE B 392 AA3 1 LEU B 120 ? ARG B 122 ? LEU B 452 ARG B 454 AA3 2 LEU B 160 ? SER B 162 ? LEU B 492 SER B 494 AA4 1 TYR B 141 ? GLN B 142 ? TYR B 473 GLN B 474 AA4 2 CYS B 156 ? TYR B 157 ? CYS B 488 TYR B 489 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE B 26 ? N ILE B 358 O VAL B 63 ? O VAL B 395 AA1 2 3 N ASN B 62 ? N ASN B 394 O GLU B 184 ? O GLU B 516 AA1 3 4 O VAL B 179 ? O VAL B 511 N ILE B 102 ? N ILE B 434 AA1 4 5 O VAL B 101 ? O VAL B 433 N LYS B 46 ? N LYS B 378 AA2 1 2 N ALA B 31 ? N ALA B 363 O CYS B 193 ? O CYS B 525 AA2 2 3 O VAL B 192 ? O VAL B 524 N PHE B 60 ? N PHE B 392 AA3 1 2 N TYR B 121 ? N TYR B 453 O ARG B 161 ? O ARG B 493 AA4 1 2 N TYR B 141 ? N TYR B 473 O TYR B 157 ? O TYR B 489 # _pdbx_entry_details.entry_id 8YDW _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 21 ? ? -114.90 50.21 2 1 ALA B 352 ? ? -109.42 53.45 3 1 TYR B 365 ? ? -91.55 43.36 4 1 PHE B 377 ? ? -161.87 69.83 5 1 ASN B 422 ? ? -129.62 -52.43 6 1 ASP B 428 ? ? -96.82 35.89 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B THR 333 ? B THR 1 2 1 Y 1 B ASN 531 ? B ASN 199 3 1 Y 1 B LEU 532 ? B LEU 200 4 1 Y 1 B TYR 533 ? B TYR 201 5 1 Y 1 B PHE 534 ? B PHE 202 6 1 Y 1 B GLN 535 ? B GLN 203 7 1 Y 1 B GLY 536 ? B GLY 204 8 1 Y 1 B SER 537 ? B SER 205 9 1 Y 1 B HIS 538 ? B HIS 206 10 1 Y 1 B HIS 539 ? B HIS 207 11 1 Y 1 B HIS 540 ? B HIS 208 12 1 Y 1 B HIS 541 ? B HIS 209 13 1 Y 1 B HIS 542 ? B HIS 210 14 1 Y 1 B HIS 543 ? B HIS 211 15 1 Y 1 B HIS 544 ? B HIS 212 16 1 Y 1 B HIS 545 ? B HIS 213 17 1 Y 1 B HIS 546 ? B HIS 214 18 1 Y 1 B HIS 547 ? B HIS 215 19 1 Y 1 B GLY 548 ? B GLY 216 20 1 Y 1 B LEU 549 ? B LEU 217 21 1 Y 1 B ASN 550 ? B ASN 218 22 1 Y 1 B ASP 551 ? B ASP 219 23 1 Y 1 B ILE 552 ? B ILE 220 24 1 Y 1 B PHE 553 ? B PHE 221 25 1 Y 1 B GLU 554 ? B GLU 222 26 1 Y 1 B ALA 555 ? B ALA 223 27 1 Y 1 B GLN 556 ? B GLN 224 28 1 Y 1 B LYS 557 ? B LYS 225 29 1 Y 1 B ILE 558 ? B ILE 226 30 1 Y 1 B GLU 559 ? B GLU 227 31 1 Y 1 B TRP 560 ? B TRP 228 32 1 Y 1 B HIS 561 ? B HIS 229 33 1 Y 1 B GLU 562 ? B GLU 230 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 NA NA NA N N 264 PHE N N N N 265 PHE CA C N S 266 PHE C C N N 267 PHE O O N N 268 PHE CB C N N 269 PHE CG C Y N 270 PHE CD1 C Y N 271 PHE CD2 C Y N 272 PHE CE1 C Y N 273 PHE CE2 C Y N 274 PHE CZ C Y N 275 PHE OXT O N N 276 PHE H H N N 277 PHE H2 H N N 278 PHE HA H N N 279 PHE HB2 H N N 280 PHE HB3 H N N 281 PHE HD1 H N N 282 PHE HD2 H N N 283 PHE HE1 H N N 284 PHE HE2 H N N 285 PHE HZ H N N 286 PHE HXT H N N 287 PRO N N N N 288 PRO CA C N S 289 PRO C C N N 290 PRO O O N N 291 PRO CB C N N 292 PRO CG C N N 293 PRO CD C N N 294 PRO OXT O N N 295 PRO H H N N 296 PRO HA H N N 297 PRO HB2 H N N 298 PRO HB3 H N N 299 PRO HG2 H N N 300 PRO HG3 H N N 301 PRO HD2 H N N 302 PRO HD3 H N N 303 PRO HXT H N N 304 SER N N N N 305 SER CA C N S 306 SER C C N N 307 SER O O N N 308 SER CB C N N 309 SER OG O N N 310 SER OXT O N N 311 SER H H N N 312 SER H2 H N N 313 SER HA H N N 314 SER HB2 H N N 315 SER HB3 H N N 316 SER HG H N N 317 SER HXT H N N 318 THR N N N N 319 THR CA C N S 320 THR C C N N 321 THR O O N N 322 THR CB C N R 323 THR OG1 O N N 324 THR CG2 C N N 325 THR OXT O N N 326 THR H H N N 327 THR H2 H N N 328 THR HA H N N 329 THR HB H N N 330 THR HG1 H N N 331 THR HG21 H N N 332 THR HG22 H N N 333 THR HG23 H N N 334 THR HXT H N N 335 TRP N N N N 336 TRP CA C N S 337 TRP C C N N 338 TRP O O N N 339 TRP CB C N N 340 TRP CG C Y N 341 TRP CD1 C Y N 342 TRP CD2 C Y N 343 TRP NE1 N Y N 344 TRP CE2 C Y N 345 TRP CE3 C Y N 346 TRP CZ2 C Y N 347 TRP CZ3 C Y N 348 TRP CH2 C Y N 349 TRP OXT O N N 350 TRP H H N N 351 TRP H2 H N N 352 TRP HA H N N 353 TRP HB2 H N N 354 TRP HB3 H N N 355 TRP HD1 H N N 356 TRP HE1 H N N 357 TRP HE3 H N N 358 TRP HZ2 H N N 359 TRP HZ3 H N N 360 TRP HH2 H N N 361 TRP HXT H N N 362 TYR N N N N 363 TYR CA C N S 364 TYR C C N N 365 TYR O O N N 366 TYR CB C N N 367 TYR CG C Y N 368 TYR CD1 C Y N 369 TYR CD2 C Y N 370 TYR CE1 C Y N 371 TYR CE2 C Y N 372 TYR CZ C Y N 373 TYR OH O N N 374 TYR OXT O N N 375 TYR H H N N 376 TYR H2 H N N 377 TYR HA H N N 378 TYR HB2 H N N 379 TYR HB3 H N N 380 TYR HD1 H N N 381 TYR HD2 H N N 382 TYR HE1 H N N 383 TYR HE2 H N N 384 TYR HH H N N 385 TYR HXT H N N 386 VAL N N N N 387 VAL CA C N S 388 VAL C C N N 389 VAL O O N N 390 VAL CB C N N 391 VAL CG1 C N N 392 VAL CG2 C N N 393 VAL OXT O N N 394 VAL H H N N 395 VAL H2 H N N 396 VAL HA H N N 397 VAL HB H N N 398 VAL HG11 H N N 399 VAL HG12 H N N 400 VAL HG13 H N N 401 VAL HG21 H N N 402 VAL HG22 H N N 403 VAL HG23 H N N 404 VAL HXT H N N 405 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Agency for Medical Research and Development (AMED)' Japan 'JP21fk0108462, JP21fk0108585, JP21ae0121028, JP18ae0101046' 1 'Japan Society for the Promotion of Science (JSPS)' Japan 20H00451 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7jzu _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 8YDW _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.013376 _atom_sites.fract_transf_matrix[1][2] 0.007723 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015445 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009993 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.3103 20.8439 1.0201 10.2075 1.5888 0.5687 0.8651 51.6512 0.2156 H 1 1 0.4930 10.5109 0.3229 26.1257 0.1402 3.1424 0.0408 57.7997 0.0030 N 7 7 12.2220 0.0057 3.1346 9.8933 2.0141 28.9975 1.1672 0.5826 -11.5379 NA 11 11 4.7659 3.2850 3.1758 8.8422 1.2683 0.3136 1.1136 129.4240 0.7359 O 8 8 3.0487 13.2771 2.2870 5.7011 1.5464 0.3239 0.8671 32.9089 0.2508 S 16 16 6.9054 1.4679 5.2035 22.2151 1.4379 0.2536 1.5863 56.1720 1.0555 # loop_